RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB38 (Homo sapiens)

Ensembl gene IDs: ENSG00000123892

Ensembl transcript IDs: ENST00000243662.11, ENST00000526372.1, ENST00000531138.1

Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATTTGGCACAGCCAGAGCAGCTGGCAACCTTGGTTGATGTGAGATaGGGCTTCACGACGTCCGGCTCAATAGACTCCATTAGGTCACAC +
Preference number: 1 (lower is better)
Translates to: DLAQPEQLATLVDVR*GFTTSGSIDSIRSH
Trigger: GTGTGACCTAATGGAGTCTATTGAGCCGGACGTCGTGAAGCCCCATCTCACATCAACCAAGGTTGCCAGCTGCTCTGGCTGTGCCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531138.1
3UTR CCA 90 bp GAGCCCCACAGCTTGAGTCAGAGAAAGCTAACAGAAAGGCACATATaGAGGCATGTCTTTTCATACAATATTCAGTTAAGCCAACATTCA +
Preference number: 1 (lower is better)
Translates to: EPHSLSQRKLTERHI*RHVFSYNIQLSQHS
Trigger: TGAATGTTGGCTTAACTGAATATTGTATGAAAAGACATGCCTCCATATGTGCCTTTCTGTTAGCTTTCTCTGACTCAAGCTGTGGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243662.11
3UTR TCA 90 bp TTTTCATACAATATTCAGTTAAGCCAACATTCAGGCCATGGCAAGTaGCAGTTAGGACAAGGACAATATAGCACACCTGTGTTCACGATT +
Preference number: 1 (lower is better)
Translates to: FSYNIQLSQHSGHGK*QLGQGQYSTPVFTI
Trigger: AATCGTGAACACAGGTGTGCTATATTGTCCTTGTCCTAACTGTCACTTGCCATGGCCTGAATGTTGGCTTAACTGAATATTGTATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243662.11
3UTR-3UTR TCA 90 bp TCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTCATCGCTGGCAACCTTGGTTaGTGTGAGATGGGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: SKELTQRQLLGLPRMEVIAGNLG*CEMGLH
Trigger: GTGAAGCCCCATCTCACATCAACCAAGGTTGCCAGC...GATGACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531138.1
3UTR-3UTR GCA 90 bp CGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTTGCCGACTGTGGCCCTaGAGGATTTTGGTCAGCTAC +
Preference number: 2 (lower is better)
Translates to: RFQRANSEATLRSAENGGCRLWP*RILVSY
Trigger: GTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCA...ACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR GCA 90 bp CAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGATGCCGACTGTGGCCCTaGAGGATTTTGGTCAGCTAC +
Preference number: 2 (lower is better)
Translates to: QITVPTVALQDFGQLHDRCRLWP*RILVSY
Trigger: GTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCA...TCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR-3UTR TCA 90 bp CAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGACAACCTTGGTTGATGTaGGATGGGGCTTCACGACGT +
Preference number: 2 (lower is better)
Translates to: QITVPTVALQDFGQLHDRQPWLM*DGASRR
Trigger: ACGTCGTGAAGCCCCATCTCACATCAACCAAGGTTG...TCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531138.1
3UTR-3UTR TCA 90 bp AATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGGCCTGTCAGGCGACACCAGGGCAAGGTaGAAGCCAGTCCTTGACTTG +
Preference number: 2 (lower is better)
Translates to: NGGHLGRKYHIYLIGLSGDTRAR*KPVLDL
Trigger: CAAGTCAAGGACTGGCTTTCACCTTGCCCTGGTGTC...GCCTGACAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR TCA 90 bp GGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCAGCAAAGGTGCCCAATTTGTGGAACAATaGGGTCATTCCTACCAGACA +
Preference number: 2 (lower is better)
Translates to: GTICGTMRSFLPDTSKGAQFVEQ*GHSYQT
Trigger: TGTCTGGTAGGAATGACCTCATTGTTCCACAAATTG...GGCACCTTTGCTGGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR-3UTR TCA 90 bp TCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAAGCCAGTCCTTGACTTaGCAGCTAGTTTGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SRFQRANSEATLRSAENGSQSLT*QLVCSS
Trigger: AGAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCT...TCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR TCA 90 bp TTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTCATAGCCAGTCCTTGACTTaGCAGCTAGTTTGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: FQRANSEATLRSAENGGHSQSLT*QLVCSS
Trigger: AGAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCT...ATGACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR TCA 90 bp AAGAAGCAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATCAATTTGTGGAACAATaGGGTCATTCCTACCAGACA +
Preference number: 2 (lower is better)
Translates to: KKQITVPTVALQDFGQLHQFVEQ*GHSYQT
Trigger: TGTCTGGTAGGAATGACCTCATTGTTCCACAAATTG...ATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR-3UTR TCA 90 bp AGGCCTGTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCGTGGTATCTCTATCCTaGCGTTTACCCAAAATGGTA +
Preference number: 2 (lower is better)
Translates to: RPVRPSENILKSGKRHQGVVSLS*RLPKMV
Trigger: TACCATTTTGGGTAAACGTCAGGATAGAGATACCAC...GCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGACAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR CCA 90 bp CTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGACTAAGAGGCATAGATCTTTaGCTTGCCACATGTGGTATC +
Preference number: 2 (lower is better)
Translates to: LWPCRILVSYMTEVCNRLRGIDL*LATCGI
Trigger: GATACCACATGTGGCAAGCCAAAGATCTATGCCTCT...TAGTCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR-3UTR TCA 90 bp CTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGACTAGTGGTATCTCTATCCTaGCGTTTACCCAAAATGGTA +
Preference number: 2 (lower is better)
Translates to: LWPCRILVSYMTEVCNRLVVSLS*RLPKMV
Trigger: TACCATTTTGGGTAAACGTCAGGATAGAGATACCAC...TAGTCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR-3UTR TCA 90 bp AGGCCTGTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCTTTTGGTCAGCTACATaGCAGAAGTTTGTAACAGAC +
Preference number: 2 (lower is better)
Translates to: RPVRPSENILKSGKRHQGFWSAT*QKFVTD
Trigger: GTCTGTTACAAACTTCTGTCATGTAGCTGACCAAAA...GCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGACAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR GCA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGACATAGATCTTTGGCTTaGCACATGTGGTATCTCTAT +
Preference number: 2 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRHRSLA*HMWYLY
Trigger: ATAGAGATACCACATGTGGCAAGCCAAAGATCTATG...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR-3UTR CCA 90 bp CTCTTAGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTTGGCTTGCCACATGTaGTATCTCTATCCTGACGTT +
Preference number: 2 (lower is better)
Translates to: LLGLPRMEVILGENITSTLACHM*YLYPDV
Trigger: AACGTCAGGATAGAGATACCACATGTGGCAAGCCAA...AGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR TCA 90 bp GTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCAAGGTGTTTTGGTCAGCTACATaGCAGAAGTTTGTAACAGAC +
Preference number: 2 (lower is better)
Translates to: VRPSENILKSGKRHQGKVFWSAT*QKFVTD
Trigger: GTCTGTTACAAACTTCTGTCATGTAGCTGACCAAAA...CACCTTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR CCA 90 bp CTTAGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAAGAGGCATAGATCTTTaGCTTGCCACATGTGGTATC +
Preference number: 2 (lower is better)
Translates to: LRSAENGGHLGRKYHIYLRGIDL*LATCGI
Trigger: GATACCACATGTGGCAAGCCAAAGATCTATGCCTCT...TAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR TCA 90 bp AATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGGCCTGTCAGGCCAATTTGTGGAACAATaGGGTCATTCCTACCAGACA +
Preference number: 2 (lower is better)
Translates to: NGGHLGRKYHIYLIGLSGQFVEQ*GHSYQT
Trigger: TGTCTGGTAGGAATGACCTCATTGTTCCACAAATTG...GCCTGACAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR TCA 90 bp ATAGCACACCTGTGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGCTATTTCTCTCTCACTaGAAAAACAGAGGCATAGAT +
Preference number: 2 (lower is better)
Translates to: IAHLCSRFQRANSEATLRLFLSH*KNRGID
Trigger: ATCTATGCCTCTGTTTTTTCAGTGAGAGAGAAATAG...CCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACACAGGTGTGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243662.11
3UTR-3UTR TCA 90 bp AAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTCTATTTCTCTCTCACTaGAAAAACAGAGGCATAGAT +
Preference number: 2 (lower is better)
Translates to: KQRHRSLACHMWYLYPDVLFLSH*KNRGID
Trigger: ATCTATGCCTCTGTTTTTTCAGTGAGAGAGAAATAG...AACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR TCA 72 bp GGATTTGGCACAGCCAGAGCAGCTGGCAACCTTGGTTaGTGTGAGATGGGGCTTCACGACGTCCGGCTCAAT +
Preference number: 3 (lower is better)
Translates to: GFGTARAAGNLG*CEMGLHDVRLN
Trigger: ATTGAGCCGGACGTCGTGAAGCCCCATCTCACATCAACCAAGGTTGCCAGCTGCTCTGGCTGTGCCAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531138.1
3UTR CCA 72 bp CAGCCAGAGCAGCTGGCAACCTTGGTTGATGTGAGATaGGGCTTCACGACGTCCGGCTCAATAGACTCCATT +
Preference number: 3 (lower is better)
Translates to: QPEQLATLVDVR*GFTTSGSIDSI
Trigger: AATGGAGTCTATTGAGCCGGACGTCGTGAAGCCCCATCTCACATCAACCAAGGTTGCCAGCTGCTCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531138.1
3UTR-3UTR CAA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGACAGAGGCATAGATCTTaGGCTTGCCACATGTGGTAT +
Preference number: 3 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRQRHRS*ACHMWY
Trigger: ATACCACATGTGGCAAGCCAAAGATCTATGCCTCTG...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR-3UTR CAA 90 bp GATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAATGGTCAGAGGCATAGATCTTaGGCTTGCCACATGTGGTAT +
Preference number: 3 (lower is better)
Translates to: DLWLATCGISILTFTQNGQRHRS*ACHMWY
Trigger: ATACCACATGTGGCAAGCCAAAGATCTATGCCTCTG...ACCATTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
3UTR-3UTR CAA 90 bp TGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATAAGCCAGTCCTTGACTaGACAGCTAGTTTGTTCTTC +
Preference number: 3 (lower is better)
Translates to: CSRFQRANSEATLRSAENKPVLD*TASLFF
Trigger: GAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCTT...ATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR CAA 90 bp CTTGGGAGAAAATATCACATCTACTTAATAGGCCTGTCAGGCCATCAGAGAATATGGCCCTGCAGGATTTaGGTCAGCTACATGACAGAA +
Preference number: 3 (lower is better)
Translates to: LGRKYHIYLIGLSGHQRIWPCRI*VSYMTE
Trigger: TTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCA...TATTCTCTGATGGCCTGACAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR-3UTR CAA 90 bp TTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTCATGACTTGACAGCTAGTTaGTTCTTCTCCCCTTTTATT +
Preference number: 3 (lower is better)
Translates to: FQRANSEATLRSAENGGHDLTAS*FFSPFI
Trigger: AATAAAAGGGGAGAAGAACAAACTAGCTGTCAAGTC...ATGACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
3UTR TCA 72 bp AATATTCAGTTAAGCCAACATTCAGGCCATGGCAAGTaGCAGTTAGGACAAGGACAATATAGCACACCTGTG +
Preference number: 3 (lower is better)
Translates to: NIQLSQHSGHGK*QLGQGQYSTPV
Trigger: CACAGGTGTGCTATATTGTCCTTGTCCTAACTGTCACTTGCCATGGCCTGAATGTTGGCTTAACTGAATATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR TCA 90 bp GGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCAGCAAAGGTGCCCAGACGTGCCGTGCCTaGCCAGGGAAGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GTICGTMRSFLPDTSKGAQTCRA*PGKRSL
Trigger: CAGGCTGCGCTTCCCTGGTCAGGCACGGCACGTCTG...GGCACCTTTGCTGGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR TCA 90 bp AGGCCTGTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCCAGACGTGCCGTGCCTaGCCAGGGAAGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RPVRPSENILKSGKRHQGQTCRA*PGKRSL
Trigger: CAGGCTGCGCTTCCCTGGTCAGGCACGGCACGTCTG...GCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGACAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp GGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAACGGCCAGACGTGCCGTaGCTGACCAGGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GIDLWLATCGISILTFTQRPDVP*LTREAQ
Trigger: CTGCGCTTCCCTGGTCAGGCACGGCACGTCTGGCCG...TTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp GATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAATGGTTCCTTGTGCGGGGCCTaGATCCTGGCGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: DLWLATCGISILTFTQNGSLCGA*ILAAGQ
Trigger: CTGGCCGGCCGCCAGGATGCAGGCCCCGCACAAGGA...ACCATTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR TCA 90 bp AAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTCAGACGTGCCGTGCCTaGCCAGGGAAGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KQRHRSLACHMWYLYPDVQTCRA*PGKRSL
Trigger: CAGGCTGCGCTTCCCTGGTCAGGCACGGCACGTCTG...AACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp CTCTTAGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTCGGCCAGACGTGCCGTaGCTGACCAGGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LLGLPRMEVILGENITSTRPDVP*LTREAQ
Trigger: CTGCGCTTCCCTGGTCAGGCACGGCACGTCTGGCCG...AGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCTAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGATACAGGTGCTCCTTGTaGGGGGCCTGCATCCTGGCG +
Preference number: 4 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRYRCSL*GACILA
Trigger: CGCCAGGATGCAGGCCCCGCACAAGGAGCACCTGTA...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp CTTGGGAGAAAATATCACATCTACTTAATAGGCCTGTCAGGCCATCAGAGAATATCCTTGTGCGGGGCCTaGATCCTGGCGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGRKYHIYLIGLSGHQRISLCGA*ILAAGQ
Trigger: CTGGCCGGCCGCCAGGATGCAGGCCCCGCACAAGGA...TATTCTCTGATGGCCTGACAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp GGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAATACAGGTGCTCCTTGTaGGGGGCCTGCATCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GIDLWLATCGISILTFTQYRCSL*GACILA
Trigger: CGCCAGGATGCAGGCCCCGCACAAGGAGCACCTGTA...TTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp CAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGCAACTTGTACAGGTaGTCCTTGTGCGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QITVPTVALQDFGQLHDRSNLYR*SLCGAC
Trigger: GCAGGCCCCGCACAAGGAGCACCTGTACAAGTTGCT...TCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp AAGAAGCAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGCGATATCCCAGAGCTaGAGGCGCACCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KKQITVPTVALQDFGQLHAISQS*RRTTVS
Trigger: GGAGACTGTGGTGCGCCTGCAGCTCTGGGATATCGC...ATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGAGCGATATCCCAGAGCTaGAGGCGCACCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRAISQS*RRTTVS
Trigger: GGAGACTGTGGTGCGCCTGCAGCTCTGGGATATCGC...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp CGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTGCTGGCAACCTTGGTTaGTGTGAGATGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RFQRANSEATLRSAENGGAGNLG*CEMGLH
Trigger: GTGAAGCCCCATCTCACATCAACCAAGGTTGCCAGC...ACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp CAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAGCTGGCAACCTTGGTTaGTGTGAGATGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QITVPTVALQDFGQLHDRAGNLG*CEMGLH
Trigger: GTGAAGCCCCATCTCACATCAACCAAGGTTGCCAGC...TCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR TCA 90 bp GGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCAGCAAAGGTGCCGACACCAGGGCAAGGTaGAAGCCAGTCCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: GTICGTMRSFLPDTSKGADTRAR*KPVLDL
Trigger: CAAGTCAAGGACTGGCTTTCACCTTGCCCTGGTGTC...GGCACCTTTGCTGGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp AGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATACGGCCAGACGTGCCGTaGCTGACCAGGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RSAENGGHLGRKYHIYLIRPDVP*LTREAQ
Trigger: CTGCGCTTCCCTGGTCAGGCACGGCACGTCTGGCCG...TATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp GATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAATGGTTACAGGTGCTCCTTGTaGGGGGCCTGCATCCTGGCG +
Preference number: 4 (lower is better)
Translates to: DLWLATCGISILTFTQNGYRCSL*GACILA
Trigger: CGCCAGGATGCAGGCCCCGCACAAGGAGCACCTGTA...ACCATTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp AGGCCTGTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCAGCAACTTGTACAGGTaGTCCTTGTGCGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RPVRPSENILKSGKRHQGSNLYR*SLCGAC
Trigger: GCAGGCCCCGCACAAGGAGCACCTGTACAAGTTGCT...GCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGACAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp GGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCAGCAAAGGTGCCTGCCGACTGTGGCCCTaGAGGATTTTGGTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GTICGTMRSFLPDTSKGACRLWP*RILVSY
Trigger: GTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCA...GGCACCTTTGCTGGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp AGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCAAGGTGAAAGCCAGTCCGTCTCCGGGTCCCAGTaGAGCACCTTGAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: REYTEIWKKTPGQGESQSVSGSQ*STLSAK
Trigger: CTTCGCGCTCAAGGTGCTCCACTGGGACCCGGAGAC...GGACTGGCTTTCACCTTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CCA 90 bp GGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCAGCAAAGGTGCCTTGGTTGATGTGAGATaGGGCTTCACGACGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GTICGTMRSFLPDTSKGALVDVR*GFTTSG
Trigger: GCCGGACGTCGTGAAGCCCCATCTCACATCAACCAA...GGCACCTTTGCTGGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR TCA 90 bp TCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGCTGGCAACCTTGGTTaGTGTGAGATGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SRFQRANSEATLRSAENGAGNLG*CEMGLH
Trigger: GTGAAGCCCCATCTCACATCAACCAAGGTTGCCAGC...TCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp AAAAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGAGCAACTTGTACAGGTaGTCCTTGTGCGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KNRGIDLWLATCGISILTSNLYR*SLCGAC
Trigger: GCAGGCCCCGCACAAGGAGCACCTGTACAAGTTGCT...CGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGACATCCTACGAAACCGTaGTCCTTGCAGAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRHPTKP*SLQNWS
Trigger: GGACCAGTTCTGCAAGGAGCACGGTTTCGTAGGATG...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR GCA 90 bp GTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCAAGGTGTGCCGACTGTGGCCCTaGAGGATTTTGGTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VRPSENILKSGKRHQGKVCRLWP*RILVSY
Trigger: GTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCA...CACCTTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CCA 90 bp AGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGTCTCCGGGTCCCAGTaGAGCACCTTGAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: RSAENGGHLGRKYHIYLIVSGSQ*STLSAK
Trigger: CTTCGCGCTCAAGGTGCTCCACTGGGACCCGGAGAC...TATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CCA 90 bp TCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTCATCTGCTCCTTGCAGAACTaGTCCATCTTGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: SKELTQRQLLGLPRMEVICSLQN*SILRPL
Trigger: CAATGGCCTCAAGATGGACCAGTTCTGCAAGGAGCA...GATGACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR TCA 90 bp AAAAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGGACACCAGGGCAAGGTaGAAGCCAGTCCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: KNRGIDLWLATCGISILTDTRAR*KPVLDL
Trigger: CAAGTCAAGGACTGGCTTTCACCTTGCCCTGGTGTC...CGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp AAGAAGCAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATTCAGGCCATGGCAAGTaGCAGTTAGGACAAGGACAA +
Preference number: 4 (lower is better)
Translates to: KKQITVPTVALQDFGQLHSGHGK*QLGQGQ
Trigger: TTGTCCTTGTCCTAACTGTCACTTGCCATGGCCTGA...ATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR CCA 90 bp TTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTCATAGCACATCCTTCCCCTaGTCACATTTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: FQRANSEATLRSAENGGHSTSFP*SHLLAN
Trigger: GTTGGCCAACAAATGTGACCAGGGGAAGGATGTGCT...ATGACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR CCA 90 bp AGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCAAGGTGAAAGCCAGTCCTTGGTTGATGTGAGATaGGGCTTCACGACGTCCGGC +
Preference number: 4 (lower is better)
Translates to: REYTEIWKKTPGQGESQSLVDVR*GFTTSG
Trigger: GCCGGACGTCGTGAAGCCCCATCTCACATCAACCAA...GGACTGGCTTTCACCTTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp ATAGCACACCTGTGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGGGCCAACAAAACCACTaGAACCGGTTTGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: IAHLCSRFQRANSEATLRGQQNH*NRFAIR
Trigger: CCTAATGGCAAACCGGTTTCAGTGGTTTTGTTGGCC...CCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACACAGGTGTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR TCA 90 bp AAAAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGCAACCTTGGTTGATGTaGGATGGGGCTTCACGACGT +
Preference number: 4 (lower is better)
Translates to: KNRGIDLWLATCGISILTQPWLM*DGASRR
Trigger: ACGTCGTGAAGCCCCATCTCACATCAACCAAGGTTG...CGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp AAAAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGCATCCTACGAAACCGTaGTCCTTGCAGAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: KNRGIDLWLATCGISILTHPTKP*SLQNWS
Trigger: GGACCAGTTCTGCAAGGAGCACGGTTTCGTAGGATG...CGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CCA 90 bp CTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGACTAAGCACATCCTTCCCCTaGTCACATTTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LWPCRILVSYMTEVCNRLSTSFP*SHLLAN
Trigger: GTTGGCCAACAAATGTGACCAGGGGAAGGATGTGCT...TAGTCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CCA 90 bp GGTAAAAATAGAGGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCTTGGTTGATGTGAGATaGGGCTTCACGACGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GKNRGTICGTMRSFLPDTLVDVR*GFTTSG
Trigger: GCCGGACGTCGTGAAGCCCCATCTCACATCAACCAA...GGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCCTCTATTTTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp GGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCAGCAAAGGTGCCAGAGGCATAGATCTTTaGCTTGCCACATGTGGTATC +
Preference number: 4 (lower is better)
Translates to: GTICGTMRSFLPDTSKGARGIDL*LATCGI
Trigger: GATACCACATGTGGCAAGCCAAAGATCTATGCCTCT...GGCACCTTTGCTGGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp CAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGAGGCATAGATCTTTaGCTTGCCACATGTGGTATC +
Preference number: 4 (lower is better)
Translates to: QITVPTVALQDFGQLHDRRGIDL*LATCGI
Trigger: GATACCACATGTGGCAAGCCAAAGATCTATGCCTCT...TCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR TCA 90 bp TGTGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAAGCCAGTCCTTGACTTaGCAGCTAGTTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CVHDSKELTQRQLLGLPRSQSLT*QLVCSS
Trigger: AGAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCT...TCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp AAGAAGCAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATAGCCAGTCCTTGACTTaGCAGCTAGTTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KKQITVPTVALQDFGQLHSQSLT*QLVCSS
Trigger: AGAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCT...ATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp TGTGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAAGAGGCATAGATCTTTaGCTTGCCACATGTGGTATC +
Preference number: 4 (lower is better)
Translates to: CVHDSKELTQRQLLGLPRRGIDL*LATCGI
Trigger: GATACCACATGTGGCAAGCCAAAGATCTATGCCTCT...TCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp CAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGATTTTGGTCAGCTACATaGCAGAAGTTTGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: QITVPTVALQDFGQLHDRFWSAT*QKFVTD
Trigger: GTCTGTTACAAACTTCTGTCATGTAGCTGACCAAAA...TCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp GTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCAAGGTGAAATCTTTCTTGACCTaGGATATCCCAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VRPSENILKSGKRHQGKVKSFLT*DIPELQ
Trigger: CTGCAGCTCTGGGATATCGCAGGTCAAGAAAGATTT...CACCTTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR GCA 90 bp CAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAATCGAAGACAATAAATaGACCCATAGCTTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: QITVPTVALQDFGQLHDRIEDNK*THSFSV
Trigger: TACCGAGAAGCTATGGGTGCATTTATTGTCTTCGAT...TCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CCA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGAGTTTCACCAGGCATCTaGAGGCTTCATCAATGTTTA +
Preference number: 4 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRVSPGI*RLHQCL
Trigger: TAAACATTGATGAAGCCTCCAGATGCCTGGTGAAAC...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR TCA 90 bp GGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAGTGGTATCTCTATCCTaGCGTTTACCCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: GIDLWLATCGISILTFTQVVSLS*RLPKMV
Trigger: TACCATTTTGGGTAAACGTCAGGATAGAGATACCAC...TTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR TCA 90 bp AAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTAGCCAGTCCTTGACTTaGCAGCTAGTTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KQRHRSLACHMWYLYPDVSQSLT*QLVCSS
Trigger: AGAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCT...AACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR GCA 90 bp CAAAATGGTAAAAATAGAGGCACAATTTGTGGAACAATGAGGTCATTCCTACCATGCCGACTGTGGCCCTaGAGGATTTTGGTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: QNGKNRGTICGTMRSFLPCRLWP*RILVSY
Trigger: GTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCA...TGGTAGGAATGACCTCATTGTTCCACAAATTGTGCCTCTATTTTTACCATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp AAAAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTGGCTTGCCACATGTaGTATCTCTATCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: KNRGIDLWLATCGISILTLACHM*YLYPDV
Trigger: AACGTCAGGATAGAGATACCACATGTGGCAAGCCAA...CGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp TGTGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAACAGAAAGGCACATATaGAGGCATGTCTTTTCATAC +
Preference number: 4 (lower is better)
Translates to: CVHDSKELTQRQLLGLPRTERHI*RHVFSY
Trigger: GTATGAAAAGACATGCCTCCATATGTGCCTTTCTGT...TCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR TCA 90 bp AATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGGCCTGTCAGGCTTTCCAAATCTTTCTTaGCCTGCGATATCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: NGGHLGRKYHIYLIGLSGFPNLS*PAISQS
Trigger: GCTCTGGGATATCGCAGGTCAAGAAAGATTTGGAAA...GCCTGACAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR TCA 90 bp AGGCCTGTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCCTATTTCTCTCTCACTaGAAAAACAGAGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: RPVRPSENILKSGKRHQGLFLSH*KNRGID
Trigger: ATCTATGCCTCTGTTTTTTCAGTGAGAGAGAAATAG...GCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGACAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp TCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGACTATTTCTCTCTCACTaGAAAAACAGAGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: SRFQRANSEATLRSAENGLFLSH*KNRGID
Trigger: ATCTATGCCTCTGTTTTTTCAGTGAGAGAGAAATAG...TCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp GGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAACATAGATCTTTGGCTTaGCACATGTGGTATCTCTAT +
Preference number: 4 (lower is better)
Translates to: GIDLWLATCGISILTFTQHRSLA*HMWYLY
Trigger: ATAGAGATACCACATGTGGCAAGCCAAAGATCTATG...TTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp AAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTGTTTCACCAGGCATCTaGAGGCTTCATCAATGTTTA +
Preference number: 4 (lower is better)
Translates to: KQRHRSLACHMWYLYPDVVSPGI*RLHQCL
Trigger: TAAACATTGATGAAGCCTCCAGATGCCTGGTGAAAC...AACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR TCA 90 bp CTTAGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTACAATTTGTGGAACAATaGGGTCATTCCTACCAGACA +
Preference number: 4 (lower is better)
Translates to: LRSAENGGHLGRKYHIYLQFVEQ*GHSYQT
Trigger: TGTCTGGTAGGAATGACCTCATTGTTCCACAAATTG...TAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp CTCTTAGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTTTTGGTCAGCTACATaGCAGAAGTTTGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: LLGLPRMEVILGENITSTFWSAT*QKFVTD
Trigger: GTCTGTTACAAACTTCTGTCATGTAGCTGACCAAAA...AGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCTAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp AAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTATCGAAGACAATAAATaGACCCATAGCTTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: KQRHRSLACHMWYLYPDVIEDNK*THSFSV
Trigger: TACCGAGAAGCTATGGGTGCATTTATTGTCTTCGAT...AACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR GCA 90 bp GCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGGCCTGCATAGATCTTTGGCTTaGCACATGTGGTATCTCTAT +
Preference number: 4 (lower is better)
Translates to: AENGGHLGRKYHIYLIGLHRSLA*HMWYLY
Trigger: ATAGAGATACCACATGTGGCAAGCCAAAGATCTATG...CAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CCA 90 bp AATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGGCCTGTCAGGCGTTTCACCAGGCATCTaGAGGCTTCATCAATGTTTA +
Preference number: 4 (lower is better)
Translates to: NGGHLGRKYHIYLIGLSGVSPGI*RLHQCL
Trigger: TAAACATTGATGAAGCCTCCAGATGCCTGGTGAAAC...GCCTGACAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CCA 90 bp AGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATATTGGCTTGCCACATGTaGTATCTCTATCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: RSAENGGHLGRKYHIYLILACHM*YLYPDV
Trigger: AACGTCAGGATAGAGATACCACATGTGGCAAGCCAA...TATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CCA 90 bp GTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCAAGGTGGAATATACTGAAATCTaGAAAAAGACACCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VRPSENILKSGKRHQGKVEYTEI*KKTPGQ
Trigger: TTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTC...CACCTTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp AGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGTGGTATCTCTATCCTaGCGTTTACCCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: RSAENGGHLGRKYHIYLIVVSLS*RLPKMV
Trigger: TACCATTTTGGGTAAACGTCAGGATAGAGATACCAC...TATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR GCA 90 bp CATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAACATAGATCTTTGGCTTaGCACATGTGGTATCTCTAT +
Preference number: 4 (lower is better)
Translates to: HRSLACHMWYLYPDVYPKHRSLA*HMWYLY
Trigger: ATAGAGATACCACATGTGGCAAGCCAAAGATCTATG...TTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp GCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGGCCTGGAATGGAGGTCATCTTaGGAGAAAATATCACATCTA +
Preference number: 4 (lower is better)
Translates to: AENGGHLGRKYHIYLIGLEWRSS*EKISHL
Trigger: TAGATGTGATATTTTCTCCCAAGATGACCTCCATTC...CAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp AGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATATTTTGGTCAGCTACATaGCAGAAGTTTGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: RSAENGGHLGRKYHIYLIFWSAT*QKFVTD
Trigger: GTCTGTTACAAACTTCTGTCATGTAGCTGACCAAAA...TATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CCA 90 bp CAAAATGGTAAAAATAGAGGCACAATTTGTGGAACAATGAGGTCATTCCTACCATTGGCTTGCCACATGTaGTATCTCTATCCTGACGTT +
Preference number: 4 (lower is better)
Translates to: QNGKNRGTICGTMRSFLPLACHM*YLYPDV
Trigger: AACGTCAGGATAGAGATACCACATGTGGCAAGCCAA...TGGTAGGAATGACCTCATTGTTCCACAAATTGTGCCTCTATTTTTACCATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CCA 90 bp AATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGGCCTGTCAGGCGAATATACTGAAATCTaGAAAAAGACACCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: NGGHLGRKYHIYLIGLSGEYTEI*KKTPGQ
Trigger: TTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTC...GCCTGACAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CCA 90 bp CTTAGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAGAATGGAGGTCATCTTaGGAGAAAATATCACATCTA +
Preference number: 4 (lower is better)
Translates to: LRSAENGGHLGRKYHIYLEWRSS*EKISHL
Trigger: TAGATGTGATATTTTCTCCCAAGATGACCTCCATTC...TAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR TCA 90 bp CAAAATGGTAAAAATAGAGGCACAATTTGTGGAACAATGAGGTCATTCCTACCACAATTTGTGGAACAATaGGGTCATTCCTACCAGACA +
Preference number: 4 (lower is better)
Translates to: QNGKNRGTICGTMRSFLPQFVEQ*GHSYQT
Trigger: TGTCTGGTAGGAATGACCTCATTGTTCCACAAATTG...TGGTAGGAATGACCTCATTGTTCCACAAATTGTGCCTCTATTTTTACCATTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS CCA 90 bp TCACCAGCAACTTGTACAGGTGCTCCTTGTGCGGGGCCTGCATCCTaGCGGCCGGCCAGACGTGCCGTGCCTGACCAGGGAAGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: SPATCTGAPCAGPAS*RPARRAVPDQGSAA
Trigger: GGCTGCGCTTCCCTGGTCAGGCACGGCACGTCTGGCCGGCCGCCAGGATGCAGGCCCCGCACAAGGAGCACCTGTACAAGTTGCTGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp AAGAAGCAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATTTGTACAGGTGCTCCTaGTGCGGGGCCTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: KKQITVPTVALQDFGQLHLYRCS*CGACIL
Trigger: CAGGATGCAGGCCCCGCACAAGGAGCACCTGTACAA...ATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp GGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCAGCAAAGGTGCCGAGCAGCTGGCAACCTaGGTTGATGTGAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: GTICGTMRSFLPDTSKGAEQLAT*VDVRWG
Trigger: GCCCCATCTCACATCAACCAAGGTTGCCAGCTGCTC...GGCACCTTTGCTGGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp GGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAGAGCAGCTGGCAACCTaGGTTGATGTGAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: GIDLWLATCGISILTFTQEQLAT*VDVRWG
Trigger: GCCCCATCTCACATCAACCAAGGTTGCCAGCTGCTC...TTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp GGTAAAAATAGAGGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCTTGTACAGGTGCTCCTaGTGCGGGGCCTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: GKNRGTICGTMRSFLPDTLYRCS*CGACIL
Trigger: CAGGATGCAGGCCCCGCACAAGGAGCACCTGTACAA...GGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCCTCTATTTTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp AGGCCTGTCAGGCCATCAGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCCCAATCACCAGCAACTaGTACAGGTGCTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: RPVRPSENILKSGKRHQGPITSN*YRCSLC
Trigger: GCACAAGGAGCACCTGTACAAGTTGCTGGTGATTGG...GCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCTGATGGCCTGACAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp TGTGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAACGAAACCGTGCTCCTaGCAGAACTGGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: CVHDSKELTQRQLLGLPRTKPCS*QNWSIL
Trigger: CAAGATGGACCAGTTCTGCAAGGAGCACGGTTTCGT...TCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR CAA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGAACGAAACCGTGCTCCTaGCAGAACTGGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRTKPCS*QNWSIL
Trigger: CAAGATGGACCAGTTCTGCAAGGAGCACGGTTTCGT...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CAA 90 bp GATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAATGGTGAGCAGCTGGCAACCTaGGTTGATGTGAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: DLWLATCGISILTFTQNGEQLAT*VDVRWG
Trigger: GCCCCATCTCACATCAACCAAGGTTGCCAGCTGCTC...ACCATTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGAAAATCTTTCTTGACCTaGAGCGCGAAGTCCACGCCG +
Preference number: 5 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRKSFLT*SAKSTP
Trigger: CGGCGTGGACTTCGCGCTCAAGGTCAAGAAAGATTT...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526372.1
CDS-3UTR CAA 90 bp AGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATATTGTACAGGTGCTCCTaGTGCGGGGCCTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: RSAENGGHLGRKYHIYLILYRCS*CGACIL
Trigger: CAGGATGCAGGCCCCGCACAAGGAGCACCTGTACAA...TATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp GGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAACCAATCACCAGCAACTaGTACAGGTGCTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GIDLWLATCGISILTFTQPITSN*YRCSLC
Trigger: GCACAAGGAGCACCTGTACAAGTTGCTGGTGATTGG...TTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp TCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTCATCGTTTCCAAATCTTTCTaGACCTGCGATATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SKELTQRQLLGLPRMEVIVSKSF*TCDIPE
Trigger: CTCTGGGATATCGCAGGTCAAGAAAGATTTGGAAAC...GATGACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR CAA 90 bp TGTGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGATCCATCTTGAGGCCATaGTTCATGAGCACATCCTTC +
Preference number: 5 (lower is better)
Translates to: CVHDSKELTQRQLLGLPRSILRP*FMSTSF
Trigger: GAAGGATGTGCTCATGAACAATGGCCTCAAGATGGA...TCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR CAA 90 bp TTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATGGAGGTCATCAGAGGCATAGATCTTaGGCTTGCCACATGTGGTAT +
Preference number: 5 (lower is better)
Translates to: FQRANSEATLRSAENGGHQRHRS*ACHMWY
Trigger: ATACCACATGTGGCAAGCCAAAGATCTATGCCTCTG...ATGACCTCCATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp TGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAATTGGCCCTGCAGGATTTaGGTCAGCTACATGACAGAA +
Preference number: 5 (lower is better)
Translates to: CSRFQRANSEATLRSAENWPCRI*VSYMTE
Trigger: TTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCA...ATTCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp AAAAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTGGCCCTGCAGGATTTaGGTCAGCTACATGACAGAA +
Preference number: 5 (lower is better)
Translates to: KNRGIDLWLATCGISILTWPCRI*VSYMTE
Trigger: TTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCA...CGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp AGAGAATATACTGAAATCTGGAAAAAGACACCAGGGCAAGGTGAAAGCCAGTCCTGGCCCTGCAGGATTTaGGTCAGCTACATGACAGAA +
Preference number: 5 (lower is better)
Translates to: REYTEIWKKTPGQGESQSWPCRI*VSYMTE
Trigger: TTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCA...GGACTGGCTTTCACCTTGCCCTGGTGTCTTTTTCCAGATTTCAGTATATTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp TGTGTTCACGATTCCAAAGAGCTAACTCAGAGGCAACTCTTAGGTCTGCCGAGAAAGCCAGTCCTTGACTaGACAGCTAGTTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: CVHDSKELTQRQLLGLPRKPVLD*TASLFF
Trigger: GAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCTT...TCTCGGCAGACCTAAGAGTTGCCTCTGAGTTAGCTCTTTGGAATCGTGAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp GGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAGTTTCCAAATCTTTCTaGACCTTGAGCGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GIDLWLATCGISILTFTQVSKSF*TLSAKS
Trigger: GGACTTCGCGCTCAAGGTCAAGAAAGATTTGGAAAC...TTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526372.1
CDS-3UTR CAA 90 bp AAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTACCACTGAAACCGGTTaGCCATTAGGGAGACTTAAC +
Preference number: 5 (lower is better)
Translates to: KQRHRSLACHMWYLYPDVTTETG*PLGRLN
Trigger: GTTAAGTCTCCCTAATGGCAAACCGGTTTCAGTGGT...AACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CAA 90 bp GATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAATGGTACCACTGAAACCGGTTaGCCATTAGGGAGACTTAAC +
Preference number: 5 (lower is better)
Translates to: DLWLATCGISILTFTQNGTTETG*PLGRLN
Trigger: GTTAAGTCTCCCTAATGGCAAACCGGTTTCAGTGGT...ACCATTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CAA 90 bp AAAAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTCCCCTGGTCACATTaGTTGGCCAACAAAACCACT +
Preference number: 5 (lower is better)
Translates to: KNRGIDLWLATCGISILTFPWSH*LANKTT
Trigger: AGTGGTTTTGTTGGCCAACAAATGTGACCAGGGGAA...CGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CAA 90 bp AAAAACAGAGGCATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTCCATCTTGAGGCCATaGTTCATGAGCACATCCTTC +
Preference number: 5 (lower is better)
Translates to: KNRGIDLWLATCGISILTSILRP*FMSTSF
Trigger: GAAGGATGTGCTCATGAACAATGGCCTCAAGATGGA...CGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATGCCTCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CAA 90 bp CAAATAACAGTGCCGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGATTAGGTCACACTCATTaGCAAGTATGTGTTTCACCA +
Preference number: 5 (lower is better)
Translates to: QITVPTVALQDFGQLHDRLGHTH*QVCVSP
Trigger: TGGTGAAACACATACTTGCAAATGAGTGTGACCTAA...TCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCGGCACTGTTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp GGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCAGCAAAGGTGCCGACTTGACAGCTAGTTaGTTCTTCTCCCCTTTTATT +
Preference number: 5 (lower is better)
Translates to: GTICGTMRSFLPDTSKGADLTAS*FFSPFI
Trigger: AATAAAAGGGGAGAAGAACAAACTAGCTGTCAAGTC...GGCACCTTTGCTGGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp AGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGAGGAGCCCCACAGCTaGAGTCAGAGAAAGCTAACA +
Preference number: 5 (lower is better)
Translates to: RSAENGGHLGRKYHIYLIEEPHS*SQRKLT
Trigger: TGTTAGCTTTCTCTGACTCAAGCTGTGGGGCTCCTC...TATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243662.11
CDS-3UTR CAA 90 bp CTTAGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTACAGAGGCATAGATCTTaGGCTTGCCACATGTGGTAT +
Preference number: 5 (lower is better)
Translates to: LRSAENGGHLGRKYHIYLQRHRS*ACHMWY
Trigger: ATACCACATGTGGCAAGCCAAAGATCTATGCCTCTG...TAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp CGACTGTGGCCCTGCAGGATTTTGGTCAGCTACATGACAGAAGTTTGTAACAGAGACTTGACAGCTAGTTaGTTCTTCTCCCCTTTTATT +
Preference number: 5 (lower is better)
Translates to: RLWPCRILVSYMTEVCNRDLTAS*FFSPFI
Trigger: AATAAAAGGGGAGAAGAACAAACTAGCTGTCAAGTC...TCTGTTACAAACTTCTGTCATGTAGCTGACCAAAATCCTGCAGGGCCACAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp GCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATAGGCCTGAAGCCAGTCCTTGACTaGACAGCTAGTTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AENGGHLGRKYHIYLIGLKPVLD*TASLFF
Trigger: GAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCTT...CAGGCCTATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp GATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAATGGTAAGCCAGTCCTTGACTaGACAGCTAGTTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: DLWLATCGISILTFTQNGKPVLD*TASLFF
Trigger: GAAGAACAAACTAGCTGTCAAGTCAAGGACTGGCTT...ACCATTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp GATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAATGGTGACTTGACAGCTAGTTaGTTCTTCTCCCCTTTTATT +
Preference number: 5 (lower is better)
Translates to: DLWLATCGISILTFTQNGDLTAS*FFSPFI
Trigger: AATAAAAGGGGAGAAGAACAAACTAGCTGTCAAGTC...ACCATTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp CAAAATGGTAAAAATAGAGGCACAATTTGTGGAACAATGAGGTCATTCCTACCATTCCCCTGGTCACATTaGTTGGCCAACAAAACCACT +
Preference number: 5 (lower is better)
Translates to: QNGKNRGTICGTMRSFLPFPWSH*LANKTT
Trigger: AGTGGTTTTGTTGGCCAACAAATGTGACCAGGGGAA...TGGTAGGAATGACCTCATTGTTCCACAAATTGTGCCTCTATTTTTACCATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CAA 90 bp GGTAAAAATAGAGGCACAATTTGTGGAACAATGAGGTCATTCCTACCAGACACCTTAGGTCACACTCATTaGCAAGTATGTGTTTCACCA +
Preference number: 5 (lower is better)
Translates to: GKNRGTICGTMRSFLPDTLGHTH*QVCVSP
Trigger: TGGTGAAACACATACTTGCAAATGAGTGTGACCTAA...GGTGTCTGGTAGGAATGACCTCATTGTTCCACAAATTGTGCCTCTATTTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS-3UTR CAA 90 bp CATAGATCTTTGGCTTGCCACATGTGGTATCTCTATCCTGACGTTTACCCAAAATTAGGGAGACTTAACTaGGAGTCCAAATCATTTTTC +
Preference number: 5 (lower is better)
Translates to: HRSLACHMWYLYPDVYPKLGRLN*ESKSFF
Trigger: GAAAAATGATTTGGACTCCAAGTTAAGTCTCCCTAA...TTTTGGGTAAACGTCAGGATAGAGATACCACATGTGGCAAGCCAAAGATCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS-3UTR CAA 90 bp AGGTCTGCCGAGAATGGAGGTCATCTTGGGAGAAAATATCACATCTACTTAATATTAGGTCACACTCATTaGCAAGTATGTGTTTCACCA +
Preference number: 5 (lower is better)
Translates to: RSAENGGHLGRKYHIYLILGHTH*QVCVSP
Trigger: TGGTGAAACACATACTTGCAAATGAGTGTGACCTAA...TATTAAGTAGATGTGATATTTTCTCCCAAGATGACCTCCATTCTCGGCAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000531138.1
CDS-3UTR CAA 90 bp CAAAATGGTAAAAATAGAGGCACAATTTGTGGAACAATGAGGTCATTCCTACCATTAGGGAGACTTAACTaGGAGTCCAAATCATTTTTC +
Preference number: 5 (lower is better)
Translates to: QNGKNRGTICGTMRSFLPLGRLN*ESKSFF
Trigger: GAAAAATGATTTGGACTCCAAGTTAAGTCTCCCTAA...TGGTAGGAATGACCTCATTGTTCCACAAATTGTGCCTCTATTTTTACCATTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS CAA 90 bp CCCACGCCCAGGTCGCCAATCACCAGCAACTTGTACAGGTGCTCCTaGTGCGGGGCCTGCATCCTGGCGGCCGGCCAGACGTGCCGTGCC +
Preference number: 6 (lower is better)
Translates to: PTPRSPITSNLYRCS*CGACILAAGQTCRA
Trigger: GGCACGGCACGTCTGGCCGGCCGCCAGGATGCAGGCCCCGCACAAGGAGCACCTGTACAAGTTGCTGGTGATTGGCGACCTGGGCGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS CCA 72 bp ACTTGTACAGGTGCTCCTTGTGCGGGGCCTGCATCCTaGCGGCCGGCCAGACGTGCCGTGCCTGACCAGGGA +
Preference number: 6 (lower is better)
Translates to: TCTGAPCAGPAS*RPARRAVPDQG
Trigger: TCCCTGGTCAGGCACGGCACGTCTGGCCGGCCGCCAGGATGCAGGCCCCGCACAAGGAGCACCTGTACAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS GCA 72 bp TCGCCAATCACCAGCAACTTGTACAGGTGCTCCTTGTaGGGGGCCTGCATCCTGGCGGCCGGCCAGACGTGC +
Preference number: 6 (lower is better)
Translates to: SPITSNLYRCSL*GACILAAGQTC
Trigger: GCACGTCTGGCCGGCCGCCAGGATGCAGGCCCCGCACAAGGAGCACCTGTACAAGTTGCTGGTGATTGGCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS CAA 72 bp AGGTCGCCAATCACCAGCAACTTGTACAGGTGCTCCTaGTGCGGGGCCTGCATCCTGGCGGCCGGCCAGACG +
Preference number: 6 (lower is better)
Translates to: RSPITSNLYRCS*CGACILAAGQT
Trigger: CGTCTGGCCGGCCGCCAGGATGCAGGCCCCGCACAAGGAGCACCTGTACAAGTTGCTGGTGATTGGCGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243662.11
ENST00000526372.1
ENST00000531138.1
CDS GCA 72 bp CATCAATGTTTATATTTTCCTGCGATATCCCAGAGCTaGAGGCGCACCACAGTCTCCGGGTCCCAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: HQCLYFPAISQS*RRTTVSGSQWS
Trigger: GCTCCACTGGGACCCGGAGACTGTGGTGCGCCTGCAGCTCTGGGATATCGCAGGAAAATATAAACATTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531138.1
CDS CAA 72 bp CCTACGAAACCGTGCTCCTTGCAGAACTGGTCCATCTaGAGGCCATTGTTCATGAGCACATCCTTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: PTKPCSLQNWSI*RPLFMSTSFPW
Trigger: CCAGGGGAAGGATGTGCTCATGAACAATGGCCTCAAGATGGACCAGTTCTGCAAGGAGCACGGTTTCGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS CAA 72 bp CCATTGTTCATGAGCACATCCTTCCCCTGGTCACATTaGTTGGCCAACAAAACCACTGAAACCGGTTTGCCA +
Preference number: 6 (lower is better)
Translates to: PLFMSTSFPWSH*LANKTTETGLP
Trigger: TGGCAAACCGGTTTCAGTGGTTTTGTTGGCCAACAAATGTGACCAGGGGAAGGATGTGCTCATGAACAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS CAA 90 bp ATCTTGAGGCCATTGTTCATGAGCACATCCTTCCCCTGGTCACATTaGTTGGCCAACAAAACCACTGAAACCGGTTTGCCATTAGGGAGA +
Preference number: 6 (lower is better)
Translates to: ILRPLFMSTSFPWSH*LANKTTETGLPLGR
Trigger: TCTCCCTAATGGCAAACCGGTTTCAGTGGTTTTGTTGGCCAACAAATGTGACCAGGGGAAGGATGTGCTCATGAACAATGGCCTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS CCA 72 bp ATCTTGAGGCCATTGTTCATGAGCACATCCTTCCCCTaGTCACATTTGTTGGCCAACAAAACCACTGAAACC +
Preference number: 6 (lower is better)
Translates to: ILRPLFMSTSFP*SHLLANKTTET
Trigger: GGTTTCAGTGGTTTTGTTGGCCAACAAATGTGACCAGGGGAAGGATGTGCTCATGAACAATGGCCTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1
CDS CAA 72 bp TCACATTTGTTGGCCAACAAAACCACTGAAACCGGTTaGCCATTAGGGAGACTTAACTTGGAGTCCAAATCA +
Preference number: 6 (lower is better)
Translates to: SHLLANKTTETG*PLGRLNLESKS
Trigger: TGATTTGGACTCCAAGTTAAGTCTCCCTAATGGCAAACCGGTTTCAGTGGTTTTGTTGGCCAACAAATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243662.11
ENST00000526372.1