RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB3B (Homo sapiens)

Ensembl gene IDs: ENSG00000169213

Ensembl transcript IDs: ENST00000371655.4

Found 640 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGGCATCCGTGGTAACAGGCGCAGGGCTTTGAGAGCCCAAGCTTaGCTTGTAGTGAGAGAAAGCCCCGCAGGGAGCCCGATAGGAAAC +
Preference number: 1 (lower is better)
Translates to: VGIRGNRRRALRAQA*LVVRESPAGSPIGN
Trigger: GTTTCCTATCGGGCTCCCTGCGGGGCTTTCTCTCACTACAAGTCAAGCTTGGGCTCTCAAAGCCCTGCGCCTGTTACCACGGATGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp AGTCTGAGCTCTCTGAAGATTAGCTCTTCCTGTCGCCACAGCAACTaGCCAGGCCCTGTGGGCATCCGTGGTAACAGGCGCAGGGCTTTG +
Preference number: 1 (lower is better)
Translates to: SLSSLKISSSCRHSN*PGPVGIRGNRRRAL
Trigger: CAAAGCCCTGCGCCTGTTACCACGGATGCCCACAGGGCCTGGGCAGTTGCTGTGGCGACAGGAAGAGCTAATCTTCAGAGAGCTCAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp GGAGCATGGAGGCTCCTGCTGATTGGGAGCCTGATAAGTGTTGCCTaGCAGAGGCAGATACAGGGAAAGCCAGCACTTGGGACTGGGAAG +
Preference number: 1 (lower is better)
Translates to: GAWRLLLIGSLISVA*QRQIQGKPALGTGK
Trigger: CTTCCCAGTCCCAAGTGCTGGCTTTCCCTGTATCTGCCTCTGCCAGGCAACACTTATCAGGCTCCCAATCAGCAGGAGCCTCCATGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp CAGAGGCAGATACAGGGAAAGCCAGCACTTGGGACTGGGAAGCACTaGGCATTTTCTACCCAGGCCCATGGGATCTGTTGCCTCAGAGAC +
Preference number: 1 (lower is better)
Translates to: QRQIQGKPALGTGKH*AFSTQAHGICCLRD
Trigger: GTCTCTGAGGCAACAGATCCCATGGGCCTGGGTAGAAAATGCCCAGTGCTTCCCAGTCCCAAGTGCTGGCTTTCCCTGTATCTGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp GCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGAGCTaGTCATGGCATTTTCCTGGACTCTCCTCCCTTGGTCCTGACTGG +
Preference number: 1 (lower is better)
Translates to: ADPTLTQPNKVMLQS*SWHFPGLSSLGPDW
Trigger: CCAGTCAGGACCAAGGGAGGAGAGTCCAGGAAAATGCCATGAGCAGCTCTGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp CAAATGCCCCATTGCTGGAGCATAGAGGCTGTTCAAAGTGGAGCATaGAGGCTCCTGCTGATTGGGAGCCTGATAAGTGTTGCCTGGCAG +
Preference number: 1 (lower is better)
Translates to: QMPHCWSIEAVQSGA*RLLLIGSLISVAWQ
Trigger: CTGCCAGGCAACACTTATCAGGCTCCCAATCAGCAGGAGCCTCCATGCTCCACTTTGAACAGCCTCTATGCTCCAGCAATGGGGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp GAGCATAGAGGCTGTTCAAAGTGGAGCATGGAGGCTCCTGCTGATTaGGAGCCTGATAAGTGTTGCCTGGCAGAGGCAGATACAGGGAAA +
Preference number: 1 (lower is better)
Translates to: EHRGCSKWSMEAPAD*EPDKCCLAEADTGK
Trigger: TTTCCCTGTATCTGCCTCTGCCAGGCAACACTTATCAGGCTCCCAATCAGCAGGAGCCTCCATGCTCCACTTTGAACAGCCTCTATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp GAAAGCCCCGCAGGGAGCCCGATAGGAAACAAGCACGTTGTGCTTTaGGAAGTTGTCTTTAACAGGATTAGCTATGCAGGCGAGCCTCAC +
Preference number: 1 (lower is better)
Translates to: ESPAGSPIGNKHVVL*EVVFNRISYAGEPH
Trigger: GTGAGGCTCGCCTGCATAGCTAATCCTGTTAAAGACAACTTCTCAAAGCACAACGTGCTTGTTTCCTATCGGGCTCCCTGCGGGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp CGATATCCAAGCAAGGAGCTTAGTGGCCGGCAGGAGCAGGTGATATaGGTTGGGGAGTCAGGTCTGGAGAATGGTCTTATTCTGTGGATG +
Preference number: 1 (lower is better)
Translates to: RYPSKELSGRQEQVI*VGESGLENGLILWM
Trigger: CATCCACAGAATAAGACCATTCTCCAGACCTGACTCCCCAACTCATATCACCTGCTCCTGCCGGCCACTAAGCTCCTTGCTTGGATATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp CTGTGTGGCCACAGAGATAGATCATCTGCTCCTGGCTCCTTGATCTaGGGGAAGCCTCTGCTGTTCAACCTGCTCCAGGGTTTAATTCTG +
Preference number: 1 (lower is better)
Translates to: LCGHRDRSSAPGSLI*GKPLLFNLLQGLIL
Trigger: CAGAATTAAACCCTGGAGCAGGTTGAACAGCAGAGGCTTCCCTCAGATCAAGGAGCCAGGAGCAGATGATCTATCTCTGTGGCCACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp CTCTTCACAAATGCCCCATTGCTGGAGCATAGAGGCTGTTCAAAGTaGAGCATGGAGGCTCCTGCTGATTGGGAGCCTGATAAGTGTTGC +
Preference number: 1 (lower is better)
Translates to: LFTNAPLLEHRGCSK*SMEAPADWEPDKCC
Trigger: GCAACACTTATCAGGCTCCCAATCAGCAGGAGCCTCCATGCTCCACTTTGAACAGCCTCTATGCTCCAGCAATGGGGCATTTGTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp GTGGAGAAAGGAGTGGCAGTGGAGTTAGCTGTTTTGTCTACCTGCTaGATACCTGGGAAGCCAGACTCTGTGTGGACAGTGATCCCTAGT +
Preference number: 1 (lower is better)
Translates to: VEKGVAVELAVLSTC*IPGKPDSVWTVIPS
Trigger: ACTAGGGATCACTGTCCACACAGAGTCTGGCTTCCCAGGTATCCAGCAGGTAGACAAAACAGCTAACTCCACTGCCACTCCTTTCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp ATTTCTGGGGGAAGGAGGAAGTGCATGAGGTACCTTTCTGTCACATaGCTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATG +
Preference number: 1 (lower is better)
Translates to: ISGGRRKCMRYLSVT*LVADPTLTQPNKVM
Trigger: CATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTGACAGAAAGGTACCTCATGCACTTCCTCCTTCCCCCAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp CCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGAGCTGCTCATaGCATTTTCCTGGACTCTCCTCCCTTGGTCCTGACTGGATTCTT +
Preference number: 1 (lower is better)
Translates to: PTLTQPNKVMLQSCS*HFPGLSSLGPDWIL
Trigger: AAGAATCCAGTCAGGACCAAGGGAGGAGAGTCCAGGAAAATGCCATGAGCAGCTCTGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp AAACTCGATATCCAAGCAAGGAGCTTAGTGGCCGGCAGGAGCAGGTaGTATGAGTTGGGGAGTCAGGTCTGGAGAATGGTCTTATTCTGT +
Preference number: 1 (lower is better)
Translates to: KLDIQARSLVAGRSR*YELGSQVWRMVLFC
Trigger: ACAGAATAAGACCATTCTCCAGACCTGACTCCCCAACTCATATCACCTGCTCCTGCCGGCCACTAAGCTCCTTGCTTGGATATCGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp AATCCTTTAGTTTCCAGGCTTTTAGCTGCATGGCAGAGTTTGTCCTaGGAAAGATCTTGCCCAGCTCAGCCTGGCACACACGGGTCCATA +
Preference number: 1 (lower is better)
Translates to: NPLVSRLLAAWQSLS*ERSCPAQPGTHGSI
Trigger: TATGGACCCGTGTGTGCCAGGCTGAGCTGGGCAAGATCTTTCTCAGGACAAACTCTGCCATGCAGCTAAAAGCCTGGAAACTAAAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp ACAGAGCTGCTCATGGCATTTTCCTGGACTCTCCTCCCTTGGTCCTaGCTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAAGCTCC +
Preference number: 1 (lower is better)
Translates to: TELLMAFSWTLLPWS*LDSSTLIHLVSSSS
Trigger: GGAGCTTGAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGAGTCCAGGAAAATGCCATGAGCAGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp GGAGGGAAGGAGCTGAAAGAAGGAGGGGATCCTTGGAAAGGGCTCTaGGAGGGGTGTATTCGTTTCATTCTGAGACGAATACCATCTATC +
Preference number: 1 (lower is better)
Translates to: GGKELKEGGDPWKGL*EGCIRFILRRIPSI
Trigger: GATAGATGGTATTCGTCTCAGAATGAAACGAATACACCCCTCTCAGAGCCCTTTCCAAGGATCCCCTCCTTCTTTCAGCTCCTTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp CCGGCAGGAGCAGGTGATATGAGTTGGGGAGTCAGGTCTGGAGAATaGTCTTATTCTGTGGATGTTATAAGGCTTCGGTCACCAAGCAAT +
Preference number: 1 (lower is better)
Translates to: PAGAGDMSWGVRSGE*SYSVDVIRLRSPSN
Trigger: ATTGCTTGGTGACCGAAGCCTTATAACATCCACAGAATAAGACCATTCTCCAGACCTGACTCCCCAACTCATATCACCTGCTCCTGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp ACTGCTCTGTTCATCCAGGCCCAGCATGTAGTGGCTGATTCTTCTTaGCTGCTTTTAGCCTCCAGAAGTTTCTCTGAAGCCAACCAAACC +
Preference number: 1 (lower is better)
Translates to: TALFIQAQHVVADSS*LLLASRSFSEANQT
Trigger: GGTTTGGTTGGCTTCAGAGAAACTTCTGGAGGCTAAAAGCAGCCAAGAAGAATCAGCCACTACATGCTGGGCCTGGATGAACAGAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp GATGCAGCCCAGAATGTGGTTAAGAGCACAGACCTTGGAGCCTACTaGCTGGATGTGAACTCCAGCTCTACCACTTACTTATTATGTGAC +
Preference number: 1 (lower is better)
Translates to: DAAQNVVKSTDLGAY*LDVNSSSTTYLLCD
Trigger: GTCACATAATAAGTAAGTGGTAGAGCTGGAGTTCACATCCAGGCAGTAGGCTCCAAGGTCTGTGCTCTTAACCACATTCTGGGCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp AAGCCAGACTCTGTGTGGACAGTGATCCCTAGTCATAGGAAACTTTaGCTGTGCTGTCATCAGTGTCCATGGAGAACTGCTTCTCACCTT +
Preference number: 1 (lower is better)
Translates to: KPDSVWTVIPSHRKL*LCCHQCPWRTASHL
Trigger: AAGGTGAGAAGCAGTTCTCCATGGACACTGATGACAGCACAGGCAAAGTTTCCTATGACTAGGGATCACTGTCCACACAGAGTCTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp CCTAGAATAGTCAGGCATGGACCATCCAAACACAAATTGCTAAGATaGTTTCTGGCAGCCTCAGAAACCAGGACCATACGCCTGGCTAAG +
Preference number: 1 (lower is better)
Translates to: PRIVRHGPSKHKLLR*FLAASETRTIRLAK
Trigger: CTTAGCCAGGCGTATGGTCCTGGTTTCTGAGGCTGCCAGAAAGCATCTTAGCAATTTGTGTTTGGATGGTCCATGCCTGACTATTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp CAAGCTCCATCTCCTACTTACACAATGCCCCTTCTCTTGCTCCTTTaGTCATGGTGTTTACACTGGCTTTCTCCAGTCTCTGGTTCTCAG +
Preference number: 1 (lower is better)
Translates to: QAPSPTYTMPLLLLL*SWCLHWLSPVSGSQ
Trigger: CTGAGAACCAGAGACTGGAGAAAGCCAGTGTAAACACCATGAGCAAAGGAGCAAGAGAAGGGGCATTGTGTAAGTAGGAGATGGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp TTGCCTGTGCTGTCATCAGTGTCCATGGAGAACTGCTTCTCACCTTaGGAAATCCCTCTTCTTCGTTCCTTCAGGTACAAGAAGAGAGGA +
Preference number: 1 (lower is better)
Translates to: LPVLSSVSMENCFSP*EIPLLRSFRYKKRG
Trigger: TCCTCTCTTCTTGTACCTGAAGGAACGAAGAAGAGGGATTTCTCAAGGTGAGAAGCAGTTCTCCATGGACACTGATGACAGCACAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp GGTCTGTCAGACTGTAAGCCCTGTAGGCTTAACTATTCTGCCTTATaGCCTTCTGAAACCTCATCCTGTGGTCTGATGTCTACAGGGGTT +
Preference number: 1 (lower is better)
Translates to: GLSDCKPCRLNYSAL*PSETSSCGLMSTGV
Trigger: AACCCCTGTAGACATCAGACCACAGGATGAGGTTTCAGAAGGTCATAAGGCAGAATAGTTAAGCCTACAGGGCTTACAGTCTGACAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp GGGTCTAGAAAACCAGAGACCACACTCTTTCTCACCTTATGTCTCTaGTGCCCTCTGCCTAATGGCCTTGTTTTCGCTTACTATAGACCA +
Preference number: 1 (lower is better)
Translates to: GSRKPETTLFLTLCL*CPLPNGLVFAYYRP
Trigger: TGGTCTATAGTAAGCGAAAACAAGGCCATTAGGCAGAGGGCAGCAGAGACATAAGGTGAGAAAGAGTGTGGTCTCTGGTTTTCTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp TTGCATTTACTTCCAGCCACAGGATGCTACTTGATTCCCCAACTATaGCAGGTAATTGGGTGTAGGCTTGGGGCAGGGAATCTGAAATCA +
Preference number: 1 (lower is better)
Translates to: LHLLPATGCYLIPQL*QVIGCRLGAGNLKS
Trigger: TGATTTCAGATTCCCTGCCCCAAGCCTACACCCAATTACCTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGGCTGGAAGTAAATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp ATTAGCTATGCAGGCGAGCCTCACTTTACGCAATTGGCATGCCCCTaGAGAATGTGTGCGTGTCAAATTTTGGTAAATGGAGGAACTCTC +
Preference number: 1 (lower is better)
Translates to: ISYAGEPHFTQLACP*RMCACQILVNGGTL
Trigger: GAGAGTTCCTCCATTTACCAAAATTTGACACGCACACATTCTTCAGGGGCATGCCAATTGCGTAAAGTGAGGCTCGCCTGCATAGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp AGTGCCAACATCACACGTTCGGCATCTACTGTGTGTGCACGGCACTaGACTAAGGGTTTTACACCCATTCTCCATTTAATCCTTTCAACA +
Preference number: 1 (lower is better)
Translates to: SANITRSASTVCARH*TKGFTPILHLILST
Trigger: TGTTGAAAGGATTAAATGGAGAATGGGTGTAAAACCCTTAGTGCAGTGCCGTGCACACACAGTAGATGCCGAACGTGTGATGTTGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp AGTAAGTTCAAGCTCCATCTCCTACTTACACAATGCCCCTTCTCTTaGTCCTTTGCTCATGGTGTTTACACTGGCTTTCTCCAGTCTCTG +
Preference number: 1 (lower is better)
Translates to: SKFKLHLLLTQCPFS*SFAHGVYTGFLQSL
Trigger: CAGAGACTGGAGAAAGCCAGTGTAAACACCATGAGCAAAGGAGCAAGAGAAGGGGCATTGTGTAAGTAGGAGATGGAGCTTGAACTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp CTAGTACAGAGTAAGCATGACATCAGAGTTGGCCGAGACAACTCTTaGATGCCAATCCTGATCTCTCAGGTTTGTTTGGTGGATCAACTG +
Preference number: 1 (lower is better)
Translates to: LVQSKHDIRVGRDNS*MPILISQVCLVDQL
Trigger: CAGTTGATCCACCAAACAAACCTGAGAGATCAGGATTGGCATCCAAGAGTTGTCTCGGCCAACTCTGATGTCATGCTTACTCTGTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp AGAATGTGGTTAAGAGCACAGACCTTGGAGCCTACTGCCTGGATGTaGACTCCAGCTCTACCACTTACTTATTATGTGACTTTAGAGGTC +
Preference number: 1 (lower is better)
Translates to: RMWLRAQTLEPTAWM*TPALPLTYYVTLEV
Trigger: GACCTCTAAAGTCACATAATAAGTAAGTGGTAGAGCTGGAGTTCACATCCAGGCAGTAGGCTCCAAGGTCTGTGCTCTTAACCACATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp CTGGAACAGATCTTCTCTAAGCTCCTTTCCAGATCTGATAATCGATaGGTCTGTGACCATTCAGTACACTCTACTCCACTGCTGCTCCTA +
Preference number: 1 (lower is better)
Translates to: LEQIFSKLLSRSDNR*VCDHSVHSTPLLLL
Trigger: TAGGAGCAGCAGTGGAGTAGAGTGTACTGAATGGTCACAGACTCATCGATTATCAGATCTGGAAAGGAGCTTAGAGAAGATCTGTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp GAGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATaGGACCAGCCTGGTCCCCAGTTGAATAAATTAGAAAGAGCAGTT +
Preference number: 1 (lower is better)
Translates to: EEFCSYCYGTSPRLA*DQPGPQLNKLERAV
Trigger: AACTGCTCTTTCTAATTTATTCAACTGGGGACCAGGCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp ATCAGTGAGACATTGGCAAATGTGATGGAAACAGAGCTTGAAAAGTaGTTCTGTGTTGGATCTTGCCCTCTCTTGCTTCGAGGAAACTCC +
Preference number: 1 (lower is better)
Translates to: ISETLANVMETELEK*FCVGSCPLLLRGNS
Trigger: GGAGTTTCCTCGAAGCAAGAGAGGGCAAGATCCAACACAGAAGCACTTTTCAAGCTCTGTTTCCATCACATTTGCCAATGTCTCACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp AACCAGAGACCACACTCTTTCTCACCTTATGTCTCTGCTGCCCTCTaGCTAATGGCCTTGTTTTCGCTTACTATAGACCAGAATTTACAC +
Preference number: 1 (lower is better)
Translates to: NQRPHSFSPYVSAAL*LMALFSLTIDQNLH
Trigger: GTGTAAATTCTGGTCTATAGTAAGCGAAAACAAGGCCATTAGGCAGAGGGCAGCAGAGACATAAGGTGAGAAAGAGTGTGGTCTCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp TTACAAAGATCCTGGATTAGATTTGCCTGCCTAGCTCTGCCTGATTaGGATTACACATTGTGTAGTGCCAACATCACACGTTCGGCATCT +
Preference number: 1 (lower is better)
Translates to: LQRSWIRFACLALPD*DYTLCSANITRSAS
Trigger: AGATGCCGAACGTGTGATGTTGGCACTACACAATGTGTAATCCCAATCAGGCAGAGCTAGGCAGGCAAATCTAATCCAGGATCTTTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp CATATTACACAGCTTGAACCTTGGTGGCTAATTGCGCTATTACTGTaGTTGATGAACACTATGCTGCAATCAGCTGGAAGCTGCTGCCTT +
Preference number: 1 (lower is better)
Translates to: HITQLEPWWLIALLL*LMNTMLQSAGSCCL
Trigger: AAGGCAGCAGCTTCCAGCTGATTGCAGCATAGTGTTCATCAATCACAGTAATAGCGCAATTAGCCACCAAGGTTCAAGCTGTGTAATATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp ACTTGGCCATGGAACTTGTGTTCATCAGTGAGACATTGGCAAATGTaGTGGAAACAGAGCTTGAAAAGTGCTTCTGTGTTGGATCTTGCC +
Preference number: 1 (lower is better)
Translates to: TWPWNLCSSVRHWQM*WKQSLKSASVLDLA
Trigger: GGCAAGATCCAACACAGAAGCACTTTTCAAGCTCTGTTTCCATCACATTTGCCAATGTCTCACTGATGAACACAAGTTCCATGGCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp TATATCTCACGGACTAGTGTTTTGCATTTACTTCCAGCCACAGGATaGTACTTGATTCCCCAACTATGGCAGGTAATTGGGTGTAGGCTT +
Preference number: 1 (lower is better)
Translates to: YISRTSVLHLLPATG*YLIPQLWQVIGCRL
Trigger: AAGCCTACACCCAATTACCTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGGCTGGAAGTAAATGCAAAACACTAGTCCGTGAGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp AATGTGATGGAAACAGAGCTTGAAAAGTGCTTCTGTGTTGGATCTTaGCCTCTCTTGCTTCGAGGAAACTCCTGCTACCATATGGACAAA +
Preference number: 1 (lower is better)
Translates to: NVMETELEKCFCVGS*PLLLRGNSCYHMDK
Trigger: TTTGTCCATATGGTAGCAGGAGTTTCCTCGAAGCAAGAGAGGGCAAGATCCAACACAGAAGCACTTTTCAAGCTCTGTTTCCATCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp TCACACCCAGAACCACTGCCCTCTGAAGCAACTGTATTATACCCATaGTCAGAAAAGTTAATCAAGTCACTCTTCACAAATGCCCCATTG +
Preference number: 1 (lower is better)
Translates to: SHPEPLPSEATVLYP*SEKLIKSLFTNAPL
Trigger: CAATGGGGCATTTGTGAAGAGTGACTTGATTAACTTTTCTGACCATGGGTATAATACAGTTGCTTCAGAGGGCAGTGGTTCTGGGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp AAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATaGGAAAGTGCTTTGGGAACTGTAAAGTGCCTAACACATGATCGA +
Preference number: 1 (lower is better)
Translates to: KTHITVLCQRSSGHG*ESALGTVKCLTHDR
Trigger: TCGATCATGTGTTAGGCACTTTACAGTTCCCAAAGCACTTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp GGAGAAGACCCTATGAAGAACAGCAGATGGAATTATAGAGGTATTTaGCCTAGAGAAAAGGCAAGTCCCAGGAGTCATGATTCCTGTTCT +
Preference number: 1 (lower is better)
Translates to: GEDPMKNSRWNYRGI*PREKASPRSHDSCS
Trigger: AGAACAGGAATCATGACTCCTGGGACTTGCCTTTTCTCTAGGTCAAATACCTCTATAATTCCATCTGCTGTTCTTCATAGGGTCTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp CCAACTGTTCTTGGAGCCATCTTTTCTATATATACTGAATCTTTCTaGTGGGCTTCTGGCCAGGAACTTCCGGTAGGAATTACAACCATT +
Preference number: 1 (lower is better)
Translates to: PTVLGAIFSIYTESF*WASGQELPVGITTI
Trigger: AATGGTTGTAATTCCTACCGGAAGTTCCTGGCCAGAAGCCCAGCAGAAAGATTCAGTATATATAGAAAAGATGGCTCCAAGAACAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp AAGATAGTTTACTACATGAAATCCTTTAGTTTCCAGGCTTTTAGCTaGATGGCAGAGTTTGTCCTGAGAAAGATCTTGCCCAGCTCAGCC +
Preference number: 1 (lower is better)
Translates to: KIVYYMKSFSFQAFS*MAEFVLRKILPSSA
Trigger: GGCTGAGCTGGGCAAGATCTTTCTCAGGACAAACTCTGCCATGCAGCTAAAAGCCTGGAAACTAAAGGATTTCATGTAGTAAACTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp GAGGCTCACTATAGTGCCTCCCTCACAAGATGTTGGGAAGATAAATaGGTTAATGCACGTAAAATGCTTGGAACAATGTCTAGTACAGAG +
Preference number: 1 (lower is better)
Translates to: EAHYSASLTRCWEDK*VNARKMLGTMSSTE
Trigger: CTCTGTACTAGACATTGTTCCAAGCATTTTACGTGCATTAACTCATTTATCTTCCCAACATCTTGTGAGGGAGGCACTATAGTGAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp GTAGATAGTATTACTTCATTTACATATGAAGTAACTGAGGCTCACTaGGGCTCCGGGAGTCATCTTCCCGAAGTCACAAAACTAGTGATG +
Preference number: 1 (lower is better)
Translates to: VDSITSFTYEVTEAH*GSGSHLPEVTKLVM
Trigger: CATCACTAGTTTTGTGACTTCGGGAAGATGACTCCCGGAGCCTCAGTGAGCCTCAGTTACTTCATATGTAAATGAAGTAATACTATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp ACTGTTCTTGGAGCCATCTTTTCTATATATACTGAATCTTTCTGCTaGGCTTCTGGCCAGGAACTTCCGGTAGGAATTACAACCATTATC +
Preference number: 1 (lower is better)
Translates to: TVLGAIFSIYTESFC*ASGQELPVGITTII
Trigger: GATAATGGTTGTAATTCCTACCGGAAGTTCCTGGCCAGAAGCCCAGCAGAAAGATTCAGTATATATAGAAAAGATGGCTCCAAGAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp AAAAGATGGATTGGAGGAAAAGGGCAGGATAGGGAGAAGACCCTATaGAGAACAGCAGATGGAATTATAGAGGTATTTGACCTAGAGAAA +
Preference number: 1 (lower is better)
Translates to: KRWIGGKGQDREKTL*RTADGIIEVFDLEK
Trigger: TTTCTCTAGGTCAAATACCTCTATAATTCCATCTGCTGTTCTTCATAGGGTCTTCTCCCTATCCTGCCCTTTTCCTCCAATCCATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp AGATTAAATCCAGGACAAGTTGCCACTAACACATATTACACAGCTTaGACCTTGGTGGCTAATTGCGCTATTACTGTGATTGATGAACAC +
Preference number: 1 (lower is better)
Translates to: RLNPGQVATNTYYTA*TLVANCAITVIDEH
Trigger: GTGTTCATCAATCACAGTAATAGCGCAATTAGCCACCAAGGTTCAAGCTGTGTAATATGTGTTAGTGGCAACTTGTCCTGGATTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp CACTCTACTCCACTGCTGCTCCTAGAAGTTAATAATGCTATAGACTaGGGAGACAATGAGTCACGAATCACTTTGTATTTACAGATACAC +
Preference number: 1 (lower is better)
Translates to: HSTPLLLLEVNNAID*GDNESRITLYLQIH
Trigger: GTGTATCTGTAAATACAAAGTGATTCGTGACTCATTGTCTCCTCAGTCTATAGCATTATTAACTTCTAGGAGCAGCAGTGGAGTAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp CTAGTGGGTGACTTGAGCATGTTAACTTTTCCAGGGCTGTTTCCTTaGCTGCCAAATTGGGATAATAATATTTTAGAAACAGCATCTCCA +
Preference number: 1 (lower is better)
Translates to: LVGDLSMLTFPGLFP*LPNWDNNILETASP
Trigger: TGGAGATGCTGTTTCTAAAATATTATTATCCCAATTTGGCAGTCAAGGAAACAGCCCTGGAAAAGTTAACATGCTCAAGTCACCCACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp GTTATAAGGCTTCGGTCACCAAGCAATTGTGGCTATTTAATTAACTaGGGTTATTTAACTCTAAGAATCCTTGGGAGCCTGGTACTACCA +
Preference number: 1 (lower is better)
Translates to: VIRLRSPSNCGYLIN*GYLTLRILGSLVLP
Trigger: TGGTAGTACCAGGCTCCCAAGGATTCTTAGAGTTAAATAACCTCAGTTAATTAAATAGCCACAATTGCTTGGTGACCGAAGCCTTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp TTAACTATTCTGCCTTATGACCTTCTGAAACCTCATCCTGTGGTCTaGTGTCTACAGGGGTTGGAAGATAGTTTACTACATGAAATCCTT +
Preference number: 1 (lower is better)
Translates to: LTILPYDLLKPHPVV*CLQGLEDSLLHEIL
Trigger: AAGGATTTCATGTAGTAAACTATCTTCCAACCCCTGTAGACATCAGACCACAGGATGAGGTTTCAGAAGGTCATAAGGCAGAATAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 90 bp ATCACTATTAAACAAATGATAAGACTGCCCTGCCCTATACAGTTTTaGCACTTGTCTTTGGTGATATCATCGGAGCCATGTTTTAAGACC +
Preference number: 1 (lower is better)
Translates to: ITIKQMIRLPCPIQF*HLSLVISSEPCFKT
Trigger: GGTCTTAAAACATGGCTCCGATGATATCACCAAAGACAAGTGGCAAAACTGTATAGGGCAGGGCAGTCTTATCATTTGTTTAATAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp TTCCATTCTTTGGATGTCAACCTTCCCTTCTATAAAATAGGAGCCTaGAACAGATCTTCTCTAAGCTCCTTTCCAGATCTGATAATCGAT +
Preference number: 1 (lower is better)
Translates to: FHSLDVNLPFYKIGA*NRSSLSSFPDLIID
Trigger: ATCGATTATCAGATCTGGAAAGGAGCTTAGAGAAGATCTGTTCCAGGCTCCTATTTTATAGAAGGGAAGGTTGACATCCAAAGAATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp CTTGATCACATGCTCCGTTTATTGACAGTCTTCACTAGAATCACCTaGTTTGGGTTAGGGAGTAGTAGTACTACTAAAGAAGAGATTACT +
Preference number: 1 (lower is better)
Translates to: LDHMLRLLTVFTRIT*FGLGSSSTTKEEIT
Trigger: AGTAATCTCTTCTTTAGTAGTACTACTACTCCCTAACCCAAACCAGGTGATTCTAGTGAAGACTGTCAATAAACGGAGCATGTGATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 90 bp ATACAATGTTACAGTGTAAAAATCACACCCAGAACCACTGCCCTCTaGAGCAACTGTATTATACCCATGGTCAGAAAAGTTAATCAAGTC +
Preference number: 1 (lower is better)
Translates to: IQCYSVKITPRTTAL*SNCIIPMVRKVNQV
Trigger: GACTTGATTAACTTTTCTGACCATGGGTATAATACAGTTGCTTCAGAGGGCAGTGGTTCTGGGTGTGATTTTTACACTGTAACATTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 90 bp AATGGCCTTGTTTTCGCTTACTATAGACCAGAATTTACACAGGGATaGAGAATAAGCCATCACAGCTTTAGACCTCATATCTTCAAATAT +
Preference number: 1 (lower is better)
Translates to: NGLVFAYYRPEFTQG*RISHHSFRPHIFKY
Trigger: ATATTTGAAGATATGAGGTCTAAAGCTGTGATGGCTTATTCTCCATCCCTGTGTAAATTCTGGTCTATAGTAAGCGAAAACAAGGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATCGCCCAGGCCGGACTaGGGACTGCAGTGGCGCAAT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATSPRPD*GLQWRN
Trigger: ATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGGTGTGGGGCCACAATaGGGGGAGGTCAGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSGVGPQ*GEVRKV
Trigger: CACCTTCCTGACCTCCCCTCATTGTGGCCCCACACC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAACAGGGAGAGTGGGCTaGGAGCGGACAGTGTGTAAC +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATTGRVG*ERTVCN
Trigger: GTTACACACTGTCCGCTCTCAGCCCACTCTCCCTGT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACAGCCTTCTGGAGGATaGCACCACAGGGAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATQPSGG*HHREKG
Trigger: GCCTTTCTCCCTGTGGTGTCATCCTCCAGAAGGCTG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGGGACTGGGAAGCACTaGGCATTTTCTACCCAGGCC +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKGTGKH*AFSTQA
Trigger: GGCCTGGGTAGAAAATGCCCAGTGCTTCCCAGTCCC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGCAGGGCTGGGGAGCTaGCATCTCACAAGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSAGLGS*HLTSRS
Trigger: AGACCTGCTTGTGAGATGGCAGCTCCCCAGCCCTGC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGCATACAAACTCTCCTaGCTGCTCCTCCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSAYKLS*LLLLGP
Trigger: GGGGCCCAGGAGGAGCAGGCAGGAGAGTTTGTATGC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGAAGCAGACTGGGTGTaGGGCCACAATGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFEADWV*GHNEGR
Trigger: CCTCCCCTCATTGTGGCCCCACACCCAGTCTGCTTC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCACAGGCGCAGGGCTTTaGGAGCCCAAGCTTGACTTG +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFTGAGL*EPKLDL
Trigger: CAAGTCAAGCTTGGGCTCTCAAAGCCCTGCGCCTGT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTGGGATTACAGGTGTaGGCCACAGCTGGATGGTCC +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLGLQV*ATAGWS
Trigger: GGACCATCCAGCTGTGGCTCACACCTGTAATCCCAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACCTACTGCCTGGATGTaGACTCCAGCTCTACCACTT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATPTAWM*TPALPL
Trigger: AAGTGGTAGAGCTGGAGTTCACATCCAGGCAGTAGG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTCTGCCTCAGCCTCCTaGGTAGGGATTTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFSASAS*VGISGA
Trigger: GGCACCTGAAATCCCTACTCAGGAGGCTGAGGCAGA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTAAGAGATTGCCATTaGGGCTGGATGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLRDCH*GWMRWL
Trigger: GAGCCACCGCATCCAGCCTCAATGGCAATCTCTTAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGGCTCACTGTATTCTTaGCCTCCAGGGCTCAATCGA +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATGSLYS*PPGLNR
Trigger: TCGATTGAGCCCTGGAGGTCAAGAATACAGTGAGCC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGTTCAAGCGATTCTCTaGCTCAGCCTCCTGAGTAGG +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKVQAIL*LSLLSR
Trigger: CCTACTCAGGAGGCTGAGGCAGAGAATCGCTTGAAC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGTTCAAAGTGGAGCATaGAGGCTCCTGCTGATTGGG +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKVQSGA*RLLLIG
Trigger: CCCAATCAGCAGGAGCCTCCATGCTCCACTTTGAAC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACTCTGTCACCCAGGCTaGAGTGGCACAGTGTACAAT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLCHPG*SGTVYN
Trigger: ATTGTACACTGTGCCACTCCAGCCTGGGTGACAGAG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATACCTGCTGGATACCTaGGAAGCCAGACTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATYLLDT*EARLCV
Trigger: CACACAGAGTCTGGCTTCCCAGGTATCCAGCAGGTA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACTGACTCGCCTTTCCTaGGCATTAGACATCCATCAC +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLTRLS*ALDIHH
Trigger: GTGATGGATGTCTAATGCTCAGGAAAGGCGAGTCAG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTCCTCCCTTGGTCCTaGCTGGATTCTTCTACCCTG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLLPWS*LDSSTL
Trigger: CAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAGCAGCAACTCATCTTaGTCTGAGTGTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATSSNSS*SECGQC
Trigger: ACACTGCCCACACTCAGAGCAAGATGAGTTGCTGCT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATGTCGCCACAGCAACTaGCCAGGCCCTGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKCRHSN*PGPVGI
Trigger: GATGCCCACAGGGCCTGGGCAGTTGCTGTGGCGACA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAACCTTATGTCTCTGCTaGCCTCTGCCTAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATTLCLC*PLPNGL
Trigger: AAGGCCATTAGGCAGAGGGCAGCAGAGACATAAGGT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGGCCGAGACAACTCTTaGATGCCAATCCTGATCTCT +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKGRDNS*MPILIS
Trigger: AGAGATCAGGATTGGCATCCAAGAGTTGTCTCGGCC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGCAGGTGATATGAGTTaGGGAGTCAGGTCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATAGDMS*GVRSGE
Trigger: TTCTCCAGACCTGACTCCCCAACTCATATCACCTGC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACTTGGATGCCAATCCTaGTCTCTCAGGTTTGTTTGG +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLGCQS*SLRFVW
Trigger: CCAAACAAACCTGAGAGATCAGGATTGGCATCCAAG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAGAACCACTGCCCTCTaGAGCAACTGTATTATACCC +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKRTTAL*SNCIIP
Trigger: GGGTATAATACAGTTGCTTCAGAGGGCAGTGGTTCT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCCACAGGATGCTACTTaGTTCCCCAACTATGGCAGG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSPQDAT*FPNYGR
Trigger: CCTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATCTTCCAAGAGCCCCTaGAACAGTTTCTCAAAGGTG +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATSSKSP*NSFSKV
Trigger: CACCTTTGAGAAACTGTTTCAGGGGCTCTTGGAAGA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTGGTCTGGAACTCCTaGCCTCAAATGATCCGCATG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLVWNS*PQMIRM
Trigger: CATGCGGATCATTTGAGGTCAGGAGTTCCAGACCAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTCCAGGCTTTTAGCTaGATGGCAGAGTTTGTCCTG +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATFQAFS*MAEFVL
Trigger: CAGGACAAACTCTGCCATGCAGCTAAAAGCCTGGAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATGGATTAGATTTGCCTaGCTAGCTCTGCCTGATTGG +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATWIRFA*LALPDW
Trigger: CCAATCAGGCAGAGCTAGGCAGGCAAATCTAATCCA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGGCTTCCACCAGAAGTaGTTTCCCACACTCTCTGGT +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFGFHQK*FPTLSG
Trigger: ACCAGAGAGTGTGGGAAACCACTTCTGGTGGAAGCC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp AACCTCCAGCCTAGAATAGTCAGGCATGGACCATCCAAACACAAATaGCTAAGATGCTTTCTGGCAGCCTCAGAAACCAGGACCATACGC +
Preference number: 2 (lower is better)
Translates to: NLQPRIVRHGPSKHK*LRCFLAASETRTIR
Trigger: GCGTATGGTCCTGGTTTCTGAGGCTGCCAGAAAGCATCTTAGCAATTTGTGTTTGGATGGTCCATGCCTGACTATTCTAGGCTGGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp TCATGCTACAGAGCTGCTCATGGCATTTTCCTGGACTCTCCTCCCTaGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTC +
Preference number: 2 (lower is better)
Translates to: SCYRAAHGIFLDSPP*VLTGFFYPDPLSKF
Trigger: GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGAGTCCAGGAAAATGCCATGAGCAGCTCTGTAGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCAACTCATCTTGCTCTaGGTGTGGGCAGTGTGTAAC +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFQLILL*VWAVCN
Trigger: GTTACACACTGCCCACACTCAGAGCAAGATGAGTTG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCAATTGGCATGCCCCTaGAGAATGTGTGCGTGTCAA +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFQLACP*RMCACQ
Trigger: TTGACACGCACACATTCTTCAGGGGCATGCCAATTG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGCCCAGAGTCACAGTTaGTTTAATGACAGAGTCCGG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSAQSHS*FNDRVR
Trigger: CCGGACTCTGTCATTAAATCAACTGTGACTCTGGGC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCTGATGGGCCCTGCTTaGTCACATGCTCCGTTTATT +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLMGPA*SHAPFI
Trigger: AATAAACGGAGCATGTGATCAAGCAGGGCCCATCAG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAGTCCAGTCAGTAGTTaGCTCTCAAGATGGCGGATG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSPVSS*LSRWRM
Trigger: CATCCGCCATCTTGAGAGTCAACTACTGACTGGACT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATCACCCAGACTGGAATaGAGTGGCATAATTACAGCT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATSPRLE*SGIITA
Trigger: AGCTGTAATTATGCCACTGCATTCCAGTCTGGGTGA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCCAAGTCCAAAGCTCTaGTCTCTGCATTGCATCAAA +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKPSPKL*SLHCIK
Trigger: TTTGATGCAATGCAGAGAGCAGAGCTTTGGACTTGG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCACACCCAGAACCACTaGCCTCTGAAGCAACTGTAT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSHTQNH*PLKQLY
Trigger: ATACAGTTGCTTCAGAGGGCAGTGGTTCTGGGTGTG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACAATCAGCTGGAAGCTaGTGCCTTTCATTTGACAGA +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATQSAGS*CLSFDR
Trigger: TCTGTCAAATGAAAGGCAGCAGCTTCCAGCTGATTG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAATGATAAGACTGCCCTaGCCTATACAGTTTTGCCAC +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATMIRLP*PIQFCH
Trigger: GTGGCAAAACTGTATAGGGCAGGGCAGTCTTATCAT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACTCCTACTTACACAATaGCCCTTCTCTTGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLLLTQ*PFSCSF
Trigger: AAAGGAGCAAGAGAAGGGGCATTGTGTAAGTAGGAG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCTCACTTTACGCAATTaGCATGCCCCTGAAGAATGT +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLTLRN*HAPEEC
Trigger: ACATTCTTCAGGGGCATGCCAATTGCGTAAAGTGAG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCAGACTGGAATGCAGTaGCATAATTACAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKQTGMQ*HNYSSL
Trigger: CAGTGAGCTGTAATTATGCCACTGCATTCCAGTCTG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAACTCTAAGAATCCTTaGGAGCCTGGTACTACCAGA +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATNSKNP*EPGTTR
Trigger: TCTGGTAGTACCAGGCTCCCAAGGATTCTTAGAGTT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTGGGGAGTCAGGTCTaGAGAATGGTCTTATTCTGT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLGSQV*RMVLFC
Trigger: ACAGAATAAGACCATTCTCCAGACCTGACTCCCCAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATGTCATCAGTGTCCATaGAGAACTGCTTCTCACCTT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATCHQCP*RTASHL
Trigger: AAGGTGAGAAGCAGTTCTCCATGGACACTGATGACA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp CCATGGTCAGAAAAGTTAATCAAGTCACTCTTCACAAATGCCCCATaGCTGGAGCATAGAGGCTGTTCAAAGTGGAGCATGGAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: PWSEKLIKSLFTNAP*LEHRGCSKWSMEAP
Trigger: AGGAGCCTCCATGCTCCACTTTGAACAGCCTCTATGCTCCAGCAATGGGGCATTTGTGAAGAGTGACTTGATTAACTTTTCTGACCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp TTTGCCTGTGCTGTCATCAGTGTCCATGGAGAACTGCTTCTCACCTaGAGAAATCCCTCTTCTTCGTTCCTTCAGGTACAAGAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: FACAVISVHGELLLT*RNPSSSFLQVQEER
Trigger: CCTCTCTTCTTGTACCTGAAGGAACGAAGAAGAGGGATTTCTCAAGGTGAGAAGCAGTTCTCCATGGACACTGATGACAGCACAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp TGGATTAGATTTGCCTGCCTAGCTCTGCCTGATTGGGATTACACATaGTGTAGTGCCAACATCACACGTTCGGCATCTACTGTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: WIRFACLALPDWDYT*CSANITRSASTVCA
Trigger: TGCACACACAGTAGATGCCGAACGTGTGATGTTGGCACTACACAATGTGTAATCCCAATCAGGCAGAGCTAGGCAGGCAAATCTAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp TCAAGCTCCATCTCCTACTTACACAATGCCCCTTCTCTTGCTCCTTaGCTCATGGTGTTTACACTGGCTTTCTCCAGTCTCTGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: SSSISYLHNAPSLAP*LMVFTLAFSSLWFS
Trigger: TGAGAACCAGAGACTGGAGAAAGCCAGTGTAAACACCATGAGCAAAGGAGCAAGAGAAGGGGCATTGTGTAAGTAGGAGATGGAGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTTGAGAGCCCAAGCTTaGCTTGTAGTGAGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLRAQA*LVVRES
Trigger: GCTTTCTCTCACTACAAGTCAAGCTTGGGCTCTCAA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAACTCCTCCTGCCCGCTaGCTTTTGAGGTGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGTPPAR*LLRWLR
Trigger: CCTCAGCCACCTCAAAAGTCAGCGGGCAGGAGGAGT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACACCTGGGATTAGTCTaGGTAGTTGAGCAATTTGTT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATHLGLV*VVEQFV
Trigger: AACAAATTGCTCAACTACTCAGACTAATCCCAGGTG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGCCACTTGTCTTTGGTaGTATCATCGGAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSATCLW*YHRSHV
Trigger: AACATGGCTCCGATGATATCACCAAAGACAAGTGGC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAATCAAAGGAAGAGGTaGTCAGCCAAGCCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFNQRKR*SAKPPN
Trigger: GTTTGGAGGCTTGGCTGATCACCTCTTCCTTTGATT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCAAAGCTCTGCTCTCTaGATTGCATCAAAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKQSSAL*IASKKA
Trigger: TGCTTTCTTTGATGCAATGCAGAGAGCAGAGCTTTG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGACCTTGGAGCCTACTaGCTGGATGTGAACTCCAGC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKDLGAY*LDVNSS
Trigger: GCTGGAGTTCACATCCAGGCAGTAGGCTCCAAGGTC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTCACAAATGCCCCATTaGTGGAGCATAGAGGCTGTT +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFSQMPH*WSIEAV
Trigger: AACAGCCTCTATGCTCCAGCAATGGGGCATTTGTGA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAACAGAGCTTGAAAAGTaGTTCTGTGTTGGATCTTGC +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATTELEK*FCVGSC
Trigger: GCAAGATCCAACACAGAAGCACTTTTCAAGCTCTGT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACACAAATTGCTAAGATaGTTTCTGGCAGCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATHKLLR*FLAASE
Trigger: TTCTGAGGCTGCCAGAAAGCATCTTAGCAATTTGTG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCAATGCCCCTTCTCTTaGTCCTTTGCTCATGGTGTT +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFQCPFS*SFAHGV
Trigger: AACACCATGAGCAAAGGAGCAAGAGAAGGGGCATTG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACCCATCACAGCTCACTaGTCTGTTCATCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKPITAH*SVHPGP
Trigger: TGGGCCTGGATGAACAGAGCAGTGAGCTGTGATGGG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCAAATGCCCCATTGCTaGAGCATAGAGGCTGTTCAA +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFQMPHC*SIEAVQ
Trigger: TTGAACAGCCTCTATGCTCCAGCAATGGGGCATTTG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCACTGAATCTTTCTGCTaGGCTTCTGGCCAGGAACTT +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFTESFC*ASGQEL
Trigger: AAGTTCCTGGCCAGAAGCCCAGCAGAAAGATTCAGT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTCACTAGAATCACCTaGTTTGGGTTAGGGAGTAGT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATFTRIT*FGLGSS
Trigger: ACTACTCCCTAACCCAAACCAGGTGATTCTAGTGAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAGGTCTCTGGAATCCTaGTTTTCTGAATGTCGGAGG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSRSLES*FSECRR
Trigger: CCTCCGACATTCAGAAAACCAGGATTCCAGAGACCT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCCTAGACTCTCACAGTaGCTCCACCTTAAATGTCCA +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSPRLSQ*LHLKCP
Trigger: TGGACATTTAAGGTGGAGCCACTGTGAGAGTCTAGG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGAGTGTGTATTGAGGTaGAGGGAAGGAGCTGAAAGA +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSECVLR*REGAER
Trigger: TCTTTCAGCTCCTTCCCTCCACCTCAATACACACTC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATGGGATCGGGATCTCTaGGTTCAATTTTCTCAATTT +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATWDRDL*VQFSQF
Trigger: AAATTGAGAAAATTGAACTCAGAGATCCCGATCCCA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATGTTGCCTCAGAGACTaGCTCGCCTTTCCTGAGCAT +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKCCLRD*LAFPEH
Trigger: ATGCTCAGGAAAGGCGAGTCAGTCTCTGAGGCAACA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAATTGCGCTATTACTGTaGTTGATGAACACTATGCTG +
Preference number: 2 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATIALLL*LMNTML
Trigger: CAGCATAGTGTTCATCAATCACAGTAATAGCGCAAT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAATAATGCTATAGACTaGGGAGACAATGAGTCACGA +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKNNAID*GDNESR
Trigger: TCGTGACTCATTGTCTCCTCAGTCTATAGCATTATT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGCCGGCAGGAGCAGGTaGTATGAGTTGGGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIAGRSR*YELGSQ
Trigger: CTGACTCCCCAACTCATATCACCTGCTCCTGCCGGC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTTAGGGAAGGATTCTaGTGGGCCCTGCTTGATCAC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLREGF*WALLDH
Trigger: GTGATCAAGCAGGGCCCATCAGAATCCTTCCCTAAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCACGGACTAGTGTTTTaGATTTACTTCCAGCCACAG +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFHGLVF*IYFQPQ
Trigger: CTGTGGCTGGAAGTAAATGCAAAACACTAGTCCGTG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTATACTGAATCTTTCTaGTGGGCTTCTGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFYTESF*WASGQE
Trigger: TTCCTGGCCAGAAGCCCAGCAGAAAGATTCAGTATA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTTGACAAAGATGGTGTaGAAAATGAGCTCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLTKMV*KMSSCP
Trigger: GGGACAGGAGCTCATTTTCCACACCATCTTTGTCAA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGGTGTGAGCCACAGCTaGATGGTCCTTTTATTTAGT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSGVSHS*MVLLFS
Trigger: ACTAAATAAAAGGACCATCCAGCTGTGGCTCACACC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGGGAAAGCCAGCACTTaGGACTGGGAAGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIGKAST*DWEALG
Trigger: GCCCAGTGCTTCCCAGTCCCAAGTGCTGGCTTTCCC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCAGCTTGAACCTTGGTaGCTAATTGCGCTATTACTG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSQLEPW*LIALLL
Trigger: CAGTAATAGCGCAATTAGCCACCAAGGTTCAAGCTG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAGCCTCCCAAATAGCTaGGATTACAGATGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKSLPNS*DYRCPP
Trigger: TGGCGGGCATCTGTAATCCCAGCTATTTGGGAGGCT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAAGTCCTCCTTGAGGTaGAATGCATTTCTGGCACAT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSKSSLR*NAFLAH
Trigger: ATGTGCCAGAAATGCATTCCACCTCAAGGAGGACTT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp CACTCTTTCTCACCTTATGTCTCTGCTGCCCTCTGCCTAATGGCCTaGTTTTCGCTTACTATAGACCAGAATTTACACAGGGATGGAGAA +
Preference number: 2 (lower is better)
Translates to: HSFSPYVSAALCLMA*FSLTIDQNLHRDGE
Trigger: TTCTCCATCCCTGTGTAAATTCTGGTCTATAGTAAGCGAAAACAAGGCCATTAGGCAGAGGGCAGCAGAGACATAAGGTGAGAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTCTTCTTTTGTAAAGTaGTTCTGCACCCGTGTAGTG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSSFVK*FCTRVV
Trigger: CACTACACGGGTGCAGAATCACTTTACAAAAGAAGA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCACATATTACACAGCTTaGACCTTGGTGGCTAATTGC +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSTYYTA*TLVANC
Trigger: GCAATTAGCCACCAAGGTTCAAGCTGTGTAATATGT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGGATGAGTTTTCTGTaGAGACTGGGGTTCAAACAA +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFRMSFL*RLGFKQ
Trigger: TTGTTTGAACCCCAGTCTTCACAGAAAACTCATCCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTGCTCAGGGACTTGCTaGTTTACTTTGCTGTCTATT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSCSGTC*FTLLSI
Trigger: AATAGACAGCAAAGTAAATCAGCAAGTCCCTGAGCA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATGGCAGAGTTTGTCCTaGGAAAGATCTTGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKWQSLS*ERSCPA
Trigger: AGCTGGGCAAGATCTTTCTCAGGACAAACTCTGCCA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAACTATTCTGCCTTATaGCCTTCTGAAACCTCATCC +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFNYSAL*PSETSS
Trigger: GGATGAGGTTTCAGAAGGTCATAAGGCAGAATAGTT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTGCCTAGCTCTGCCTaGTTGGGATTACACATTGTG +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLPSSA*LGLHIV
Trigger: CACAATGTGTAATCCCAATCAGGCAGAGCTAGGCAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAATTACTGGGACCATCTaGAGAGAACCCCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGITGTI*REPQGQ
Trigger: CTGCCCCTGGGGTTCTCTGCAGATGGTCCCAGTAAT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGCGAGAGACTCCTCCTaGCCGCTGACTTTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIARDSS*PLTFEV
Trigger: CACCTCAAAAGTCAGCGGGCAGGAGGAGTCTCTCGC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTCAAGTGTTCCTCCTaGCTTGGCTTTCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLKCSS*LGFPKC
Trigger: GCACTTTGGAAAGCCAAGGCAGGAGGAACACTTGAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAACACAATACTGTATTaGACTTTTGGCCACTTTTGC +
Preference number: 2 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKNTILY*TFGHFC
Trigger: GCAAAAGTGGCCAAAAGTGCAATACAGTATTGTGTT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAACCCTGCCATTTACTaGCTTCTCTATGTAGTCTTG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSNPAIY*LLYVVL
Trigger: CAAGACTACATAGAGAAGGCAGTAAATGGCAGGGTT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACAGGGAGAAGCAGACTaGGTGTGGGGCCACAATGAG +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIQGEAD*VWGHNE
Trigger: CTCATTGTGGCCCCACACCCAGTCTGCTTCTCCCTG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAAAGTGGAAAGTAACTaGCCCAGAGTCACAGTTGAT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSKVESN*PRVTVD
Trigger: ATCAACTGTGACTCTGGGCCAGTTACTTTCCACTTT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCATCAAGACTCAAAAGTaGAAAGTAACTGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSIKTQK*KVTGPE
Trigger: CTCTGGGCCAGTTACTTTCCACTTTTGAGTCTTGAT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCACACAGCTTGAACCTTaGTGGCTAATTGCGCTATTA +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFTQLEP*WLIALL
Trigger: TAATAGCGCAATTAGCCACCAAGGTTCAAGCTGTGT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACCTCCCATAAAGAGATaGCATCTATTTCCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKPPIKR*HLFPPP
Trigger: GGGAGGGGGAAATAGATGCCATCTCTTTATGGGAGG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGGGTTCAAACAAGTTTaGGGGCAGAATCAAGAGTTT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSGFKQV*GQNQEF
Trigger: AAACTCTTGATTCTGCCCCCAAACTTGTTTGAACCC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGTACAATCATGGCTATaGCTCACTGTATTCTTGACC +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSVQSWL*LTVFLT
Trigger: GGTCAAGAATACAGTGAGCCATAGCCATGATTGTAC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTACAGAGCTGCTCATaGCATTTTCCTGGACTCTCC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLQSCS*HFPGLS
Trigger: GGAGAGTCCAGGAAAATGCCATGAGCAGCTCTGTAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTATAGCAGGAACCTCTaGCATTTTGTAGGGGATAAT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSYSRNL*HFVGDN
Trigger: ATTATCCCCTACAAAATGTCAGAGGTTCCTGCTATA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATGTTCTCAAATAGTCTaGAGACGTCACAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKCSQIV*RRHRAE
Trigger: CTCTGCCCTGTGACGTCTTCAGACTATTTGAGAACA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAGAGTCCGGGTCTCCTaGTTCCAAGTCCAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRVRVS*FQVQSS
Trigger: AGAGCTTTGGACTTGGAATCAGGAGACCCGGACTCT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAATATCCAGGCGTCATaGGGACCTTGGTCTGAAATC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKNIQAS*GPWSEI
Trigger: GATTTCAGACCAAGGTCCTCATGACGCCTGGATATT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCACTTGTGTTCATCAGTaGGACATTGGCAAATGTGAT +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFTCVHQ*DIGKCD
Trigger: ATCACATTTGCCAATGTCTCACTGATGAACACAAGT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAACAGACATGAGCCACTaGGCCAAGCCCTATTTCTCC +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGTDMSH*AKPYFS
Trigger: GGAGAAATAGGGCTTGGCTCAGTGGCTCATGTCTGT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGTTAAGTTTGAGACATaGAAATGTCCAGTAGGCACT +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSVKFET*KCPVGT
Trigger: AGTGCCTACTGGACATTTTCATGTCTCAAACTTAAC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGTCAGCCTCATTAGGTaGAAATATGTTGGTTCAAGA +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSVSLIR*KYVGSR
Trigger: TCTTGAACCAACATATTTTCACCTAATGAGGCTGAC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACCAGCATGTAGTGGCTaGTTCTTCTTGGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKPACSG*FFLAAF
Trigger: AAAAGCAGCCAAGAAGAATCAGCCACTACATGCTGG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTTCCAGCCACAGGATaGTACTTGATTCCCCAACTA +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLPATG*YLIPQL
Trigger: TAGTTGGGGAATCAAGTAGCATCCTGTGGCTGGAAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGAAGAAAGGTTTTCTaGAATCACTGCCAGTTCCAT +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFRRKVF*NHCQFH
Trigger: ATGGAACTGGCAGTGATTCCAGAAAACCTTTCTTCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGCCAGCACTTGGGACTaGGAAGCACTGGGCATTTTC +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIASTWD*EALGIF
Trigger: GAAAATGCCCAGTGCTTCCCAGTCCCAAGTGCTGGC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGAGGCTCCTGCTGATTaGGAGCCTGATAAGTGTTGC +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGEAPAD*EPDKCC
Trigger: GCAACACTTATCAGGCTCCCAATCAGCAGGAGCCTC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAGAGGCTGTTCAAAGTaGAGCATGGAGGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRGCSK*SMEAPA
Trigger: AGCAGGAGCCTCCATGCTCCACTTTGAACAGCCTCT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAACTCCTGCTACCATATaGACAAATCTGGGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKTPATI*TNLGSL
Trigger: AAGGCTGCCCAGATTTGTCCATATGGTAGCAGGAGT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGGCCCAACTGTTCTTaGAGCCATCTTTTCTATATA +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFRPNCS*SHLFYI
Trigger: TATATAGAAAAGATGGCTCCAAGAACAGTTGGGCCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAAGCCAGACTCTGTGTaGACAGTGATCCCTAGTCAT +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKKPDSV*TVIPSH
Trigger: ATGACTAGGGATCACTGTCCACACAGAGTCTGGCTT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp GTCTTCCTCATCTGTACTGGAAATAATAAAACCCACATCACAGTGTaGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTGCTTTGGGA +
Preference number: 2 (lower is better)
Translates to: VFLICTGNNKTHITV*CQRSSGHGWESALG
Trigger: TCCCAAAGCACTTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTATTATTTCCAGTACAGATGAGGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAAGGAAAACTTTCTATaGGAGTTGACAAAGATGGTG +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSKENFL*ELTKMV
Trigger: CACCATCTTTGTCAACTCTCATAGAAAGTTTTCCTT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAAGCTATACGTTTCATaGAAGCAAGAACTGTGTCTA +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFKLYVS*KQELCL
Trigger: TAGACACAGTTCTTGCTTTCATGAAACGTATAGCTT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATTCAGAAAACAACAATaGACTCCTAGCCAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKFRKQQ*TPSQAV
Trigger: GACTGCCTGGCTAGGAGTTCATTGTTGTTTTCTGAA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGTTTTCTGGAATCACTaGCAGTTCCATGTCATTATT +
Preference number: 2 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFVFWNH*QFHVII
Trigger: AATAATGACATGGAACTGGCAGTGATTCCAGAAAAC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGAGCCTGATAAGTGTTaGCTGGCAGAGGCAGATACA +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGEPDKC*LAEADT
Trigger: TGTATCTGCCTCTGCCAGGCAACACTTATCAGGCTC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGGTCTGGTTGTCTGTTaGCCAGTAGACAAGCTTGCC +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIGLVVC*PVDKLA
Trigger: GGCAAGCTTGTCTACTGGGCAACAGACAACCAGACC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATTCTACCCAGGCCCATaGGATCTGTTGCCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIFYPGP*DLLPQR
Trigger: TCTCTGAGGCAACAGATCCCATGGGCCTGGGTAGAA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATATGCTGCAATCAGCTaGAAGCTGCTGCCTTTCATT +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKYAAIS*KLLPFI
Trigger: AATGAAAGGCAGCAGCTTCCAGCTGATTGCAGCATA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGAAAGTCTATATCAGTaGGATTTTCTGAATGACCCA +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSESLYQ*DFLNDP
Trigger: TGGGTCATTCAGAAAATCCCACTGATATAGACTTTC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp CTCTTGGTATGTGATCCAAGTCTCGTAATCTCTCTGGATCATAGTTaGTCTATAAAAGATGCAGCCCAGAATGTGGTTAAGAGCACAGAC +
Preference number: 2 (lower is better)
Translates to: LLVCDPSLVISLDHS*SIKDAAQNVVKSTD
Trigger: GTCTGTGCTCTTAACCACATTCTGGGCTGCATCTTTTATAGACAAACTATGATCCAGAGAGATTACGAGACTTGGATCACATACCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp TGCTCTATTCTCAACAAGTGTCAGAGATTCTTGTTTCTCTTCCTCTaGTTACTCTTTAGGAACCTCCAGCCTAGAATAGTCAGGCATGGA +
Preference number: 2 (lower is better)
Translates to: CSILNKCQRFLFLFL*LLFRNLQPRIVRHG
Trigger: TCCATGCCTGACTATTCTAGGCTGGAGGTTCCTAAAGAGTAACAAGAGGAAGAGAAACAAGAATCTCTGACACTTGTTGAGAATAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAATGAGGACCTTGGTCTaGAATCCTAGTACTAGAGTA +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKMRTLV*NPSTRV
Trigger: TACTCTAGTACTAGGATTTCAGACCAAGGTCCTCAT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACCAGGGCTGTTTCCTTaGCTGCCAAATTGGGATAAT +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGPGLFP*LPNWDN
Trigger: ATTATCCCAATTTGGCAGTCAAGGAAACAGCCCTGG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATCAGCTGGAAGCTGCTaGCTTTCATTTGACAGAAAT +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKSAGSC*LSFDRN
Trigger: ATTTCTGTCAAATGAAAGGCAGCAGCTTCCAGCTGA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGAACTGTGTCTAATTTaGCACTACTTGTATCCTGGC +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKELCLI*HYLYPG
Trigger: GCCAGGATACAAGTAGTGGCAAATTAGACACAGTTC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAATCCTGTTTCCCCCTTaGAGATCTTACAGAAAACAG +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKILFPP*RSYRKQ
Trigger: CTGTTTTCTGTAAGATCTGCAAGGGGGAAACAGGAT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTTGTTCCCTTGAACTaGCTCCTGAGTTTTACAGAA +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLVPLN*LLSFTE
Trigger: TTCTGTAAAACTCAGGAGCCAGTTCAAGGGAACAAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGAATCCTTGGGAGCCTaGTACTACCAGAGGGTATAT +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGESLGA*YYQRVY
Trigger: ATATACCCTCTGGTAGTACCAGGCTCCCAAGGATTC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGAGACAATATATTTTTaGTTGCAAGGGATAAGAACC +
Preference number: 2 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSETIYF*LQGIRT
Trigger: GGTTCTTATCCCTTGCAACCAAAAATATATTGTCTC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp TATACATCTTTTCTCCAGTGGACTTGGAATCTGATGGCCCTGGAATaGAATCCTAATGTGGCTTTAACACTCTCTTGGTATGTGATCCAA +
Preference number: 2 (lower is better)
Translates to: YTSFLQWTWNLMALE*NPNVALTLSWYVIQ
Trigger: TTGGATCACATACCAAGAGAGTGTTAAAGCCACATTAGGATTCAATTCCAGGGCCATCAGATTCCAAGTCCACTGGAGAAAAGATGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp AAACAAATGGGACTGTGCTCTATTCTCAACAAGTGTCAGAGATTCTaGTTTCTCTTCCTCTTGTTACTCTTTAGGAACCTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: KQMGLCSILNKCQRF*FLFLLLLFRNLQPR
Trigger: TCTAGGCTGGAGGTTCCTAAAGAGTAACAAGAGGAAGAGAAACAAGAATCTCTGACACTTGTTGAGAATAGAGCACAGTCCCATTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGATGTCTACAGGGGTTaGAAGATAGTTTACTACATG +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKDVYRG*KIVYYM
Trigger: CATGTAGTAAACTATCTTCCAACCCCTGTAGACATC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp ACATCAAAGAAGGAAGTACAGTTAGAACAGAAGGCCCAACTGTTCTaGGAGCCATCTTTTCTATATATACTGAATCTTTCTGCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: TSKKEVQLEQKAQLF*EPSFLYILNLSAGL
Trigger: AAGCCCAGCAGAAAGATTCAGTATATATAGAAAAGATGGCTCCAAGAACAGTTGGGCCTTCTGTTCTAACTGTACTTCCTTCTTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAAGCACGTTGTGCTTTaGGAAGTTGTCTTTAACAGG +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGKHVVL*EVVFNR
Trigger: CCTGTTAAAGACAACTTCTCAAAGCACAACGTGCTT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAAGTCCCAGGAGTCATaGTTCCTGTTCTCAAATAGT +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGKSQES*FLFSNS
Trigger: ACTATTTGAGAACAGGAATCATGACTCCTGGGACTT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAGACTGAGGAGACAATaGGTCACGAATCACTTTGTA +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRLRRQ*VTNHFV
Trigger: TACAAAGTGATTCGTGACTCATTGTCTCCTCAGTCT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACTCTGCTCTCTGCATTaGATCAAAGAAAGCAACATC +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGLCSLH*IKESNI
Trigger: GATGTTGCTTTCTTTGATGCAATGCAGAGAGCAGAG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATTCAAGCAATTCTTGTaGTTCAGCCTCCCAAATAGC +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGFKQFL*FSLPNS
Trigger: GCTATTTGGGAGGCTGAAGCACAAGAATTGCTTGAA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACTGAGTATCTATTACTaGGACCATCTGCAGAGAACC +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIILSIYY*DHLQRT
Trigger: GGTTCTCTGCAGATGGTCCCAGTAATAGATACTCAG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACAGTTAAGAACCAACTaGAAAGCAGCAAAATCAGAA +
Preference number: 2 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKQLRTN*KAAKSE
Trigger: TTCTGATTTTGCTGCTTTCCAGTTGGTTCTTAACTG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGCTTTAACACTCTCTTaGTATGTGATCCAAGTCTCG +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGALTLS*YVIQVS
Trigger: CGAGACTTGGATCACATACCAAGAGAGTGTTAAAGC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAACATCTTTTCTCCAGTaGACTTGGAATCTGATGGCC +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIITSFLQ*TWNLMA
Trigger: GGCCATCAGATTCCAAGTCCACTGGAGAAAAGATGT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATTGATTCCCCAACTATaGCAGGTAATTGGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIILIPQL*QVIGCR
Trigger: CCTACACCCAATTACCTGCCATAGTTGGGGAATCAA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGAGCCTCATTTGAAATaGAAAGAAAACTGGCGAGAG +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIEPHLK*KENWRE
Trigger: CTCTCGCCAGTTTTCTTTTCATTTCAAATGAGGCTC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGTTTGGTGGATCAACTaGAATGGTGAAGGTGAAAAA +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGVWWIN*NGEGEK
Trigger: TTTTTCACCTTCACCATTTCAGTTGATCCACCAAAC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAATGATGCTAGTGGGTaGCTTGAGCATGTTAACTTT +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGNDASG*LEHVNF
Trigger: AAAGTTAACATGCTCAAGTCACCCACTAGCATCATT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATGCCCTATACAGTTTTaGCACTTGTCTTTGGTGATA +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGCPIQF*HLSLVI
Trigger: TATCACCAAAGACAAGTGGCAAAACTGTATAGGGCA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATTTCCTTCCATTCTTTaGATGTCAACCTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGFPSIL*MSTFPS
Trigger: AGAAGGGAAGGTTGACATCCAAAGAATGGAAGGAAA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGAAACAAGCACGTTGTaGTTTGAGAAGTTGTCTTTA +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGETSTL*FEKLSL
Trigger: TAAAGACAACTTCTCAAAGCACAACGTGCTTGTTTC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAACTTCTCAGTTAGACTaGTCAAGAGCAGTTAAAAGA +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGTSQLD*SRAVKR
Trigger: TCTTTTAACTGCTCTTGAGCAGTCTAACTGAGAAGT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAACCTTGGTGGCTAATTaGGCTATTACTGTGATTGAT +
Preference number: 2 (lower is better)
Translates to: LSVLTASRAFPLEYFVIITLVAN*AITVID
Trigger: ATCAATCACAGTAATAGCGCAATTAGCCACCAAGGT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGGCTGTTTCCTTGACTaGCAAATTGGGATAATAATA +
Preference number: 2 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGGCFLD*QIGIII
Trigger: TATTATTATCCCAATTTGGCAGTCAAGGAAACAGCC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 90 bp GAGATATTCTTTCTCCTATCCTCAGTCTTCTTGGGGCATTTGTATTaGATCAGTCATCAAAGGTTAGTACTAAAAGGTGAAAGCTTAGTT +
Preference number: 2 (lower is better)
Translates to: EIFFLLSSVFLGHLY*ISHQRLVLKGESLV
Trigger: AACTAAGCTTTCACCTTTTAGTACTAACCTTTGATGACTGATCAAATACAAATGCCCCAAGAAGACTGAGGATAGGAGAAAGAATATCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp TCTCTGAAGATTAGCTCTTCCTGTCGCCACAGCAACTaGCCAGGCCCTGTGGGCATCCGTGGTAACAGGCGC +
Preference number: 3 (lower is better)
Translates to: SLKISSSCRHSN*PGPVGIRGNRR
Trigger: GCGCCTGTTACCACGGATGCCCACAGGGCCTGGGCAGTTGCTGTGGCGACAGGAAGAGCTAATCTTCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp GAGTCTGGCTCTATCGCCCAGGCTGAAGTGCAGTGGTaGGATTTAGGCTCATTGCAACCTCCTCCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: ESGSIAQAEVQW*DLGSLQPPPPG
Trigger: CCCAGGAGGAGGAGGTTGCAATGAGCCTAAATCGCACCACTGCACTTCAGCCTGGGCGATAGAGCCAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp GCTTTCTGGCAGCCTCAGAAACCAGGACCATACGCCTaGCTAAGTGATGAGGGGGTCACACAGCCTTGGCTC +
Preference number: 3 (lower is better)
Translates to: AFWQPQKPGPYA*LSDEGVTQPWL
Trigger: GAGCCAAGGCTGTGTGACCCCCTCATCACTTAGCCAGGCGTATGGTCCTGGTTTCTGAGGCTGCCAGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp ATCCAAGCAAGGAGCTTAGTGGCCGGCAGGAGCAGGTaGTATGAGTTGGGGAGTCAGGTCTGGAGAATGGTC +
Preference number: 3 (lower is better)
Translates to: IQARSLVAGRSR*YELGSQVWRMV
Trigger: GACCATTCTCCAGACCTGACTCCCCAACTCATATCACCTGCTCCTGCCGGCCACTAAGCTCCTTGCTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GTGGCCACAGAGATAGATCATCTGCTCCTGGCTCCTTaGTCTGAGGGAAGCCTCTGCTGTTCAACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: VATEIDHLLLAP*SEGSLCCSTCS
Trigger: GGAGCAGGTTGAACAGCAGAGGCTTCCCTCAGATCAAGGAGCCAGGAGCAGATGATCTATCTCTGTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp CCCCAGGGGCAGGCAAAGAATAGCAGCAACTCATCTTaGTCTGAGTGTGGGCAGTGTGTAACAGGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: PQGQAKNSSNSS*SECGQCVTGRV
Trigger: CACTCTCCCTGTTACACACTGCCCACACTCAGAGCAAGATGAGTTGCTGCTATTCTTTGCCTGCCCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp GGCTGTTCAAAGTGGAGCATGGAGGCTCCTGCTGATTaGGAGCCTGATAAGTGTTGCCTGGCAGAGGCAGAT +
Preference number: 3 (lower is better)
Translates to: GCSKWSMEAPAD*EPDKCCLAEAD
Trigger: ATCTGCCTCTGCCAGGCAACACTTATCAGGCTCCCAATCAGCAGGAGCCTCCATGCTCCACTTTGAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp AGGGAGAAAGGCCTCAACAGCCCCAGTCATCTCAGCTaGGACCCCAGACATGTGGATGTAGCTATCCTAGAC +
Preference number: 3 (lower is better)
Translates to: REKGLNSPSHLS*DPRHVDVAILD
Trigger: GTCTAGGATAGCTACATCCACATGTCTGGGGTCCCAGCTGAGATGACTGGGGCTGTTGAGGCCTTTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp ACCCAGCCCAACAAGGTCATGCTACAGAGCTGCTCATaGCATTTTCCTGGACTCTCCTCCCTTGGTCCTGAC +
Preference number: 3 (lower is better)
Translates to: TQPNKVMLQSCS*HFPGLSSLGPD
Trigger: GTCAGGACCAAGGGAGGAGAGTCCAGGAAAATGCCATGAGCAGCTCTGTAGCATGACCTTGTTGGGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp TACCATATGGACAAATCTGGGCAGCCTTCTGGAGGATaGCACCACAGGGAGAAAGGCCTCAACAGCCCCAGT +
Preference number: 3 (lower is better)
Translates to: YHMDKSGQPSGG*HHREKGLNSPS
Trigger: ACTGGGGCTGTTGAGGCCTTTCTCCCTGTGGTGTCATCCTCCAGAAGGCTGCCCAGATTTGTCCATATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp AATGCCCCATTGCTGGAGCATAGAGGCTGTTCAAAGTaGAGCATGGAGGCTCCTGCTGATTGGGAGCCTGAT +
Preference number: 3 (lower is better)
Translates to: NAPLLEHRGCSK*SMEAPADWEPD
Trigger: ATCAGGCTCCCAATCAGCAGGAGCCTCCATGCTCCACTTTGAACAGCCTCTATGCTCCAGCAATGGGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp CTCCTGCTACCATATGGACAAATCTGGGCAGCCTTCTaGAGGATGACACCACAGGGAGAAAGGCCTCAACAG +
Preference number: 3 (lower is better)
Translates to: LLLPYGQIWAAF*RMTPQGERPQQ
Trigger: CTGTTGAGGCCTTTCTCCCTGTGGTGTCATCCTCCAGAAGGCTGCCCAGATTTGTCCATATGGTAGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp GCCCTCTCTTGCTTCGAGGAAACTCCTGCTACCATATaGACAAATCTGGGCAGCCTTCTGGAGGATGACACC +
Preference number: 3 (lower is better)
Translates to: ALSCFEETPATI*TNLGSLLEDDT
Trigger: GGTGTCATCCTCCAGAAGGCTGCCCAGATTTGTCCATATGGTAGCAGGAGTTTCCTCGAAGCAAGAGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp GGAGTGGCAGTGGAGTTAGCTGTTTTGTCTACCTGCTaGATACCTGGGAAGCCAGACTCTGTGTGGACAGTG +
Preference number: 3 (lower is better)
Translates to: GVAVELAVLSTC*IPGKPDSVWTV
Trigger: CACTGTCCACACAGAGTCTGGCTTCCCAGGTATCCAGCAGGTAGACAAAACAGCTAACTCCACTGCCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGGGAAAGCCAGCACTaGGGACTGGGAAGCACTGGG +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFRESQH*GLGSTG
Trigger: CCCAGTGCTTCCCAGTCCCAAGTGCTGGCTTTCCCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GCTGGATACCTGGGAAGCCAGACTCTGTGTGGACAGTaGTCCCTAGTCATAGGAAACTTTGCCTGTGCTGTC +
Preference number: 3 (lower is better)
Translates to: AGYLGSQTLCGQ*SLVIGNFACAV
Trigger: GACAGCACAGGCAAAGTTTCCTATGACTAGGGATCACTGTCCACACAGAGTCTGGCTTCCCAGGTATCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GTTTCCAGGCTTTTAGCTGCATGGCAGAGTTTGTCCTaGGAAAGATCTTGCCCAGCTCAGCCTGGCACACAC +
Preference number: 3 (lower is better)
Translates to: VSRLLAAWQSLS*ERSCPAQPGTH
Trigger: GTGTGTGCCAGGCTGAGCTGGGCAAGATCTTTCTCAGGACAAACTCTGCCATGCAGCTAAAAGCCTGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GGAAGGAGGAAGTGCATGAGGTACCTTTCTGTCACATaGCTGGTGGCAGACCCTACTTTAACCCAGCCCAAC +
Preference number: 3 (lower is better)
Translates to: GRRKCMRYLSVT*LVADPTLTQPN
Trigger: GTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTGACAGAAAGGTACCTCATGCACTTCCTCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp CTTCCAGCCACAGGATGCTACTTGATTCCCCAACTATaGCAGGTAATTGGGTGTAGGCTTGGGGCAGGGAAT +
Preference number: 3 (lower is better)
Translates to: LPATGCYLIPQL*QVIGCRLGAGN
Trigger: ATTCCCTGCCCCAAGCCTACACCCAATTACCTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGGCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTTAAGAGCACAGACCTaGGAGCCTACTGCCTGGATG +
Preference number: 3 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLRAQT*EPTAWM
Trigger: CATCCAGGCAGTAGGCTCCAAGGTCTGTGCTCTTAA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAGGTCTGGTTGTCTGTaGCCCAGTAGACAAGCTTGC +
Preference number: 3 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKRSGCL*PSRQAC
Trigger: GCAAGCTTGTCTACTGGGCAACAGACAACCAGACCT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGTCCTGAGAAAGATCTaGCCCAGCTCAGCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFVLRKI*PSSAWH
Trigger: GTGCCAGGCTGAGCTGGGCAAGATCTTTCTCAGGAC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTCACAAATGCCCCATaGCTGGAGCATAGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATFTNAP*LEHRGC
Trigger: ACAGCCTCTATGCTCCAGCAATGGGGCATTTGTGAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGGATCTTGCCCTCTCTaGCTTCGAGGAAACTCCTGC +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFGSCPL*LRGNSC
Trigger: GCAGGAGTTTCCTCGAAGCAAGAGAGGGCAAGATCC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp GTTGGATCTTGCCCTCTCTTGCTTCGAGGAAACTCCTaGTACCATATGGACAAATCTGGGCAGCCTTCTGGA +
Preference number: 3 (lower is better)
Translates to: VGSCPLLLRGNS*YHMDKSGQPSG
Trigger: TCCAGAAGGCTGCCCAGATTTGTCCATATGGTAGCAGGAGTTTCCTCGAAGCAAGAGAGGGCAAGATCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp ACTTTAACCCAGCCCAACAAGGTCATGCTACAGAGCTaGTCATGGCATTTTCCTGGACTCTCCTCCCTTGGT +
Preference number: 3 (lower is better)
Translates to: TLTQPNKVMLQS*SWHFPGLSSLG
Trigger: ACCAAGGGAGGAGAGTCCAGGAAAATGCCATGAGCAGCTCTGTAGCATGACCTTGTTGGGCTGGGTTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp GATGAGGAGAGACGTGAGAGCTATTGTTCCTCTCTCTaGTCAGGCCTATCGAGAGGCAACTGCAGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: DEERRESYCSSL*SGLSRGNCSFC
Trigger: GCAAAAACTGCAGTTGCCTCTCGATAGGCCTGAGCAGAGAGAGGAACAATAGCTCTCACGTCTCTCCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp CACTGCTCTGTTCATCCAGGCCCAGCATGTAGTGGCTaGTTCTTCTTGGCTGCTTTTAGCCTCCAGAAGTTT +
Preference number: 3 (lower is better)
Translates to: HCSVHPGPACSG*FFLAAFSLQKF
Trigger: AAACTTCTGGAGGCTAAAAGCAGCCAAGAAGAATCAGCCACTACATGCTGGGCCTGGATGAACAGAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp GTCAGGCATGGACCATCCAAACACAAATTGCTAAGATaGTTTCTGGCAGCCTCAGAAACCAGGACCATACGC +
Preference number: 3 (lower is better)
Translates to: VRHGPSKHKLLR*FLAASETRTIR
Trigger: GCGTATGGTCCTGGTTTCTGAGGCTGCCAGAAAGCATCTTAGCAATTTGTGTTTGGATGGTCCATGCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp TCCAGTCTCTGGTTCTCAGTCCCCTTACAAAGATCCTaGATTAGATTTGCCTGCCTAGCTCTGCCTGATTGG +
Preference number: 3 (lower is better)
Translates to: SSLWFSVPLQRS*IRFACLALPDW
Trigger: CCAATCAGGCAGAGCTAGGCAGGCAAATCTAATCCAGGATCTTTGTAAGGGGACTGAGAACCAGAGACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp CTAACAAAGGCTCTGGAGCACTCTAAACTCTCATTCTaGGCTCATTCCTCACTCCTGGAGGCTGATTTCTGG +
Preference number: 3 (lower is better)
Translates to: LTKALEHSKLSF*AHSSLLEADFW
Trigger: CCAGAAATCAGCCTCCAGGAGTGAGGAATGAGCCCAGAATGAGAGTTTAGAGTGCTCCAGAGCCTTTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGCATGACATCAGAGTaGGCCGAGACAACTCTTGGA +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFSMTSE*AETTLG
Trigger: TCCAAGAGTTGTCTCGGCCAACTCTGATGTCATGCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCCAGCTAGAACCTCTTaGTACCTTTGTTTCCTCATC +
Preference number: 3 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKPARTS*YLCFLI
Trigger: GATGAGGAAACAAAGGTACAAAGAGGTTCTAGCTGG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTTTGCCACTTGTCTTaGGTGATATCATCGGAGCCA +
Preference number: 3 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATFCHLS*VISSEP
Trigger: TGGCTCCGATGATATCACCAAAGACAAGTGGCAAAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAGGCAAGAGGATCGCTaGAGGCCAGAATTTGAAACC +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSRQEDR*RPEFET
Trigger: GGTTTCAAATTCTGGCCTCAAGCGATCCTCTTGCCT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACCGTCTTGCCAAGGTTaGGATTGTTTTTGTGTGAAG +
Preference number: 3 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATPSCQG*DCFCVK
Trigger: CTTCACACAAAAACAATCCAAACCTTGGCAAGACGG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTCTGATGGGCCCTGCTaGATCACATGCTCCGTTTAT +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFSDGPC*ITCSVY
Trigger: ATAAACGGAGCATGTGATCAAGCAGGGCCCATCAGA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GCAGGCGAGCCTCACTTTACGCAATTGGCATGCCCCTaGAGAATGTGTGCGTGTCAAATTTTGGTAAATGGA +
Preference number: 3 (lower is better)
Translates to: AGEPHFTQLACP*RMCACQILVNG
Trigger: TCCATTTACCAAAATTTGACACGCACACATTCTTCAGGGGCATGCCAATTGCGTAAAGTGAGGCTCGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GCAGGGAGCCCGATAGGAAACAAGCACGTTGTGCTTTaGGAAGTTGTCTTTAACAGGATTAGCTATGCAGGC +
Preference number: 3 (lower is better)
Translates to: AGSPIGNKHVVL*EVVFNRISYAG
Trigger: GCCTGCATAGCTAATCCTGTTAAAGACAACTTCTCAAAGCACAACGTGCTTGTTTCCTATCGGGCTCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GAAGCATATACCACACAACTCAGTCCAGTCAGTAGTTaGCTCTCAAGATGGCGGATGTCACTGAGATGGCTG +
Preference number: 3 (lower is better)
Translates to: EAYTTQLSPVSS*LSRWRMSLRWL
Trigger: CAGCCATCTCAGTGACATCCGCCATCTTGAGAGTCAACTACTGACTGGACTGAGTTGTGTGGTATATGCTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GCCTGGCACACACGGGTCCATAAATTAAGTCCTCCTTaGGGTGGAATGCATTTCTGGCACATAAACATGGCT +
Preference number: 3 (lower is better)
Translates to: AWHTRVHKLSPP*GGMHFWHINMA
Trigger: AGCCATGTTTATGTGCCAGAAATGCATTCCACCTCAAGGAGGACTTAATTTATGGACCCGTGTGTGCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp CTCATGGCATTTTCCTGGACTCTCCTCCCTTGGTCCTaGCTGGATTCTTCTACCCTGATCCACTTAGTAAGT +
Preference number: 3 (lower is better)
Translates to: LMAFSWTLLPWS*LDSSTLIHLVS
Trigger: ACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGAGTCCAGGAAAATGCCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GAGCTGAAAGAAGGAGGGGATCCTTGGAAAGGGCTCTaGGAGGGGTGTATTCGTTTCATTCTGAGACGAATA +
Preference number: 3 (lower is better)
Translates to: ELKEGGDPWKGL*EGCIRFILRRI
Trigger: TATTCGTCTCAGAATGAAACGAATACACCCCTCTCAGAGCCCTTTCCAAGGATCCCCTCCTTCTTTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp CAGAATGTGGTTAAGAGCACAGACCTTGGAGCCTACTaGCTGGATGTGAACTCCAGCTCTACCACTTACTTA +
Preference number: 3 (lower is better)
Translates to: QNVVKSTDLGAY*LDVNSSSTTYL
Trigger: TAAGTAAGTGGTAGAGCTGGAGTTCACATCCAGGCAGTAGGCTCCAAGGTCTGTGCTCTTAACCACATTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp GGAGCTGCCATCTCACAAGCAGGTCTGGTTGTCTGTTaGCCAGTAGACAAGCTTGCCACTATAACATTTAAC +
Preference number: 3 (lower is better)
Translates to: GAAISQAGLVVC*PVDKLATITFN
Trigger: GTTAAATGTTATAGTGGCAAGCTTGTCTACTGGGCAACAGACAACCAGACCTGCTTGTGAGATGGCAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp CCACACTCTTTCTCACCTTATGTCTCTGCTGCCCTCTaGCTAATGGCCTTGTTTTCGCTTACTATAGACCAG +
Preference number: 3 (lower is better)
Translates to: PHSFSPYVSAAL*LMALFSLTIDQ
Trigger: CTGGTCTATAGTAAGCGAAAACAAGGCCATTAGGCAGAGGGCAGCAGAGACATAAGGTGAGAAAGAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp AAACCAGAGACCACACTCTTTCTCACCTTATGTCTCTaGTGCCCTCTGCCTAATGGCCTTGTTTTCGCTTAC +
Preference number: 3 (lower is better)
Translates to: KPETTLFLTLCL*CPLPNGLVFAY
Trigger: GTAAGCGAAAACAAGGCCATTAGGCAGAGGGCAGCAGAGACATAAGGTGAGAAAGAGTGTGGTCTCTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp TCTGTGTGGACAGTGATCCCTAGTCATAGGAAACTTTaGCTGTGCTGTCATCAGTGTCCATGGAGAACTGCT +
Preference number: 3 (lower is better)
Translates to: SVWTVIPSHRKL*LCCHQCPWRTA
Trigger: AGCAGTTCTCCATGGACACTGATGACAGCACAGGCAAAGTTTCCTATGACTAGGGATCACTGTCCACACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp GGATTAGCTATGCAGGCGAGCCTCACTTTACGCAATTaGCATGCCCCTGAAGAATGTGTGCGTGTCAAATTT +
Preference number: 3 (lower is better)
Translates to: GLAMQASLTLRN*HAPEECVRVKF
Trigger: AAATTTGACACGCACACATTCTTCAGGGGCATGCCAATTGCGTAAAGTGAGGCTCGCCTGCATAGCTAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTGTGCGTGTCAAATTTaGGTAAATGGAGGAACTCTC +
Preference number: 3 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKCACQI*VNGGTL
Trigger: GAGAGTTCCTCCATTTACCAAAATTTGACACGCACA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAATCTCTCAGGTTTGTTaGGTGGATCAACTGAAATGG +
Preference number: 3 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATISQVC*VDQLKW
Trigger: CCATTTCAGTTGATCCACCAAACAAACCTGAGAGAT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGCTGCTGCCTTTCATTaGACAGAAATGAGGTCACAG +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFAAAFH*TEMRSQ
Trigger: CTGTGACCTCATTTCTGTCAAATGAAAGGCAGCAGC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCATTCCGGTTTCCCAGTaGAGTGTTCTCACAGCATCA +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSIPVSQ*SVLTAS
Trigger: TGATGCTGTGAGAACACTCAACTGGGAAACCGGAAT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGAACTGCTTCTCACCTaGAGAAATCCCTCTTCTTCG +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSELLLT*RNPSSS
Trigger: CGAAGAAGAGGGATTTCTCAAGGTGAGAAGCAGTTC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTACTGCTCAGGGACTaGCTGATTTACTTTGCTGTC +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLLLRD*LIYFAV
Trigger: GACAGCAAAGTAAATCAGCAAGTCCCTGAGCAGTAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCCTTCTCTTGCTCCTTaGCTCATGGTGTTTACACTG +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFPSLAP*LMVFTL
Trigger: CAGTGTAAACACCATGAGCAAAGGAGCAAGAGAAGG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACCCAGGAGAAAGGGGTaGGGATCGGGATCTCTGAGT +
Preference number: 3 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGPRRKG*GSGSLS
Trigger: ACTCAGAGATCCCGATCCCAACCCCTTTCTCCTGGG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGCTCTGCTCTCTGCATaGCATCAAAGAAAGCAACAT +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSALLSA*HQRKQH
Trigger: ATGTTGCTTTCTTTGATGCAATGCAGAGAGCAGAGC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCCTGATCTCTCAGGTTaGTTTGGTGGATCAACTGAA +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFPDLSG*FGGSTE
Trigger: TTCAGTTGATCCACCAAACAAACCTGAGAGATCAGG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGGCTTTAACACTCTCTaGGTATGTGATCCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSGFNTL*VCDPSL
Trigger: GAGACTTGGATCACATACCAAGAGAGTGTTAAAGCC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAAGATGCTTGTTCCCTaGAACTGGCTCCTGAGTTTT +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSKMLVP*NWLLSF
Trigger: AAAACTCAGGAGCCAGTTCAAGGGAACAAGCATCTT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCTGCCCTATACAGTTTaGCCACTTGTCTTTGGTGAT +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLPYTV*PLVFGD
Trigger: ATCACCAAAGACAAGTGGCAAAACTGTATAGGGCAG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATGGCTCACTGTATTCTaGACCTCCAGGGCTCAATCG +
Preference number: 3 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKWLTVF*TSRAQS
Trigger: CGATTGAGCCCTGGAGGTCAAGAATACAGTGAGCCA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCTCTGCCTAATGGCCTaGTTTTCGCTTACTATAGAC +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLCLMA*FSLTID
Trigger: GTCTATAGTAAGCGAAAACAAGGCCATTAGGCAGAG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp AGTCAGACAGAGGAGGGTTCAAATGATGCTAGTGGGTaGCTTGAGCATGTTAACTTTTCCAGGGCTGTTTCC +
Preference number: 3 (lower is better)
Translates to: SQTEEGSNDASG*LEHVNFSRAVS
Trigger: GGAAACAGCCCTGGAAAAGTTAACATGCTCAAGTCACCCACTAGCATCATTTGAACCCTCCTCTGTCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp AGATATTTGGGAGCAGTAGACTCTTCCAAGAGCCCCTaGAACAGTTTCTCAAAGGTGATTCCGGTTTCCCAG +
Preference number: 3 (lower is better)
Translates to: RYLGAVDSSKSP*NSFSKVIPVSQ
Trigger: CTGGGAAACCGGAATCACCTTTGAGAAACTGTTTCAGGGGCTCTTGGAAGAGTCTACTGCTCCCAAATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp TGCCTTCTCTATGTAGTCTTGGATAGGTTGCTTCACTaGTGCAGGCCTCAGTCTTCCTCATCTGTACTGGAA +
Preference number: 3 (lower is better)
Translates to: CLLYVVLDRLLH*CRPQSSSSVLE
Trigger: TTCCAGTACAGATGAGGAAGACTGAGGCCTGCATCAGTGAAGCAACCTATCCAAGACTACATAGAGAAGGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp CGGACTAGTGTTTTGCATTTACTTCCAGCCACAGGATaGTACTTGATTCCCCAACTATGGCAGGTAATTGGG +
Preference number: 3 (lower is better)
Translates to: RTSVLHLLPATG*YLIPQLWQVIG
Trigger: CCCAATTACCTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGGCTGGAAGTAAATGCAAAACACTAGTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp ATCACACGTTCGGCATCTACTGTGTGTGCACGGCACTaGACTAAGGGTTTTACACCCATTCTCCATTTAATC +
Preference number: 3 (lower is better)
Translates to: ITRSASTVCARH*TKGFTPILHLI
Trigger: GATTAAATGGAGAATGGGTGTAAAACCCTTAGTGCAGTGCCGTGCACACACAGTAGATGCCGAACGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp AGTAAGCATGACATCAGAGTTGGCCGAGACAACTCTTaGATGCCAATCCTGATCTCTCAGGTTTGTTTGGTG +
Preference number: 3 (lower is better)
Translates to: SKHDIRVGRDNS*MPILISQVCLV
Trigger: CACCAAACAAACCTGAGAGATCAGGATTGGCATCCAAGAGTTGTCTCGGCCAACTCTGATGTCATGCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp CATAGGAAACTTTGCCTGTGCTGTCATCAGTGTCCATaGAGAACTGCTTCTCACCTTGAGAAATCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: HRKLCLCCHQCP*RTASHLEKSLF
Trigger: GAAGAGGGATTTCTCAAGGTGAGAAGCAGTTCTCCATGGACACTGATGACAGCACAGGCAAAGTTTCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp TCCTGGATTAGATTTGCCTGCCTAGCTCTGCCTGATTaGGATTACACATTGTGTAGTGCCAACATCACACGT +
Preference number: 3 (lower is better)
Translates to: SWIRFACLALPD*DYTLCSANITR
Trigger: ACGTGTGATGTTGGCACTACACAATGTGTAATCCCAATCAGGCAGAGCTAGGCAGGCAAATCTAATCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTCTGTTTGTCTTTCTaGAGCATACCTACTTGCTCT +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLCLSF*SIPTCS
Trigger: AGAGCAAGTAGGTATGCTCAAGAAAGACAAACAGAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGGCTTGACAGTCACTaGTCAGAAAAAGGAAGGTTA +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFRLDSH*SEKGRL
Trigger: TAACCTTCCTTTTTCTGACAAGTGACTGTCAAGCCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAAACACAATACTGTATaGCACTTTTGGCCACTTTTG +
Preference number: 3 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATKHNTV*HFWPLL
Trigger: CAAAAGTGGCCAAAAGTGCAATACAGTATTGTGTTT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTGGGGCATTTGTATTaGATCAGTCATCAAAGGTTA +
Preference number: 3 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLGHLY*ISHQRL
Trigger: TAACCTTTGATGACTGATCAAATACAAATGCCCCAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCAGAAACAGATGCATTaGAATCTGAAAGGAGACAGG +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSQKQMH*NLKGDR
Trigger: CCTGTCTCCTTTCAGATTCAAATGCATCTGTTTCTG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCCATCCAAACACAAATaGCTAAGATGCTTTCTGGCA +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFPSKHK*LRCFLA
Trigger: TGCCAGAAAGCATCTTAGCAATTTGTGTTTGGATGG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp TTAAGAGCACAGACCTTGGAGCCTACTGCCTGGATGTaGACTCCAGCTCTACCACTTACTTATTATGTGACT +
Preference number: 3 (lower is better)
Translates to: LRAQTLEPTAWM*TPALPLTYYVT
Trigger: AGTCACATAATAAGTAAGTGGTAGAGCTGGAGTTCACATCCAGGCAGTAGGCTCCAAGGTCTGTGCTCTTAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp CAGCTTGAACCTTGGTGGCTAATTGCGCTATTACTGTaGTTGATGAACACTATGCTGCAATCAGCTGGAAGC +
Preference number: 3 (lower is better)
Translates to: QLEPWWLIALLL*LMNTMLQSAGS
Trigger: GCTTCCAGCTGATTGCAGCATAGTGTTCATCAATCACAGTAATAGCGCAATTAGCCACCAAGGTTCAAGCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GACTGTAAGCCCTGTAGGCTTAACTATTCTGCCTTATaGCCTTCTGAAACCTCATCCTGTGGTCTGATGTCT +
Preference number: 3 (lower is better)
Translates to: DCKPCRLNYSAL*PSETSSCGLMS
Trigger: AGACATCAGACCACAGGATGAGGTTTCAGAAGGTCATAAGGCAGAATAGTTAAGCCTACAGGGCTTACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp TGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATaGGACCAGCCTGGTCCCCAGTTGAATAAATTAGAA +
Preference number: 3 (lower is better)
Translates to: CSYCYGTSPRLA*DQPGPQLNKLE
Trigger: TTCTAATTTATTCAACTGGGGACCAGGCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCATGCACGTAAAATGCTaGGAACAATGTCTAGTACAG +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSMHVKC*EQCLVQ
Trigger: CTGTACTAGACATTGTTCCAAGCATTTTACGTGCAT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGCCACAGGATGCTACTaGATTCCCCAACTATGGCAG +
Preference number: 3 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGATGCY*IPQLWQ
Trigger: CTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGGC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCATACAGTTTTGCCACTaGTCTTTGGTGATATCATCG +
Preference number: 3 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFIQFCH*SLVISS
Trigger: CGATGATATCACCAAAGACAAGTGGCAAAACTGTAT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGAATTTGAAACCAGCTaGGGCAACATAGCAAGACCG +
Preference number: 3 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKEFETS*GNIARP
Trigger: CGGTCTTGCTATGTTGCCCAAGCTGGTTTCAAATTC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp CTTGGAGCCATCTTTTCTATATATACTGAATCTTTCTaGTGGGCTTCTGGCCAGGAACTTCCGGTAGGAATT +
Preference number: 3 (lower is better)
Translates to: LGAIFSIYTESF*WASGQELPVGI
Trigger: AATTCCTACCGGAAGTTCCTGGCCAGAAGCCCAGCAGAAAGATTCAGTATATATAGAAAAGATGGCTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp CTGCAGTTTTTGCTAATTGTTCCTCCTGAGGAATTCTaGTCATACTGCTATGGTACATCTCCTAGGTTGGCA +
Preference number: 3 (lower is better)
Translates to: LQFLLIVPPEEF*SYCYGTSPRLA
Trigger: TGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCTCAGGAGGAACAATTAGCAAAAACTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp GGAGCCATCTTTTCTATATATACTGAATCTTTCTGCTaGGCTTCTGGCCAGGAACTTCCGGTAGGAATTACA +
Preference number: 3 (lower is better)
Translates to: GAIFSIYTESFC*ASGQELPVGIT
Trigger: TGTAATTCCTACCGGAAGTTCCTGGCCAGAAGCCCAGCAGAAAGATTCAGTATATATAGAAAAGATGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCATCTGTTTCTTGATCTaGCCTGTTTCTCTTTTTCTC +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSICFLI*PVSLFL
Trigger: GAGAAAAAGAGAAACAGGCAAGATCAAGAAACAGAT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATGGCCGAGACAACTCTaGGATGCCAATCCTGATCTC +
Preference number: 3 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIWPRQL*DANPDL
Trigger: GAGATCAGGATTGGCATCCAAGAGTTGTCTCGGCCA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATTTTCTCCAGTGGACTaGGAATCTGATGGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGFSPVD*ESDGPG
Trigger: TCCAGGGCCATCAGATTCCAAGTCCACTGGAGAAAA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAAGTGTCAGAGATTCTaGTTTCTCTTCCTCTTGTTA +
Preference number: 3 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSKCQRF*FLFLLL
Trigger: TAACAAGAGGAAGAGAAACAAGAATCTCTGACACTT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp CCAGGACAAGTTGCCACTAACACATATTACACAGCTTaGACCTTGGTGGCTAATTGCGCTATTACTGTGATT +
Preference number: 3 (lower is better)
Translates to: PGQVATNTYYTA*TLVANCAITVI
Trigger: AATCACAGTAATAGCGCAATTAGCCACCAAGGTTCAAGCTGTGTAATATGTGTTAGTGGCAACTTGTCCTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp ATCTTCTCTAAGCTCCTTTCCAGATCTGATAATCGATaGGTCTGTGACCATTCAGTACACTCTACTCCACTG +
Preference number: 3 (lower is better)
Translates to: IFSKLLSRSDNR*VCDHSVHSTPL
Trigger: CAGTGGAGTAGAGTGTACTGAATGGTCACAGACTCATCGATTATCAGATCTGGAAAGGAGCTTAGAGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp GGTCCAGCTTTTTATAAAAATCTTAGGGAAGGATTCTaGTGGGCCCTGCTTGATCACATGCTCCGTTTATTG +
Preference number: 3 (lower is better)
Translates to: GPAFYKNLREGF*WALLDHMLRLL
Trigger: CAATAAACGGAGCATGTGATCAAGCAGGGCCCATCAGAATCCTTCCCTAAGATTTTTATAAAAAGCTGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp AAACAAATGATAAGACTGCCCTGCCCTATACAGTTTTaGCACTTGTCTTTGGTGATATCATCGGAGCCATGT +
Preference number: 3 (lower is better)
Translates to: KQMIRLPCPIQF*HLSLVISSEPC
Trigger: ACATGGCTCCGATGATATCACCAAAGACAAGTGGCAAAACTGTATAGGGCAGGGCAGTCTTATCATTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGGGTTCAAGCAATTCTaGTGCTTCAGCCTCCCAAAT +
Preference number: 3 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGGFKQF*CFSLPN
Trigger: ATTTGGGAGGCTGAAGCACAAGAATTGCTTGAACCC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp TACAGTGTAAAAATCACACCCAGAACCACTGCCCTCTaGAGCAACTGTATTATACCCATGGTCAGAAAAGTT +
Preference number: 3 (lower is better)
Translates to: YSVKITPRTTAL*SNCIIPMVRKV
Trigger: AACTTTTCTGACCATGGGTATAATACAGTTGCTTCAGAGGGCAGTGGTTCTGGGTGTGATTTTTACACTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR GCA 72 bp TCCGGTTTCCCAGTTGAGTGTTCTCACAGCATCACGTaGCTTTCCTTTAGAGTACTTTGTAATTATATTTGG +
Preference number: 3 (lower is better)
Translates to: SGFPVECSHSIT*LSFRVLCNYIW
Trigger: CCAAATATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAACTGGGAAACCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACTTGAGCATACCTACTaGCTCTTTCATATAGCAGGA +
Preference number: 3 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGLEHTY*LFHIAG
Trigger: TCCTGCTATATGAAAGAGCAAGTAGGTATGCTCAAG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACTGATGGCCCTGGAATaGAATCCTAATGTGGCTTTA +
Preference number: 3 (lower is better)
Translates to: LSVLTASRAFPLEYFVIILMALE*NPNVAL
Trigger: TAAAGCCACATTAGGATTCAATTCCAGGGCCATCAG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAAAACGATTTCATCTTaGCCTGGATATTCAGTAGGA +
Preference number: 3 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKKTISS*PGYSVG
Trigger: TCCTACTGAATATCCAGGCAAAGATGAAATCGTTTT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGAGTCACGAATCACTTaGTATTTACAGATACACATG +
Preference number: 3 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKESRIT*YLQIHM
Trigger: CATGTGTATCTGTAAATACAAAGTGATTCGTGACTC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATTAGATCATAGGACCTaGCAGGCAGGGATCATTTTT +
Preference number: 3 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGLDHRT*QAGIIF
Trigger: AAAAATGATCCCTGCCTGCAAGGTCCTATGATCTAA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAATGCTAGTGGGTGACTaGAGCATGTTAACTTTTCCA +
Preference number: 3 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGMLVGD*SMLTFP
Trigger: TGGAAAAGTTAACATGCTCAAGTCACCCACTAGCAT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp CCACTGCTGCTCCTAGAAGTTAATAATGCTATAGACTaGGGAGACAATGAGTCACGAATCACTTTGTATTTA +
Preference number: 3 (lower is better)
Translates to: PLLLLEVNNAID*GDNESRITLYL
Trigger: TAAATACAAAGTGATTCGTGACTCATTGTCTCCTCAGTCTATAGCATTATTAACTTCTAGGAGCAGCAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAACCTCTTTGTACCTTaGTTTCCTCATCTTCAAATG +
Preference number: 3 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGNLFVP*FPHLQM
Trigger: CATTTGAAGATGAGGAAACAAAGGTACAAAGAGGTT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATACTGTATTGCACTTTaGGCCACTTTTGCGTCTTTA +
Preference number: 3 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIYCIAL*ATFASL
Trigger: TAAAGACGCAAAAGTGGCCAAAAGTGCAATACAGTA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp AAAAATGTTACTCCTGTGAGACAGAATGGACTAGAGTaGAGTAATTACGTAAGTAGGGAAATGTTAGGAACT +
Preference number: 3 (lower is better)
Translates to: KNVTPVRQNGLE*SNYVSREMLGT
Trigger: AGTTCCTAACATTTCCCTACTTACGTAATTACTCCACTCTAGTCCATTCTGTCTCACAGGAGTAACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CCA 72 bp ATTCCATCTATTGTGAAGATGCTTGTTCCCTTGAACTaGCTCCTGAGTTTTACAGAATTTGACAGTTTTAAA +
Preference number: 3 (lower is better)
Translates to: IPSIVKMLVPLN*LLSFTEFDSFK
Trigger: TTTAAAACTGTCAAATTCTGTAAAACTCAGGAGCCAGTTCAAGGGAACAAGCATCTTCACAATAGATGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR TCA 72 bp TTAACAAGCATCAAAACTTCTTCATCTCGAGTGTCTTaGTTCCTCCAAAGTAAATCCTTTGGATCACTATTA +
Preference number: 3 (lower is better)
Translates to: LTSIKTSSSRVS*FLQSKSFGSLL
Trigger: TAATAGTGATCCAAAGGATTTACTTTGGAGGAATCAAGACACTCGAGATGAAGAAGTTTTGATGCTTGTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGGTGTGGGGCCACAATaGGGGGAGGTCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKGVGPQ*GEVRKV
Trigger: CACCTTCCTGACCTCCCCTCATTGTGGCCCCACACC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGGGCCTTGCCTAGCATaGGCAGTTCTGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKGPCLA*AVLLQQ
Trigger: CTGCTGCAGCAGAACTGCTCATGCTAGGCAAGGCCC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGAAGCAGACTGGGTGTaGGGCCACAATGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKEADWV*GHNEGR
Trigger: CCTCCCCTCATTGTGGCCCCACACCCAGTCTGCTTC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCTGGGATTACAGGTGTaGGCCACAGCTGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLGLQV*ATAGWS
Trigger: GGACCATCCAGCTGTGGCTCACACCTGTAATCCCAG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAGAGACGCGTGTTCTTaGAGGAGCCCAGCATCGACG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKRDACS*RSPAST
Trigger: CGTCGATGCTGGGCTCCTCCAAGAACACGCGTCTCT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACAGGGAGAAGCAGACTaGGTGTGGGGCCACAATGAG +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATQGEAD*VWGHNE
Trigger: CTCATTGTGGCCCCACACCCAGTCTGCTTCTCCCTG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCTCCTCCCTTGGTCCTaGCTGGATTCTTCTACCCTG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLLPWS*LDSSTL
Trigger: CAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGACCTTGGAGCCTACTaGCTGGATGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKDLGAY*LDVNSS
Trigger: GCTGGAGTTCACATCCAGGCAGTAGGCTCCAAGGTC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCCCATCACAGCTCACTaGTCTGTTCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKPITAH*SVHPGP
Trigger: TGGGCCTGGATGAACAGAGCAGTGAGCTGTGATGGG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGGTGCTAACGAAGGCTaGGGTGAACGTGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATGANEG*GERVIS
Trigger: GCTGATGACACGTTCACCCCAGCCTTCGTTAGCACC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTGCCCAGCTCAGCCTaGCACACACGGGTCCATAAA +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLPSSA*HTRVHK
Trigger: TTTATGGACCCGTGTGTGCCAGGCTGAGCTGGGCAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTTACCATCTGTCACTaGAGCCATCGCGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATFTICH*SHRGLR
Trigger: TCGGAGTCCGCGATGGCTTCAGTGACAGATGGTAAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTGTCATACATCAGAATaGAGCCCATGGCCCCACGGT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKCHTSE*SPWPHG
Trigger: ACCGTGGGGCCATGGGCTTCATTCTGATGTATGACA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAACAGACATGAGCCACTaGGCCAAGCCCTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATTDMSH*AKPYFS
Trigger: GGAGAAATAGGGCTTGGCTCAGTGGCTCATGTCTGT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCTGGTCTGGAACTCCTaGCCTCAAATGATCCGCATG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLVWNS*PQMIRM
Trigger: CATGCGGATCATTTGAGGTCAGGAGTTCCAGACCAG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTTAAGAGATTGCCATTaGGGCTGGATGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLRDCH*GWMRWL
Trigger: GAGCCACCGCATCCAGCCTCAATGGCAATCTCTTAA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGCGAGAGACTCCTCCTaGCCGCTGACTTTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSARDSS*PLTFEV
Trigger: CACCTCAAAAGTCAGCGGGCAGGAGGAGTCTCTCGC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAGCCCAACAAGGTCATaGTACAGAGCTGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATSPTRS*YRAAHG
Trigger: GCCATGAGCAGCTCTGTAGCATGACCTTGTTGGGCT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACGGGGCGCTGCGGGATaGTCTGGTCCGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRGAAG*SGPVRS
Trigger: GGACCTGACCGGACCAGACCATCCCGCAGCGCCCCG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTGCTGCAGCAGCGGTaGGGTGTCCGAGAGACGCGT +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLLQQR*GVRETR
Trigger: ACGCGTCTCTCGGACACCCCACCGCTGCTGCAGCAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGGGACTGGGAAGCACTaGGCATTTTCTACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSGTGKH*AFSTQA
Trigger: GGCCTGGGTAGAAAATGCCCAGTGCTTCCCAGTCCC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCTCTGTCACCCAGGCTaGAGTGGCACAGTGTACAAT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLCHPG*SGTVYN
Trigger: ATTGTACACTGTGCCACTCCAGCCTGGGTGACAGAG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATGGCAGAGTTTGTCCTaGGAAAGATCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATWQSLS*ERSCPA
Trigger: AGCTGGGCAAGATCTTTCTCAGGACAAACTCTGCCA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTGGGGTTGTGGGGCTaGCAACAATGTGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLGLWG*QQCVPF
Trigger: GAAAGGAACACATTGTTGTCAGCCCCACAACCCCAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCTCAAGTGTTCCTCCTaGCTTGGCTTTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLKCSS*LGFPKC
Trigger: GCACTTTGGAAAGCCAAGGCAGGAGGAACACTTGAG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCACACCCAGAACCACTaGCCTCTGAAGCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKHTQNH*PLKQLY
Trigger: ATACAGTTGCTTCAGAGGGCAGTGGTTCTGGGTGTG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTCTGAGGGAAGCCTCTaGTGTTCAACCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSEGSL*CSTCSR
Trigger: CCTGGAGCAGGTTGAACAGCAGAGGCTTCCCTCAGA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGCTGGCCCTTCTCAGTaGGAACAACCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFAGPSQ*EQPSLP
Trigger: AGGAAGAGAGGGTTGTTCCCACTGAGAAGGGCCAGC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGCAACCTCCTCCTCCTaGGTTCAAGCAATTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKATSSS*VQAILV
Trigger: CACAAGAATTGCTTGAACCCAGGAGGAGGAGGTTGC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTTTCTGCTGGGCTTCTaGCCAGGAACTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFFLLGF*PGTSGR
Trigger: CCTACCGGAAGTTCCTGGCCAGAAGCCCAGCAGAAA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACTACAGAGCTGCTCATaGCATTTTCCTGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLQSCS*HFPGLS
Trigger: GGAGAGTCCAGGAAAATGCCATGAGCAGCTCTGTAG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAACTCCTCCTGCCCGCTaGCTTTTGAGGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKTPPAR*LLRWLR
Trigger: CCTCAGCCACCTCAAAAGTCAGCGGGCAGGAGGAGT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGAGTCCGGGTCTCCTaGTTCCAAGTCCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFRVRVS*FQVQSS
Trigger: AGAGCTTTGGACTTGGAATCAGGAGACCCGGACTCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCCAGGGCTGTTTCCTTaGCTGCCAAATTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKPGLFP*LPNWDN
Trigger: ATTATCCCAATTTGGCAGTCAAGGAAACAGCCCTGG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAATCAAAGGAAGAGGTaGTCAGCCAAGCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATNQRKR*SAKPPN
Trigger: GTTTGGAGGCTTGGCTGATCACCTCTTCCTTTGATT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTGCCTTATGACCTTCTaGAACCTCATCCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKCLMTF*NLILWS
Trigger: AGACCACAGGATGAGGTTTCAGAAGGTCATAAGGCA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCCTTGGAAAGGGCTCTaGGAGGGGTGTATTCGTTTC +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFPWKGL*EGCIRF
Trigger: GAAACGAATACACCCCTCTCAGAGCCCTTTCCAAGG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCCAGCATGTAGTGGCTaGTTCTTCTTGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKPACSG*FFLAAF
Trigger: AAAAGCAGCCAAGAAGAATCAGCCACTACATGCTGG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGGTCTGGTTGTCTGTTaGCCAGTAGACAAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFGLVVC*PVDKLA
Trigger: GGCAAGCTTGTCTACTGGGCAACAGACAACCAGACC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCTCACCTTATGTCTCTaGTGCCCTCTGCCTAATGGC +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLTLCL*CPLPNG
Trigger: GCCATTAGGCAGAGGGCAGCAGAGACATAAGGTGAG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCAATGCCCCTTCTCTTaGTCCTTTGCTCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKQCPFS*SFAHGV
Trigger: AACACCATGAGCAAAGGAGCAAGAGAAGGGGCATTG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGAGGCTCCTGCTGATTaGGAGCCTGATAAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSEAPAD*EPDKCC
Trigger: GCAACACTTATCAGGCTCCCAATCAGCAGGAGCCTC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGAGGCTGTTCAAAGTaGAGCATGGAGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFRGCSK*SMEAPA
Trigger: AGCAGGAGCCTCCATGCTCCACTTTGAACAGCCTCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCAAATGCCCCATTGCTaGAGCATAGAGGCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKQMPHC*SIEAVQ
Trigger: TTGAACAGCCTCTATGCTCCAGCAATGGGGCATTTG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGAATCCTTGGGAGCCTaGTACTACCAGAGGGTATAT +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATESLGA*YYQRVY
Trigger: ATATACCCTCTGGTAGTACCAGGCTCCCAAGGATTC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAGCCTCCCAAATAGCTaGGATTACAGATGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSLPNS*DYRCPP
Trigger: TGGCGGGCATCTGTAATCCCAGCTATTTGGGAGGCT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAAGCCAGACTCTGTGTaGACAGTGATCCCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATKPDSV*TVIPSH
Trigger: ATGACTAGGGATCACTGTCCACACAGAGTCTGGCTT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCCTAGACTCTCACAGTaGCTCCACCTTAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKPRLSQ*LHLKCP
Trigger: TGGACATTTAAGGTGGAGCCACTGTGAGAGTCTAGG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGAGTGTGTATTGAGGTaGAGGGAAGGAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKECVLR*REGAER
Trigger: TCTTTCAGCTCCTTCCCTCCACCTCAATACACACTC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAACAGGCGCAGGGCTTTaGGAGCCCAAGCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKTGAGL*EPKLDL
Trigger: CAAGTCAAGCTTGGGCTCTCAAAGCCCTGCGCCTGT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTGACTCGCCTTTCCTaGGCATTAGACATCCATCAC +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLTRLS*ALDIHH
Trigger: GTGATGGATGTCTAATGCTCAGGAAAGGCGAGTCAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAAACAAGGAGAGAGGTaGCAGCTGCTTATTACAGGA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKKQGER*QLLITG
Trigger: TCCTGTAATAAGCAGCTGTCACCTCTCTCCTTGTTT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTGATGGGCCCTGCTTaGTCACATGCTCCGTTTATT +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLMGPA*SHAPFI
Trigger: AATAAACGGAGCATGTGATCAAGCAGGGCCCATCAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGTCCAGTCAGTAGTTaGCTCTCAAGATGGCGGATG +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFSPVSS*LSRWRM
Trigger: CATCCGCCATCTTGAGAGTCAACTACTGACTGGACT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAATCGCGGACTCCGAGTaGGGGACGACGGGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIIADSE*GTTGSL
Trigger: GAGCGAACCCGTCGTCCCGCACTCGGAGTCCGCGAT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGAGCCTGATAAGTGTTaGCTGGCAGAGGCAGATACA +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFEPDKC*LAEADT
Trigger: TGTATCTGCCTCTGCCAGGCAACACTTATCAGGCTC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGATGATAAGACTGCCCTaGCCTATACAGTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKMIRLP*PIQFCH
Trigger: GTGGCAAAACTGTATAGGGCAGGGCAGTCTTATCAT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTATACTGAATCTTTCTaGTGGGCTTCTGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKYTESF*WASGQE
Trigger: TTCCTGGCCAGAAGCCCAGCAGAAAGATTCAGTATA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCACCTTATGTCTCTGCTaGCCTCTGCCTAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSTLCLC*PLPNGL
Trigger: AAGGCCATTAGGCAGAGGGCAGCAGAGACATAAGGT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACTTCTCTTGCTCCTTTaGTCATGGTGTTTACACTGG +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLLLLL*SWCLHW
Trigger: CCAGTGTAAACACCATGAGCAAAGGAGCAAGAGAAG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACCTCCTGAGGAATTCTaGTCATACTGCTATGGTACA +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATPPEEF*SYCYGT
Trigger: TGTACCATAGCAGTATGAGCAGAATTCCTCAGGAGG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACGCTGCGGGATGGTCTaGTCCGGTCAGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRCGMV*SGQVLT
Trigger: TGTGAGGACCTGACCGGACCAGACCATCCCGCAGCG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTTGATTCCCCAACTATaGCAGGTAATTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLIPQL*QVIGCR
Trigger: CCTACACCCAATTACCTGCCATAGTTGGGGAATCAA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCCTCCCATAAAGAGATaGCATCTATTTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSPPIKR*HLFPPP
Trigger: GGGAGGGGGAAATAGATGCCATCTCTTTATGGGAGG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTCATGGTGTTTACACTaGCTTTCTCCAGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKSWCLH*LSPVSG
Trigger: ACCAGAGACTGGAGAAAGCCAGTGTAAACACCATGA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp TTTGCCTGCCTAGCTCTGCCTGATTGGGATTACACATaGTGTAGTGCCAACATCACACGTTCGGCATCTACT +
Preference number: 4 (lower is better)
Translates to: FACLALPDWDYT*CSANITRSAST
Trigger: AGTAGATGCCGAACGTGTGATGTTGGCACTACACAATGTGTAATCCCAATCAGGCAGAGCTAGGCAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGGTCAGAGGCATCTTTaGCTCCAGTTTTACCATCTG +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSGQRHL*LQFYHL
Trigger: CAGATGGTAAAACTGGAGTCAAAGATGCCTCTGACC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTGTTCTCAAATAGTCTaGAGACGTCACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSCSQIV*RRHRAE
Trigger: CTCTGCCCTGTGACGTCTTCAGACTATTTGAGAACA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCTTGGATGCCAATCCTaGTCTCTCAGGTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLGCQS*SLRFVW
Trigger: CCAAACAAACCTGAGAGATCAGGATTGGCATCCAAG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGATGAGGACCTTGGTCTaGAATCCTAGTACTAGAGTA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKMRTLV*NPSTRV
Trigger: TACTCTAGTACTAGGATTTCAGACCAAGGTCCTCAT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAACATATTACACAGCTTaGACCTTGGTGGCTAATTGC +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATTYYTA*TLVANC
Trigger: GCAATTAGCCACCAAGGTTCAAGCTGTGTAATATGT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAGACTGAGGAGACAATaGGTCACGAATCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKRLRRQ*VTNHFV
Trigger: TACAAAGTGATTCGTGACTCATTGTCTCCTCAGTCT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTCTTCCAAGAGCCCCTaGAACAGTTTCTCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSSKSP*NSFSKV
Trigger: CACCTTTGAGAAACTGTTTCAGGGGCTCTTGGAAGA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCACTCTGTGTGGACAGTaGTCCCTAGTCATAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFTLCGQ*SLVIGN
Trigger: GTTTCCTATGACTAGGGATCACTGTCCACACAGAGT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTGCTCAGGGACTTGCTaGTTTACTTTGCTGTCTATT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKCSGTC*FTLLSI
Trigger: AATAGACAGCAAAGTAAATCAGCAAGTCCCTGAGCA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAAACCCAAGCTGCTCTaGAAGGAGCTGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKKPKLL*KELALL
Trigger: GAGAAGGGCCAGCTCCTTGCAGAGCAGCTTGGGTTT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCTTCCAGCCACAGGATaGTACTTGATTCCCCAACTA +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLPATG*YLIPQL
Trigger: TAGTTGGGGAATCAAGTAGCATCCTGTGGCTGGAAG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGACAGAGCTTGAAAAGTaGTTCTGTGTTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKTELEK*FCVGSC
Trigger: GCAAGATCCAACACAGAAGCACTTTTCAAGCTCTGT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTGGATTAGATTTGCCTaGCTAGCTCTGCCTGATTGG +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFWIRFA*LALPDW
Trigger: CCAATCAGGCAGAGCTAGGCAGGCAAATCTAATCCA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAAAGTGGAAAGTAACTaGCCCAGAGTCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATKVESN*PRVTVD
Trigger: ATCAACTGTGACTCTGGGCCAGTTACTTTCCACTTT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGCTTTAACACTCTCTTaGTATGTGATCCAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATALTLS*YVIQVS
Trigger: CGAGACTTGGATCACATACCAAGAGAGTGTTAAAGC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGGGAAAGCCAGCACTTaGGACTGGGAAGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGGKAST*DWEALG
Trigger: GCCCAGTGCTTCCCAGTCCCAAGTGCTGGCTTTCCC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCTTGTTCCCTTGAACTaGCTCCTGAGTTTTACAGAA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKLVPLN*LLSFTE
Trigger: TTCTGTAAAACTCAGGAGCCAGTTCAAGGGAACAAG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCACTCCTGCTACCATATaGACAAATCTGGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSTPATI*TNLGSL
Trigger: AAGGCTGCCCAGATTTGTCCATATGGTAGCAGGAGT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGGGTTCAAACAAGTTTaGGGGCAGAATCAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATGFKQV*GQNQEF
Trigger: AAACTCTTGATTCTGCCCCCAAACTTGTTTGAACCC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCACAGTGTACAATCATaGCTATGGCTCACTGTATTC +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKHSVQS*LWLTVF
Trigger: GAATACAGTGAGCCATAGCCATGATTGTACACTGTG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAGGTCTCTGGAATCCTaGTTTTCTGAATGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFRSLES*FSECRR
Trigger: CCTCCGACATTCAGAAAACCAGGATTCCAGAGACCT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTGGGATCGGGATCTCTaGGTTCAATTTTCTCAATTT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKWDRDL*VQFSQF
Trigger: AAATTGAGAAAATTGAACTCAGAGATCCCGATCCCA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGATTGCGCTATTACTGTaGTTGATGAACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKIALLL*LMNTML
Trigger: CAGCATAGTGTTCATCAATCACAGTAATAGCGCAAT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAATGATGCTAGTGGGTaGCTTGAGCATGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATNDASG*LEHVNF
Trigger: AAAGTTAACATGCTCAAGTCACCCACTAGCATCATT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACAGCCTTCTGGAGGATaGCACCACAGGGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGQPSGG*HHREKG
Trigger: GCCTTTCTCCCTGTGGTGTCATCCTCCAGAAGGCTG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAACATGCTCCGTTTATTaGCAGTCTTCACTAGAATCA +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATTCSVY*QSSLES
Trigger: TGATTCTAGTGAAGACTGTCAATAAACGGAGCATGT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTCACCCAGACTGGAATaGAGTGGCATAATTACAGCT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFSPRLE*SGIITA
Trigger: AGCTGTAATTATGCCACTGCATTCCAGTCTGGGTGA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGACCTTGGTGGCTAATTaGGCTATTACTGTGATTGAT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKTLVAN*AITVID
Trigger: ATCAATCACAGTAATAGCGCAATTAGCCACCAAGGT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATGCCCTATACAGTTTTaGCACTTGTCTTTGGTGATA +
Preference number: 4 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATCPIQF*HLSLVI
Trigger: TATCACCAAAGACAAGTGGCAAAACTGTATAGGGCA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTCTCTGCTGCCCTCTaGCTAATGGCCTTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKVSAAL*LMALFS
Trigger: CGAAAACAAGGCCATTAGGCAGAGGGCAGCAGAGAC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGGGGGAAGGAGGAAGTaGATGAGGTACCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKGGRRK*MRYLSV
Trigger: GACAGAAAGGTACCTCATGCACTTCCTCCTTCCCCC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGCATACAAACTCTCCTaGCTGCTCCTCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIAYKLS*LLLLGP
Trigger: GGGGCCCAGGAGGAGCAGGCAGGAGAGTTTGTATGC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGGGAGGTCAGGAAGGTaGGCCTTGCCTAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIGRSGR*ALPSMS
Trigger: GCTCATGCTAGGCAAGGCCCACCTTCCTGACCTCCC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTTGACAAAGATGGTGTaGAAAATGAGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLTKMV*KMSSCP
Trigger: GGGACAGGAGCTCATTTTCCACACCATCTTTGTCAA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGGCTTCCACCAGAAGTaGTTTCCCACACTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKGFHQK*FPTLSG
Trigger: ACCAGAGAGTGTGGGAAACCACTTCTGGTGGAAGCC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGGTGTGAGCCACAGCTaGATGGTCCTTTTATTTAGT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFGVSHS*MVLLFS
Trigger: ACTAAATAAAAGGACCATCCAGCTGTGGCTCACACC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCAGACTGGAATGCAGTaGCATAATTACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFQTGMQ*HNYSSL
Trigger: CAGTGAGCTGTAATTATGCCACTGCATTCCAGTCTG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATTCTACCCAGGCCCATaGGATCTGTTGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKFYPGP*DLLPQR
Trigger: TCTCTGAGGCAACAGATCCCATGGGCCTGGGTAGAA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTTCAAAGTGGAGCATaGAGGCTCCTGCTGATTGGG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKVQSGA*RLLLIG
Trigger: CCCAATCAGCAGGAGCCTCCATGCTCCACTTTGAAC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAACTCTAAGAATCCTTaGGAGCCTGGTACTACCAGA +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFNSKNP*EPGTTR
Trigger: TCTGGTAGTACCAGGCTCCCAAGGATTCTTAGAGTT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTTGGGGAGTCAGGTCTaGAGAATGGTCTTATTCTGT +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLGSQV*RMVLFC
Trigger: ACAGAATAAGACCATTCTCCAGACCTGACTCCCCAA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTGTCATCAGTGTCCATaGAGAACTGCTTCTCACCTT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFCHQCP*RTASHL
Trigger: AAGGTGAGAAGCAGTTCTCCATGGACACTGATGACA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTCATGGCATTTTCCTaGACTCTCCTCCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLMAFS*TLLPWS
Trigger: GGACCAAGGGAGGAGAGTCCAGGAAAATGCCATGAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTCTAAACTCTCATTCTaGGCTCATTCCTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSKLSF*AHSSLL
Trigger: CAGGAGTGAGGAATGAGCCCAGAATGAGAGTTTAGA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp CCTAGAATAGTCAGGCATGGACCATCCAAACACAAATaGCTAAGATGCTTTCTGGCAGCCTCAGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: PRIVRHGPSKHK*LRCFLAASETR
Trigger: CCTGGTTTCTGAGGCTGCCAGAAAGCATCTTAGCAATTTGTGTTTGGATGGTCCATGCCTGACTATTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp ATCTCCTACTTACACAATGCCCCTTCTCTTGCTCCTTaGCTCATGGTGTTTACACTGGCTTTCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ISYLHNAPSLAP*LMVFTLAFSSL
Trigger: GAGACTGGAGAAAGCCAGTGTAAACACCATGAGCAAAGGAGCAAGAGAAGGGGCATTGTGTAAGTAGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp CAAGCTCCATCTCCTACTTACACAATGCCCCTTCTCTaGCTCCTTTGCTCATGGTGTTTACACTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QAPSPTYTMPLL*LLCSWCLHWLS
Trigger: AGAAAGCCAGTGTAAACACCATGAGCAAAGGAGCAAGAGAAGGGGCATTGTGTAAGTAGGAGATGGAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCACCTGGGATTAGTCTaGGTAGTTGAGCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSHLGLV*VVEQFV
Trigger: AACAAATTGCTCAACTACTCAGACTAATCCCAGGTG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAAGCTATACGTTTCATaGAAGCAAGAACTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKKLYVS*KQELCL
Trigger: TAGACACAGTTCTTGCTTTCATGAAACGTATAGCTT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTCATCTCGAGTGTCTTaGTTCCTCCAAAGTAAATCC +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSSRVS*FLQSKS
Trigger: GGATTTACTTTGGAGGAATCAAGACACTCGAGATGA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACCTGGCTCCTTGATCTaGGGGAAGCCTCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIPGSLI*GKPLLF
Trigger: GAACAGCAGAGGCTTCCCTCAGATCAAGGAGCCAGG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTCTGCTCTCTGCATTaGATCAAAGAAAGCAACATC +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLCSLH*IKESNI
Trigger: GATGTTGCTTTCTTTGATGCAATGCAGAGAGCAGAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTCAGCTGGAAGCTGCTaGCTTTCATTTGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFSAGSC*LSFDRN
Trigger: ATTTCTGTCAAATGAAAGGCAGCAGCTTCCAGCTGA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTTCAAGCAATTCTTGTaGTTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSFKQFL*FSLPNS
Trigger: GCTATTTGGGAGGCTGAAGCACAAGAATTGCTTGAA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCACAAATTGCTAAGATaGTTTCTGGCAGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFHKLLR*FLAASE
Trigger: TTCTGAGGCTGCCAGAAAGCATCTTAGCAATTTGTG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAAACAAATGGGACTGTaGTCTATTCTCAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKKQMGL*SILNKC
Trigger: ACACTTGTTGAGAATAGAGCACAGTCCCATTTGTTT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAACCCTGCCATTTACTaGCTTCTCTATGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFNPAIY*LLYVVL
Trigger: CAAGACTACATAGAGAAGGCAGTAAATGGCAGGGTT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGAATTCTGCTCATACTaGTATGGTACATCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSEFCSY*YGTSPR
Trigger: CCTAGGAGATGTACCATAGCAGTATGAGCAGAATTC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATATTGTTCCTCTCTCTaGTCAGGCCTATCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKYCSSL*SGLSRG
Trigger: GCCTCTCGATAGGCCTGAGCAGAGAGAGGAACAATA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGGCCGAGACAACTCTTaGATGCCAATCCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKGRDNS*MPILIS
Trigger: AGAGATCAGGATTGGCATCCAAGAGTTGTCTCGGCC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGCCAGCACTTGGGACTaGGAAGCACTGGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGASTWD*EALGIF
Trigger: GAAAATGCCCAGTGCTTCCCAGTCCCAAGTGCTGGC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGTTTTCTGTGAAGACTaGGGTTCAAACAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSVFCED*GSNKFG
Trigger: CCCAAACTTGTTTGAACCCCAGTCTTCACAGAAAAC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGTACAATCATGGCTATaGCTCACTGTATTCTTGACC +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFVQSWL*LTVFLT
Trigger: GGTCAAGAATACAGTGAGCCATAGCCATGATTGTAC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTTCACTAGAATCACCTaGTTTGGGTTAGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFFTRIT*FGLGSS
Trigger: ACTACTCCCTAACCCAAACCAGGTGATTCTAGTGAA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGGGGTCACACAGCCTTaGCTCTTTTCACTGTACCCG +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGGVTQP*LFSLYP
Trigger: CGGGTACAGTGAAAAGAGCCAAGGCTGTGTGACCCC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp AGTGTTTTGCATTTACTTCCAGCCACAGGATGCTACTaGATTCCCCAACTATGGCAGGTAATTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SVLHLLPATGCY*IPQLWQVIGCR
Trigger: CCTACACCCAATTACCTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGGCTGGAAGTAAATGCAAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp TCACCTTATGTCTCTGCTGCCCTCTGCCTAATGGCCTaGTTTTCGCTTACTATAGACCAGAATTTACACAGG +
Preference number: 4 (lower is better)
Translates to: SPYVSAALCLMA*FSLTIDQNLHR
Trigger: CCTGTGTAAATTCTGGTCTATAGTAAGCGAAAACAAGGCCATTAGGCAGAGGGCAGCAGAGACATAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTATAGCAGGAACCTCTaGCATTTTGTAGGGGATAAT +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFYSRNL*HFVGDN
Trigger: ATTATCCCCTACAAAATGTCAGAGGTTCCTGCTATA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAATAATGCTATAGACTaGGGAGACAATGAGTCACGA +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSNNAID*GDNESR
Trigger: TCGTGACTCATTGTCTCCTCAGTCTATAGCATTATT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCACTTGTGTTCATCAGTaGGACATTGGCAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSTCVHQ*DIGKCD
Trigger: ATCACATTTGCCAATGTCTCACTGATGAACACAAGT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGGCTCACTGTATTCTTaGCCTCCAGGGCTCAATCGA +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGGSLYS*PPGLNR
Trigger: TCGATTGAGCCCTGGAGGTCAAGAATACAGTGAGCC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACTTAGGGAAGGATTCTaGTGGGCCCTGCTTGATCAC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGLREGF*WALLDH
Trigger: GTGATCAAGCAGGGCCCATCAGAATCCTTCCCTAAG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAGCCTTTCTGTGACATaGTTTTCTACCAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSLSVT*FSTKQS
Trigger: ACTTTGCTTGGTAGAAAATCATGTCACAGAAAGGCT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGTCAGCCTCATTAGGTaGAAATATGTTGGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFVSLIR*KYVGSR
Trigger: TCTTGAACCAACATATTTTCACCTAATGAGGCTGAC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGCAAATTGCATAAGGTaGCATCTCTCTGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKANCIR*HLSVWP
Trigger: TGGCCACACAGAGAGATGTCACCTTATGCAATTTGC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAATTACTGGGACCATCTaGAGAGAACCCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIITGTI*REPQGQ
Trigger: CTGCCCCTGGGGTTCTCTGCAGATGGTCCCAGTAAT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGTTCAAGCGATTCTCTaGCTCAGCCTCCTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGVQAIL*LSLLSR
Trigger: CCTACTCAGGAGGCTGAGGCAGAGAATCGCTTGAAC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTCATGCTACAGAGCTaGTCATGGCATTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKVMLQS*SWHFPG
Trigger: TCCAGGAAAATGCCATGAGCAGCTCTGTAGCATGAC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACCTGTAGAAACTATCTaGTCTAAGCTCCTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKPVETI*SKLLKP
Trigger: GGGCTTCAGGAGCTTAGACCAGATAGTTTCTACAGG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGTACATCTCCTAGGTTaGCATGAGACCAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGVHLLG*HETSLV
Trigger: GACCAGGCTGGTCTCATGCCAACCTAGGAGATGTAC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp GAAAAGTTAATCAAGTCACTCTTCACAAATGCCCCATaGCTGGAGCATAGAGGCTGTTCAAAGTGGAGCATG +
Preference number: 4 (lower is better)
Translates to: EKLIKSLFTNAP*LEHRGCSKWSM
Trigger: CATGCTCCACTTTGAACAGCCTCTATGCTCCAGCAATGGGGCATTTGTGAAGAGTGACTTGATTAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAGGCCTGCCTTACACTaGTGTTCTCCTTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIRPALH*CSPLHW
Trigger: CCAGTGCAAAGGAGAACATCAGTGTAAGGCAGGCCT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACAACTCATCTTGCTCTaGGTGTGGGCAGTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGQLILL*VWAVCN
Trigger: GTTACACACTGCCCACACTCAGAGCAAGATGAGTTG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACCACAGGATGCTACTTaGTTCCCCAACTATGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIPQDAT*FPNYGR
Trigger: CCTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGATGGAAACAGAGCTTaGAAAGTGCTTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKDGNRA*KVLLCW
Trigger: CCAACACAGAAGCACTTTTCAAGCTCTGTTTCCATC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATACCTTTCTGTCACATaGCTGGTGGCAGACCCTACT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGYLSVT*LVADPT
Trigger: AGTAGGGTCTGCCACCAGTCATGTGACAGAAAGGTA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGGAATCCTGGTTTTCTaGATGTCGGAGGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIGILVF*MSEGTS
Trigger: AGAGGTGCCCTCCGACATTCAGAAAACCAGGATTCC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAAATCAAACCCAAGCTaGTCTGCAAGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIKSNPS*SARSWP
Trigger: GGGCCAGCTCCTTGCAGAGCAGCTTGGGTTTGATTT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCACTTCTCAGTTAGACTaGTCAAGAGCAGTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSTSQLD*SRAVKR
Trigger: TCTTTTAACTGCTCTTGAGCAGTCTAACTGAGAAGT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGTTTTCTGGAATCACTaGCAGTTCCATGTCATTATT +
Preference number: 4 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSVFWNH*QFHVII
Trigger: AATAATGACATGGAACTGGCAGTGATTCCAGAAAAC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCAACACAATACTGTATTaGACTTTTGGCCACTTTTGC +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFNTILY*TFGHFC
Trigger: GCAAAAGTGGCCAAAAGTGCAATACAGTATTGTGTT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGGCTGTTTCCTTGACTaGCAAATTGGGATAATAATA +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFGCFLD*QIGIII
Trigger: TATTATTATCCCAATTTGGCAGTCAAGGAAACAGCC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACACGGACTAGTGTTTTaGATTTACTTCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKHGLVF*IYFQPQ
Trigger: CTGTGGCTGGAAGTAAATGCAAAACACTAGTCCGTG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGATTCTGATGGGCCCTaGTTGATCACATGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGDSDGP*LITCSV
Trigger: AACGGAGCATGTGATCAAGCAGGGCCCATCAGAATC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCTTGCTGATTTACTTTaGTGTCTATTAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLADLL*CLLAFL
Trigger: CAGAAAGGCTAATAGACAGCAAAGTAAATCAGCAAG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGCATGGATGGGAAAGTaGTTTGGGAACTGTAAAGTG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKAWMGK*FGNCKV
Trigger: CACTTTACAGTTCCCAAAGCACTTTCCCATCCATGC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTCACTTTACGCAATTaGCATGCCCCTGAAGAATGT +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLTLRN*HAPEEC
Trigger: ACATTCTTCAGGGGCATGCCAATTGCGTAAAGTGAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCATAAACATGGCTGCCTaGTGTCTCTTTTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFINMAA*CLFSNK
Trigger: TTTGTTTGAAAAGAGACACCAGGCAGCCATGTTTAT...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp AGACAACTCTTGGATGCCAATCCTGATCTCTCAGGTTaGTTTGGTGGATCAACTGAAATGGTGAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: RQLLDANPDLSG*FGGSTEMVKVK
Trigger: TTTCACCTTCACCATTTCAGTTGATCCACCAAACAAACCTGAGAGATCAGGATTGGCATCCAAGAGTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp TTTCTCCAGTGGACTTGGAATCTGATGGCCCTGGAATaGAATCCTAATGTGGCTTTAACACTCTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: FLQWTWNLMALE*NPNVALTLSWY
Trigger: ATACCAAGAGAGTGTTAAAGCCACATTAGGATTCAATTCCAGGGCCATCAGATTCCAAGTCCACTGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp AGCCAAGCCCTATTTCTCCATTTCTTAAAACTGGACTaGGCCATGGAACTTGTGTTCATCAGTGAGACATTG +
Preference number: 4 (lower is better)
Translates to: SQALFLHFLKLD*AMELVFISETL
Trigger: CAATGTCTCACTGATGAACACAAGTTCCATGGCCAAGTCCAGTTTTAAGAAATGGAGAAATAGGGCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp ATGATAAGACTGCCCTGCCCTATACAGTTTTGCCACTaGTCTTTGGTGATATCATCGGAGCCATGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: MIRLPCPIQFCH*SLVISSEPCFK
Trigger: CTTAAAACATGGCTCCGATGATATCACCAAAGACAAGTGGCAAAACTGTATAGGGCAGGGCAGTCTTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACAATTGGCATGCCCCTaGAGAATGTGTGCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIQLACP*RMCACQ
Trigger: TTGACACGCACACATTCTTCAGGGGCATGCCAATTG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGCCACTTGTCTTTGGTaGTATCATCGGAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGATCLW*YHRSHV
Trigger: AACATGGCTCCGATGATATCACCAAAGACAAGTGGC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTGAATCCTGTGAAATaGGAAGTCAGATTCATCCCT +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKVNPVK*EVRFIP
Trigger: AGGGATGAATCTGACTTCTCATTTCACAGGATTCAC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAGGATGAGTTTTCTGTaGAGACTGGGGTTCAAACAA +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKRMSFL*RLGFKQ
Trigger: TTGTTTGAACCCCAGTCTTCACAGAAAACTCATCCT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACTTGAGGCCAGAATTTaGAACCAGCTTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGLEARI*NQLGQH
Trigger: ATGTTGCCCAAGCTGGTTTCAAATTCTGGCCTCAAG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAAATTAAGTCCTCCTTaGGGTGGAATGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKKLSPP*GGMHFW
Trigger: CCAGAAATGCATTCCACCTCAAGGAGGACTTAATTT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATCACCCCCAGATAGGTaGAGTTCAGAATTAGGACTG +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGSPPDR*SSELGL
Trigger: CAGTCCTAATTCTGAACTTCACCTATCTGGGGGTGA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACAAAGCTCTGCTCTCTaGATTGCATCAAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKQSSAL*IASKKA
Trigger: TGCTTTCTTTGATGCAATGCAGAGAGCAGAGCTTTG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAGGAAACTTTGCCTGTaGTGTCATCAGTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRKLCL*CHQCPW
Trigger: CCATGGACACTGATGACAGCACAGGCAAAGTTTCCT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAATCAAGACTCAAAAGTaGAAAGTAACTGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKIKTQK*KVTGPE
Trigger: CTCTGGGCCAGTTACTTTCCACTTTTGAGTCTTGAT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAACACAGCTTGAACCTTaGTGGCTAATTGCGCTATTA +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKTQLEP*WLIALL
Trigger: TAATAGCGCAATTAGCCACCAAGGTTCAAGCTGTGT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGCAGGTGATATGAGTTaGGGAGTCAGGTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIAGDMS*GVRSGE
Trigger: TTCTCCAGACCTGACTCCCCAACTCATATCACCTGC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAACTGAATCTTTCTGCTaGGCTTCTGGCCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGTESFC*ASGQEL
Trigger: AAGTTCCTGGCCAGAAGCCCAGCAGAAAGATTCAGT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATTGCTCCTTTGCTCATaGTGTTTACACTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLLLCS*CLHWLS
Trigger: AGAAAGCCAGTGTAAACACCATGAGCAAAGGAGCAA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGTGGCTGATTCTTCTTaGCTGCTTTTAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGVADSS*LLLASR
Trigger: TCTGGAGGCTAAAAGCAGCCAAGAAGAATCAGCCAC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp GGAGGGAAGAAGAAGAAGAATTTCCAGGAGGCAGATTaGAGCTCGATACAAGGAAAACTTTCTATGAGAGTT +
Preference number: 4 (lower is better)
Translates to: GGKKKKNFQEAD*SSIQGKLSMRV
Trigger: AACTCTCATAGAAAGTTTTCCTTGTATCGAGCTCAAATCTGCCTCCTGGAAATTCTTCTTCTTCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTTTGGTGGATCAACTaGAATGGTGAAGGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKVWWIN*NGEGEK
Trigger: TTTTTCACCTTCACCATTTCAGTTGATCCACCAAAC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAATATCCAGGCGTCATaGGGACCTTGGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIINIQAS*GPWSEI
Trigger: GATTTCAGACCAAGGTCCTCATGACGCCTGGATATT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTTAAGTTTGAGACATaGAAATGTCCAGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKVKFET*KCPVGT
Trigger: AGTGCCTACTGGACATTTTCATGTCTCAAACTTAAC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTATTCGTTTCATTCTaGGACGAATACCATCTATCC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKVFVSF*DEYHLS
Trigger: GGATAGATGGTATTCGTCTCAGAATGAAACGAATAC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGCTAATTGTTCCTCCTaGGGAATTCTGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGANCSS*GILLIL
Trigger: CAGTATGAGCAGAATTCCTCAGGAGGAACAATTAGC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATATTTCATATGCCACTaGGAAGAGGTGTCAGTATAC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKYFICH*EEVSVY
Trigger: GTATACTGACACCTCTTCTCAGTGGCATATGAAATA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACAATCAGCTGGAAGCTaGTGCCTTTCATTTGACAGA +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGQSAGS*CLSFDR
Trigger: TCTGTCAAATGAAAGGCAGCAGCTTCCAGCTGATTG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAACATCTTTTCTCCAGTaGACTTGGAATCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGTSFLQ*TWNLMA
Trigger: GGCCATCAGATTCCAAGTCCACTGGAGAAAAGATGT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATATGCTGCAATCAGCTaGAAGCTGCTGCCTTTCATT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGYAAIS*KLLPFI
Trigger: AATGAAAGGCAGCAGCTTCCAGCTGATTGCAGCATA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAAAGTGCTTCTGTGTTaGATCTTGCCCTCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGKVLLC*ILPSLA
Trigger: AGCAAGAGAGGGCAAGATCCAACACAGAAGCACTTT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACGGATGTCACTGAGATaGCTGAGAAATAGGAACGGA +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIRMSLR*LRNRNG
Trigger: TCCGTTCCTATTTCTCAGCCATCTCAGTGACATCCG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATCATCAGGGCATGGATaGGAAAGTGCTTTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIISSGHG*ESALGT
Trigger: AGTTCCCAAAGCACTTTCCCATCCATGCCCTGATGA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGAGCCTCATTTGAAATaGAAAGAAAACTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGEPHLK*KENWRE
Trigger: CTCTCGCCAGTTTTCTTTTCATTTCAAATGAGGCTC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAATGGATTGTTTTTGTGTaGAGTAAACCTCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKWIVFV*SKPQCY
Trigger: GTAACACTGAGGTTTACTTCACACAAAAACAATCCA...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACCAAGTCCAAAGCTCTaGTCTCTGCATTGCATCAAA +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIPSPKL*SLHCIK
Trigger: TTTGATGCAATGCAGAGAGCAGAGCTTTGGACTTGG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAATCCTGTTTCCCCCTTaGAGATCTTACAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGILFPP*RSYRKQ
Trigger: CTGTTTTCTGTAAGATCTGCAAGGGGGAAACAGGAT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGCACATAAACATGGCTaGCTGGTGTCTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGAHKHG*LVSLFK
Trigger: TTTGAAAAGAGACACCAGGCAGCCATGTTTATGTGC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGAAAGTCTATATCAGTaGGATTTTCTGAATGACCCA +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKESLYQ*DFLNDP
Trigger: TGGGTCATTCAGAAAATCCCACTGATATAGACTTTC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACTAGCTCTGCCTGATTaGGATTACACATTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGLALPD*DYTLCS
Trigger: ACTACACAATGTGTAATCCCAATCAGGCAGAGCTAG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACCCTTACAAAGATCCTaGATTAGATTTGCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGPLQRS*IRFACL
Trigger: TAGGCAGGCAAATCTAATCCAGGATCTTTGTAAGGG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp TGTGATCCAAGTCTCGTAATCTCTCTGGATCATAGTTaGTCTATAAAAGATGCAGCCCAGAATGTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: CDPSLVISLDHS*SIKDAAQNVVK
Trigger: CTTAACCACATTCTGGGCTGCATCTTTTATAGACAAACTATGATCCAGAGAGATTACGAGACTTGGATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp CTCTTGATTCCATCTATTGTGAAGATGCTTGTTCCCTaGAACTGGCTCCTGAGTTTTACAGAATTTGACAGT +
Preference number: 4 (lower is better)
Translates to: LLIPSIVKMLVP*NWLLSFTEFDS
Trigger: ACTGTCAAATTCTGTAAAACTCAGGAGCCAGTTCAAGGGAACAAGCATCTTCACAATAGATGGAATCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp ATCTGTACTGGAAATAATAAAACCCACATCACAGTGTaGTGTCAAAGATCATCAGGGCATGGATGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ICTGNNKTHITV*CQRSSGHGWES
Trigger: ACTTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTATTATTTCCAGTACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATCTTCTTTTGTAAAGTaGTTCTGCACCCGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIISSFVK*FCTRVV
Trigger: CACTACACGGGTGCAGAATCACTTTACAAAAGAAGA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAAGCACGTTGTGCTTTaGGAAGTTGTCTTTAACAGG +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIKHVVL*EVVFNR
Trigger: CCTGTTAAAGACAACTTCTCAAAGCACAACGTGCTT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGAGAGAGGTGACAGCTaGTTATTACAGGAAATGATT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGERGDS*LLQEMI
Trigger: AATCATTTCCTGTAATAAGCAGCTGTCACCTCTCTC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAGAAGAAAGGTTTTCTaGAATCACTGCCAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRRKVF*NHCQFH
Trigger: ATGGAACTGGCAGTGATTCCAGAAAACCTTTCTTCT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGAGACAATATATTTTTaGTTGCAAGGGATAAGAACC +
Preference number: 4 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKETIYF*LQGIRT
Trigger: GGTTCTTATCCCTTGCAACCAAAAATATATTGTCTC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp CAGGTAGAGATATTCTTTCTCCTATCCTCAGTCTTCTaGGGGCATTTGTATTTGATCAGTCATCAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: QVEIFFLLSSVF*GHLYLISHQRL
Trigger: TAACCTTTGATGACTGATCAAATACAAATGCCCCAAGAAGACTGAGGATAGGAGAAAGAATATCTCTACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR TCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACTTTTCTATATATACTaGATCTTTCTGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGLFYIY*IFLLGF
Trigger: GAAGCCCAGCAGAAAGATTCAGTATATATAGAAAAG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAATATTTGAATCACGGTaGATACAAACTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIIFESR*IQTLLP
Trigger: AGGCAGGAGAGTTTGTATGCACCGTGATTCAAATAT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACAGTTAAGAACCAACTaGAAAGCAGCAAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGQLRTN*KAAKSE
Trigger: TTCTGATTTTGCTGCTTTCCAGTTGGTTCTTAACTG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATTTCCTTCCATTCTTTaGATGTCAACCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIFPSIL*MSTFPS
Trigger: AGAAGGGAAGGTTGACATCCAAAGAATGGAAGGAAA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATATTTGCCACTCAAATaGAAAAAGAATAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGYLPLK*KKNRSS
Trigger: GCTGGACCTATTCTTTTTCCATTTGAGTGGCAAATA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGATGTCTACAGGGGTTaGAAGATAGTTTACTACATG +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIDVYRG*KIVYYM
Trigger: CATGTAGTAAACTATCTTCCAACCCCTGTAGACATC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp TTTCTCCTATCCTCAGTCTTCTTGGGGCATTTGTATTaGATCAGTCATCAAAGGTTAGTACTAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: FLLSSVFLGHLY*ISHQRLVLKGE
Trigger: TTCACCTTTTAGTACTAACCTTTGATGACTGATCAAATACAAATGCCCCAAGAAGACTGAGGATAGGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp TCAAACAAGTTTGGGGGCAGAATCAAGAGTTTCAATTaGGACATGTTAAGTTTGAGACATGAAAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: SNKFGGRIKSFN*DMLSLRHENVQ
Trigger: CTGGACATTTTCATGTCTCAAACTTAACATGTCCAAATTGAAACTCTTGATTCTGCCCCCAAACTTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR GCA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGAAACAAGCACGTTGTaGTTTGAGAAGTTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIETSTL*FEKLSL
Trigger: TAAAGACAACTTCTCAAAGCACAACGTGCTTGTTTC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp TCATTTAACAGTATTTATATCTCACGGACTAGTGTTTaGCATTTACTTCCAGCCACAGGATGCTACTTGATT +
Preference number: 4 (lower is better)
Translates to: SFNSIYISRTSV*HLLPATGCYLI
Trigger: AATCAAGTAGCATCCTGTGGCTGGAAGTAAATGCAAAACACTAGTCCGTGAGATATAAATACTGTTAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
3UTR CAA 72 bp GCTATACGTTTCATGAAAGCAAGAACTGTGTCTAATTaGCCACTACTTGTATCCTGGCACATAATATATATT +
Preference number: 4 (lower is better)
Translates to: AIRFMKARTVSN*PLLVSWHIIYI
Trigger: AATATATATTATGTGCCAGGATACAAGTAGTGGCAAATTAGACACAGTTCTTGCTTTCATGAAACGTATAGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS CCA 90 bp GAAGCAGACTGGGTGTGGGGCCACAATGAGGGGAGGTCAGGAAGGTaGGCCTTGCCTAGCATGAGCAGTTCTGCTGCAGCAGCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: EADWVWGHNEGRSGR*ALPSMSSSAAAAVG
Trigger: CCCCACCGCTGCTGCAGCAGAACTGCTCATGCTAGGCAAGGCCCACCTTCCTGACCTCCCCTCATTGTGGCCCCACACCCAGTCTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS CCA 90 bp AGTTCTGCTGCAGCAGCGGTGGGGTGTCCGAGAGACGCGTGTTCTTaGAGGAGCCCAGCATCGACGGGTCTGTGTCCAGCGAATCAGACA +
Preference number: 5 (lower is better)
Translates to: SSAAAAVGCPRDACS*RSPASTGLCPANQT
Trigger: TGTCTGATTCGCTGGACACAGACCCGTCGATGCTGGGCTCCTCCAAGAACACGCGTCTCTCGGACACCCCACCGCTGCTGCAGCAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGAGAGACGCGTGTTCTaGGAGGAGCCCAGCATCGAC +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATERRVF*EEPSID
Trigger: GTCGATGCTGGGCTCCTCCAAGAACACGCGTCTCTC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGGGGGTCACACAGCCTaGGCTCTTTTCACTGTACCC +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATGGHTA*ALFTVP
Trigger: GGGTACAGTGAAAAGAGCCAAGGCTGTGTGACCCCC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAGAAGGAGGGGATCCTaGGAAAGGGCTCTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATRRRGS*ERALRG
Trigger: CCCTCTCAGAGCCCTTTCCAAGGATCCCCTCCTTCT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAGGTCTGGTTGTCTGTaGCCCAGTAGACAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATRSGCL*PSRQAC
Trigger: GCAAGCTTGTCTACTGGGCAACAGACAACCAGACCT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTTTCTCCAGTGGACTaGGAATCTGATGGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATFSPVD*ESDGPG
Trigger: TCCAGGGCCATCAGATTCCAAGTCCACTGGAGAAAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACAGTCTTGGACAGCATaGAAGGACTCTTCATTGGTG +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATQSWTA*KDSSLV
Trigger: CACCAATGAAGAGTCCTTCAATGCTGTCCAAGACTG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCTGAGTAGCCCAGTCTaGGACAGCATTGAAGGACTC +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLSSPV*DSIEGL
Trigger: GAGTCCTTCAATGCTGTCCAAGACTGGGCTACTCAG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTGGCCGAGACAACTCTaGGATGCCAATCCTGATCTC +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFWPRQL*DANPDL
Trigger: GAGATCAGGATTGGCATCCAAGAGTTGTCTCGGCCA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTTAAGAGCACAGACCTaGGAGCCTACTGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLRAQT*EPTAWM
Trigger: CATCCAGGCAGTAGGCTCCAAGGTCTGTGCTCTTAA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGCTGCTGCCTTTCATTaGACAGAAATGAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATAAAFH*TEMRSQ
Trigger: CTGTGACCTCATTTCTGTCAAATGAAAGGCAGCAGC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACTACTGCTCAGGGACTaGCTGATTTACTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLLLRD*LIYFAV
Trigger: GACAGCAAAGTAAATCAGCAAGTCCCTGAGCAGTAG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGTGGTCAGAGGCATCTTaGACTCCAGTTTTACCATCT +
Preference number: 5 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKWSEAS*TPVLPS
Trigger: AGATGGTAAAACTGGAGTCAAAGATGCCTCTGACCA...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGCTCTGCTCTCTGCATaGCATCAAAGAAAGCAACAT +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATALLSA*HQRKQH
Trigger: ATGTTGCTTTCTTTGATGCAATGCAGAGAGCAGAGC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACCTGATCTCTCAGGTTaGTTTGGTGGATCAACTGAA +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATPDLSG*FGGSTE
Trigger: TTCAGTTGATCCACCAAACAAACCTGAGAGATCAGG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCAGCATGACATCAGAGTaGGCCGAGACAACTCTTGGA +
Preference number: 5 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSMTSE*AETTLG
Trigger: TCCAAGAGTTGTCTCGGCCAACTCTGATGTCATGCT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTTCACAAATGCCCCATaGCTGGAGCATAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFFTNAP*LEHRGC
Trigger: ACAGCCTCTATGCTCCAGCAATGGGGCATTTGTGAA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTTTAAGAGATTGCCATaGAGGCTGGATGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSFKRLP*RLDAVA
Trigger: AGCCACCGCATCCAGCCTCAATGGCAATCTCTTAAA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCCGTCTTGCCAAGGTTaGGATTGTTTTTGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKPSCQG*DCFCVK
Trigger: CTTCACACAAAAACAATCCAAACCTTGGCAAGACGG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTCTGATGGGCCCTGCTaGATCACATGCTCCGTTTAT +
Preference number: 5 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSSDGPC*ITCSVY
Trigger: ATAAACGGAGCATGTGATCAAGCAGGGCCCATCAGA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCACAATGCCCCTTCTCTaGCTCCTTTGCTCATGGTGT +
Preference number: 5 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSTMPLL*LLCSWC
Trigger: ACACCATGAGCAAAGGAGCAAGAGAAGGGGCATTGT...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACACAGCCTGGTCCCCAGTaGAATAAATTAGAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATQPGPQ*NKLERA
Trigger: TGCTCTTTCTAATTTATTCAACTGGGGACCAGGCTG...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAGGGAAAGCCAGCACTaGGGACTGGGAAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRESQH*GLGSTG
Trigger: CCCAGTGCTTCCCAGTCCCAAGTGCTGGCTTTCCCT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGATGCTAGTGGGTGACTaGAGCATGTTAACTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKMLVGD*SMLTFP
Trigger: TGGAAAAGTTAACATGCTCAAGTCACCCACTAGCAT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGCCTTCCCCTAAACTGTaGGCAAACAAAGTCAAACAA +
Preference number: 5 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKPSPKL*ANKVKQ
Trigger: TTGTTTGACTTTGTTTGCCAACAGTTTAGGGGAAGG...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGAATTTGAAACCAGCTaGGGCAACATAGCAAGACCG +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFEFETS*GNIARP
Trigger: CGGTCTTGCTATGTTGCCCAAGCTGGTTTCAAATTC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGAATCCTGTTTCCCCCTaGCAGATCTTACAGAAAACA +
Preference number: 5 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKNPVSP*QILQKT
Trigger: TGTTTTCTGTAAGATCTGCAAGGGGGAAACAGGATT...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCCTTGGGAGCCTGGTACTACCAGAGGGTATATCCCATCTACCCTTCTGCTAAGGATTGGGATTACACATaGTGTAGTGCCAACATCACA +
Preference number: 5 (lower is better)
Translates to: SLGAWYYQRVYPIYPSAKDWDYT*CSANIT
Trigger: TGTGATGTTGGCACTACACAATGTGTAATCCCAATC...CTTAGCAGAAGGGTAGATGGGATATACCCTCTGGTAGTACCAGGCTCCCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCGGATGGGAAAGTGCTTaGGGAACTGTAAAGTGCCTA +
Preference number: 5 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSGWESA*GTVKCL
Trigger: TAGGCACTTTACAGTTCCCAAAGCACTTTCCCATCC...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCCAGCTAGAACCTCTTaGTACCTTTGTTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSPARTS*YLCFLI
Trigger: GATGAGGAAACAAAGGTACAAAGAGGTTCTAGCTGG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGCCACAGGATGCTACTaGATTCCCCAACTATGGCAG +
Preference number: 5 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKATGCY*IPQLWQ
Trigger: CTGCCATAGTTGGGGAATCAAGTAGCATCCTGTGGC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTTTTGCCACTTGTCTTaGGTGATATCATCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFFCHLS*VISSEP
Trigger: TGGCTCCGATGATATCACCAAAGACAAGTGGCAAAA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAATACAGTTTTGCCACTaGTCTTTGGTGATATCATCG +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATIQFCH*SLVISS
Trigger: CGATGATATCACCAAAGACAAGTGGCAAAACTGTAT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCTGTGCGTGTCAAATTTaGGTAAATGGAGGAACTCTC +
Preference number: 5 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSCACQI*VNGGTL
Trigger: GAGAGTTCCTCCATTTACCAAAATTTGACACGCACA...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp AGGAATTCTGCTCATACTGCTATGGTACATCTCCTAGGTTGGCATGAGACCAGCCTTGAGCATACCTACTaGCTCTTTCATATAGCAGGA +
Preference number: 5 (lower is better)
Translates to: RNSAHTAMVHLLGWHETSLEHTY*LFHIAG
Trigger: TCCTGCTATATGAAAGAGCAAGTAGGTATGCTCAAG...GCTGGTCTCATGCCAACCTAGGAGATGTACCATAGCAGTATGAGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAATCTGTTTCTTGATCTaGCCTGTTTCTCTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATICFLI*PVSLFL
Trigger: GAGAAAAAGAGAAACAGGCAAGATCAAGAAACAGAT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAAACCTCTTTGTACCTTaGTTTCCTCATCTTCAAATG +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATNLFVP*FPHLQM
Trigger: CATTTGAAGATGAGGAAACAAAGGTACAAAGAGGTT...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACAGAGTCACGAATCACTTaGTATTTACAGATACACATG +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATESRIT*YLQIHM
Trigger: CATGTGTATCTGTAAATACAAAGTGATTCGTGACTC...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAGGATCTTGCCCTCTCTaGCTTCGAGGAAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGGSCPL*LRGNSC
Trigger: GCAGGAGTTTCCTCGAAGCAAGAGAGGGCAAGATCC...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCCAGAAACAGATGCATTaGAATCTGAAAGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFQKQMH*NLKGDR
Trigger: CCTGTCTCCTTTCAGATTCAAATGCATCTGTTTCTG...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp CACATGACTGGTGGCAGACCCTACTTTAACCCAGCCCAACAAGGTCATGCTACATTAGTAATGAAAGGATaGCTGCCAAAATCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: HMTGGRPYFNPAQQGHATLVMKG*LPKSCF
Trigger: GAAACAGGATTTTGGCAGCAATCCTTTCATTACTAA...TGTAGCATGACCTTGTTGGGCTGGGTTAAAGTAGGGTCTGCCACCAGTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAGTCCTGAGAAAGATCTaGCCCAGCTCAGCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIVLRKI*PSSAWH
Trigger: GTGCCAGGCTGAGCTGGGCAAGATCTTTCTCAGGAC...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAGCGAATCAGACATCTaGTCACAAATGGCATCCACC +
Preference number: 5 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKSESDI*SQMAST
Trigger: GGTGGATGCCATTTGTGACAAGATGTCTGATTCGCT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATCAGGAAGGTGGGCCTaGCCTAGCATGAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIISGRWA*PSMSSS
Trigger: AGAACTGCTCATGCTAGGCAAGGCCCACCTTCCTGA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCGTCTTCTTGGGGCATTaGTATTTGATCAGTCATCAA +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFVFLGH*YLISHQ
Trigger: TTGATGACTGATCAAATACAAATGCCCCAAGAAGAC...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATGCGATTTAGGCTCATaGCAACCTCCTCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIICDLGS*QPPPPG
Trigger: CCCAGGAGGAGGAGGTTGCAATGAGCCTAAATCGCA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAGTGGAGTTAGCTGTTTaGTCTACCTGCTGGATACCT +
Preference number: 5 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKVELAV*STCWIP
Trigger: AGGTATCCAGCAGGTAGACAAAACAGCTAACTCCAC...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTGATGGCCCTGGAATaGAATCCTAATGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLMALE*NPNVAL
Trigger: TAAAGCCACATTAGGATTCAATTCCAGGGCCATCAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTTGGGGCATTTGTATTaGATCAGTCATCAAAGGTTA +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLGHLY*ISHQRL
Trigger: TAACCTTTGATGACTGATCAAATACAAATGCCCCAA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TCTCCTCCCTTGGTCCTGACTGGATTCTTCTACCCTGATCCACTTAGTAAGTTCTTGCCAAGGTTTGGATaGTTTTTGTGTGAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: SPPLVLTGFFYPDPLSKFLPRFG*FLCEVN
Trigger: GTTTACTTCACACAAAAACAATCCAAACCTTGGCAA...GAACTTACTAAGTGGATCAGGGTAGAAGAATCCAGTCAGGACCAAGGGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACTCTGTTTGTCTTTCTaGAGCATACCTACTTGCTCT +
Preference number: 5 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKLCLSF*SIPTCS
Trigger: AGAGCAAGTAGGTATGCTCAAGAAAGACAAACAGAG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAGGCAAGAGGATCGCTaGAGGCCAGAATTTGAAACC +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIRQEDR*RPEFET
Trigger: GGTTTCAAATTCTGGCCTCAAGCGATCCTCTTGCCT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAACACATGCTCCGTTTATaGACAGTCTTCACTAGAATC +
Preference number: 5 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKHMLRL*TVFTRI
Trigger: GATTCTAGTGAAGACTGTCAATAAACGGAGCATGTG...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATCACGGACTAGTGTTTaGCATTTACTTCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGSRTSV*HLLPAT
Trigger: TGTGGCTGGAAGTAAATGCAAAACACTAGTCCGTGA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAATTCCGGTTTCCCAGTaGAGTGTTCTCACAGCATCA +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIIPVSQ*SVLTAS
Trigger: TGATGCTGTGAGAACACTCAACTGGGAAACCGGAAT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACCTTCTCTTGCTCCTTaGCTCATGGTGTTTACACTG +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIPSLAP*LMVFTL
Trigger: CAGTGTAAACACCATGAGCAAAGGAGCAAGAGAAGG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGAAGGCTTGACAGTCACTaGTCAGAAAAAGGAAGGTTA +
Preference number: 5 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGRLDSH*SEKGRL
Trigger: TAACCTTCCTTTTTCTGACAAGTGACTGTCAAGCCT...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAAGATGCTTGTTCCCTaGAACTGGCTCCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIKMLVP*NWLLSF
Trigger: AAAACTCAGGAGCCAGTTCAAGGGAACAAGCATCTT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACTATCCTCAGTCTTCTaGGGGCATTTGTATTTGATC +
Preference number: 5 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGLSSVF*GHLYLI
Trigger: GATCAAATACAAATGCCCCAAGAAGACTGAGGATAG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACTGCCCTATACAGTTTaGCCACTTGTCTTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIILPYTV*PLVFGD
Trigger: ATCACCAAAGACAAGTGGCAAAACTGTATAGGGCAG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp ATAAAACCCACATCACAGTGTTGTGTCAAAGATCATCAGGGCATGGATGGGAAAAGGTTTGGATTGTTTTaGTGTGAAGTAAACCTCAGT +
Preference number: 5 (lower is better)
Translates to: IKPTSQCCVKDHQGMDGKRFGLF*CEVNLS
Trigger: ACTGAGGTTTACTTCACACAAAAACAATCCAAACCT...TTTCCCATCCATGCCCTGATGATCTTTGACACAACACTGTGATGTGGGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATACTCTGCCTAATGGCCTaGTTTTCGCTTACTATAGAC +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIILCLMA*FSLTID
Trigger: GTCTATAGTAAGCGAAAACAAGGCCATTAGGCAGAG...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGACCATCCAAACACAAATaGCTAAGATGCTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGPSKHK*LRCFLA
Trigger: TGCCAGAAAGCATCTTAGCAATTTGTGTTTGGATGG...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAGGCAACTGCAGTTTTaGCTAATTGTTCCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIRQLQF*LIVPPE
Trigger: CTCAGGAGGAACAATTAGCAAAAACTGCAGTTGCCT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp GACAGCTGCTTATTACAGGAAATGATTTACCAGAGATCCTATAGCAAGTTAGGATACTGTATTGCACTTTaGGCCACTTTTGCGTCTTTA +
Preference number: 5 (lower is better)
Translates to: DSCLLQEMIYQRSYSKLGYCIAL*ATFASL
Trigger: TAAAGACGCAAAAGTGGCCAAAAGTGCAATACAGTA...TCCTAACTTGCTATAGGATCTCTGGTAAATCATTTCCTGTAATAAGCAGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAATGCACGTAAAATGCTaGGAACAATGTCTAGTACAG +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIMHVKC*EQCLVQ
Trigger: CTGTACTAGACATTGTTCCAAGCATTTTACGTGCAT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATATTCATCAGTGAGACATaGGCAAATGTGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIFISET*ANVMET
Trigger: TGTTTCCATCACATTTGCCAATGTCTCACTGATGAA...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAAAACGATTTCATCTTaGCCTGGATATTCAGTAGGA +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIKTISS*PGYSVG
Trigger: TCCTACTGAATATCCAGGCAAAGATGAAATCGTTTT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS-3UTR CAA 90 bp TTGAGTGTTCTCACAGCATCACGTGCCTTTCCTTTAGAGTACTTTGTAATTATAAAGTGTCAGAGATTCTaGTTTCTCTTCCTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: LSVLTASRAFPLEYFVIIKCQRF*FLFLLL
Trigger: TAACAAGAGGAAGAGAAACAAGAATCTCTGACACTT...TATAATTACAAAGTACTCTAAAGGAAAGGCACGTGATGCTGTGAGAACACTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS GCA 72 bp TTACCATCTGTCACTGAAGCCATCGCGGACTCCGAGTaGGGGACGACGGGTTCGCTCCCGGACGGTCGGCGG +
Preference number: 6 (lower is better)
Translates to: LPSVTEAIADSE*GTTGSLPDGRR
Trigger: CCGCCGACCGTCCGGGAGCGAACCCGTCGTCCCGCACTCGGAGTCCGCGATGGCTTCAGTGACAGATGGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS CCA 72 bp GCAGCAGCGGTGGGGTGTCCGAGAGACGCGTGTTCTTaGAGGAGCCCAGCATCGACGGGTCTGTGTCCAGCG +
Preference number: 6 (lower is better)
Translates to: AAAVGCPRDACS*RSPASTGLCPA
Trigger: CGCTGGACACAGACCCGTCGATGCTGGGCTCCTCCAAGAACACGCGTCTCTCGGACACCCCACCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS CAA 72 bp TGCAGCAGCGGTGGGGTGTCCGAGAGACGCGTGTTCTaGGAGGAGCCCAGCATCGACGGGTCTGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: CSSGGVSERRVF*EEPSIDGSVSS
Trigger: GCTGGACACAGACCCGTCGATGCTGGGCTCCTCCAAGAACACGCGTCTCTCGGACACCCCACCGCTGCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4
CDS CAA 90 bp CAGTTCTGCTGCAGCAGCGGTGGGGTGTCCGAGAGACGCGTGTTCTaGGAGGAGCCCAGCATCGACGGGTCTGTGTCCAGCGAATCAGAC +
Preference number: 6 (lower is better)
Translates to: QFCCSSGGVSERRVF*EEPSIDGSVSSESD
Trigger: GTCTGATTCGCTGGACACAGACCCGTCGATGCTGGGCTCCTCCAAGAACACGCGTCTCTCGGACACCCCACCGCTGCTGCAGCAGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371655.4