RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB3C (Homo sapiens)

Ensembl gene IDs: ENSG00000152932

Ensembl transcript IDs: ENST00000282878.6, ENST00000381158.3, ENST00000507977.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGCAGAGCTGAGCAGAGCTGTAGAGGTTGCATTTTCCAGGGAGTaGCAGAAAGGCCACATGGGTGTAGTTGCTCATGTGGCACCCGGA +
Preference number: 1 (lower is better)
Translates to: QAELSRAVEVAFSRE*QKGHMGVVAHVAPG
Trigger: TCCGGGTGCCACATGAGCAACTACACCCATGTGGCCTTTCTGTCACTCCCTGGAAAATGCAACCTCTACAGCTCTGCTCAGCTCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 90 bp CACATGGGTGTAGTTGCTCATGTGGCACCCGGACAGCACACTAAGTaGCTATACACGCAAAGGAACAGAGTTCCGGGTTCTAGTCATGCA +
Preference number: 1 (lower is better)
Translates to: HMGVVAHVAPGQHTK*LYTQRNRVPGSSHA
Trigger: TGCATGACTAGAACCCGGAACTCTGTTCCTTTGCGTGTATAGTCACTTAGTGTGCTGTCCGGGTGCCACATGAGCAACTACACCCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 90 bp TTGACAGATGTAAGTCATGCTCACGTCCCTGAAAGGGCAGGTGTCTaGGGGGCTCAGGTACCATCTGTGTCTGTAAGAACAGCATTCACG +
Preference number: 1 (lower is better)
Translates to: LTDVSHAHVPERAGV*GAQVPSVSVRTAFT
Trigger: CGTGAATGCTGTTCTTACAGACACAGATGGTACCTGAGCCCCTCAGACACCTGCCCTTTCAGGGACGTGAGCATGACTTACATCTGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 90 bp AGAAGTATGGAACCACTTGACAGATGTAAGTCATGCTCACGTCCCTaGAAGGGCAGGTGTCTGAGGGGCTCAGGTACCATCTGTGTCTGT +
Preference number: 1 (lower is better)
Translates to: RSMEPLDRCKSCSRP*KGRCLRGSGTICVC
Trigger: ACAGACACAGATGGTACCTGAGCCCCTCAGACACCTGCCCTTTCAGGGACGTGAGCATGACTTACATCTGTCAAGTGGTTCCATACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR GCA 90 bp TTTATGGGAAACATGGAGCTACAGAAAAATCTCTGGGTACACATCTaGCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCAC +
Preference number: 1 (lower is better)
Translates to: FMGNMELQKNLWVHI*QVALGRTISHGLVH
Trigger: GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTACCCAGAGATTTTTCTGTAGCTCCATGTTTCCCATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 90 bp CACATCCTCACATGTCAATCTCCAGCCAAGCACCATAGAGAGAACTaGAGGTTTTATATGATGAACACATGGCCATGGTCATCTAGAACC +
Preference number: 1 (lower is better)
Translates to: HILTCQSPAKHHREN*RFYMMNTWPWSSRT
Trigger: GGTTCTAGATGACCATGGCCATGTGTTCATCATATAAAACCTTCAGTTCTCTCTATGGTGCTTGGCTGGAGATTGACATGTGAGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 90 bp TTGCCTGATACCTTTGTACAGGCGAGTGAGCGTGTGAGTGACTGTTaGGAAGGGCAGCACTGTATGTGTAATCTAAAAGCAAATATTTCA +
Preference number: 1 (lower is better)
Translates to: LPDTFVQASERVSDC*EGQHCMCNLKANIS
Trigger: TGAAATATTTGCTTTTAGATTACACATACAGTGCTGCCCTTCTCAACAGTCACTCACACGCTCACTCGCCTGTACAAAGGTATCAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR GCA 90 bp AATGTGCCTGGTTCCAAAGGAAGATCTTCATCTGTGCATTTCCAATaGCCTTTATGGGAAACATGGAGCTACAGAAAAATCTCTGGGTAC +
Preference number: 1 (lower is better)
Translates to: NVPGSKGRSSSVHFQ*PLWETWSYRKISGY
Trigger: GTACCCAGAGATTTTTCTGTAGCTCCATGTTTCCCATAAAGGGCATTGGAAATGCACAGATGAAGATCTTCCTTTGGAACCAGGCACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 90 bp AAGGGGGCTTGGACCTTGGAATTCCATAGCTACTCATACCCTTCTTaGTTAAAATGCTTGTTGCATAACTGGCATTCAGTAGATATGTCT +
Preference number: 1 (lower is better)
Translates to: KGAWTLEFHSYSYPS*LKCLLHNWHSVDMS
Trigger: AGACATATCTACTGAATGCCAGTTATGCAACAAGCATTTTAACCAAGAAGGGTATGAGTAGCTATGGAATTCCAAGGTCCAAGCCCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR GCA 90 bp ACACAAGAGCTCCTGTGGACACATGAAGAGTCACAATATTTGCTATaGAGCAGTAGTTTTCAACTAAATGTCGGTCACTATATGAAAGCA +
Preference number: 1 (lower is better)
Translates to: TQELLWTHEESQYLL*SSSFQLNVGHYMKA
Trigger: TGCTTTCATATAGTGACCGACATTTAGTTGAAAACTACTGCTGCATAGCAAATATTGTGACTCTTCATGTGTCCACAGGAGCTCTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 90 bp AAAGAAAGGAAGGTACCAACACCAAAGCTCTTGGAAGAATCGATTTaGAACAGTTCAGGTTTATTCCTAAGGGTATCTAGAGGAGTGAAA +
Preference number: 1 (lower is better)
Translates to: KERKVPTPKLLEESI*NSSGLFLRVSRGVK
Trigger: TTTCACTCCTCTAGATACCCTTAGGAATAAACCTGAACTGTTCCAAATCGATTCTTCCAAGAGCTTTGGTGTTGGTACCTTCCTTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 90 bp GGTTTAGAAATTAGAAAGTATCAGATGTTTCTTGGCAATGACATTTaGGCTATTGTTGCCTGTCTCTCCCCTGACTGGCATAAAATGTTT +
Preference number: 1 (lower is better)
Translates to: GLEIRKYQMFLGNDI*AIVACLSPDWHKMF
Trigger: AAACATTTTATGCCAGTCAGGGGAGAGACAGGCAACAATAGCCCAAATGTCATTGCCAAGAAACATCTGATACTTTCTAATTTCTAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 90 bp ATTGATACAGCAAACAATACCCAAACTTTACTTTTACAAGAAGTATaGAACCACTTGACAGATGTAAGTCATGCTCACGTCCCTGAAAGG +
Preference number: 1 (lower is better)
Translates to: IDTANNTQTLLLQEV*NHLTDVSHAHVPER
Trigger: CCTTTCAGGGACGTGAGCATGACTTACATCTGTCAAGTGGTTCCATACTTCTTGTAAAAGTAAAGTTTGGGTATTGTTTGCTGTATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 90 bp AATGTGAATACACTTCATAGCTTTAAACCCACACAAGAGCTCCTGTaGACACATGAAGAGTCACAATATTTGCTATGCAGCAGTAGTTTT +
Preference number: 1 (lower is better)
Translates to: NVNTLHSFKPTQELL*THEESQYLLCSSSF
Trigger: AAAACTACTGCTGCATAGCAAATATTGTGACTCTTCATGTGTCCACAGGAGCTCTTGTGTGGGTTTAAAGCTATGAAGTGTATTCACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 90 bp TTTGAATGGTTTCAAAGGGCCAGTTTGGCTGTCTTAAGAAAACAATaGTCTATAGCTGATAGCTTTGTCTCTCTTCCATTCAAAGGAAAC +
Preference number: 1 (lower is better)
Translates to: FEWFQRASLAVLRKQ*SIADSFVSLPFKGN
Trigger: GTTTCCTTTGAATGGAAGAGAGACAAAGCTATCAGCTATAGATCATTGTTTTCTTAAGACAGCCAAACTGGCCCTTTGAAACCATTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 90 bp ATCTGTTCAATGATGTTGAATATTCACAGAATTGGGAAGGATCAGTaGAAAAAGCAGTCCTGGGTAGATACTTGCTTATTTAAATGTGTA +
Preference number: 1 (lower is better)
Translates to: ICSMMLNIHRIGKDQ*KKQSWVDTCLFKCV
Trigger: TACACATTTAAATAAGCAAGTATCTACCCAGGACTGCTTTTTCCACTGATCCTTCCCAATTCTGTGAATATTCAACATCATTGAACAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR GCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAGCATGCGGGCATGCGTaGACACACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKACGHA*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCACGCATGCCCGCATGC...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAAGGGGGCTTGGACCTTaGAATTCCATAGCTACTCAT +
Preference number: 2 (lower is better)
Translates to: KMAVFGEASLHPTERGALRGLGP*NSIATH
Trigger: ATGAGTAGCTATGGAATTCCAAGGTCCAAGCCCCCT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGGGAAGGCAAGTCATTaGAAAATAAGGGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHGKASH*KIRGLG
Trigger: TCCAAGCCCCCTTATTTTTCAATGACTTGCCTTCCC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAAACTTAGCTGAGGTTTaGGAAGATGGCCGTGTTTGG +
Preference number: 2 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKNLAEV*EDGRVW
Trigger: CCAAACACGGCCATCTTCTCAAACCTCAGCTAAGTT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR GCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTACTCCCAAGAATTGAATaGGTACGAGCCATTGACATC +
Preference number: 2 (lower is better)
Translates to: KMAVFGEASLHPTERGALLPRIE*VRAIDI
Trigger: GATGTCAATGGCTCGTACGCATTCAATTCTTGGGAG...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAATTGGGAAGGATCAGTaGAAAAAGCAGTCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: KMAVFGEASLHPTERGALIGKDQ*KKQSWV
Trigger: TACCCAGGACTGCTTTTTCCACTGATCCTTCCCAAT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAATTGACACTGTGTAAGTaGGAGCTTGGCTTAGGGCTT +
Preference number: 2 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKLTLCK*ELGLGL
Trigger: AAGCCCTAAGCCAAGCTCCCACTTACACAGTGTCAA...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGATTTTGCATCTCAGTaGAGTTCCAGGCCACCAATT +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHDFASQ*SSRPPI
Trigger: AATTGGTGGCCTGGAACTTCACTGAGATGCAAAATC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAAAAAATAAGGGGGCTTaGACCTTGGAATTCCATAGC +
Preference number: 2 (lower is better)
Translates to: KMAVFGEASLHPTERGALKNKGA*TLEFHS
Trigger: GCTATGGAATTCCAAGGTCCAAGCCCCCTTATTTTT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTCCCACTTATTTTCCTaGCACAATCTCCTCACTACC +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHSHLFS*HNLLTT
Trigger: GGTAGTGAGGAGATTGTGCCAGGAAAATAAGTGGGA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAAGTGAGATTATAGTCTaGTGTCCCAGAAGTAGTCTG +
Preference number: 2 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKSEIIV*CPRSSL
Trigger: CAGACTACTTCTGGGACATCAGACTATAATCTCACT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGATGTTTCTTGGCAATaGCATTTGGGCTATTGTTGC +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHDVSWQ*HLGYCC
Trigger: GCAACAATAGCCCAAATGTCATTGCCAAGAAACATC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGCAGCAACAATGAACTaGTTCATTGTCCTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHAATMN*FIVLKQ
Trigger: TTGCTTCAGGACAATGAATCAGTTCATTGTTGCTGC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAACACAAGCAATTCCTTaGTCATCATTCCTACAAGTG +
Preference number: 2 (lower is better)
Translates to: KMAVFGEASLHPTERGALTQAIP*SSFLQV
Trigger: CACTTGTAGGAATGATGACCAAGGAATTGCTTGTGT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTGTCTCTCCCCTGACTaGCATAAAATGTTTCCACTT +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHCLSPD*HKMFPL
Trigger: AAGTGGAAACATTTTATGCCAGTCAGGGGAGAGACA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAATTACCTACCTCAGCTTaGTATAGCTTGGTAGTTTGG +
Preference number: 2 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKLPTSA*YSLVVW
Trigger: CCAAACTACCAAGCTATACCAAGCTGAGGTAGGTAA...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACATGAACACATGGCCATaGTCATCTAGAACCAACTGT +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHMNTWP*SSRTNC
Trigger: ACAGTTGGTTCTAGATGACCATGGCCATGTGTTCAT...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTaGGTGCACTGGCAAATGTCTAAATCAACTGCCGTAATATGGCAT +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHG*VHWQMSKSTAVIWH
Trigger: ATGCCATATTACGGCAGTTGATTTAGACATTTGCCAGTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAGTGAATAGCATAATTTaGATCAATGGGACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: KMAVFGEASLHPTERGALVNSII*INGTKA
Trigger: GGCTTTTGTCCCATTGATTCAAATTATGCTATTCAC...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAGGCTGTGAAGGAGGATaGGAAGGGTTTCCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKGCEGG*EGFPGF
Trigger: AAAGCCAGGAAACCCTTCTCATCCTCCTTCACAGCC...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGGAAAGCCATCATATTaGTACAGCAAACAATACCCA +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHGKPSY*YSKQYP
Trigger: TGGGTATTGTTTGCTGTATCAATATGATGGCTTTCC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACCAACACCAAAGCTCTTaGAAGAATCGATTTGGAACA +
Preference number: 2 (lower is better)
Translates to: VHICQVALGRTISHGLVHQHQSS*KNRFGT
Trigger: TGTTCCAAATCGATTCTTCCAAGAGCTTTGGTGTTG...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAGCAAATGAAGTCTTGTaGCTTCTTCCTCTGCACGCA +
Preference number: 2 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKANEVL*LLPLHA
Trigger: TGCGTGCAGAGGAAGAAGTCACAAGACTTCATTTGC...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAGAAGATGGCCGTGTTTaGGGAGGCAAGTCTACATCC +
Preference number: 2 (lower is better)
Translates to: LDVCLFHLHPILSWEASLEDGRV*GGKSTS
Trigger: GGATGTAGACTTGCCTCCCCAAACACGGCCATCTTC...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 90 bp TTAGAAAGTATCAGATGTTTCTTGGCAATGACATTTGGGCTATTGTaGCCTGTCTCTCCCCTGACTGGCATAAAATGTTTCCACTTCGGG +
Preference number: 2 (lower is better)
Translates to: LESIRCFLAMTFGLL*PVSPLTGIKCFHFG
Trigger: CCCGAAGTGGAAACATTTTATGCCAGTCAGGGGAGAGACAGGCAACAATAGCCCAAATGTCATTGCCAAGAAACATCTGATACTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 90 bp GCAAACAATACCCAAACTTTACTTTTACAAGAAGTATGGAACCACTaGACAGATGTAAGTCATGCTCACGTCCCTGAAAGGGCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: ANNTQTLLLQEVWNH*TDVSHAHVPERAGV
Trigger: GACACCTGCCCTTTCAGGGACGTGAGCATGACTTACATCTGTCAAGTGGTTCCATACTTCTTGTAAAAGTAAAGTTTGGGTATTGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR GCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTGTGACTTCTTCCTCTaGACGCATGCGGGCATGCGT +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWCDFFL*THAGMR
Trigger: ACGCATGCCCGCATGCGTGCAGAGGAAGAAGTCACA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGCGGACAGGCCAGCTCTaGAGTATGCCACACCAAAAA +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWRTGQL*SMPHQK
Trigger: TTTTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCG...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAATTTTACATCTATGTGTaGGATGAGGGCTGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKFYIYV*DEGCEG
Trigger: TCCTTCACAGCCCTCATCCCACACATAGATGTAAAA...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 90 bp AAACCCACACAAGAGCTCCTGTGGACACATGAAGAGTCACAATATTaGCTATGCAGCAGTAGTTTTCAACTAAATGTCGGTCACTATATG +
Preference number: 2 (lower is better)
Translates to: KPTQELLWTHEESQY*LCSSSFQLNVGHYM
Trigger: CATATAGTGACCGACATTTAGTTGAAAACTACTGCTGCATAGCAAATATTGTGACTCTTCATGTGTCCACAGGAGCTCTTGTGTGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR GCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAATACTATGCTAAGGTTTaGTTTGTAGGGCACCAAAGT +
Preference number: 2 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKYYAKV*FVGHQS
Trigger: ACTTTGGTGCCCTACAAAGCAAACCTTAGCATAGTA...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR GCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGAGCGAAGGTAATCAATaGACACAGGCAGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWSEGNQ*TQAELS
Trigger: GCTCAGCTCTGCCTGTGTGCATTGATTACCTTCGCT...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAACAAATGCTGTTTGTTaGCAACCAGAGCCCCCTGGA +
Preference number: 2 (lower is better)
Translates to: LFIITMPQLSATTEGIVITNAVC*QPEPPG
Trigger: TCCAGGGGGCTCTGGTTGCCAACAAACAGCATTTGT...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 90 bp AAATTAGAAAGTATCAGATGTTTCTTGGCAATGACATTTGGGCTATaGTTGCCTGTCTCTCCCCTGACTGGCATAAAATGTTTCCACTTC +
Preference number: 2 (lower is better)
Translates to: KLESIRCFLAMTFGL*LPVSPLTGIKCFHF
Trigger: GAAGTGGAAACATTTTATGCCAGTCAGGGGAGAGACAGGCAACAATAGCCCAAATGTCATTGCCAAGAAACATCTGATACTTTCTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGGGGTATCTAGAGGAGTaGAAGTGGTCAGGTAATGAG +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWGYLEE*KWSGNE
Trigger: CTCATTACCTGACCACTTTCACTCCTCTAGATACCC...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAATGGAAAAAGCAGTCCTaGGTAGATACTTGCTTATTT +
Preference number: 2 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKWKKQS*VDTCLF
Trigger: AAATAAGCAAGTATCTACCCAGGACTGCTTTTTCCA...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAGTGCATTATGGGGGTTaGGGAAGGCAAGTCATTGAA +
Preference number: 2 (lower is better)
Translates to: LFIITMPQLSATTEGIVIVHYGG*GRQVIE
Trigger: TTCAATGACTTGCCTTCCCCAACCCCCATAATGCAC...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAGTAAAAGAACTTAGCTaGGGTTTGAGAAGATGGCCG +
Preference number: 2 (lower is better)
Translates to: LFIITMPQLSATTEGIVIVKELS*GLRRWP
Trigger: CGGCCATCTTCTCAAACCTCAGCTAAGTTCTTTTAC...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGCTTGGCAATGACATTTaGGCTATTGTTGCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWLGNDI*AIVACL
Trigger: GAGACAGGCAACAATAGCCCAAATGTCATTGCCAAG...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAACCAGTAATGGTTGCTaGTGGGAAGTAAATGGTGAA +
Preference number: 2 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIETSNGC*WEVNGE
Trigger: TTCACCATTTACTTCCCATCAGCAACCATTACTGGT...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGATGCGTACGAGCCATTaGCATCAATTTATTCCTTCA +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWMRTSH*HQFIPS
Trigger: TGAAGGAATAAATTGATGTCAATGGCTCGTACGCAT...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAAATGCTGATTCACTCTaGGGATGGCTATTTAAGTCA +
Preference number: 2 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIENADSL*GWLFKS
Trigger: TGACTTAAATAGCCATCCTCAGAGTGAATCAGCATT...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAACTGATTCATTGTCCTaGAGCAATTCCTCTTATGAG +
Preference number: 2 (lower is better)
Translates to: LFIITMPQLSATTEGIVITDSLS*SNSSYE
Trigger: CTCATAAGAGGAATTGCTTCAGGACAATGAATCAGT...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAACAAACGAAATCAGTGTaGAGAACCGATTTTATGGAC +
Preference number: 2 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEQTKSV*RTDFMD
Trigger: GTCCATAAAATCGGTTCTTCACACTGATTTCGTTTG...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR GCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAACTATCCTTCCAAATCTaGCAAATAATTCCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIELSFQI*QIIPAS
Trigger: GGAAGCAGGAATTATTTGGCAGATTTGGAAGGATAG...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR GCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAGTACATCCTCAACCATaGACTAAGATACATGTTGGA +
Preference number: 2 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEVHPQP*TKIHVG
Trigger: TCCAACATGTATCTTAGTGCATGGTTGAGGATGTAC...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAAACATGGCCACATTCTaGCCCAAGTTACAGAAATAT +
Preference number: 2 (lower is better)
Translates to: LFIITMPQLSATTEGIVINMATF*PKLQKY
Trigger: ATATTTCTGTAACTTGGGCCAGAATGTGGCCATGTT...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGCTATATCATTTAACATaGCCACATTCTGGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWLYHLT*PHSGPS
Trigger: ACTTGGGCCAGAATGTGGCCATGTTAAATGATATAG...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR TCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATATGTGACCTAGTTCTGTaGCTTGTAAGGATTTATTCT +
Preference number: 2 (lower is better)
Translates to: LFIITMPQLSATTEGIVICDLVL*LVRIYS
Trigger: AGAATAAATCCTTACAAGTCACAGAACTAGGTCACA...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTGCTTGTTGCATAACTaGCATTCAGTAGATATGTCT +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWCLLHN*HSVDMS
Trigger: AGACATATCTACTGAATGCCAGTTATGCAACAAGCA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAACATCCAATACTTTCATaGGAAGCCTCTCTATTTTTG +
Preference number: 2 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEHPILS*EASLFL
Trigger: CAAAAATAGAGAGGCTTCCCATGAAAGTATTGGATG...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTTGGAAGAATCGATTTaGAACAGTTCAGGTTTATTC +
Preference number: 2 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWLEESI*NSSGLF
Trigger: GAATAAACCTGAACTGTTCCAAATCGATTCTTCCAA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAGAAAGCTCCCAAGAATaGAATGCGTACGAGCCATTG +
Preference number: 3 (lower is better)
Translates to: KMAVFGEASLHPTERGALESSQE*NAYEPL
Trigger: CAATGGCTCGTACGCATTCAATTCTTGGGAGCTTTC...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACACATTTGGGCTATTGTaGCCTGTCTCTCCCCTGACT +
Preference number: 3 (lower is better)
Translates to: VHICQVALGRTISHGLVHTFGLL*PVSPLT
Trigger: AGTCAGGGGAGAGACAGGCAACAATAGCCCAAATGT...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp GTAGTTGCTCATGTGGCACCCGGACAGCACACTAAGTaGCTATACACGCAAAGGAACAGAGTTCCGGGTTCT +
Preference number: 3 (lower is better)
Translates to: VVAHVAPGQHTK*LYTQRNRVPGS
Trigger: AGAACCCGGAACTCTGTTCCTTTGCGTGTATAGTCACTTAGTGTGCTGTCCGGGTGCCACATGAGCAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp CTGAGCAGAGCTGTAGAGGTTGCATTTTCCAGGGAGTaGCAGAAAGGCCACATGGGTGTAGTTGCTCATGTG +
Preference number: 3 (lower is better)
Translates to: LSRAVEVAFSRE*QKGHMGVVAHV
Trigger: CACATGAGCAACTACACCCATGTGGCCTTTCTGTCACTCCCTGGAAAATGCAACCTCTACAGCTCTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGTGTGTGTGTGTGTGTaGGCCAAAAGGCTGAAAAAC +
Preference number: 3 (lower is better)
Translates to: VHICQVALGRTISHGLVHVCVCV*AKRLKN
Trigger: GTTTTTCAGCCTTTTGGCCAACACACACACACACAC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp GTTTGCCTGATACCTTTGTACAGGCGAGTGAGCGTGTaGGTGACTGTTGAGAAGGGCAGCACTGTATGTGTA +
Preference number: 3 (lower is better)
Translates to: VCLIPLYRRVSV*VTVEKGSTVCV
Trigger: TACACATACAGTGCTGCCCTTCTCAACAGTCACTCACACGCTCACTCGCCTGTACAAAGGTATCAGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAATTAGTTAACCTTGGGTaGGTCCCACCATTTGCCAAA +
Preference number: 3 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKLVNLG*VPPFAK
Trigger: TTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAA...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 72 bp CCCTTTATGGGAAACATGGAGCTACAGAAAAATCTCTaGGTACACATCTGCCAGGTGGCATTAGGTCGGACA +
Preference number: 3 (lower is better)
Translates to: PFMGNMELQKNL*VHICQVALGRT
Trigger: TGTCCGACCTAATGCCACCTGGCAGATGTGTACCCAGAGATTTTTCTGTAGCTCCATGTTTCCCATAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGTAATTCCTGTGATTTaGAAGTTGGTTGCCCCATTA +
Preference number: 3 (lower is better)
Translates to: VHICQVALGRTISHGLVHVIPVI*KLVAPL
Trigger: TAATGGGGCAACCAACTTCAAAATCACAGGAATTAC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp ACCTTTGTACAGGCGAGTGAGCGTGTGAGTGACTGTTaGGAAGGGCAGCACTGTATGTGTAATCTAAAAGCA +
Preference number: 3 (lower is better)
Translates to: TFVQASERVSDC*EGQHCMCNLKA
Trigger: TGCTTTTAGATTACACATACAGTGCTGCCCTTCTCAACAGTCACTCACACGCTCACTCGCCTGTACAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTGGTTAAAATGCTTGTaGCATAACTGGCATTCAGTA +
Preference number: 3 (lower is better)
Translates to: VHICQVALGRTISHGLVHWLKCL*HNWHSV
Trigger: TACTGAATGCCAGTTATGCAACAAGCATTTTAACCA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACAAAAAGTATCAGTGTTaGCCTGATACCTTTGTACAG +
Preference number: 3 (lower is better)
Translates to: VHICQVALGRTISHGLVHKKYQC*PDTFVQ
Trigger: CTGTACAAAGGTATCAGGCAAACACTGATACTTTTT...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 72 bp TCTTCCTCACGGAGACTAAAAGGTAGGGAGCTAAACTaGGGTAATTTGAATGGTTTCAAAGGGCCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: SSSRRLKGRELN*GNLNGFKGPVW
Trigger: CCAAACTGGCCCTTTGAAACCATTCAAATTACCCCAGTTTAGCTCCCTACCTTTTAGTCTCCGTGAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 72 bp GCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTaGCAAATGTCTAAATCAACTGCCGTAATATGGCAT +
Preference number: 3 (lower is better)
Translates to: ALGRTISHGLVH*QMSKSTAVIWH
Trigger: ATGCCATATTACGGCAGTTGATTTAGACATTTGCCAGTGCACCAAACCATGAGAGATTGTCCGACCTAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp ACATGTCAATCTCCAGCCAAGCACCATAGAGAGAACTaGAGGTTTTATATGATGAACACATGGCCATGGTCA +
Preference number: 3 (lower is better)
Translates to: TCQSPAKHHREN*RFYMMNTWPWS
Trigger: TGACCATGGCCATGTGTTCATCATATAAAACCTTCAGTTCTCTCTATGGTGCTTGGCTGGAGATTGACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAATACAAATGCTGTTTGTaGGCAACCAGAGCCCCCTGG +
Preference number: 3 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEYKCCL*ATRAPW
Trigger: CCAGGGGGCTCTGGTTGCCAACAAACAGCATTTGTA...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 72 bp CTGCAAATAGAAAGTTCAATTTGTCCACTAGCTAGATaGTCTGATCTTAACACTCGAGCTCTGAGTGAGGTT +
Preference number: 3 (lower is better)
Translates to: LQIESSICPLAR*SDLNTRALSEV
Trigger: AACCTCACTCAGAGCTCGAGTGTTAAGATCAGACCATCTAGCTAGTGGACAAATTGAACTTTCTATTTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAAAGGGGGCTTGGACCTaGGAATTCCATAGCTACTCA +
Preference number: 3 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEKGAWT*EFHSYS
Trigger: TGAGTAGCTATGGAATTCCAAGGTCCAAGCCCCCTT...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAGGCCAAATTTCCCTGTaGCTCTCTGTACAGCTGGTA +
Preference number: 3 (lower is better)
Translates to: LFIITMPQLSATTEGIVIGQISL*LSVQLV
Trigger: TACCAGCTGTACAGAGAGCAACAGGGAAATTTGGCC...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGATTTACAAATGCTGTTaGTTGGCAACCAGAGCCCCC +
Preference number: 3 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWIYKCC*LATRAP
Trigger: GGGGGCTCTGGTTGCCAACAAACAGCATTTGTAAAT...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp CGTAATATGGCATTAAAGCAATTTGCATATTGTGGCTaGGTCTTGAGCTGCTCAGCACAGAGGAATATGATA +
Preference number: 3 (lower is better)
Translates to: RNMALKQFAYCG*VLSCSAQRNMI
Trigger: TATCATATTCCTCTGTGCTGAGCAGCTCAAGACTCAGCCACAATATGCAAATTGCTTTAATGCCATATTACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR GCA 72 bp CTCCTGTGGACACATGAAGAGTCACAATATTTGCTATaGAGCAGTAGTTTTCAACTAAATGTCGGTCACTAT +
Preference number: 3 (lower is better)
Translates to: LLWTHEESQYLL*SSSFQLNVGHY
Trigger: ATAGTGACCGACATTTAGTTGAAAACTACTGCTGCATAGCAAATATTGTGACTCTTCATGTGTCCACAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 72 bp AAGGTACCAACACCAAAGCTCTTGGAAGAATCGATTTaGAACAGTTCAGGTTTATTCCTAAGGGTATCTAGA +
Preference number: 3 (lower is better)
Translates to: KVPTPKLLEESI*NSSGLFLRVSR
Trigger: TCTAGATACCCTTAGGAATAAACCTGAACTGTTCCAAATCGATTCTTCCAAGAGCTTTGGTGTTGGTACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAAATGCGTACGAGCCATaGACATCAATTTATTCCTTC +
Preference number: 3 (lower is better)
Translates to: LDVCLFHLHPILSWEASLNAYEP*TSIYSF
Trigger: GAAGGAATAAATTGATGTCAATGGCTCGTACGCATT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp TCTTACAGGTCCCCCATTCTCTGTGTTCCTATACCCTaGCATAACCTAGCATTTAGATTATATCTGGATTTT +
Preference number: 3 (lower is better)
Translates to: SYRSPILCVPIP*HNLAFRLYLDF
Trigger: AAAATCCAGATATAATCTAAATGCTAGGTTATGTCAGGGTATAGGAACACAGAGAATGGGGGACCTGTAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp TTTCAAAGGGCCAGTTTGGCTGTCTTAAGAAAACAATaGTCTATAGCTGATAGCTTTGTCTCTCTTCCATTC +
Preference number: 3 (lower is better)
Translates to: FQRASLAVLRKQ*SIADSFVSLPF
Trigger: GAATGGAAGAGAGACAAAGCTATCAGCTATAGATCATTGTTTTCTTAAGACAGCCAAACTGGCCCTTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CCA 72 bp GCAAACAATACCCAAACTTTACTTTTACAAGAAGTATaGAACCACTTGACAGATGTAAGTCATGCTCACGTC +
Preference number: 3 (lower is better)
Translates to: ANNTQTLLLQEV*NHLTDVSHAHV
Trigger: GACGTGAGCATGACTTACATCTGTCAAGTGGTTCCATACTTCTTGTAAAAGTAAAGTTTGGGTATTGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAGAAGTATGGAACCACTaGACAGATGTAAGTCATGCT +
Preference number: 3 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEEVWNH*TDVSHA
Trigger: AGCATGACTTACATCTGTCAAGTGGTTCCATACTTC...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp AATGGGACAAAAGCCAGTTGTAGTGAGATTATAGTCTaGTGTCCCAGAAGTAGTCTGAGAACAAATTTGAAA +
Preference number: 3 (lower is better)
Translates to: NGTKASCSEIIV*CPRSSLRTNLK
Trigger: TTTCAAATTTGTTCTCAGACTACTTCTGGGACATCAGACTATAATCTCACTACAACTGGCTTTTGTCCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR TCA 72 bp CCTTGGTCATCATTCCTACAAGTGAATAGCATAATTTaGATCAATGGGACAAAAGCCAGTTGTAGTGAGATT +
Preference number: 3 (lower is better)
Translates to: PWSSFLQVNSII*INGTKASCSEI
Trigger: AATCTCACTACAACTGGCTTTTGTCCCATTGATTCAAATTATGCTATTCACTTGTAGGAATGATGACCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATATCAACTGGGGACCCTTaGAAATCTGATTTAAATAGC +
Preference number: 3 (lower is better)
Translates to: LFIITMPQLSATTEGIVISTGDP*KSDLNS
Trigger: GCTATTTAAATCAGATTTCAAAGGGTCCCCAGTTGA...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAGTATGCCTGTTTCATTaGCATCCAATACTTTCATGG +
Preference number: 3 (lower is better)
Translates to: LFIITMPQLSATTEGIVIVCLFH*HPILSW
Trigger: CCATGAAAGTATTGGATGCAAATGAAACAGGCATAC...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAATCTCATTTTCTATTCTaGGTCCTGTCATTCCATGAG +
Preference number: 3 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIESHFLF*VLSFHE
Trigger: CTCATGGAATGACAGGACCAAGAATAGAAAATGAGA...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR-3UTR CAA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGAAAGGGAAATATTATTaGACCGGAGTGTCAAGCATT +
Preference number: 3 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWKGKYY*TGVSSI
Trigger: AATGCTTGACACTCCGGTCAAATAATATTTCCCTTT...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAAGAGCCCCCTGGAGCTaGCTGTGTGCACGGGGACAC +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKRAPWS*LCARGH
Trigger: GTGTCCCCGTGCACACAGGCAGCTCCAGGGGGCTCT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAAGGACCGCACTGGTCTaGGCTTCCGGTCAAGCGTGC +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALRTALV*ASGQAC
Trigger: GCACGCTTGACCGGAAGCCCAGACCAGTGCGGTCCT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTATGGGCAGAGGCCATCTaGATGGGCGCTTCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALWAEAI*MGASCL
Trigger: GAGACACGAAGCGCCCATGCAGATGGCCTCTGCCCA...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTACAGGCACAGTTGGGCTaGGGTGGAGGAGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALQAQLG*GGGGVS
Trigger: GGAAACTCCTCCTCCACCGCAGCCCAACTGTGCCTG...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTACCGTACCTGGCATCTTaGGCAGAGGCCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALPYLAS*AEAICM
Trigger: CATGCAGATGGCCTCTGCCCAAGATGCCAGGTACGG...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTACTCGCTCAGTTGAGATaGCCCGCTCGTCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALLAQLR*PARLPC
Trigger: ACATGGAAGACGAGCGGGTCATCTCAACTGAGCGAG...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGCATGCGGGCATGCGTaGACACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHACGHA*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCACGCATGCCCGCATGC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACACACTCTGCACTCTTaGGGTTCGCTAACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKHTLHS*GSLTGS
Trigger: GGAGCCGGTTAGCGAACCCCAAGAGTGCAGAGTGTG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAATTGTGGCTGAGTCTTaGGCTGCTCAGCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALIVAES*AAQHRG
Trigger: TCCTCTGTGCTGAGCAGCTCAAGACTCAGCCACAAT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTGTGACTTCTTCCTCTaGACGCATGCGGGCATGCGT +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHCDFFL*THAGMR
Trigger: ACGCATGCCCGCATGCGTGCAGAGGAAGAAGTCACA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAGAGGAGGAGTTTCCTTaGGTCTCGTGTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALEEEFP*VSCSAL
Trigger: CAAAGCAGAACACGAGACTCAAGGAAACTCCTCCTC...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGCATTTTCCAGGGAGTaGCAGAAAGGCCACATGGGT +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHAFSRE*QKGHMG
Trigger: ACCCATGTGGCCTTTCTGTCACTCCCTGGAAAATGC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACCAATGGAGCCCTCTCTaGCTCTTCCAGTTCTTACAG +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHQWSPL*LFQFLQ
Trigger: CTGTAAGAACTGGAAGAGTCAGAGAGGGCTCCATTG...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTACAGAGCTGTAGAGGTTaGATTTTCCAGGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALQSCRG*IFQGVT
Trigger: TGTCACTCCCTGGAAAATGCAACCTCTACAGCTCTG...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAGTAAAAGAACTTAGCTaGGGTTTGAGAAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALVKELS*GLRRWP
Trigger: CGGCCATCTTCTCAAACCTCAGCTAAGTTCTTTTAC...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAGATTTTGCATCTCAGTaGAGTTCCAGGCCACCAATT +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALDFASQ*SSRPPI
Trigger: AATTGGTGGCCTGGAACTTCACTGAGATGCAAAATC...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAAGGGGGCTTGGACCTTaGAATTCCATAGCTACTCAT +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKRGLGP*NSIATH
Trigger: ATGAGTAGCTATGGAATTCCAAGGTCCAAGCCCCCT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGTGCATTATGGGGGTTaGGGAAGGCAAGTCATTGAA +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHVHYGG*GRQVIE
Trigger: TTCAATGACTTGCCTTCCCCAACCCCCATAATGCAC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAATAAATCCCCCAACTTaGTTTTTCCCTGTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALINPPT*FFPVRG
Trigger: CCCCCTAACAGGGAAAAACCAAGTTGGGGGATTTAT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTATCCCACTTATTTTCCTaGCACAATCTCCTCACTACC +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALSHLFS*HNLLTT
Trigger: GGTAGTGAGGAGATTGTGCCAGGAAAATAAGTGGGA...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAACATTTTGTCGCAGATaGTATCCACAAGGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKTFCRR*YPQGAQ
Trigger: TTGAGCGCCTTGTGGATATCATCTGCGACAAAATGT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAGCAGCAACAATGAACTaGTTCATTGTCCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALAATMN*FIVLKQ
Trigger: TTGCTTCAGGACAATGAATCAGTTCATTGTTGCTGC...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp TGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTaGGTGCACTGGCAAATGTCTAAATCAACTGCCGTA +
Preference number: 4 (lower is better)
Translates to: CQVALGRTISHG*VHWQMSKSTAV
Trigger: TACGGCAGTTGATTTAGACATTTGCCAGTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACAGTGAGATTATAGTCTaGTGTCCCAGAAGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHSEIIV*CPRSSL
Trigger: CAGACTACTTCTGGGACATCAGACTATAATCTCACT...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACAAGCAATTCCTCTTATaGGCATGTAGATGCGATGCT +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHKQFLL*ACRCDA
Trigger: AGCATCGCATCTACATGCTCATAAGAGGAATTGCTT...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAACTGATTCATTGTCCTaGAGCAATTCCTCTTATGAG +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALTDSLS*SNSSYE
Trigger: CTCATAAGAGGAATTGCTTCAGGACAATGAATCAGT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAATCACAATGAACCACTaGTTATGGACTACCATGCTC +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKITMNH*LWTTML
Trigger: GAGCATGGTAGTCCATAATCAGTGGTTCATTGTGAT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAACCAGTGTGGACAACTaGGAATTGAAAGTGAATACA +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALTSVDN*ELKVNT
Trigger: TGTATTCACTTTCAATTCTCAGTTGTCCACACTGGT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGGCTTCCGGTCAAGCGTaGACAGTCCCGGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWASGQA*TVPALH
Trigger: GTGGAGCGCCGGGACTGTGCACGCTTGACCGGAAGC...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTACTATCCTTCCAAATCTaGCAAATAATTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALLSFQI*QIIPAS
Trigger: GGAAGCAGGAATTATTTGGCAGATTTGGAAGGATAG...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAGTACATCCTCAACCATaGACTAAGATACATGTTGGA +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALVHPQP*TKIHVG
Trigger: TCCAACATGTATCTTAGTGCATGGTTGAGGATGTAC...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTTTTACATCTATGTGTaGGATGAGGGCTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHFYIYV*DEGCEG
Trigger: TCCTTCACAGCCCTCATCCCACACATAGATGTAAAA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACAAGGTCCTTCCTTCTaGAAAAGCCATCAGAATATT +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKQGPSF*KSHQNI
Trigger: AATATTCTGATGGCTTTTTCAGAAGGAAGGACCTTG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAAATGCTGATTCACTCTaGGGATGGCTATTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKNADSL*GWLFKS
Trigger: TGACTTAAATAGCCATCCTCAGAGTGAATCAGCATT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAAATTCACCTAAAATATaGAGAACTCCCAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALNSPKI*RTPKSW
Trigger: CCAGCTTTTGGGAGTTCTTCATATTTTAGGTGAATT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACCAAACGAAATCAGTGTaGAGAACCGATTTTATGGAC +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHQTKSV*RTDFMD
Trigger: GTCCATAAAATCGGTTCTTCACACTGATTTCGTTTG...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTACCACAGTGCAGTCACTaGGAAGGGGCCAAATGTGCC +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLPQCSH*EGAKCA
Trigger: GGCACATTTGGCCCCTTCTCAGTGACTGCACTGTGG...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAACTGGAGCTGCCTGTGTaGACGGGGACACTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIELELPV*TGTLAG
Trigger: GCCTGCTAGTGTCCCCGTGCACACAGGCAGCTCCAG...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTCTCTCATGGTTTGGTaGACTGGCAAATGTCTAAAT +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHSLMVW*TGKCLN
Trigger: ATTTAGACATTTGCCAGTGCACCAAACCATGAGAGA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAACACAAGCAATTCCTTaGTCATCATTCCTACAAGTG +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKTQAIP*SSFLQV
Trigger: CACTTGTAGGAATGATGACCAAGGAATTGCTTGTGT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTATGGAAAAAGCAGTCCTaGGTAGATACTTGCTTATTT +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALWKKQS*VDTCLF
Trigger: AAATAAGCAAGTATCTACCCAGGACTGCTTTTTCCA...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAGAAGATGGCCGTGTTTaGGGAGGCAAGTCTACATCC +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKEDGRV*GGKSTS
Trigger: GGATGTAGACTTGCCTCCCCAAACACGGCCATCTTC...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACAACATGGCCACATTCTaGCCCAAGTTACAGAAATAT +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHNMATF*PKLQKY
Trigger: ATATTTCTGTAACTTGGGCCAGAATGTGGCCATGTT...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACTCATTTTCTATTCTTaGTCCTGTCATTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKLIFYS*SCHSMR
Trigger: CCTCATGGAATGACAGGACCAAGAATAGAAAATGAG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAAAATATTGCACTTATTaGCCCATGAACCCTCAATTC +
Preference number: 4 (lower is better)
Translates to: KMAVFGEASLHPTERGALKYCTY*PMNPQF
Trigger: GAATTGAGGGTTCATGGGCCAATAAGTGCAATATTT...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACCCAAGAGTATGTTTTaGTTTGAGTTGACCAATCTT +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKPKSMF*FELTNL
Trigger: AAGATTGGTCAACTCAAATCAAAACATACTCTTGGG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTATTGACCTCGCTCAGTTaGGATGACCCGCTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLLTSLS*DDPLVF
Trigger: GAAGACGAGCGGGTCATCTCAACTGAGCGAGGTCAA...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAACTTTCTGCTACAACTaGAGGCATTGTCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKTFCYN*RHCHSF
Trigger: AAAACTATGACAATGCCTTCAGTTGTAGCAGAAAGT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACACCATAGAGAGAACTaGAGGTTTTATATGATGAAC +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKHHREN*RFYMMN
Trigger: GTTCATCATATAAAACCTTCAGTTCTCTCTATGGTG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTACCACATGGGTGTAGTTaGTCATGTGGCACCCGGACA +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLPHGCS*SCGTRT
Trigger: TGTCCGGGTGCCACATGAGCAACTACACCCATGTGG...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGGGATAATGAGACAATaGATGGAAAGCCATCATATT +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHGIMRQ*MESHHI
Trigger: AATATGATGGCTTTCCATGCATTGTCTCATTATCCC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAATGGCTAGGACCGCACTaGTCTGGGCTTCCGGTCAAG +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEWLGPH*SGLPVK
Trigger: CTTGACCGGAAGCCCAGACCAGTGCGGTCCTAGCCA...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAACTAGCAGGCACAGTTaGGCTGCGGTGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVITSRHS*AAVEEE
Trigger: CTCCTCCTCCACCGCAGCCCAACTGTGCCTGCTAGT...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACCTTTATGGGAAACATaGAGCTACAGAAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKPLWET*SYRKIS
Trigger: AGAGATTTTTCTGTAGCTCCATGTTTCCCATAAAGG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAGGGTATCTAGAGGAGTaGAAGTGGTCAGGTAATGAG +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKGYLEE*KWSGNE
Trigger: CTCATTACCTGACCACTTTCACTCCTCTAGATACCC...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTACGGACAGGCCAGCTCTaGAGTATGCCACACCAAAAA +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLRTGQL*SMPHQK
Trigger: TTTTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCG...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAGAAAGGGCAGGTGTCTaGGGGGCTCAGGTACCATCT +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEERAGV*GAQVPS
Trigger: AGATGGTACCTGAGCCCCTCAGACACCTGCCCTTTC...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAGTATCTTTCCTGGCCTaGTGTGTCCCAAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKVSFLA*CVPNLK
Trigger: CTTCAGATTTGGGACACAGCAGGCCAGGAAAGATAC...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAAAGAGTCACAATATTTaGTATGCAGCAGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKKSHNI*YAAVVF
Trigger: GAAAACTACTGCTGCATAGCAAATATTGTGACTCTT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAACTTTCTGGCCGTACCTaGCATCTTGGGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIELSGRT*HLGQRP
Trigger: TGGCCTCTGCCCAAGATGCCAGGTACGGCCAGAAAG...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTTGGAAGAATCGATTTaGAACAGTTCAGGTTTATTC +
Preference number: 4 (lower is better)
Translates to: VHICQVALGRTISHGLVHLEESI*NSSGLF
Trigger: GAATAAACCTGAACTGTTCCAAATCGATTCTTCCAA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACACACAGTAACTTTTTaGTCTAGAAGGGTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKHTVTF*SRRVLV
Trigger: AACTAAAACCCTTCTAGACCAAAAAGTTACTGTGTG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACTTTTACAAGAAGTATaGAACCACTTGACAGATGTA +
Preference number: 4 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKLLQEV*NHLTDV
Trigger: TACATCTGTCAAGTGGTTCCATACTTCTTGTAAAAG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAATGTTCTCCTAAATGTTaGCCTCGCTCAGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKCSPKC*PRSVEM
Trigger: CATCTCAACTGAGCGAGGTCAACATTTAGGAGAACA...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAGCACTTATTGGCCCATaGACCCTCAATTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLALIGP*TLNSEV
Trigger: CACCTCAGAATTGAGGGTTCATGGGCCAATAAGTGC...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAACAGAGGCCATCTGCATaGGCGCTTCGTGTCTCATTG +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEQRPSA*ALRVSL
Trigger: CAATGAGACACGAAGCGCCCATGCAGATGGCCTCTG...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAACACAAGAGCTCCTGTaGACACATGAAGAGTCACAA +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKTQELL*THEESQ
Trigger: TTGTGACTCTTCATGTGTCCACAGGAGCTCTTGTGT...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp GAAGGCAAGTCATTGAAAAATAAGGGGGCTTGGACCTaGGAATTCCATAGCTACTCATACCCTTCTTGGTTA +
Preference number: 4 (lower is better)
Translates to: EGKSLKNKGAWT*EFHSYSYPSWL
Trigger: TAACCAAGAAGGGTATGAGTAGCTATGGAATTCCAAGGTCCAAGCCCCCTTATTTTTCAATGACTTGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp ATCAGATGTTTCTTGGCAATGACATTTGGGCTATTGTaGCCTGTCTCTCCCCTGACTGGCATAAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: IRCFLAMTFGLL*PVSPLTGIKCF
Trigger: GAAACATTTTATGCCAGTCAGGGGAGAGACAGGCAACAATAGCCCAAATGTCATTGCCAAGAAACATCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAAACTTAGCTGAGGTTTaGGAAGATGGCCGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLNLAEV*EDGRVW
Trigger: CCAAACACGGCCATCTTCTCAAACCTCAGCTAAGTT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGGGCTGTGAAGGAGGATaGGAAGGGTTTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWGCEGG*EGFPGF
Trigger: AAAGCCAGGAAACCCTTCTCATCCTCCTTCACAGCC...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGCCACTTCGGGATGTTTaGCACTGTGTAAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWPLRDV*HCVSGS
Trigger: GCTCCCACTTACACAGTGTCAAACATCCCGAAGTGG...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATATCAGAGGAGTCTTTCTaGCCGTACCTGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVISEESF*PYLASW
Trigger: CCAAGATGCCAGGTACGGCCAGAAAGACTCCTCTGA...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGGTTCATCAAGGCAGTTaGAGCTGTTCACTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWVHQGS*SCSLGA
Trigger: TGCCCCCAGTGAACAGCTCCAACTGCCTTGATGAAC...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAATTACCTACCTCAGCTTaGTATAGCTTGGTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKLPTSA*YSLVVW
Trigger: CCAAACTACCAAGCTATACCAAGCTGAGGTAGGTAA...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp TCAATGCCAATGAAAGCCCACTTAGTTAACCTTGGGTaGGTCCCACCATTTGCCAAATTTGATGTTAAAACC +
Preference number: 4 (lower is better)
Translates to: SMPMKAHLVNLG*VPPFAKFDVKT
Trigger: GGTTTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGCTTTCATTGGCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp ACCCAAACTTTACTTTTACAAGAAGTATGGAACCACTaGACAGATGTAAGTCATGCTCACGTCCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: TQTLLLQEVWNH*TDVSHAHVPER
Trigger: CCTTTCAGGGACGTGAGCATGACTTACATCTGTCAAGTGGTTCCATACTTCTTGTAAAAGTAAAGTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp ATAGCTTTTCGTTATCTAGCAACTAGGCTTCAGTTCTaGATTTTGCATCTCAGTGAAGTTCCAGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: IAFRYLATRLQF*ILHLSEVPGHQ
Trigger: TTGGTGGCCTGGAACTTCACTGAGATGCAAAATCAAGAACTGAAGCCTAGTTGCTAGATAACGAAAAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAAGTAGACATGTCATGTaGTCAACCTTTCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKSRHVM*STFLRR
Trigger: TCTTCTCAGAAAGGTTGATCACATGACATGTCTACT...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATATCTCGTGTTCTGCTTTaGAGCAGTGATGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVISRVLL*SSDGRI
Trigger: GATCCTGCCATCACTGCTGCAAAGCAGAACACGAGA...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGAATGTCCTTTCTCTCTaGCTAGGACCGCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWNVLSL*LGPHWS
Trigger: AGACCAGTGCGGTCCTAGCCAGAGAGAAAGGACATT...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGGTCCTGTATCTTTCCTaGCCTGCTGTGTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWVLYLS*PAVSQI
Trigger: GATTTGGGACACAGCAGGCCAGGAAAGATACAGGAC...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAACAAATGCTGTTTGTTaGCAACCAGAGCCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIETNAVC*QPEPPG
Trigger: TCCAGGGGGCTCTGGTTGCCAACAAACAGCATTTGT...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTACTTGGCAATGACATTTaGGCTATTGTTGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLLGNDI*AIVACL
Trigger: GAGACAGGCAACAATAGCCCAAATGTCATTGCCAAG...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAATATATGATGAACACATaGCCATGGTCATCTAGAACC +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKYMMNT*PWSSRT
Trigger: GGTTCTAGATGACCATGGCCATGTGTTCATCATATA...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAGCAATTTGCATATTGTaGCTGAGTCTTGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLAICIL*LSLELL
Trigger: GAGCAGCTCAAGACTCAGCCACAATATGCAAATTGC...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAACATGGTTTGGTGCACTaGCAAATGTCTAAATCAACT +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKHGLVH*QMSKST
Trigger: AGTTGATTTAGACATTTGCCAGTGCACCAAACCATG...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGGCAAATGAAGTCTTGTaGCTTCTTCCTCTGCACGCA +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWANEVL*LLPLHA
Trigger: TGCGTGCAGAGGAAGAAGTCACAAGACTTCATTTGC...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGGGGAAGGCAAGTCATTaGAAAATAAGGGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWGKASH*KIRGLG
Trigger: TCCAAGCCCCCTTATTTTTCAATGACTTGCCTTCCC...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAGGACAGCACACTAAGTaGCTATACACGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEGQHTK*LYTQRN
Trigger: GTTCCTTTGCGTGTATAGTCACTTAGTGTGCTGTCC...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAGTATCAGTGTTTGCCTaGTACCTTTGTACAGGCGAG +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEVSVFA*YLCTGE
Trigger: CTCGCCTGTACAAAGGTATCAGGCAAACACTGATAC...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAACTTACTCCACTAACTaGATGAAAAGGCAAAGTACA +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKTYSTN*MKRQST
Trigger: TGTACTTTGCCTTTTCATTCAGTTAGTGGAGTAAGT...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTTTGCATATTGTGGCTaGGTCTTGAGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWFAYCG*VLSCSA
Trigger: TGCTGAGCAGCTCAAGACTCAGCCACAATATGCAAA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAAACTGTGCTGACGAATaGAGATGTAAAGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLNCADE*RCKGVI
Trigger: GATGACTCCTTTACATCTGCATTCGTCAGCACAGTT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTTGAGTCTCGTGTTCTaGTTTGCAGCAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWLSLVF*FAAVMA
Trigger: TGCCATCACTGCTGCAAAGCAGAACACGAGACTCAA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTATCACAGTTTTTCACATaGAGGTGTTACCTACCTCAG +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLSQFFT*RCYLPQ
Trigger: CTGAGGTAGGTAACACCTGCATGTGAAAAACTGTGA...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTATCTGTGCATTTCCAATaGCCTTTATGGGAAACATGG +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLSVHFQ*PLWETW
Trigger: CCATGTTTCCCATAAAGGGCATTGGAAATGCACAGA...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTTGACACTGTGTAAGTaGGAGCTTGGCTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWLTLCK*ELGLGL
Trigger: AAGCCCTAAGCCAAGCTCCCACTTACACAGTGTCAA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTATGTCTCTCCCCTGACTaGCATAAAATGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLCLSPD*HKMFPL
Trigger: AAGTGGAAACATTTTATGCCAGTCAGGGGAGAGACA...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAAGAACTGAGAATCAATaGAAAAGGCCTCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLRTENQ*KRPHFH
Trigger: ATGGAAGTGAGGCCTTTTTCATTGATTCTCAGTTCT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTATTCCTAAGGGTTTCATaGCTTACTCCACTAACTGAA +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLFLRVS*LTPLTE
Trigger: TTCAGTTAGTGGAGTAAGTCATGAAACCCTTAGGAA...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATACTCCCAAGAATTGAATaGGTACGAGCCATTGACATC +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVILPRIE*VRAIDI
Trigger: GATGTCAATGGCTCGTACGCATTCAATTCTTGGGAG...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAAGCAGAGCAAAACTCTaGTCTTTCACTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKSRAKL*SFTFKY
Trigger: GTATTTAAAAGTGAAAGAGCAGAGTTTTGCTCTGCT...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAATTGGGAAGGATCAGTaGAAAAAGCAGTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEIGKDQ*KKQSWV
Trigger: TACCCAGGACTGCTTTTTCCACTGATCCTTCCCAAT...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTCGGACAATCTCTCATaGTTTGGTGCACTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWSDNLS*FGALAN
Trigger: ATTTGCCAGTGCACCAAACCATGAGAGATTGTCCGA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTATGTGACCTAGTTCTGTaGCTTGTAAGGATTTATTCT +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLCDLVL*LVRIYS
Trigger: AGAATAAATCCTTACAAGTCACAGAACTAGGTCACA...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAGATGTTTCTTGGCAATaGCATTTGGGCTATTGTTGC +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVIDVSWQ*HLGYCC
Trigger: GCAACAATAGCCCAAATGTCATTGCCAAGAAACATC...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGCACTCGAGCTCTGAGTaGGGTTTTAAAATGACTCAT +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWHSSSE*GFKMTH
Trigger: ATGAGTCATTTTAAAACCTCACTCAGAGCTCGAGTG...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGACCAGTAATGGTTGCTaGTGGGAAGTAAATGGTGAA +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWTSNGC*WEVNGE
Trigger: TTCACCATTTACTTCCCATCAGCAACCATTACTGGT...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAATTAACACAGGTGAATaGAATACACAGGTAACCTCA +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLINTGE*NTQVTS
Trigger: TGAGGTTACCTGTGTATTTCATTCACCTGTGTTAAT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTTACCCACCTTCACTTaGCTTCTTCAGTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWLPTFT*LLQWIL
Trigger: CAAAATCCACTGAAGAAGTCAAGTGAAGGTGGGTAA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGAAAAATAAGGGGGCTTaGACCTTGGAATTCCATAGC +
Preference number: 4 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWKNKGA*TLEFHS
Trigger: GCTATGGAATTCCAAGGTCCAAGCCCCCTTATTTTT...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAATTAGAATGCTCCAGTaGTTTCCTCCCTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LDVCLFHLHPILSWEASLIRMLQ*FPPSFK
Trigger: TTTAAAAGAGGGAGGAAACCACTGGAGCATTCTAAT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATATGTCCACTAGCTAGATaGTCTGATCTTAACACTCGA +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVICPLAR*SDLNTR
Trigger: TCGAGTGTTAAGATCAGACCATCTAGCTAGTGGACA...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAATGAACACATGGCCATaGTCATCTAGAACCAACTGT +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEMNTWP*SSRTNC
Trigger: ACAGTTGGTTCTAGATGACCATGGCCATGTGTTCAT...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATATTCCAATGCCCTTTATaGGAAACATGGAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVIFQCPL*ETWSYR
Trigger: TCTGTAGCTCCATGTTTCCCATAAAGGGCATTGGAA...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp TATTTGCCACATATTAAACAGGAAAGCTCCCAAGAATaGAATGCGTACGAGCCATTGACATCAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: YLPHIKQESSQE*NAYEPLTSIYS
Trigger: GGAATAAATTGATGTCAATGGCTCGTACGCATTCAATTCTTGGGAGCTTTCCTGTTTAATATGTGGCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp CATAGCTACTCATACCCTTCTTGGTTAAAATGCTTGTaGCATAACTGGCATTCAGTAGATATGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: HSYSYPSWLKCL*HNWHSVDMSQS
Trigger: AGATTGAGACATATCTACTGAATGCCAGTTATGCAACAAGCATTTTAACCAAGAAGGGTATGAGTAGCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAATGCGTACGAGCCATTaGCATCAATTTATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVIMRTSH*HQFIPS
Trigger: TGAAGGAATAAATTGATGTCAATGGCTCGTACGCAT...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATACAAGTAATGACTGTTTaGAACTCCACCAGTAATGGT +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVIQVMTV*NSTSNG
Trigger: ACCATTACTGGTGGAGTTTCAAACAGTCATTACTTG...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATACTATATCATTTAACATaGCCACATTCTGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVILYHLT*PHSGPS
Trigger: ACTTGGGCCAGAATGTGGCCATGTTAAATGATATAG...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR TCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAGTGAATAGCATAATTTaGATCAATGGGACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEVNSII*INGTKA
Trigger: GGCTTTTGTCCCATTGATTCAAATTATGCTATTCAC...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR GCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAATATGCCTGTTTCATTTaGATCCAATACTTTCATGGG +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEYACFI*IQYFHG
Trigger: CCCATGAAAGTATTGGATGCAAATGAAACAGGCATA...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAATGCTTGTTGCATAACTaGCATTCAGTAGATATGTCT +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIECLLHN*HSVDMS
Trigger: AGACATATCTACTGAATGCCAGTTATGCAACAAGCA...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATACATCCAATACTTTCATaGGAAGCCTCTCTATTTTTG +
Preference number: 4 (lower is better)
Translates to: LFIITMPQLSATTEGIVIHPILS*EASLFL
Trigger: CAAAAATAGAGAGGCTTCCCATGAAAGTATTGGATG...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CCA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAATCCACTCTCTCTGTTTaGAGGAAATTAATTACATGC +
Preference number: 4 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIESTLSV*RKLITC
Trigger: GCATGTAATTAATTTCCTCCAAACAGAGAGAGTGGA...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp GCATTCAGTAGATATGTCTCAATCTGTTCAATGATGTaGAATATTCACAGAATTGGGAAGGATCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: AFSRYVSICSMM*NIHRIGKDQWK
Trigger: TTTCCACTGATCCTTCCCAATTCTGTGAATATTCAACATCATTGAACAGATTGAGACATATCTACTGAATGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp TCTCCAAAGATATCTTTAGATGTATGCCTGTTTCATTaGCATCCAATACTTTCATGGGAAGCCTCTCTATTT +
Preference number: 4 (lower is better)
Translates to: SPKISLDVCLFH*HPILSWEASLF
Trigger: AAATAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAAAGATATCTTTGGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
3UTR CAA 72 bp CCACTGATTATGGACTACCATGCTCTAAAATTAATGTaGCTTCATGGAAGTTCAGTTAATAGTGGAATGTAT +
Preference number: 4 (lower is better)
Translates to: PLIMDYHALKLM*LHGSSVNSGMY
Trigger: ATACATTCCACTATTAACTGAACTTCCATGAAGCAACATTAATTTTAGAGCATGGTAGTCCATAATCAGTGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS GCA 90 bp TTCTCTCTGGCTAGGACCGCACTGGTCTGGGCTTCCGGTCAAGCGTaGACAGTCCCGGCGCTCCACGCTCCACACTCTGCACTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: FSLARTALVWASGQA*TVPALHAPHSALLG
Trigger: CCCCAAGAGTGCAGAGTGTGGAGCGTGGAGCGCCGGGACTGTGCACGCTTGACCGGAAGCCCAGACCAGTGCGGTCCTAGCCAGAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS CCA 90 bp ATTGTTGGCAAATGTCCTTTCTCTCTGGCTAGGACCGCACTGGTCTaGGCTTCCGGTCAAGCGTGCACAGTCCCGGCGCTCCACGCTCCA +
Preference number: 5 (lower is better)
Translates to: IVGKCPFSLARTALV*ASGQACTVPALHAP
Trigger: TGGAGCGTGGAGCGCCGGGACTGTGCACGCTTGACCGGAAGCCCAGACCAGTGCGGTCCTAGCCAGAGAGAAAGGACATTTGCCAACAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS CCA 90 bp GTCTCATTGTTGGCAAATGTCCTTTCTCTCTGGCTAGGACCGCACTaGTCTGGGCTTCCGGTCAAGCGTGCACAGTCCCGGCGCTCCACG +
Preference number: 5 (lower is better)
Translates to: VSLLANVLSLWLGPH*SGLPVKRAQSRRST
Trigger: CGTGGAGCGCCGGGACTGTGCACGCTTGACCGGAAGCCCAGACCAGTGCGGTCCTAGCCAGAGAGAAAGGACATTTGCCAACAATGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS CCA 90 bp CTGCCTGTGTGCACGGGGACACTAGCAGGCACAGTTGGGCTGCGGTaGAGGAGGAGTTTCCTTGAGTCTCGTGTTCTGCTTTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LPVCTGTLAGTVGLR*RRSFLESRVLLCSS
Trigger: ACTGCTGCAAAGCAGAACACGAGACTCAAGGAAACTCCTCCTCCACCGCAGCCCAACTGTGCCTGCTAGTGTCCCCGTGCACACAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282878.6
ENST00000381158.3
CDS-3UTR CAA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTAGGAGGAGGAGTTTCCTaGAGTCTCGTGTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: KMAVFGEASLHPTERGALGGGVS*SLVFCF
Trigger: AAAGCAGAACACGAGACTCAAGGAAACTCCTCCTCC...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAGTTTGCCTGATACCTTaGTACAGGCGAGTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKVCLIP*YRRVSV
Trigger: CACGCTCACTCGCCTGTACAAAGGTATCAGGCAAAC...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAAAGGGGGCTTGGACCTaGGAATTCCATAGCTACTCA +
Preference number: 5 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKKGAWT*EFHSYS
Trigger: TGAGTAGCTATGGAATTCCAAGGTCCAAGCCCCCTT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS GCA 90 bp GTGAGGCTGCCTGAAGGCACGGACTGTCAGCCAAAGTATAGATCATaGAGGCACGGGGCTAGGCATCTTACACAAATTATGCCATCAAAT +
Preference number: 5 (lower is better)
Translates to: VRLPEGTDCQPKYRS*RHGARHLTQIMPSN
Trigger: ATTTGATGGCATAATTTGTGTAAGATGCCTAGCCCCGTGCCTGCATGATCTATACTTTGGCTGACAGTCCGTGCCTTCAGGCAGCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507977.1
CDS-3UTR CAA 90 bp AAGATGGCCGTGTTTGGGGAGGCAAGTCTACATCCTACGGAAAGAGGAGCCCTACCAACACCAAAGCTCTaGGAAGAATCGATTTGGAAC +
Preference number: 5 (lower is better)
Translates to: KMAVFGEASLHPTERGALPTPKL*EESIWN
Trigger: GTTCCAAATCGATTCTTCCAAGAGCTTTGGTGTTGG...TAGGGCTCCTCTTTCCGTAGGATGTAGACTTGCCTCCCCAAACACGGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS GCA 90 bp GTTGGCACCAGGGAGCAGGATAAGTTGTCCATACCAAATCCTGGATaGAACGCAATACTGTCTGTTCTCAGATATTCTTGTGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VGTREQDKLSIPNPG*NAILSVLRYSCEAA
Trigger: GGCAGCCTCACAAGAATATCTGAGAACAGACAGTATTGCGTTGCATCCAGGATTTGGTATGGACAACTTATCCTGCTCCCTGGTGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507977.1
CDS-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACGAAGTATGGAACCACTaGACAGATGTAAGTCATGCT +
Preference number: 5 (lower is better)
Translates to: VHICQVALGRTISHGLVHEVWNH*TDVSHA
Trigger: AGCATGACTTACATCTGTCAAGTGGTTCCATACTTC...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAACTAAACTGGGGTAATTaGAATGGTTTCAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKLNWGN*NGFKGP
Trigger: TGGCCCTTTGAAACCATTCAAATTACCCCAGTTTAG...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAATACAAATGCTGTTTGTaGGCAACCAGAGCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKYKCCL*ATRAPW
Trigger: CCAGGGGGCTCTGGTTGCCAACAAACAGCATTTGTA...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTCAACTGGGGACCCTTaGAAATCTGATTTAAATAGC +
Preference number: 5 (lower is better)
Translates to: VHICQVALGRTISHGLVHSTGDP*KSDLNS
Trigger: GCTATTTAAATCAGATTTCAAAGGGTCCCCAGTTGA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTCTCATTTTCTATTCTaGGTCCTGTCATTCCATGAG +
Preference number: 5 (lower is better)
Translates to: VHICQVALGRTISHGLVHSHFLF*VLSFHE
Trigger: CTCATGGAATGACAGGACCAAGAATAGAAAATGAGA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACTGGAAAGCCATCATATaGATACAGCAAACAATACCC +
Preference number: 5 (lower is better)
Translates to: VHICQVALGRTISHGLVHWKAII*IQQTIP
Trigger: GGGTATTGTTTGCTGTATCAATATGATGGCTTTCCA...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACCTTCAGTTCTTGATTTaGCATCTCAGTGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: VHICQVALGRTISHGLVHLQFLI*HLSEVP
Trigger: TGGAACTTCACTGAGATGCAAAATCAAGAACTGAAG...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS TCA 90 bp AAATCCTGGATGCAACGCAATACTGTCTGTTCTCAGATATTCTTGTaGGGCTGCCTGAAGGCACGGACTGTCAGCCAAAGTATAGATCAT +
Preference number: 5 (lower is better)
Translates to: KSWMQRNTVCSQIFL*GCLKARTVSQSIDH
Trigger: ATGATCTATACTTTGGCTGACAGTCCGTGCCTTCAGGCAGCCTCACAAGAATATCTGAGAACAGACAGTATTGCGTTGCATCCAGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507977.1
CDS-3UTR CAA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGCCACACTCTGCACTCTaGGGGTTCGCTAACCGGCTC +
Preference number: 5 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWPHSAL*GFANRL
Trigger: GAGCCGGTTAGCGAACCCCAAGAGTGCAGAGTGTGG...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GTACACATCTGCCAGGTGGCATTAGGTCGGACAATCTCTCATGGTTTGGTGCACCACCATTTGCCAAATTaGATGTTAAAACCCGGATTT +
Preference number: 5 (lower is better)
Translates to: VHICQVALGRTISHGLVHHHLPN*MLKPGF
Trigger: AAATCCGGGTTTTAACATCAAATTTGGCAAATGGTG...GTGCACCAAACCATGAGAGATTGTCCGACCTAATGCCACCTGGCAGATGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAAAAGGGAAATATTATTaGACCGGAGTGTCAAGCATT +
Preference number: 5 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKKGKYY*TGVSSI
Trigger: AATGCTTGACACTCCGGTCAAATAATATTTCCCTTT...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GAGAGAAAGGGTTCTTCAGACGGACAGGCCAGCTCTGAAGTATGCCACACCAAAGAAGAGTCACAATATTaGCTATGCAGCAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: ERKGSSDGQASSEVCHTKEESQY*LCSSSF
Trigger: AAAACTACTGCTGCATAGCAAATATTGTGACTCTTC...TTTGGTGTGGCATACTTCAGAGCTGGCCTGTCCGTCTGAAGAACCCTTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAAGAAGATGGCCGTGTTaGGGGAGGCAAGTCTACATC +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLRRWPC*GRQVYI
Trigger: GATGTAGACTTGCCTCCCCAAACACGGCCATCTTCT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAGGCCAAATTTCCCTGTaGCTCTCTGTACAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLGQISL*LSVQLV
Trigger: TACCAGCTGTACAGAGAGCAACAGGGAAATTTGGCC...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAACATTTGGGCTATTGTaGCCTGTCTCTCCCCTGACT +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLTFGLL*PVSPLT
Trigger: AGTCAGGGGAGAGACAGGCAACAATAGCCCAAATGT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAATGACATTTGGGCTATaGTTGCCTGTCTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLMTFGL*LPVSPL
Trigger: CAGGGGAGAGACAGGCAACAATAGCCCAAATGTCAT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAGTGTGTGTGTGTGTGTaGGCCAAAAGGCTGAAAAAC +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLVCVCV*AKRLKN
Trigger: GTTTTTCAGCCTTTTGGCCAACACACACACACACAC...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAAAAAGCAATTTGCATATaGTGGCTGAGTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKKAICI*WLSLEL
Trigger: CAGCTCAAGACTCAGCCACAATATGCAAATTGCTTT...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGTCCACTTCGGGATGTTaGACACTGTGTAAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWSTSGC*TLCKWE
Trigger: CTCCCACTTACACAGTGTCAAACATCCCGAAGTGGA...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAACAGCCAACTCTCACTaGTCCACGATGAAGGAAATA +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLTANSH*STMKEI
Trigger: TATTTCCTTCATCGTGGACAAGTGAGAGTTGGCTGT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp GCCCACTTAGTTAACCTTGGGTTGGTCCCACCATTTGCCAAATTTGATGTTAAATTTCAAAGGGCCAGTTaGGCTGTCTTAAGAAAACAA +
Preference number: 5 (lower is better)
Translates to: AHLVNLGLVPPFAKFDVKFQRAS*AVLRKQ
Trigger: TTGTTTTCTTAAGACAGCCAAACTGGCCCTTTGAAA...TTTAACATCAAATTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAAGTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAACAATCTCTCATGGTTaGGTGCACTGGCAAATGTCT +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLTISHG*VHWQMS
Trigger: AGACATTTGCCAGTGCACCAAACCATGAGAGATTGT...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGGCGCTTCGTGTCTCATaGTTGGCAAATGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWALRVS*LANVLS
Trigger: AGAAAGGACATTTGCCAACAATGAGACACGAAGCGC...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAGAAAGCTCCCAAGAATaGAATGCGTACGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEESSQE*NAYEPL
Trigger: CAATGGCTCGTACGCATTCAATTCTTGGGAGCTTTC...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATACTTCGTGTCTCATTGTaGGCAAATGTCCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LFIITMPQLSATTEGIVILRVSL*ANVLSL
Trigger: GAGAGAAAGGACATTTGCCAACAATGAGACACGAAG...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTAGTATGCCTGTTTCATTaGCATCCAATACTTTCATGG +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLVCLFH*HPILSW
Trigger: CCATGAAAGTATTGGATGCAAATGAAACAGGCATAC...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATATTAGTTAACCTTGGGTaGGTCCCACCATTTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LFIITMPQLSATTEGIVILVNLG*VPPFAK
Trigger: TTTGGCAAATGGTGGGACCAACCCAAGGTTAACTAA...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTATCAGCTTGGTATAGCTaGGTAGTTTGGATATGCTTT +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLSAWYS*VVWICF
Trigger: AAAGCATATCCAAACTACCAAGCTATACCAAGCTGA...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTATTTACCCACCTTCACTaGACTTCTTCAGTGGATTTT +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLFTHLH*TSSVDF
Trigger: AAAATCCACTGAAGAAGTCAAGTGAAGGTGGGTAAA...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTAGATGTATGCCTGTTTCATTTGCATCCAATACTTTCATGGGAAGCCTCTCTACTTGGAAGAATCGATTaGGAACAGTTCAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: LDVCLFHLHPILSWEASLLGRID*EQFRFI
Trigger: AATAAACCTGAACTGTTCCAAATCGATTCTTCCAAG...TAGAGAGGCTTCCCATGAAAGTATTGGATGCAAATGAAACAGGCATACATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAAAACTCTCTGACATTTaGTCGCAGATGATATCCACA +
Preference number: 5 (lower is better)
Translates to: LFIITMPQLSATTEGIVIKLSDI*SQMIST
Trigger: TGTGGATATCATCTGCGACAAAATGTCAGAGAGTTT...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp AATTACATGCACAGACTAATCAAACGAAATCAGTGTGAAGAACCGATTTTATGGAATGCGTACGAGCCATaGACATCAATTTATTCCTTC +
Preference number: 5 (lower is better)
Translates to: NYMHRLIKRNQCEEPILWNAYEP*TSIYSF
Trigger: GAAGGAATAAATTGATGTCAATGGCTCGTACGCATT...CCATAAAATCGGTTCTTCACACTGATTTCGTTTGATTAGTCTGTGCATGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAAGTAATTCCTGTGATTTaGAAGTTGGTTGCCCCATTA +
Preference number: 5 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEVIPVI*KLVAPL
Trigger: TAATGGGGCAACCAACTTCAAAATCACAGGAATTAC...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp TTGTTTATTATCACAATGCCACAACTTTCTGCTACAACTGAAGGCATTGTCATAAGTATCAGATGTTTCTaGGCAATGACATTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: LFIITMPQLSATTEGIVISIRCF*AMTFGL
Trigger: TAGCCCAAATGTCATTGCCAAGAAACATCTGATACT...TATGACAATGCCTTCAGTTGTAGCAGAAAGTTGTGGCATTGTGATAATAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS-3UTR CAA 90 bp AATGATTCTGATTTGTTCCTCTTATATCACCAGTGTGGACAACTGAGAATTGAATGGTTAAAATGCTTGTaGCATAACTGGCATTCAGTA +
Preference number: 5 (lower is better)
Translates to: NDSDLFLLYHQCGQLRIEWLKCL*HNWHSV
Trigger: TACTGAATGCCAGTTATGCAACAAGCATTTTAACCA...TTCAATTCTCAGTTGTCCACACTGGTGATATAAGAGGAACAAATCAGAATCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS GCA 72 bp GCTAGGACCGCACTGGTCTGGGCTTCCGGTCAAGCGTaGACAGTCCCGGCGCTCCACGCTCCACACTCTGCA +
Preference number: 6 (lower is better)
Translates to: ARTALVWASGQA*TVPALHAPHSA
Trigger: TGCAGAGTGTGGAGCGTGGAGCGCCGGGACTGTGCACGCTTGACCGGAAGCCCAGACCAGTGCGGTCCTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS CCA 72 bp AAATGTCCTTTCTCTCTGGCTAGGACCGCACTGGTCTaGGCTTCCGGTCAAGCGTGCACAGTCCCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: KCPFSLARTALV*ASGQACTVPAL
Trigger: GAGCGCCGGGACTGTGCACGCTTGACCGGAAGCCCAGACCAGTGCGGTCCTAGCCAGAGAGAAAGGACATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS CCA 72 bp TTGGCAAATGTCCTTTCTCTCTGGCTAGGACCGCACTaGTCTGGGCTTCCGGTCAAGCGTGCACAGTCCCGG +
Preference number: 6 (lower is better)
Translates to: LANVLSLWLGPH*SGLPVKRAQSR
Trigger: CCGGGACTGTGCACGCTTGACCGGAAGCCCAGACCAGTGCGGTCCTAGCCAGAGAGAAAGGACATTTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS CCA 72 bp TGCACGGGGACACTAGCAGGCACAGTTGGGCTGCGGTaGAGGAGGAGTTTCCTTGAGTCTCGTGTTCTGCTT +
Preference number: 6 (lower is better)
Translates to: CTGTLAGTVGLR*RRSFLESRVLL
Trigger: AAGCAGAACACGAGACTCAAGGAAACTCCTCCTCCACCGCAGCCCAACTGTGCCTGCTAGTGTCCCCGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282878.6
ENST00000381158.3
CDS CAA 90 bp CATCTTGGGCAGAGGCCATCTGCATGGGCGCTTCGTGTCTCATTGTaGGCAAATGTCCTTTCTCTCTGGCTAGGACCGCACTGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: HLGQRPSAWALRVSL*ANVLSLWLGPHWSG
Trigger: CCCAGACCAGTGCGGTCCTAGCCAGAGAGAAAGGACATTTGCCAACAATGAGACACGAAGCGCCCATGCAGATGGCCTCTGCCCAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS CAA 72 bp GGGCAGAGGCCATCTGCATGGGCGCTTCGTGTCTCATaGTTGGCAAATGTCCTTTCTCTCTGGCTAGGACCG +
Preference number: 6 (lower is better)
Translates to: GQRPSAWALRVS*LANVLSLWLGP
Trigger: CGGTCCTAGCCAGAGAGAAAGGACATTTGCCAACAATGAGACACGAAGCGCCCATGCAGATGGCCTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS CAA 72 bp CAGAGGCCATCTGCATGGGCGCTTCGTGTCTCATTGTaGGCAAATGTCCTTTCTCTCTGGCTAGGACCGCAC +
Preference number: 6 (lower is better)
Translates to: QRPSAWALRVSL*ANVLSLWLGPH
Trigger: GTGCGGTCCTAGCCAGAGAGAAAGGACATTTGCCAACAATGAGACACGAAGCGCCCATGCAGATGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282878.6
CDS GCA 72 bp TGCGGTGGAGGAGGAGTTTCCTTGAGTCTCGTGTTCTaGTTTGCAGCAGTGATGGCAGGATCAGTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: CGGGGVSLSLVF*FAAVMAGSVSK
Trigger: TTTGGAGACTGATCCTGCCATCACTGCTGCAAAGCAGAACACGAGACTCAAGGAAACTCCTCCTCCACCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282878.6
ENST00000381158.3
CDS GCA 72 bp TGGAGGAGGAGTTTCCTTGAGTCTCGTGTTCTGCTTTaGAGCAGTGATGGCAGGATCAGTCTCCAAACTCTC +
Preference number: 6 (lower is better)
Translates to: WRRSFLESRVLL*SSDGRISLQTL
Trigger: GAGAGTTTGGAGACTGATCCTGCCATCACTGCTGCAAAGCAGAACACGAGACTCAAGGAAACTCCTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282878.6
ENST00000381158.3
CDS GCA 72 bp CCTGAAGGCACGGACTGTCAGCCAAAGTATAGATCATaGAGGCACGGGGCTAGGCATCTTACACAAATTATG +
Preference number: 6 (lower is better)
Translates to: PEGTDCQPKYRS*RHGARHLTQIM
Trigger: CATAATTTGTGTAAGATGCCTAGCCCCGTGCCTGCATGATCTATACTTTGGCTGACAGTCCGTGCCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507977.1
CDS CAA 72 bp GTGAAATATTGTGTTGGCACCAGGGAGCAGGATAAGTaGTCCATACCAAATCCTGGATGCAACGCAATACTG +
Preference number: 6 (lower is better)
Translates to: VKYCVGTREQDK*SIPNPGCNAIL
Trigger: CAGTATTGCGTTGCATCCAGGATTTGGTATGGACAACTTATCCTGCTCCCTGGTGCCAACACAATATTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507977.1
CDS GCA 72 bp AGGGAGCAGGATAAGTTGTCCATACCAAATCCTGGATaGAACGCAATACTGTCTGTTCTCAGATATTCTTGT +
Preference number: 6 (lower is better)
Translates to: REQDKLSIPNPG*NAILSVLRYSC
Trigger: ACAAGAATATCTGAGAACAGACAGTATTGCGTTGCATCCAGGATTTGGTATGGACAACTTATCCTGCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507977.1