Pregenerated sensors for RAB39A (Homo sapiens)
Ensembl gene IDs: ENSG00000179331Ensembl transcript IDs: ENST00000320578.3
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTCCTAGTCGATACTTCTGAGATTGTTTACTCTGCAGGTGAACAGTGCATATTTGTATTTATCCTGAACTaGCACCCAATCTGTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VLVDTSEIVYSAGEQCIFVFILN*HPICSC Trigger: ACAGGAACAGATTGGGTGTCAGTTCAGGATAAATAC...AAATATGCACTGTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CCA 90 bp | GTCCTAGTCGATACTTCTGAGATTGTTTACTCTGCAGGTGAACAGTGCATATTTAGTCCACGCCGACGGTaGGGTCGCAGGCGGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VLVDTSEIVYSAGEQCIFSPRRR*GRRRGS Trigger: GCTCCCCCGCCTGCGACCCCACCGTCGGCGTGGACT...AAATATGCACTGTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR GCA 90 bp | TCTGCTGTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTATCTCCATCGCTCACGTaGCCCGCTGGCTCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SAVNVGIYPELTPNLFLLSPSLT*PAGSRA Trigger: GGCCCGGGAGCCAGCGGGGCACGTGAGCGATGGAGA...TAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAACAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CCA 90 bp | AATACCCAATCTAGTAGTGTAACAAGTAAGCATCATGCTCTGAATCAAATACCTCCGGGGAAGCGGCCCTaGGTGAAGCGGTGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NTQSSSVTSKHHALNQIPPGKRP*VKRCRR Trigger: CCTCCTGCACCGCTTCACCCAGGGCCGCTTCCCCGG...AGGTATTTGATTCAGAGCATGATGCTTACTTGTTACACTACTAGATTGGGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | GTCCTAGTCGATACTTCTGAGATTGTTTACTCTGCAGGTGAACAGTGCATATTTCCCAGAGCTGTAGCTTaGTCCTCTTGCCCGGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: VLVDTSEIVYSAGEQCIFPRAVA*SSCPAR Trigger: TCGAGCCGGGCAAGAGGATCAAGCTACAGCTCTGGG...AAATATGCACTGTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | GTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTAGTTCTTAGTCCCCGATCACGATaGGGCGGAACTGGTAGATCC | + |
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Preference number: 4 (lower is better) Translates to: VNVGIYPELTPNLFLLVLSPRSR*GGTGRS Trigger: GGATCTACCAGTTCCGCCTCATCGTGATCGGGGACT...AAGAACTAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR GCA 90 bp | AATACCCAATCTAGTAGTGTAACAAGTAAGCATCATGCTCTGAATCAAATACCTCCAGGAAGCAGAGGTTaGAGGGAGCCAAGATTGCCC | + |
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Preference number: 4 (lower is better) Translates to: NTQSSSVTSKHHALNQIPPGSRG*REPRLP Trigger: GGGCAATCTTGGCTCCCTGCAACCTCTGCTTCCTGG...AGGTATTTGATTCAGAGCATGATGCTTACTTGTTACACTACTAGATTGGGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CCA 90 bp | GTCCTAGTCGATACTTCTGAGATTGTTTACTCTGCAGGTGAACAGTGCATATTTAAAATTAGCCGGGCATaGTGGCGCACATCTGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VLVDTSEIVYSAGEQCIFKISRA*WRTSAV Trigger: AACTGCAGATGTGCGCCACCATGCCCGGCTAATTTT...AAATATGCACTGTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CCA 90 bp | AATACCCAATCTAGTAGTGTAACAAGTAAGCATCATGCTCTGAATCAAATACCTCTTGAGGCGAGGAGTTaGAGACCAGCCTGGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: NTQSSSVTSKHHALNQIPLEARS*RPAWGT Trigger: TGTTCCCCAGGCTGGTCTCCAACTCCTCGCCTCAAG...AGGTATTTGATTCAGAGCATGATGCTTACTTGTTACACTACTAGATTGGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | GTCCTAGTCGATACTTCTGAGATTGTTTACTCTGCAGGTGAACAGTGCATATTTATAAGATCGGGTTATTaGTCTGAACCGCTCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VLVDTSEIVYSAGEQCIFIRSGY*SEPLLS Trigger: GGACAGGAGCGGTTCAGATCAATAACCCGATCTTAT...AAATATGCACTGTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CCA 90 bp | GTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTAGTTCTTACTGGTAGATCCAGATaGTCTCCATCGCTCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: VNVGIYPELTPNLFLLVLTGRSR*SPSLTC Trigger: GCACGTGAGCGATGGAGACCATCTGGATCTACCAGT...AAGAACTAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CCA 90 bp | AATACCCAATCTAGTAGTGTAACAAGTAAGCATCATGCTCTGAATCAAATACCTATTAGCCGGGCATGGTaGCGCACATCTGCAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NTQSSSVTSKHHALNQIPISRAW*RTSAVP Trigger: TGGAACTGCAGATGTGCGCCACCATGCCCGGCTAAT...AGGTATTTGATTCAGAGCATGATGCTTACTTGTTACACTACTAGATTGGGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | GTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTAGTTCTTGTACTGACAATCACCTaGACCCAGGAAGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: VNVGIYPELTPNLFLLVLVLTIT*TQEAEV Trigger: AACCTCTGCTTCCTGGGTTCAGGTGATTGTCAGTAC...AAGAACTAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | TCTGCTGTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTACATTCCACAGTCTGCTaGCAGTTTTTCAGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SAVNVGIYPELTPNLFLLHSTVC*QFFSFF Trigger: GAAGAAGCTGAAAAACTGTCAGCAGACTGTGGAATG...TAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAACAGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | TCTGCTGTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTAGCCTGGGGAACATTATaGAACCCTGTGTCTACTTAT | + |
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Preference number: 4 (lower is better) Translates to: SAVNVGIYPELTPNLFLLAWGTL*NPVSTY Trigger: ATAAGTAGACACAGGGTTTCATAATGTTCCCCAGGC...TAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAACAGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR GCA 90 bp | TCTGCTGTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTAATCCACCAACTGAGTTaGGGTAATAAGATCGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: SAVNVGIYPELTPNLFLLIHQLS*GNKIGL Trigger: TAACCCGATCTTATTACCGCAACTCAGTTGGTGGAT...TAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAACAGCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | TCTGCTGTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTATCTTCCCTTGTAACTTaGCGTTGTGAAGCTAAATCA | + |
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Preference number: 4 (lower is better) Translates to: SAVNVGIYPELTPNLFLLSSLVT*RCEAKS Trigger: TGATTTAGCTTCACAACGTCAAGTTACAAGGGAAGA...TAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAACAGCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | TCTGCTGTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTACTCTCGTCAAGATTGTaGAGGATTCTTCAACATTTG | + |
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Preference number: 4 (lower is better) Translates to: SAVNVGIYPELTPNLFLLLSSRL*RILQHL Trigger: CAAATGTTGAAGAATCCTTCACAATCTTGACGAGAG...TAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAACAGCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | AATACCCAATCTAGTAGTGTAACAAGTAAGCATCATGCTCTGAATCAAATACCTCCTAGTCGATACTTCTaGGATTGTTTACTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NTQSSSVTSKHHALNQIPPSRYF*DCLLCR Trigger: CCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGG...AGGTATTTGATTCAGAGCATGATGCTTACTTGTTACACTACTAGATTGGGTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | GTCCTAGTCGATACTTCTGAGATTGTTTACTCTGCAGGTGAACAGTGCATATTTCTTATTTTCTTGTGTTaGGGCAAAATTAAGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VLVDTSEIVYSAGEQCIFLIFLC*GKIKGG Trigger: TCCTCCCTTAATTTTGCCTCAACACAAGAAAATAAG...AAATATGCACTGTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR GCA 90 bp | AATACCCAATCTAGTAGTGTAACAAGTAAGCATCATGCTCTGAATCAAATACCTTTTCCTGGGCTTTACTaGTTCCTCAGAAGAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: NTQSSSVTSKHHALNQIPFPGLY*FLRRMH Trigger: GTGCATTCTTCTGAGGAAGCAGTAAAGCCCAGGAAA...AGGTATTTGATTCAGAGCATGATGCTTACTTGTTACACTACTAGATTGGGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | TCTGCTGTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTATGTAGCATCCTTTGCTaGGGTTTCTATATACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SAVNVGIYPELTPNLFLLCSILC*GFYILH Trigger: ATGAAGTATATAGAAACCTCAGCAAAGGATGCTACA...TAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAACAGCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR GCA 90 bp | GTCCTAGTCGATACTTCTGAGATTGTTTACTCTGCAGGTGAACAGTGCATATTTTCTGCAGGTGAACAGTaGATATTTAAATGCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: VLVDTSEIVYSAGEQCIFSAGEQ*IFKCIL Trigger: CAAAATGCATTTAAATATGCACTGTTCACCTGCAGA...AAATATGCACTGTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR TCA 90 bp | AATACCCAATCTAGTAGTGTAACAAGTAAGCATCATGCTCTGAATCAAATACCTTGTTGGTATTTATCCTaGACTGACACCCAATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: NTQSSSVTSKHHALNQIPCWYLS*TDTQSV Trigger: AACAGATTGGGTGTCAGTTCAGGATAAATACCAACA...AGGTATTTGATTCAGAGCATGATGCTTACTTGTTACACTACTAGATTGGGTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR GCA 90 bp | TCTGCTGTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTACTTTATATAAGGAACTaGTATTTACGTCCTAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: SAVNVGIYPELTPNLFLLLYIRN*YLRPSR Trigger: TCGACTAGGACGTAAATAGCAGTTCCTTATATAAAG...TAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAACAGCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CAA 90 bp | GTCCTAGTCGATACTTCTGAGATTGTTTACTCTGCAGGTGAACAGTGCATATTTTGTAGCTTGATCCTCTaGCCCGGCTCGATCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VLVDTSEIVYSAGEQCIFCSLIL*PGSISS Trigger: GCTGGAGATCGAGCCGGGCAAGAGGATCAAGCTACA...AAATATGCACTGTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGACTAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS TCA 90 bp | CCTGAACTGACACCCAATCTGTTCCTGTTAGTTCTTCAGCATGTTTaGAGTCAGCAGAAGCATTCTTTCCTGGGCTTTACTGCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PELTPNLFLLVLQHV*SQQKHSFLGFTASS Trigger: TGAGGAAGCAGTAAAGCCCAGGAAAGAATGCTTCTGCTGACTTCAAACATGCTGAAGAACTAACAGGAACAGATTGGGTGTCAGTTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CAA 90 bp | AATACCCAATCTAGTAGTGTAACAAGTAAGCATCATGCTCTGAATCAAATACCTTCCCAGAGCTGTAGCTaGATCCTCTTGCCCGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: NTQSSSVTSKHHALNQIPSQSCS*ILLPGS Trigger: CGAGCCGGGCAAGAGGATCAAGCTACAGCTCTGGGA...AGGTATTTGATTCAGAGCATGATGCTTACTTGTTACACTACTAGATTGGGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS GCA 90 bp | TCAGCATGTTTGAAGTCAGCAGAAGCATTCTTTCCTGGGCTTTACTaGTTCCTCAGAAGAATGCACAGTATTTGGAACAAAACCACTTTT | + |
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Preference number: 5 (lower is better) Translates to: SACLKSAEAFFPGLY*FLRRMHSIWNKTTF Trigger: AAAAGTGGTTTTGTTCCAAATACTGTGCATTCTTCTGAGGAAGCAGTAAAGCCCAGGAAAGAATGCTTCTGCTGACTTCAAACATGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS TCA 90 bp | ATTCCACAGTCTGCTGACAGTTTTTCAGCTTCTTCCCTTGTAACTTaGCGTTGTGAAGCTAAATCACATTTATGTCCCACTAGCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: IPQSADSFSASSLVT*RCEAKSHLCPTSRN Trigger: ATTTCTGCTAGTGGGACATAAATGTGATTTAGCTTCACAACGTCAAGTTACAAGGGAAGAAGCTGAAAAACTGTCAGCAGACTGTGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CAA 90 bp | GTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTAGTTCTTCAACATTTCAAACATTaGGTGAGCGGTCCTCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: VNVGIYPELTPNLFLLVLQHFKH*VSGPPF Trigger: AAACGGAGGACCGCTCACCAAATGTTTGAAATGTTG...AAGAACTAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CAA 90 bp | GTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTAGTTCTTTCGATACTTCTGAGATaGTTTACTCTGCAGGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: VNVGIYPELTPNLFLLVLSILLR*FTLQVN Trigger: GTTCACCTGCAGAGTAAACAATCTCAGAAGTATCGA...AAGAACTAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS-3UTR CAA 90 bp | GTTAATGTTGGTATTTATCCTGAACTGACACCCAATCTGTTCCTGTTAGTTCTTGCTGTACATACATTTTaGCTTCTTCTAGCCAATCTT | + |
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Preference number: 5 (lower is better) Translates to: VNVGIYPELTPNLFLLVLAVHTF*LLLANL Trigger: AAGATTGGCTAGAAGAAGCAAAAATGTATGTACAGC...AAGAACTAACAGGAACAGATTGGGTGTCAGTTCAGGATAAATACCAACATTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS CCA 72 bp | TCTCCAGCAGGCGGGAGAAGAAGTCCACGCCGACGGTaGGGTCGCAGGCGGGGGAGCGCAGCCCGGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SPAGGRRSPRRR*GRRRGSAARGS Trigger: GCTTCCCCGGGCTGCGCTCCCCCGCCTGCGACCCCACCGTCGGCGTGGACTTCTTCTCCCGCCTGCTGGAGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS CAA 72 bp | GACACCCAATCTGTTCCTGTTAGTTCTTCAGCATGTTaGAAGTCAGCAGAAGCATTCTTTCCTGGGCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: DTQSVPVSSSAC*KSAEAFFPGLY Trigger: GTAAAGCCCAGGAAAGAATGCTTCTGCTGACTTCAAACATGCTGAAGAACTAACAGGAACAGATTGGGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS CAA 90 bp | GTCCCACTAGCAGAAATACAATCCGAAATGGCTGTACATACATTTTaGCTTCTTCTAGCCAATCTTTCACATGTTCAAAAGATCGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: VPLAEIQSEMAVHTF*LLLANLSHVQKIVG Trigger: ACCGACGATCTTTTGAACATGTGAAAGATTGGCTAGAAGAAGCAAAAATGTATGTACAGCCATTTCGGATTGTATTTCTGCTAGTGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS TCA 72 bp | TCTGCTGACAGTTTTTCAGCTTCTTCCCTTGTAACTTaGCGTTGTGAAGCTAAATCACATTTATGTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: SADSFSASSLVT*RCEAKSHLCPT Trigger: AGTGGGACATAAATGTGATTTAGCTTCACAACGTCAAGTTACAAGGGAAGAAGCTGAAAAACTGTCAGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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| CDS CAA 72 bp | GCAGAAATACAATCCGAAATGGCTGTACATACATTTTaGCTTCTTCTAGCCAATCTTTCACATGTTCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: AEIQSEMAVHTF*LLLANLSHVQK Trigger: CTTTTGAACATGTGAAAGATTGGCTAGAAGAAGCAAAAATGTATGTACAGCCATTTCGGATTGTATTTCTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320578.3 |
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