RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB35 (Homo sapiens)

Ensembl gene IDs: ENSG00000111737

Ensembl transcript IDs: ENST00000229340.10, ENST00000534951.5, ENST00000538903.1, ENST00000540803.1, ENST00000543364.1, ENST00000544304.5

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCACCGGCACAGGAGCCCCAGGCACCGTGCATCCTCAGGGCCCGTaGCCAACCAGGACAGTCCCAAGGACGGAGACCCCGCTTCTGCTC +
Preference number: 1 (lower is better)
Translates to: PTGTGAPGTVHPQGP*PTRTVPRTETPLLL
Trigger: GAGCAGAAGCGGGGTCTCCGTCCTTGGGACTGTCCTGGTTGGCCACGGGCCCTGAGGATGCACGGTGCCTGGGGCTCCTGTGCCGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR CCA 90 bp GGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTaGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCC +
Preference number: 1 (lower is better)
Translates to: GGGTSREGRAGPTPS*HSRRAGEEVPMAPP
Trigger: GGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR TCA 90 bp GACCCTGTGCAGCGGGGACAGAGGCTGACAACCTGTCGGAGAGAATaGGCAACGCGGAGCCCACTCCACTGGCACGGGCTGGCCGCAGAC +
Preference number: 1 (lower is better)
Translates to: DPVQRGQRLTTCRRE*ATRSPLHWHGLAAD
Trigger: GTCTGCGGCCAGCCCGTGCCAGTGGAGTGGGCTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGCCTCTGTCCCCGCTGCACAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR CCA 90 bp ACGAAACTGAGACTGTCCCCCGAGGAACCTCCGTGGGCCTCGGGCTaGGGGAGGGACCGCAGTGCAGTCTCTGCAGTGGACTGGGTGCCA +
Preference number: 1 (lower is better)
Translates to: TKLRLSPEEPPWASG*GRDRSAVSAVDWVP
Trigger: TGGCACCCAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGGGGACAGTCTCAGTTTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR CCA 90 bp GTCGGAGAGAATGAGCAACGCGGAGCCCACTCCACTGGCACGGGCTaGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGACGC +
Preference number: 1 (lower is better)
Translates to: VGENEQRGAHSTGTG*PQTQLERAAVSSGR
Trigger: GCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGAGTGGGCTCCGCGTTGCTCATTCTCTCCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR GCA 90 bp AGCCCACTCCACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTaGCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SPLHWHGLAADAART*RCLLRTLLAVRWAG
Trigger: CCCAGCCCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGAGTGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR TCA 90 bp CAGGCATGCACTCCCCACAGTGCCCGAGGCTGCAGTGTAGACTCCTaGCCTCCAGTGGGAGGCAACTCGGACAAGGGTGGGAGGCCCCTT +
Preference number: 1 (lower is better)
Translates to: QACTPHSARGCSVDS*PPVGGNSDKGGRPL
Trigger: AAGGGGCCTCCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCTACACTGCAGCCTCGGGCACTGTGGGGAGTGCATGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR CCA 90 bp AACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGGCTaGGGAGGGGCGCGGGGAGGGTCTGTTGCAGCAGGCTGGCATCAA +
Preference number: 1 (lower is better)
Translates to: NVPLSPQDAACSKMG*GGARGGSVAAGWHQ
Trigger: TTGATGCCAGCCTGCTGCAACAGACCCTCCCCGCGCCCCTCCCCAGCCCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR TCA 90 bp CAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCTTaGGACCAGGTTCCCCAGCTCCCAGAATGGCTGTGGGGACAGGAC +
Preference number: 1 (lower is better)
Translates to: QRARPATSVELQGLP*DQVPQLPEWLWGQD
Trigger: GTCCTGTCCCCACAGCCATTCTGGGAGCTGGGGAACCTGGTCTCAAGGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR GCA 90 bp CGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTaGGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGG +
Preference number: 1 (lower is better)
Translates to: RGVRPGRAIYTMYRL*ESVRSAGSVLARSR
Trigger: CCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR GCA 90 bp TTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTaGCTTGAGACCAGGTTCCCCAGCTCCCAGAATGGCTGTGGGGAC +
Preference number: 1 (lower is better)
Translates to: LAKGQDLPPLWNCRA*LETRFPSSQNGCGD
Trigger: GTCCCCACAGCCATTCTGGGAGCTGGGGAACCTGGTCTCAAGGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR GCA 90 bp ACCTCCGTGGGCCTCGGGCTGGGGGAGGGACCGCAGTGCAGTCTCTaGAGTGGACTGGGTGCCATTAGCAGCAGCGTTTCTTTCGTTTAC +
Preference number: 1 (lower is better)
Translates to: TSVGLGLGEGPQCSL*SGLGAISSSVSFVY
Trigger: GTAAACGAAAGAAACGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR CCA 90 bp TTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGAACCTCCGTaGGCCTCGGGCTGGGGGAGGGACCGCAGTGCAGTCTCTGCAGTG +
Preference number: 1 (lower is better)
Translates to: LNNGTKLRLSPEEPP*ASGWGRDRSAVSAV
Trigger: CACTGCAGAGACTGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR CCA 90 bp CAGTGTAGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTaGGAGGCCCCTTCTCCGCTCCCACCAAGAAAGCCCAAGAGTCCA +
Preference number: 1 (lower is better)
Translates to: QCRLLTSSGRQLGQG*EAPSPLPPRKPKSP
Trigger: TGGACTCTTGGGCTTTCTTGGTGGGAGCGGAGAAGGGGCCTCCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCTACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR GCA 90 bp AGAAATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTaGAGGGCCTGCCTTGAGACCAGGTTCCCCAGCTCCCAGAATGGC +
Preference number: 1 (lower is better)
Translates to: RNLLAKGQDLPPLWN*RACLETRFPSSQNG
Trigger: GCCATTCTGGGAGCTGGGGAACCTGGTCTCAAGGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR GCA 90 bp CTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTaGCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTCTTTA +
Preference number: 1 (lower is better)
Translates to: LVQHLLGTRGGRGRK*RWHLPIQKHGENSL
Trigger: TAAAGAATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR GCA 90 bp AGCAGGCTGGCATCAAGAAGGCAAAAGCCAGAGCAGGACGTGGTGTaGGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGAAT +
Preference number: 1 (lower is better)
Translates to: SRLASRRQKPEQDVV*GRVEQYTLCTDSAN
Trigger: ATTCGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCTTCTTGATGCCAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR CCA 90 bp CAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATaGCACCTCCCGATACAAAAACATGGAGAGAATTCTTTAAATAAC +
Preference number: 1 (lower is better)
Translates to: QHLLGTRGGRGRKCR*HLPIQKHGENSLNN
Trigger: GTTATTTAAAGAATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR GCA 90 bp TTACTGTTCTTCGTGAGCTTCACCACATCGTTCTGTTGTTGCTGCTaGTGTTTTGCCAGGTTGTCTTTCTTTGCTCGGAGGACCAGCTCC +
Preference number: 1 (lower is better)
Translates to: LLFFVSFTTSFCCCC*CFARLSFFARRTSS
Trigger: GGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTGGCAAAACAGCAGCAGCAACAACAGAACGATGTGGTGAAGCTCACGAAGAACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR GCA 90 bp CGTTTACTGTTCTTCGTGAGCTTCACCACATCGTTCTGTTGTTGCTaGTGCTGTTTTGCCAGGTTGTCTTTCTTTGCTCGGAGGACCAGC +
Preference number: 1 (lower is better)
Translates to: RLLFFVSFTTSFCCC*CCFARLSFFARRTS
Trigger: GCTGGTCCTCCGAGCAAAGAAAGACAACCTGGCAAAACAGCAGCAGCAACAACAGAACGATGTGGTGAAGCTCACGAAGAACAGTAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR CCA 90 bp TTGGAACTGAAACCTGTTGGTGTAAATGAGAAGCCATGGCTGCCCTaGGTTTGGAGCTCAGAGGCATCTAGAAGGCAGGACAAGAAATCT +
Preference number: 1 (lower is better)
Translates to: LELKPVGVNEKPWLP*VWSSEASRRQDKKS
Trigger: AGATTTCTTGTCCTGCCTTCTAGATGCCTCTGAGCTCCAAACCCAGGGCAGCCATGGCTTCTCATTTACACCAACAGGTTTCAGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR CCA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCCCCGAGGAACCTCCGTaGGCCTCGGGCTGGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGPEEPP*ASGWGR
Trigger: CCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGG...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CCA 90 bp CGGGCTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGCCCGAGGAACCTCCGTaGGCCTCGGGCTGGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RAGPTPSWHSRRAGEEVPPEEPP*ASGWGR
Trigger: CCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGG...CGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CCA 90 bp GGAGGCCCCTTCTCCGCTCCCACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGCCCGAGGAACCTCCGTaGGCCTCGGGCTGGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GGPFSAPTKKAQESSPTMPEEPP*ASGWGR
Trigger: CCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGG...CATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTGGGAGCGGAGAAGGGGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR-3UTR CCA 90 bp CAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGGGTCCAACACCTTCTTaGCACTCGAGGAGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: QTLRISPLGGQRPRQVQAGPTPS*HSRRAG
Trigger: CCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACC...CGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CCA 90 bp GCGCGGGGAGGGTCTGTTGCAGCAGGCTGGCATCAAGAAGGCAAAAGCCAGAGCCAGGTCCAGGCGCCTTaGCCGGGGAGGAGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: ARGGSVAAGWHQEGKSQSQVQAP*PGRRGH
Trigger: GTGCCCCCTCCTCCCCGGCCAAGGCGCCTGGACCTG...GCTCTGGCTTTTGCCTTCTTGATGCCAGCCTGCTGCAACAGACCCTCCCCGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR CCA 90 bp CGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGACCGTGGGCCTCGGGCTaGGGGAGGGACCGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: RGGRGRKCRWHLPIQKHGPWASG*GRDRSA
Trigger: TGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGG...TCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CCA 90 bp GACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGCCGTGGGCCTCGGGCTaGGGGAGGGACCGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: DAARTCRCLLRTLLAVRWPWASG*GRDRSA
Trigger: TGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGG...CCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR CCA 90 bp GGAGGCCCCTTCTCCGCTCCCACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGTGCAGTAAGATGGGCTaGGGAGGGGCGCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GGPFSAPTKKAQESSPTMCSKMG*GGARGG
Trigger: CCCTCCCCGCGCCCCTCCCCAGCCCATCTTACTGCA...CATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTGGGAGCGGAGAAGGGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR-3UTR CCA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCTGCAGTAAGATGGGCTaGGGAGGGGCGCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVCSKMG*GGARGG
Trigger: CCCTCCCCGCGCCCCTCCCCAGCCCATCTTACTGCA...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR GCA 90 bp TGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGGGAGGGACCGCAGTaGAGTCTCTGCAGTGGACTG +
Preference number: 2 (lower is better)
Translates to: CTDSANQSARRAASSPGPGEGPQ*SLCSGL
Trigger: CAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCC...TGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR GCA 90 bp TGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCGGGGAGGGACCGCAGTaGAGTCTCTGCAGTGGACTG +
Preference number: 2 (lower is better)
Translates to: WSNTFLALEEGGGGSADGGEGPQ*SLCSGL
Trigger: CAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCC...GCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR GCA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCCCGCAGTGCAGTCTCTaGAGTGGACTGGGTGCCATT +
Preference number: 2 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGPQCSL*SGLGAI
Trigger: AATGGCACCCAGTCCACTGCAGAGACTGCACTGCGG...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR TCA 90 bp GCCCCAGGCACCGTGCATCCTCAGGGCCCGTGGCCAACCAGGACAGTCCCAAGGGTCATCAAGTGCAGATaGCCCTGGTTGTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: APGTVHPQGPWPTRTVPRVIKCR*PWLFSR
Trigger: CCTGGAGAACAACCAGGGTCATCTGCACTTGATGAC...CCTTGGGACTGTCCTGGTTGGCCACGGGCCCTGAGGATGCACGGTGCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR-3UTR GCA 90 bp TGGGGGTCGGGGAGCAGTCATCAAGTGCAGATGACCCTGGTTGTTCTCCAGGGCGGGCGGGGGAGGAAGTaGCGATGGCACCTCCCGATA +
Preference number: 2 (lower is better)
Translates to: WGSGSSHQVQMTLVVLQGGRGRK*RWHLPI
Trigger: TATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC...GCCCTGGAGAACAACCAGGGTCATCTGCACTTGATGACTGCTCCCCGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR CAA 90 bp CCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCTaGAGACCAGGTTCCCCAGCTCCCAGAATGGCTGTGGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: PKGKTCHLCGTAGPA*RPGSPAPRMAVGTG
Trigger: TCCTGTCCCCACAGCCATTCTGGGAGCTGGGGAACCTGGTCTCAAGGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR TCA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCACCTGTCGGAGAGAATaGGCAACGCGGAGCCCACTC +
Preference number: 2 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVTCRRE*ATRSPL
Trigger: GAGTGGGCTCCGCGTTGCTCATTCTCTCCGACAGGT...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR GCA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCGACGCAGCTAGAACGTaGCGCTGTCTCCTCAGGACG +
Preference number: 2 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVDAART*RCLLRT
Trigger: CGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTC...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR TCA 90 bp CCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTATAACGGCACGAAACTaGGACTGTCCCCCGAGGAAC +
Preference number: 2 (lower is better)
Translates to: PTPSWHSRRAGEEVPMAPITARN*DCPPRN
Trigger: GTTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTAT...AGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR TCA 90 bp TGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAATAACGGCACGAAACTaGGACTGTCCCCCGAGGAAC +
Preference number: 2 (lower is better)
Translates to: CTDSANQSARRAASSPGPITARN*DCPPRN
Trigger: GTTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTAT...TGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR TCA 90 bp ACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGGCTGGGGAGGGGATAACGGCACGAAACTaGGACTGTCCCCCGAGGAAC +
Preference number: 2 (lower is better)
Translates to: TCRCLLRTLLAVRWAGEGITARN*DCPPRN
Trigger: GTTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTAT...CCCCTCCCCAGCCCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR GCA 90 bp ATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCTGCCAGCCCCATCTCTaGACGAACCTACCCCGACCT +
Preference number: 2 (lower is better)
Translates to: ICWPKGKTCHLCGTAGPACQPHL*TNLPRP
Trigger: AGGTCGGGGTAGGTTCGTGCAGAGATGGGGCTGGCA...GGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR GCA 90 bp TCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGCCGCAGTGCAGTCTCTaGAGTGGACTGGGTGCCATT +
Preference number: 2 (lower is better)
Translates to: SRRAGEEVPMAPPDTKTWPQCSL*SGLGAI
Trigger: AATGGCACCCAGTCCACTGCAGAGACTGCACTGCGG...CCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CCA 90 bp AGGCAAAAGCCAGAGCAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTACTGCTTGCAGTAAGATaGGCTGGGGAGGGGCGCGGG +
Preference number: 2 (lower is better)
Translates to: RQKPEQDVVCGRVEQYTLLLAVR*AGEGRG
Trigger: CCCGCGCCCCTCCCCAGCCCATCTTACTGCAAGCAG...TAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR TCA 90 bp GGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAAACATCTCTTCCACGTTaGCATTCTCCTTGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: GTRGGRGRKCRWHLPIQKTSLPR*HSPWRW
Trigger: CCAGCGCCAAGGAGAATGTCAACGTGGAAGAGATGT...TTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR-3UTR GCA 90 bp GCGCGGGGAGGGTCTGTTGCAGCAGGCTGGCATCAAGAAGGCAAAAGCCAGAGCACATCGTTCTGTTGTTaGTGCTGCTGTTTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: ARGGSVAAGWHQEGKSQSTSFCC*CCCFAR
Trigger: CCTGGCAAAACAGCAGCAGCAACAACAGAACGATGT...GCTCTGGCTTTTGCCTTCTTGATGCCAGCCTGCTGCAACAGACCCTCCCCGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR-3UTR CCA 90 bp ATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCGGGAGGAAGTGCCGATaGCACCTCCCGATACAAAAA +
Preference number: 2 (lower is better)
Translates to: IHYVQTLRISPLGGQRPRGRKCR*HLPIQK
Trigger: TTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCC...GCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CCA 90 bp CTTTGCTCGGAGGACCAGCTCCGTGATGCAGTTGAACATCTCTTCCACGTTGACCTGGTCTCGAACAACTaGATGCCCATCTGCCCGGCG +
Preference number: 2 (lower is better)
Translates to: LCSEDQLRDAVEHLFHVDLVSNN*MPICPA
Trigger: CGCCGGGCAGATGGGCATCCAGTTGTTCGAGACCAG...GTCAACGTGGAAGAGATGTTCAACTGCATCACGGAGCTGGTCCTCCGAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR-3UTR GCA 90 bp CATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGAAGGGCGGGGGAGGAAGTaGCGATGGCACCTCCCGATA +
Preference number: 2 (lower is better)
Translates to: HGENSLNNGTKLRLSPEEGRGRK*RWHLPI
Trigger: TATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC...TTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR GCA 90 bp AGGCAAAAGCCAGAGCAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTAACTATGTACAGACTCTaGGAATCAGTCCGCTCGGCG +
Preference number: 2 (lower is better)
Translates to: RQKPEQDVVCGRVEQYTLTMYRL*ESVRSA
Trigger: CGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGT...TAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR GCA 90 bp CCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAACCTGTTGGTGAGCAGGACGTGGTGTaGGGCCGGGTAGAGCAATAT +
Preference number: 2 (lower is better)
Translates to: PSLHEPTPTFLLELKPVGEQDVV*GRVEQY
Trigger: ATATTGCTCTACCCGGCCGCACACCACGTCCTGCTC...ACCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR TCA 90 bp CACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGGCAGGAAGCCATTCATTTTTACCTGTTGGTGTAAATaGGAAGCCATGGCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: HQESPRVQPHNGRKPFIFTCWCK*EAMAAL
Trigger: CAGGGCAGCCATGGCTTCTCATTTACACCAACAGGT...AAAAATGAATGGCTTCCTGCCATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR-3UTR GCA 90 bp CAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTTCTGTTGTTGCTGCTaGTGTTTTGCCAGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: QYTLCTDSANQSARRAASFCCCC*CFARLS
Trigger: AGACAACCTGGCAAAACAGCAGCAGCAACAACAGAA...GGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR-3UTR CCA 90 bp CATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGAAGTCTCTGCAGTGGACTaGGTGCCATTAGCAGCAGCG +
Preference number: 2 (lower is better)
Translates to: HGENSLNNGTKLRLSPEEVSAVD*VPLAAA
Trigger: CGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGAC...TTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR GCA 90 bp GGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTCTTTATCTCGAACAACTGGATaGCCATCTGCCCGGCGAATT +
Preference number: 2 (lower is better)
Translates to: GRKCRWHLPIQKHGENSLSRTTG*PSARRI
Trigger: AATTCGCCGGGCAGATGGGCATCCAGTTGTTCGAGA...TAAAGAATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR CCA 72 bp AGACTGTCCCCCGAGGAACCTCCGTGGGCCTCGGGCTaGGGGAGGGACCGCAGTGCAGTCTCTGCAGTGGAC +
Preference number: 3 (lower is better)
Translates to: RLSPEEPPWASG*GRDRSAVSAVD
Trigger: GTCCACTGCAGAGACTGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGGGGACAGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR CCA 72 bp AATGAGCAACGCGGAGCCCACTCCACTGGCACGGGCTaGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: NEQRGAHSTGTG*PQTQLERAAVS
Trigger: GGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGAGTGGGCTCCGCGTTGCTCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR CAA 90 bp GGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACTGGTCCAACACCTTCTaGGCACTCGAGGAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: GGGGTSREGRAGPTPSWHWSNTF*ALEEGG
Trigger: CCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCA...GTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR TCA 72 bp CAGCGGGGACAGAGGCTGACAACCTGTCGGAGAGAATaGGCAACGCGGAGCCCACTCCACTGGCACGGGCTG +
Preference number: 3 (lower is better)
Translates to: QRGQRLTTCRRE*ATRSPLHWHGL
Trigger: CAGCCCGTGCCAGTGGAGTGGGCTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGCCTCTGTCCCCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR CCA 72 bp ACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTaGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATG +
Preference number: 3 (lower is better)
Translates to: TSREGRAGPTPS*HSRRAGEEVPM
Trigger: CATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR CCA 72 bp CTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTaGGAGGCCCCTTCTCCGCTCCCACCAAGAAAGCCC +
Preference number: 3 (lower is better)
Translates to: LLTSSGRQLGQG*EAPSPLPPRKP
Trigger: GGGCTTTCTTGGTGGGAGCGGAGAAGGGGCCTCCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR-3UTR CAA 90 bp GGAGGCCCCTTCTCCGCTCCCACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGCGCGGGGAGGGTCTGTaGCAGCAGGCTGGCATCAAG +
Preference number: 3 (lower is better)
Translates to: GGPFSAPTKKAQESSPTMRGEGL*QQAGIK
Trigger: CTTGATGCCAGCCTGCTGCAACAGACCCTCCCCGCG...CATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTGGGAGCGGAGAAGGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR TCA 72 bp ACTCCCCACAGTGCCCGAGGCTGCAGTGTAGACTCCTaGCCTCCAGTGGGAGGCAACTCGGACAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: TPHSARGCSVDS*PPVGGNSDKGG
Trigger: CCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCTACACTGCAGCCTCGGGCACTGTGGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR GCA 72 bp CACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTaGCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGA +
Preference number: 3 (lower is better)
Translates to: HWHGLAADAART*RCLLRTLLAVR
Trigger: TCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR CAA 90 bp ACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGGCTGGGGAGGGGCCAGGTTGTCTTTCTTaGCTCGGAGGACCAGCTCCG +
Preference number: 3 (lower is better)
Translates to: TCRCLLRTLLAVRWAGEGPGCLS*LGGPAP
Trigger: CGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTGG...CCCCTCCCCAGCCCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR TCA 72 bp AGAAGGGGCAAGACCCTGTGCAGCGGGGACAGAGGCTaGCAACCTGTCGGAGAGAATGAGCAACGCGGAGCC +
Preference number: 3 (lower is better)
Translates to: RRGKTLCSGDRG*QPVGENEQRGA
Trigger: GGCTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGCCTCTGTCCCCGCTGCACAGGGTCTTGCCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR GCA 72 bp CGGCCGGGTAGAGCAATATACACTATGTACAGACTCTaGGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCC +
Preference number: 3 (lower is better)
Translates to: RPGRAIYTMYRL*ESVRSAGSVLA
Trigger: GGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CAA 90 bp GGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACAACATCTCTTCCACGTaGACATTCTCCTTGGCGCTG +
Preference number: 3 (lower is better)
Translates to: GGGGTSREGRAGPTPSWHNISST*TFSLAL
Trigger: CAGCGCCAAGGAGAATGTCAACGTGGAAGAGATGTT...GTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR GCA 72 bp CACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTaGCGATGGCACCTCCCGATACAAAAACATGGAGAG +
Preference number: 3 (lower is better)
Translates to: HLLGTRGGRGRK*RWHLPIQKHGE
Trigger: CTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR CCA 72 bp AATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTaGAACTGCAGGGCCTGCCTTGAGACCAGGTTCCCC +
Preference number: 3 (lower is better)
Translates to: NLLAKGQDLPPL*NCRACLETRFP
Trigger: GGGGAACCTGGTCTCAAGGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR CCA 72 bp CCCTCTTATTGCTTGAATTTGCAAGCACACCCTCGCTaGCCTCGCCTGATCGCTCAGAGGCCAGCATGCCCC +
Preference number: 3 (lower is better)
Translates to: PSYCLNLQAHPR*PRLIAQRPACP
Trigger: GGGGCATGCTGGCCTCTGAGCGATCAGGCGAGGCCAGCGAGGGTGTGCTTGCAAATTCAAGCAATAAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR-3UTR CAA 90 bp GCAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCTGGTCCAACACCTTCTaGGCACTCGAGGAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: AIYTMYRLCESVRSAGSVWSNTF*ALEEGG
Trigger: CCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCA...GACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CAA 90 bp AGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTGGGAGGCCCCTTCTGGGTGGCCTCAACTTTaGCTGCTGTGCCAATCAAAC +
Preference number: 3 (lower is better)
Translates to: RLLTSSGRQLGQGWEAPSGWPQL*LLCQSN
Trigger: GTTTGATTGGCACAGCAGCAAAAGTTGAGGCCACCC...AGAAGGGGCCTCCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
3UTR-3UTR CAA 90 bp GGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGAATGGTCCAACACCTTCTaGGCACTCGAGGAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: GRGVRPGRAIYTMYRLCEWSNTF*ALEEGG
Trigger: CCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCA...TTCGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CAA 90 bp GGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAAAGCTCCGTGATGCAGTaGAACATCTCTTCCACGTTG +
Preference number: 3 (lower is better)
Translates to: GTRGGRGRKCRWHLPIQKSSVMQ*NISSTL
Trigger: CAACGTGGAAGAGATGTTCAACTGCATCACGGAGCT...TTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR-3UTR CAA 90 bp GCTGACAACCTGTCGGAGAGAATGAGCAACGCGGAGCCCACTCCACTGGCACGGCACATCGTTCTGTTGTaGCTGCTGCTGTTTTGCCAG +
Preference number: 3 (lower is better)
Translates to: ADNLSERMSNAEPTPLARHIVLL*LLLFCQ
Trigger: CTGGCAAAACAGCAGCAGCAACAACAGAACGATGTG...CCGTGCCAGTGGAGTGGGCTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR CCA 72 bp CTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATaGCACCTCCCGATACAAAAACATGGAGAGAATTCT +
Preference number: 3 (lower is better)
Translates to: LGTRGGRGRKCR*HLPIQKHGENS
Trigger: AGAATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
3UTR-3UTR CAA 90 bp CTGCCAGCCCCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAAACCCCGACCTTTCTGTaGGAACTGAAACCTGTTGGT +
Preference number: 3 (lower is better)
Translates to: LPAPSLHEPTPTFLLELKTPTFL*ELKPVG
Trigger: ACCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGT...TTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGGGGCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR GCA 72 bp GCATCAAGAAGGCAAAAGCCAGAGCAGGACGTGGTGTaGGGCCGGGTAGAGCAATATACACTATGTACAGAC +
Preference number: 3 (lower is better)
Translates to: ASRRQKPEQDVV*GRVEQYTLCTD
Trigger: GTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCTTCTTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR CAA 90 bp GCAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCGTTGCTGCTGCTGTTTaGCCAGGTTGTCTTTCTTTG +
Preference number: 3 (lower is better)
Translates to: AIYTMYRLCESVRSAGSVVAAAV*PGCLSL
Trigger: CAAAGAAAGACAACCTGGCAAAACAGCAGCAGCAAC...GACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR CCA 72 bp GTTGGTGTAAATGAGAAGCCATGGCTGCCCTGGGTTTaGAGCTCAGAGGCATCTAGAAGGCAGGACAAGAAA +
Preference number: 3 (lower is better)
Translates to: VGVNEKPWLPWV*SSEASRRQDKK
Trigger: TTTCTTGTCCTGCCTTCTAGATGCCTCTGAGCTCCAAACCCAGGGCAGCCATGGCTTCTCATTTACACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR CAA 90 bp CCGACCTTTCTGTTGGAACTGAAACCTGTTGGTGTAAATGAGAAGCCATGGCTGACGTTGACATTCTCCTaGGCGCTGGTCTCGAACAAC +
Preference number: 3 (lower is better)
Translates to: PTFLLELKPVGVNEKPWLTLTFS*ALVSNN
Trigger: GTTGTTCGAGACCAGCGCCAAGGAGAATGTCAACGT...CAGCCATGGCTTCTCATTTACACCAACAGGTTTCAGTTCCAACAGAAAGGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR CCA 72 bp TTGGAACTGAAACCTGTTGGTGTAAATGAGAAGCCATaGCTGCCCTGGGTTTGGAGCTCAGAGGCATCTAGA +
Preference number: 3 (lower is better)
Translates to: LELKPVGVNEKP*LPWVWSSEASR
Trigger: TCTAGATGCCTCTGAGCTCCAAACCCAGGGCAGCCATGGCTTCTCATTTACACCAACAGGTTTCAGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR-3UTR CAA 90 bp CCGACCTTTCTGTTGGAACTGAAACCTGTTGGTGTAAATGAGAAGCCATGGCTGTGCTGTTTTGCCAGGTaGTCTTTCTTTGCTCGGAGG +
Preference number: 3 (lower is better)
Translates to: PTFLLELKPVGVNEKPWLCCFAR*SFFARR
Trigger: CCTCCGAGCAAAGAAAGACAACCTGGCAAAACAGCA...CAGCCATGGCTTCTCATTTACACCAACAGGTTTCAGTTCCAACAGAAAGGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
3UTR TCA 72 bp ATTAGCAGCAGCGTTTCTTTCGTTTACTGTTCTTCGTaGGCTTCACCACATCGTTCTGTTGTTGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: ISSSVSFVYCSS*ASPHRSVVAAA
Trigger: AGCAGCAGCAACAACAGAACGATGTGGTGAAGCTCACGAAGAACAGTAAACGAAAGAAACGCTGCTGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR TCA 90 bp CACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGGTCGCGCACGCGCCCTaGCGGAGTCCCAGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: HWHGLAADAARTCRCLLRVAHAP*RSPSKR
Trigger: GCGCTTGCTGGGACTCCGTCAGGGCGCGTGCGCGAC...CCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCCAGGTCCAGGCGCCTTaGCCGGGGAGGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGQVQAP*PGRRGH
Trigger: GTGCCCCCTCCTCCCCGGCCAAGGCGCCTGGACCTG...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCCAGCTCCCTTCGGGCTaGTCCGGCAGCGGCGGATCC +
Preference number: 4 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGQLPSG*SGSGGS
Trigger: GGATCCGCCGCTGCCGGAGCAGCCCGAAGGGAGCTG...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp CGGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGGCTCAGAGGCCAGCATaGCCCCCGCCCACCGGCACA +
Preference number: 4 (lower is better)
Translates to: RGGGGTSREGRAGPTPSWAQRPA*PPPTGT
Trigger: TGTGCCGGTGGGCGGGGGGCATGCTGGCCTCTGAGC...CCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp CGGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGGGGCGGGGTCGGTACTaGCCTCGCGATCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGGGGTSREGRAGPTPSWGRGRY*PRDPQL
Trigger: GAGCTGCGGATCGCGAGGCCAGTACCGACCCCGCCC...CCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp ACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCCCGTGGGCCTCGGGCTaGGGGAGGGACCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: TPSWHSRRAGEEVPMAPPPWASG*GRDRSA
Trigger: TGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGG...GGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp CCACTCCACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCGGAGCCCACTCCACTaGCACGGGCTGGCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: PLHWHGLAADAARTCRCLRSPLH*HGLAAD
Trigger: GTCTGCGGCCAGCCCGTGCCAGTGGAGTGGGCTCCG...GAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGAGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGAGGAACCTCCGTaGGCCTCGGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PTPSWHSRRAGEEVPMAPPEEPP*ASGWGR
Trigger: CCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGG...AGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp TGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCACAGGTCCAGGCGCCTTaGCCGGGGAGGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: CTDSANQSARRAASSPGPQVQAP*PGRRGH
Trigger: GTGCCCCCTCCTCCCCGGCCAAGGCGCCTGGACCTG...TGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp CACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGTGCAGTAAGATGGGCTaGGGAGGGGCGCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HWHGLAADAARTCRCLLRCSKMG*GGARGG
Trigger: CCCTCCCCGCGCCCCTCCCCAGCCCATCTTACTGCA...CCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCGTGGAGGGGAGGGAGTaGTCCAGCTCCGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGVEGRE*SSSEPS
Trigger: GCTCGGCTCGGAGCTGGACCACTCCCTCCCCTCCAC...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp AGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCGGGGAGGGACCGCAGTaGAGTCTCTGCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: RLCESVRSAGSVLARSRRGEGPQ*SLCSGL
Trigger: CAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCC...GCGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp CACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGGGGCGGGGGAGGAAGTaGCGATGGCACCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: HWHGLAADAARTCRCLLRGRGRK*RWHLPI
Trigger: TATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC...CCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTGGGCGGGGTCGGTACTaGCCTCGCGATCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PTPSWHSRRAGEEVPMAPGRGRY*PRDPQL
Trigger: GAGCTGCGGATCGCGAGGCCAGTACCGACCCCGCCC...AGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp AGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCCCCAATACCTGGGGCTaGTGTCCAGCTGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLCESVRSAGSVLARSRRPNTWG*CPAARS
Trigger: GCTTCTGGCAGCTGGACATCAGCCCCAGGTATTGGG...GCGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp ACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGGCTGGGGAGGGGCGAGGAGGTGGCCTTTaGGGGCAGCGCGGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: TCRCLLRTLLAVRWAGEGRGGGL*GQRGVE
Trigger: TTCGACCCCGCGCTGCCCTCAAAGGCCACCTCCTCG...CCCCTCCCCAGCCCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp CGGGCTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGGGGGAGGGACCGCAGTaGAGTCTCTGCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: RAGPTPSWHSRRAGEEVPGEGPQ*SLCSGL
Trigger: CAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCC...CGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp AGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCTGCCAGCCCCATCTCTaGACGAACCTACCCCGACCT +
Preference number: 4 (lower is better)
Translates to: RLCESVRSAGSVLARSRRCQPHL*TNLPRP
Trigger: AGGTCGGGGTAGGTTCGTGCAGAGATGGGGCTGGCA...GCGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGCCGTGGGCCTCGGGCTaGGGGAGGGACCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LEEGGGGSADGTSRYKNMPWASG*GRDRSA
Trigger: TGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGG...CATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp CGGGCTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGGGTCCAACACCTTCTTaGCACTCGAGGAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RAGPTPSWHSRRAGEEVPGPTPS*HSRRAG
Trigger: CCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACC...CGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp TACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCCAGGTCCAGGCGCCTTaGCCGGGGAGGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: YTMYRLCESVRSAGSVLAQVQAP*PGRRGH
Trigger: GTGCCCCCTCCTCCCCGGCCAAGGCGCCTGGACCTG...GGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCGGAGCCCACTCCACTaGCACGGGCTGGCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVRSPLH*HGLAAD
Trigger: GTCTGCGGCCAGCCCGTGCCAGTGGAGTGGGCTCCG...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CGGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCCCCACCCCATCCCGTaGCTCCAAAGTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGGGGTSREGRAGPTPSWPHPIP*LQSEGL
Trigger: CAGGCCTTCACTTTGGAGCCACGGGATGGGGTGGGG...CCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp AGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCCCGCAGTGCAGTCTCTaGAGTGGACTGGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: RLCESVRSAGSVLARSRRPQCSL*SGLGAI
Trigger: AATGGCACCCAGTCCACTGCAGAGACTGCACTGCGG...GCGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp ACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGGGGAGGGACCGCAGTaGAGTCTCTGCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: TPSWHSRRAGEEVPMAPPGEGPQ*SLCSGL
Trigger: CAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCC...GGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp GAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACTGGGCGGGGGAGGAAGTaGCGATGGCACCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: EEGAPVGKGGLVQHLLGTGRGRK*RWHLPI
Trigger: TATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC...AGTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp AGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCCCTCAGGACGCTGCTTaGAGTAAGATGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLCESVRSAGSVLARSRRPQDAA*SKMGWG
Trigger: TCCCCAGCCCATCTTACTGCAAGCAGCGTCCTGAGG...GCGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp CACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGGACGCAGCTAGAACGTaGCGCTGTCTCCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: HWHGLAADAARTCRCLLRDAART*RCLLRT
Trigger: CGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTC...CCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCTGCCAGCCCCATCTCTaGACGAACCTACCCCGACCT +
Preference number: 4 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGCQPHL*TNLPRP
Trigger: AGGTCGGGGTAGGTTCGTGCAGAGATGGGGCTGGCA...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp ATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCGAGCCCCAGGCACCGTaGATCCTCAGGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: ICWPKGKTCHLCGTAGPAEPQAP*ILRARG
Trigger: GCCACGGGCCCTGAGGATGCACGGTGCCTGGGGCTC...GGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp AGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCGTCTCTGCAGTGGACTaGGTGCCATTAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLCESVRSAGSVLARSRRVSAVD*VPLAAA
Trigger: CGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGAC...GCGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp GACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGCCCGAGGAACCTCCGTaGGCCTCGGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: DAARTCRCLLRTLLAVRWPEEPP*ASGWGR
Trigger: CCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGG...CCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp GGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACTCCACTGGCACGGGCTaGCCGCAGACGCAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: GGGGTSREGRAGPTPSWHSTGTG*PQTQLE
Trigger: TTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGA...GTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp CAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCCACTCCGATCGTGGTaGTGTAGCTGCCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QTLRISPLGGQRPRQVQAPLRSW*CSCLRK
Trigger: CTTTCTCAGGCAGCTACATCACCACGATCGGAGTGG...CGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp CGGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGAGCGGGGACAGAGGCTaGCAACCTGTCGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: RGGGGTSREGRAGPTPSWSGDRG*QPVGEN
Trigger: ATTCTCTCCGACAGGTTGTCAGCCTCTGTCCCCGCT...CCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp AGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCCCAAAGGGCAAGACCTaGCACCTCTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: RLCESVRSAGSVLARSRRPKGKT*HLCGTA
Trigger: TGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGG...GCGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp GCTCCCACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGGCAGGAAGCCATTCACCCGAGGAACCTCCGTaGGCCTCGGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: APTKKAQESSPTMAGSHSPEEPP*ASGWGR
Trigger: CCTCCCCCAGCCCGAGGCCCACGGAGGTTCCTCGGG...TGAATGGCTTCCTGCCATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp ATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCCAACTCGGACAAGGGTaGGAGGCCCCTTCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: MYRLCESVRSAGSVLARSQLGQG*EAPSPL
Trigger: GAGCGGAGAAGGGGCCTCCCACCCTTGTCCGAGTTG...GGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp CGGGCTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGCCACTCCGATCGTGGTaGTGTAGCTGCCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RAGPTPSWHSRRAGEEVPPLRSW*CSCLRK
Trigger: CTTTCTCAGGCAGCTACATCACCACGATCGGAGTGG...CGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp ATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCCGTCGTAAACCACAATaGCCCCGTGGGTCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: MYRLCESVRSAGSVLARSRRKPQ*PRGSPD
Trigger: ATCGGGGGACCCACGGGGTCATTGTGGTTTACGACG...GGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp TGGGGGTCGGGGAGCAGTCATCAAGTGCAGATGACCCTGGTTGTTCTCCAGGGCGTAGTGGGAGGGGAATaGGGTGTCCGGGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: WGSGSSHQVQMTLVVLQGVVGGE*GVRAGG
Trigger: ACCCCCAGCCCGGACACCTCATTCCCCTCCCACTAC...GCCCTGGAGAACAACCAGGGTCATCTGCACTTGATGACTGCTCCCCGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp TGGGGGTCGGGGAGCAGTCATCAAGTGCAGATGACCCTGGTTGTTCTCCAGGGCCTCGCTGGCCTCGCCTaGTCGCTCAGAGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WGSGSSHQVQMTLVVLQGLAGLA*SLRGQH
Trigger: ATGCTGGCCTCTGAGCGATCAGGCGAGGCCAGCGAG...GCCCTGGAGAACAACCAGGGTCATCTGCACTTGATGACTGCTCCCCGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp TGTGCAGCGGGGACAGAGGCTGACAACCTGTCGGAGAGAATGAGCAACGCGGAGCCTGCGGAGAGGAAATaGCAGGCACGCCGCGACCGT +
Preference number: 4 (lower is better)
Translates to: CAAGTEADNLSERMSNAEPAERK*QARRDR
Trigger: ACGGTCGCGGCGTGCCTGTCATTTCCTCTCCGCAGG...CTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGCCTCTGTCCCCGCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp CAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGTCTCGAACAACTGGATaGCCATCTGCCCGGCGAATT +
Preference number: 4 (lower is better)
Translates to: QTLRISPLGGQRPRQVQASRTTG*PSARRI
Trigger: AATTCGCCGGGCAGATGGGCATCCAGTTGTTCGAGA...CGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp CTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGGGCGGGGGAGGAAGTaGCGATGGCACCTCCCGATA +
Preference number: 4 (lower is better)
Translates to: LEEGGGGSADGTSRYKNMGRGRK*RWHLPI
Trigger: TATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC...CATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCTCTTGGAGCCCACATTaGCTCTTTGGTGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGSWSPH*LFGGGE
Trigger: CTCCCCTCCACCAAAGAGGCAATGTGGGCTCCAAGA...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp GGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAATCCACTGGCACGGGCTaGCCGCAGACGCAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: GTRGGRGRKCRWHLPIQKSTGTG*PQTQLE
Trigger: TTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGA...TTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp ATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCGACCTGCCACCTCTGTaGAACTGCAGGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: MYRLCESVRSAGSVLARSDLPPL*NCRACL
Trigger: AAGGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTC...GGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CGGGCTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGTGGCTGCCCTGGGTTTaGAGCTCAGAGGCATCTAGA +
Preference number: 4 (lower is better)
Translates to: RAGPTPSWHSRRAGEEVPWLPWV*SSEASR
Trigger: TCTAGATGCCTCTGAGCTCCAAACCCAGGGCAGCCA...CGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp TCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGCTGCGAGGAGGTaGCCTTTGAGGGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: SRRAGEEVPMAPPDTKTWRAARR*PLRAAR
Trigger: CCGCGCTGCCCTCAAAGGCCACCTCCTCGCAGCTCT...CCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp TCCACGTTGACATTCTCCTTGGCGCTGGTCTCGAACAACTGGATGCCCATCTGCCGCAGGCGCAGCGTCTaGCACCGCCTTGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: STLTFSLALVSNNWMPICRRRSV*HRLAQP
Trigger: CGGCTGCGCAAGGCGGTGCCAGACGCTGCGCCTGCG...GCAGATGGGCATCCAGTTGTTCGAGACCAGCGCCAAGGAGAATGTCAACGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR TCA 90 bp GAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACTCCACGGTCCGGATCTTaGAATCCACTCCGATCGTGG +
Preference number: 4 (lower is better)
Translates to: EEGAPVGKGGLVQHLLGTPRSGS*NPLRSW
Trigger: CCACGATCGGAGTGGATTTCAAGATCCGGACCGTGG...AGTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp ATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCCCACGGTCCGGATCTTaGAATCCACTCCGATCGTGG +
Preference number: 4 (lower is better)
Translates to: MYRLCESVRSAGSVLARSPRSGS*NPLRSW
Trigger: CCACGATCGGAGTGGATTTCAAGATCCGGACCGTGG...GGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp ATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCTCACCTTCTCCCCGTTaGTCTCCACGGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: MYRLCESVRSAGSVLARSSPSPR*SPRSGS
Trigger: AGATCCGGACCGTGGAGATCAACGGGGAGAAGGTGA...GGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp ACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCATAACGGCACGAAACTaGGACTGTCCCCCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TPSWHSRRAGEEVPMAPPITARN*DCPPRN
Trigger: GTTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTAT...GGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp GAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACTAGCGGGGACAGAGGCTaGCAACCTGTCGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: EEGAPVGKGGLVQHLLGTSGDRG*QPVGEN
Trigger: ATTCTCTCCGACAGGTTGTCAGCCTCTGTCCCCGCT...AGTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp CCACTCCACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCACCTGTTGGTGTAAATaGGAAGCCATGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLHWHGLAADAARTCRCLTCWCK*EAMAAL
Trigger: CAGGGCAGCCATGGCTTCTCATTTACACCAACAGGT...GAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp GGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGAACGCCACCCTGGGCGCTaGGAGCTTGCGGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GRGVRPGRAIYTMYRLCERHPGR*ELAEPS
Trigger: GCTCGGCTCCGCAAGCTCTCAGCGCCCAGGGTGGCG...TTCGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp GCTGGTCTCGAACAACTGGATGCCCATCTGCCCGGCGAATTTGTAGGCATCTTCCAGCTCCCTTCGGGCTaGTCCGGCAGCGGCGGATCC +
Preference number: 4 (lower is better)
Translates to: AGLEQLDAHLPGEFVGIFQLPSG*SGSGGS
Trigger: GGATCCGCCGCTGCCGGAGCAGCCCGAAGGGAGCTG...GAAGATGCCTACAAATTCGCCGGGCAGATGGGCATCCAGTTGTTCGAGACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp CCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTGAGCAGGACGTGGTGTaGGGCCGGGTAGAGCAATAT +
Preference number: 4 (lower is better)
Translates to: PTPSWHSRRAGEEVPMAPEQDVV*GRVEQY
Trigger: ATATTGCTCTACCCGGCCGCACACCACGTCCTGCTC...AGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp AGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTGGGAGGCCCCTTCTGACGCAGCTAGAACGTaGCGCTGTCTCCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: RLLTSSGRQLGQGWEAPSDAART*RCLLRT
Trigger: CGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTC...AGAAGGGGCCTCCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp ATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCGGCGGGAGCAGAGCTaGGAGGAGGTGGCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: IHYVQTLRISPLGGQRPRRREQS*EEVAFE
Trigger: CTCAAAGGCCACCTCCTCGCAGCTCTGCTCCCGCCG...GCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp GCTGACAACCTGTCGGAGAGAATGAGCAACGCGGAGCCCACTCCACTGGCACGGCTGGTCTCGAACAACTaGATGCCCATCTGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: ADNLSERMSNAEPTPLARLVSNN*MPICPA
Trigger: CGCCGGGCAGATGGGCATCCAGTTGTTCGAGACCAG...CCGTGCCAGTGGAGTGGGCTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp GCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTACTGGTCTCGAACAACTaGATGCCCATCTGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: AADAARTCRCLLRTLLAVLVSNN*MPICPA
Trigger: CGCCGGGCAGATGGGCATCCAGTTGTTCGAGACCAG...TACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp GCTCCCACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGGCAGGAAGCCATTCATGCAGTAAGATGGGCTaGGGAGGGGCGCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: APTKKAQESSPTMAGSHSCSKMG*GGARGG
Trigger: CCCTCCCCGCGCCCCTCCCCAGCCCATCTTACTGCA...TGAATGGCTTCCTGCCATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp TGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCATGTTCTCCAGGGCACTaGGGCGTGTCAAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: CTDSANQSARRAASSPGPCSPGH*GVSKLA
Trigger: GGCCAGTTTTGACACGCCCCAGTGCCCTGGAGAACA...TGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp ATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCGCTTCTAGCCTGGGCTaGAAGCCCCCAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: IHYVQTLRISPLGGQRPRASSLG*KPPGTP
Trigger: GGGGGTTCCTGGGGGCTTCCAGCCCAGGCTAGAAGC...GCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp GCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTATCACCTTCTCCCCGTTaGTCTCCACGGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: AADAARTCRCLLRTLLAVSPSPR*SPRSGS
Trigger: AGATCCGGACCGTGGAGATCAACGGGGAGAAGGTGA...TACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTCTGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp CAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCGATAATACGTGGAGGTaGTGGTGCGGAAGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QHLLGTRGGRGRKCRWHLDNTWR*WCGSAP
Trigger: AGGAGCGCTTCCGCACCATCACCTCCACGTATTATC...GAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCCATCACAGTTCTGGTTaGTTTCGTGAAGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGHHSSG*FREATA
Trigger: AGCGGTGGCTTCACGAAATCAACCAGAACTGTGATG...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp GGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACCTTCCACTCGATCCCTaGCCTTTTCCTTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGGGTSREGRAGPTPSWHLPLDP*PFPSSL
Trigger: CAAGGACGAAGGAAAAGGTCAGGGATCGAGTGGAAG...GTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp CAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGACATCGTTCTGTTGTTaGTGCTGCTGTTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QTLRISPLGGQRPRQVQATSFCC*CCCFAR
Trigger: CCTGGCAAAACAGCAGCAGCAACAACAGAACGATGT...CGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp CTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCGCAGTGCAGTCTCTaGAGTGGACTGGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: LCTDSANQSARRAASSPGPQCSL*SGLGAI
Trigger: AATGGCACCCAGTCCACTGCAGAGACTGCACTGCGG...ACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp TGGGGGAGGGACCGCAGTGCAGTCTCTGCAGTGGACTGGGTGCCATTAGCAGCACCGCAGTGCAGTCTCTaGAGTGGACTGGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: WGRDRSAVSAVDWVPLAAPQCSL*SGLGAI
Trigger: AATGGCACCCAGTCCACTGCAGAGACTGCACTGCGG...TGCTGCTAATGGCACCCAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp ATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCGGGCTGATGTCCAGCTaGCAGAAGCCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: ICWPKGKTCHLCGTAGPAGLMSS*QKPWGL
Trigger: AAGCCCCCATGGCTTCTGGCAGCTGGACATCAGCCC...GGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp AGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAACTGCTTGCAGTAAGATaGGCTGGGGAGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: RAGEEVPMAPPDTKTWRELLAVR*AGEGRG
Trigger: CCCGCGCCCCTCCCCAGCCCATCTTACTGCAAGCAG...TTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGGGGAGGGAAGGGAGCTaGCACAGGCCCCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QDVVCGRVEQYTLCTDSAGREGS*HRPRRR
Trigger: CCTTCTCCGGGGCCTGTGCCAGCTCCCTTCCCTCCC...CGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCACTCCTGACCTCCAGTaGGAGGCAACTCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVTPDLQ*EATRTR
Trigger: CCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGT...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp GCTGGTCTCGAACAACTGGATGCCCATCTGCCCGGCGAATTTGTAGGCATCTTCTCGTCGCCGCCACCCTaGGCGCTGAGAGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: AGLEQLDAHLPGEFVGIFSSPPP*ALRACG
Trigger: TCCGCAAGCTCTCAGCGCCCAGGGTGGCGGCGACGA...GAAGATGCCTACAAATTCGCCGGGCAGATGGGCATCCAGTTGTTCGAGACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR TCA 90 bp CCACTCCACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCGGTGATGTAGCTGCCTaGGAAAGTGTTGTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PLHWHGLAADAARTCRCLGDVAA*ESVVCK
Trigger: TTTGCAGACAACACTTTCTCAGGCAGCTACATCACC...GAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp CGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGACCACGGTCCGGATCTTaGAATCCACTCCGATCGTGG +
Preference number: 4 (lower is better)
Translates to: RGGRGRKCRWHLPIQKHGPRSGS*NPLRSW
Trigger: CCACGATCGGAGTGGATTTCAAGATCCGGACCGTGG...TCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp GCTGACAACCTGTCGGAGAGAATGAGCAACGCGGAGCCCACTCCACTGGCACGGGATAATACGTGGAGGTaGTGGTGCGGAAGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: ADNLSERMSNAEPTPLARDNTWR*WCGSAP
Trigger: AGGAGCGCTTCCGCACCATCACCTCCACGTATTATC...CCGTGCCAGTGGAGTGGGCTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp TGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAACATCTCTTCCACGTTaGCATTCTCCTTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CTDSANQSARRAASSPGPTSLPR*HSPWRW
Trigger: CCAGCGCCAAGGAGAATGTCAACGTGGAAGAGATGT...TGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp TACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCTGCAGTGTAGACTCCTaGCCTCCAGTGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: YTMYRLCESVRSAGSVLACSVDS*PPVGGN
Trigger: GTTGCCTCCCACTGGAGGTCAGGAGTCTACACTGCA...GGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp TGTGCAGCGGGGACAGAGGCTGACAACCTGTCGGAGAGAATGAGCAACGCGGAGCCCGTGGCTCCAAAGTaGAGGCCTGTCCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: CAAGTEADNLSERMSNAEPVAPK*RPVPES
Trigger: TGATTCTGGGACAGGCCTTCACTTTGGAGCCACGGG...CTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGCCTCTGTCCCCGCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp CTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTACAGTAAACTGCTCTTaGCCACACCGCTGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: LCTDSANQSARRAASSPGTVNCS*PHRCRR
Trigger: TCGGCGACAGCGGTGTGGGCAAGAGCAGTTTACTGT...ACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000534951.5
CDS-3UTR GCA 90 bp CAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCACTATGTACAGACTCTaGGAATCAGTCCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QHLLGTRGGRGRKCRWHLTMYRL*ESVRSA
Trigger: CGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGT...GAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp GGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTCAGAGGCCCCAGGCATaGACTCCCCACAGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: GGGGSADGTSRYKNMERIQRPQA*TPHSAR
Trigger: TCGGGCACTGTGGGGAGTGCATGCCTGGGGCCTCTG...AATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp TGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCGGGAGGAAGTGCCGATaGCACCTCCCGATACAAAAA +
Preference number: 4 (lower is better)
Translates to: WSNTFLALEEGGGGSADGGRKCR*HLPIQK
Trigger: TTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCC...GCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp ATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCGTAAATGAGAAGCCATaGCTGCCCTGGGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: MYRLCESVRSAGSVLARSVNEKP*LPWVWS
Trigger: GCTCCAAACCCAGGGCAGCCATGGCTTCTCATTTAC...GGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp AGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAACAAGCACACCCTCGCTaGCCTCGCCTGATCGCTCAG +
Preference number: 4 (lower is better)
Translates to: RAGEEVPMAPPDTKTWREQAHPR*PRLIAQ
Trigger: CTGAGCGATCAGGCGAGGCCAGCGAGGGTGTGCTTG...TTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp CTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTACATTGCCTCTTTGGTaGAGGGGAGGGAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LCTDSANQSARRAASSPGTLPLW*RGGSGP
Trigger: TGGACCACTCCCTCCCCTCCACCAAAGAGGCAATGT...ACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp CAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGGGGCGGCTTCCGAGTTaGACAGAACGGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QDVVCGRVEQYTLCTDSAGRLPS*TERELP
Trigger: CGGCAGCTCCCGTTCTGTCCAACTCGGAAGCCGCCC...CGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp GGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGGGAGAAGCCCGGTCGTaGACGTTGTTGCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GGRGRKCRWHLPIQKHGEGEARS*TLLLPH
Trigger: ATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCC...CTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR TCA 90 bp TGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCATTCTGGTTGATTTCGTaGAGCCACCGCTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: CTDSANQSARRAASSPGPFWLIS*SHRLTL
Trigger: CAACGTCAAGCGGTGGCTTCACGAAATCAACCAGAA...TGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp CGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAATAACGGCACGAAACTaGGACTGTCCCCCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RGGRGRKCRWHLPIQKHGITARN*DCPPRN
Trigger: GTTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTAT...TCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp AGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTGGGAGGCCCCTTCTACCTGTTGGTGTAAATaGGAAGCCATGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RLLTSSGRQLGQGWEAPSTCWCK*EAMAAL
Trigger: CAGGGCAGCCATGGCTTCTCATTTACACCAACAGGT...AGAAGGGGCCTCCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCGTCATCAAGTGCAGATaGCCCTGGTTGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVVIKCR*PWLFSR
Trigger: CCTGGAGAACAACCAGGGTCATCTGCACTTGATGAC...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp GACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGGCTGTGTCCCAGATCTaGAGCTTCACCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: DAARTCRCLLRTLLAVRWAVSQI*SFTFSP
Trigger: CGGGGAGAAGGTGAAGCTGCAGATCTGGGACACAGC...CCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp GCGCGGGGAGGGTCTGTTGCAGCAGGCTGGCATCAAGAAGGCAAAAGCCAGAGCCAGGTTGTCTTTCTTTaGTCGGAGGACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: ARGGSVAAGWHQEGKSQSQVVFL*SEDQLR
Trigger: ACGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTG...GCTCTGGCTTTTGCCTTCTTGATGCCAGCCTGCTGCAACAGACCCTCCCCGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp CCACTCCACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCTTCTGTTGTTGCTGCTaGTGTTTTGCCAGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: PLHWHGLAADAARTCRCLFCCCC*CFARLS
Trigger: AGACAACCTGGCAAAACAGCAGCAGCAACAACAGAA...GAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp GGAGGCCCCTTCTCCGCTCCCACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGACTATGTACAGACTCTaGGAATCAGTCCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GGPFSAPTKKAQESSPTMTMYRL*ESVRSA
Trigger: CGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGT...CATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTGGGAGCGGAGAAGGGGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp GGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTGGAACTGCAGGGCCTaGCTTGAGACCAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GRGRKCRWHLPIQKHGENWNCRA*LETRFP
Trigger: GGGGAACCTGGTCTCAAGGCAGGCCCTGCAGTTCCA...ATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp CGCAGTGCAGTCTCTGCAGTGGACTGGGTGCCATTAGCAGCAGCGTTTCTTTCGTGGAACTGCAGGGCCTaGCTTGAGACCAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: RSAVSAVDWVPLAAAFLSWNCRA*LETRFP
Trigger: GGGGAACCTGGTCTCAAGGCAGGCCCTGCAGTTCCA...CGAAAGAAACGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGACTGCACTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp CAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGGGTCCAACACCTTCTTaGCACTCGAGGAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QDVVCGRVEQYTLCTDSAGPTPS*HSRRAG
Trigger: CCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACC...CGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp TGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCATCTGTTGCAGCAGGCTaGCATCAAGAAGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: CTDSANQSARRAASSPGPSVAAG*HQEGKS
Trigger: GCTTTTGCCTTCTTGATGCCAGCCTGCTGCAACAGA...TGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp AGGCTGCAGTGTAGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTGGTGGCTGCCCTGGGTTTaGAGCTCAGAGGCATCTAGA +
Preference number: 4 (lower is better)
Translates to: RLQCRLLTSSGRQLGQGWWLPWV*SSEASR
Trigger: TCTAGATGCCTCTGAGCTCCAAACCCAGGGCAGCCA...CCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCTACACTGCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCGTAAATGAGAAGCCATaGCTGCCCTGGGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVVNEKP*LPWVWS
Trigger: GCTCCAAACCCAGGGCAGCCATGGCTTCTCATTTAC...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp GGGCTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGAAGTCCAGCCCCACAATaGCAGGAAGCCATTCATTTT +
Preference number: 4 (lower is better)
Translates to: GLVQHLLGTRGGRGRKCRSPAPQ*QEAIHF
Trigger: AAAATGAATGGCTTCCTGCCATTGTGGGGCTGGACT...TCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp ACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGGCTGGGGAGGGGGGCAGTTTGGGCAAGTaGAGAGTCGGTGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TCRCLLRTLLAVRWAGEGGSLGK*RVGEKK
Trigger: TTTCTTCTCACCGACTCTCCACTTGCCCAAACTGCC...CCCCTCCCCAGCCCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp GAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACTGGTGATGTAGCTGCCTaGGAAAGTGTTGTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: EEGAPVGKGGLVQHLLGTGDVAA*ESVVCK
Trigger: TTTGCAGACAACACTTTCTCAGGCAGCTACATCACC...AGTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp GCAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCGTCGTAAACCACAATaGCCCCGTGGGTCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: AIYTMYRLCESVRSAGSVRRKPQ*PRGSPD
Trigger: ATCGGGGGACCCACGGGGTCATTGTGGTTTACGACG...GACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp GCAAAAGCCAGAGCAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGACCTGTCGGAGAGAATaGGCAACGCGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: AKARAGRGVRPGRAIYTMTCRRE*ATRSPL
Trigger: GAGTGGGCTCCGCGTTGCTCATTCTCTCCGACAGGT...CATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp TCCACGTTGACATTCTCCTTGGCGCTGGTCTCGAACAACTGGATGCCCATCTGCACCTGTCGGAGAGAATaGGCAACGCGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: STLTFSLALVSNNWMPICTCRRE*ATRSPL
Trigger: GAGTGGGCTCCGCGTTGCTCATTCTCTCCGACAGGT...GCAGATGGGCATCCAGTTGTTCGAGACCAGCGCCAAGGAGAATGTCAACGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR TCA 90 bp CCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTACAGGCACACTGTCATaGCCAAAATCACCCCAATAC +
Preference number: 4 (lower is better)
Translates to: PTPSWHSRRAGEEVPMAPTGTLS*PKSPQY
Trigger: GTATTGGGGTGATTTTGGTCATGACAGTGTGCCTGT...AGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp CCGACCTTTCTGTTGGAACTGAAACCTGTTGGTGTAAATGAGAAGCCATGGCTGCAGCTCCCTTCGGGCTaGTCCGGCAGCGGCGGATCC +
Preference number: 4 (lower is better)
Translates to: PTFLLELKPVGVNEKPWLQLPSG*SGSGGS
Trigger: GGATCCGCCGCTGCCGGAGCAGCCCGAAGGGAGCTG...CAGCCATGGCTTCTCATTTACACCAACAGGTTTCAGTTCCAACAGAAAGGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp GGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATGCTGTGTCCCAGATCTaGAGCTTCACCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GRGRKCRWHLPIQKHGENAVSQI*SFTFSP
Trigger: CGGGGAGAAGGTGAAGCTGCAGATCTGGGACACAGC...ATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp ATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCACATCGTTCTGTTGTTaGTGCTGCTGTTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: MYRLCESVRSAGSVLARSTSFCC*CCCFAR
Trigger: CCTGGCAAAACAGCAGCAGCAACAACAGAACGATGT...GGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp CAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGGCGGGGAGGGTCTGTTaGAGCAGGCTGGCATCAAGA +
Preference number: 4 (lower is better)
Translates to: QDVVCGRVEQYTLCTDSAAGRVC*SRLASR
Trigger: TCTTGATGCCAGCCTGCTGCAACAGACCCTCCCCGC...CGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp GCAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCGCGGGGAGGGTCTGTTaGAGCAGGCTGGCATCAAGA +
Preference number: 4 (lower is better)
Translates to: AIYTMYRLCESVRSAGSVAGRVC*SRLASR
Trigger: TCTTGATGCCAGCCTGCTGCAACAGACCCTCCCCGC...GACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp AGGGTCTGTTGCAGCAGGCTGGCATCAAGAAGGCAAAAGCCAGAGCAGGACGTGCCTCAGGACGCTGCTTaGAGTAAGATGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RVCCSRLASRRQKPEQDVPQDAA*SKMGWG
Trigger: TCCCCAGCCCATCTTACTGCAAGCAGCGTCCTGAGG...CACGTCCTGCTCTGGCTTTTGCCTTCTTGATGCCAGCCTGCTGCAACAGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp GTTGCTGCTGCTGTTTTGCCAGGTTGTCTTTCTTTGCTCGGAGGACCAGCTCCGCCACCTCTGTGGAACTaGAGGGCCTGCCTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VAAAVLPGCLSLLGGPAPPPLWN*RACLET
Trigger: GGTCTCAAGGCAGGCCCTGCAGTTCCACAGAGGTGG...CGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTGGCAAAACAGCAGCAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp CACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGGCAGGAAGCCATTCATTTTTCCTGCTGGTCAGCCCTaGAGCCCCCTCCACAGCACC +
Preference number: 4 (lower is better)
Translates to: HQESPRVQPHNGRKPFIFPAGQP*SPLHST
Trigger: GGTGCTGTGGAGGGGGCTGCAGGGCTGACCAGCAGG...AAAAATGAATGGCTTCCTGCCATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp CCGACCTTTCTGTTGGAACTGAAACCTGTTGGTGTAAATGAGAAGCCATGGCTGGGGCGGGGTCGGTACTaGCCTCGCGATCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PTFLLELKPVGVNEKPWLGRGRY*PRDPQL
Trigger: GAGCTGCGGATCGCGAGGCCAGTACCGACCCCGCCC...CAGCCATGGCTTCTCATTTACACCAACAGGTTTCAGTTCCAACAGAAAGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGACATTCTCCTTGGCGCTaGTCTCGAACAACTGGATGC +
Preference number: 4 (lower is better)
Translates to: RGGRGRKCRWHLPIQKHGHSPWR*SRTTGC
Trigger: GCATCCAGTTGTTCGAGACCAGCGCCAAGGAGAATG...TCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGAACCGTGGGCCTCGGGCTaGGGGAGGGACCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HGENSLNNGTKLRLSPEEPWASG*GRDRSA
Trigger: TGCACTGCGGTCCCTCCCCCAGCCCGAGGCCCACGG...TTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp ATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCGGGAGGAAGTGCCGATaGCACCTCCCGATACAAAAA +
Preference number: 4 (lower is better)
Translates to: ICWPKGKTCHLCGTAGPAGRKCR*HLPIQK
Trigger: TTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCC...GGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CTTCCGTCTCCACCACCTTCCGCTCAGGGTCGTCATTCTTATTACCCACTAATAGGGAGGGAAGGGAGCTaGCACAGGCCCCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LPSPPPSAQGRHSYYPLIGREGS*HRPRRR
Trigger: CCTTCTCCGGGGCCTGTGCCAGCTCCCTTCCCTCCC...TATTAGTGGGTAATAAGAATGACGACCCTGAGCGGAAGGTGGTGGAGACGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp CCCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAACCTGTTGGATGAGGTGTCCGGGCTaGGGGTCGGGGAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PISARTYPDLSVGTETCWMRCPG*GSGSSH
Trigger: ATGACTGCTCCCCGACCCCCAGCCCGGACACCTCAT...CCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp TGTGCAGCGGGGACAGAGGCTGACAACCTGTCGGAGAGAATGAGCAACGCGGAGAGCGCTGTGACCTCTTaGAGCCCACATTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CAAGTEADNLSERMSNAESAVTS*SPHCLF
Trigger: AAAGAGGCAATGTGGGCTCCAAGAGGTCACAGCGCT...CTCCGCGTTGCTCATTCTCTCCGACAGGTTGTCAGCCTCTGTCCCCGCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR TCA 90 bp GAGGGACCGCAGTGCAGTCTCTGCAGTGGACTGGGTGCCATTAGCAGCAGCGTTTTCTGGTTGATTTCGTaGAGCCACCGCTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: EGPQCSLCSGLGAISSSVFWLIS*SHRLTL
Trigger: CAACGTCAAGCGGTGGCTTCACGAAATCAACCAGAA...AACGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGACTGCACTGCGGTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp CCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTGTTTACTGTTCTTCGTaGGCTTCACCACATCGTTCT +
Preference number: 4 (lower is better)
Translates to: PTPSWHSRRAGEEVPMAPVYCSS*ASPHRS
Trigger: AGAACGATGTGGTGAAGCTCACGAAGAACAGTAAAC...AGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp TGGGGGTCGGGGAGCAGTCATCAAGTGCAGATGACCCTGGTTGTTCTCCAGGGCCAAGTGGAGAGTCGGTaGGAAGAAACCCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: WGSGSSHQVQMTLVVLQGQVESR*EETPSF
Trigger: AAAACTGGGGGTTTCTTCTCACCGACTCTCCACTTG...GCCCTGGAGAACAACCAGGGTCATCTGCACTTGATGACTGCTCCCCGACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp GGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTGAGCAGGACGTGGTGTaGGGCCGGGTAGAGCAATAT +
Preference number: 4 (lower is better)
Translates to: GGGGSADGTSRYKNMERIEQDVV*GRVEQY
Trigger: ATATTGCTCTACCCGGCCGCACACCACGTCCTGCTC...AATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp CCCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAACCTGTTGGCCACCTCTGTGGAACTaGAGGGCCTGCCTTGAGACC +
Preference number: 4 (lower is better)
Translates to: PISARTYPDLSVGTETCWPPLWN*RACLET
Trigger: GGTCTCAAGGCAGGCCCTGCAGTTCCACAGAGGTGG...CCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp CAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCAACTTTTGCTGCTGTaGCAATCAAACCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QHLLGTRGGRGRKCRWHLQLLLL*QSNLRE
Trigger: TTCCCTGAGGTTTGATTGGCACAGCAGCAAAAGTTG...GAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp GGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTCTTTATGGGCGCTGAGAGCTTaGGGAGCCGAGCCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GRKCRWHLPIQKHGENSLWALRA*GAEPLS
Trigger: CGACAGCGGCTCGGCTCCGCAAGCTCTCAGCGCCCA...TAAAGAATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp GAGGGACCGCAGTGCAGTCTCTGCAGTGGACTGGGTGCCATTAGCAGCAGCGTTTTGTGTAAGACAAGCTaGTCCCAAATCCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: EGPQCSLCSGLGAISSSVLCKTS*SQIPAV
Trigger: GACAGCGGGGATTTGGGAGCAGCTTGTCTTACACAA...AACGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGACTGCACTGCGGTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp AGAAGGCAAAAGCCAGAGCAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACAGTCTCTGCAGTGGACTaGGTGCCATTAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RRQKPEQDVVCGRVEQYTVSAVD*VPLAAA
Trigger: CGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGAC...TGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CTTCCGTCTCCACCACCTTCCGCTCAGGGTCGTCATTCTTATTACCCACTAATACTGCTTGCAGTAAGATaGGCTGGGGAGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LPSPPPSAQGRHSYYPLILLAVR*AGEGRG
Trigger: CCCGCGCCCCTCCCCAGCCCATCTTACTGCAAGCAG...TATTAGTGGGTAATAAGAATGACGACCCTGAGCGGAAGGTGGTGGAGACGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR TCA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCGTTTACTGTTCTTCGTaGGCTTCACCACATCGTTCT +
Preference number: 4 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVVYCSS*ASPHRS
Trigger: AGAACGATGTGGTGAAGCTCACGAAGAACAGTAAAC...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp CAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCCAAAGGTTAGGACAGTaGCCAGGGCCTGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: QYTLCTDSANQSARRAASQRLGQ*PGPVHG
Trigger: ACCATGGACAGGCCCTGGTCACTGTCCTAACCTTTG...GGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp AGAAGGCAAAAGCCAGAGCAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACAACAAACAGCCGGAACTaGCAGAAACACCTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: RRQKPEQDVVCGRVEQYTTNSRN*QKHLPP
Trigger: CGGAGGGAGGTGTTTCTGTCAGTTCCGGCTGTTTGT...TGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp CAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGACAGTAAACTGCTCTTaGCCACACCGCTGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: QDVVCGRVEQYTLCTDSATVNCS*PHRCRR
Trigger: TCGGCGACAGCGGTGTGGGCAAGAGCAGTTTACTGT...CGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000534951.5
CDS-3UTR GCA 90 bp AGCAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTGCTGTGTCCCAGATCTaGAGCTTCACCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SNIHYVQTLRISPLGGQRAVSQI*SFTFSP
Trigger: CGGGGAGAAGGTGAAGCTGCAGATCTGGGACACAGC...ACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp TGGGGGAGGGACCGCAGTGCAGTCTCTGCAGTGGACTGGGTGCCATTAGCAGCATTCTGTTGTTGCTGCTaGTGTTTTGCCAGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: WGRDRSAVSAVDWVPLAAFCCCC*CFARLS
Trigger: AGACAACCTGGCAAAACAGCAGCAGCAACAACAGAA...TGCTGCTAATGGCACCCAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp AGGCTGCAGTGTAGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTGGACATCGTTCTGTTGTTaGTGCTGCTGTTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLQCRLLTSSGRQLGQGWTSFCC*CCCFAR
Trigger: CCTGGCAAAACAGCAGCAGCAACAACAGAACGATGT...CCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCTACACTGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp AGGGTCTGTTGCAGCAGGCTGGCATCAAGAAGGCAAAAGCCAGAGCAGGACGTGACTATGTACAGACTCTaGGAATCAGTCCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: RVCCSRLASRRQKPEQDVTMYRL*ESVRSA
Trigger: CGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGT...CACGTCCTGCTCTGGCTTTTGCCTTCTTGATGCCAGCCTGCTGCAACAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CCA 90 bp CTTTGCTCGGAGGACCAGCTCCGTGATGCAGTTGAACATCTCTTCCACGTTGACGTCTCTGCAGTGGACTaGGTGCCATTAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LCSEDQLRDAVEHLFHVDVSAVD*VPLAAA
Trigger: CGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGAC...GTCAACGTGGAAGAGATGTTCAACTGCATCACGGAGCTGGTCCTCCGAGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp GGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATGGGAGGAAGTGCCGATaGCACCTCCCGATACAAAAA +
Preference number: 4 (lower is better)
Translates to: GRGRKCRWHLPIQKHGENGRKCR*HLPIQK
Trigger: TTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCC...ATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CCA 90 bp GACGCAGCTAGAACGTGCCGCTGTCTCCTCAGGACGCTGCTTGCAGTAAGATGGAATCAGGGCTCTCCCTaGAAATCGCCTAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: DAARTCRCLLRTLLAVRWNQGSP*KSPRKG
Trigger: TCCTTTCCTAGGCGATTTCCAGGGAGAGCCCTGATT...CCATCTTACTGCAAGCAGCGTCCTGAGGAGACAGCGGCACGTTCTAGCTGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp ATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCGGTGATGTAGCTGCCTaGGAAAGTGTTGTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: IHYVQTLRISPLGGQRPRGDVAA*ESVVCK
Trigger: TTTGCAGACAACACTTTCTCAGGCAGCTACATCACC...GCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp CGCAGTGCAGTCTCTGCAGTGGACTGGGTGCCATTAGCAGCAGCGTTTCTTTCGTTCTGGTTGATTTCGTaGAGCCACCGCTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: RSAVSAVDWVPLAAAFLSFWLIS*SHRLTL
Trigger: CAACGTCAAGCGGTGGCTTCACGAAATCAACCAGAA...CGAAAGAAACGCTGCTGCTAATGGCACCCAGTCCACTGCAGAGACTGCACTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp TACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCGTTTACTGTTCTTCGTaGGCTTCACCACATCGTTCT +
Preference number: 4 (lower is better)
Translates to: YTMYRLCESVRSAGSVLAVYCSS*ASPHRS
Trigger: AGAACGATGTGGTGAAGCTCACGAAGAACAGTAAAC...GGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp CTGCCAGCCCCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAACAGGTTGTCTTTCTTTaGTCGGAGGACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LPAPSLHEPTPTFLLELKQVVFL*SEDQLR
Trigger: ACGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTG...TTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGGGGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR GCA 90 bp CAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCCAGGTTGTCTTTCTTTaGTCGGAGGACCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: QYTLCTDSANQSARRAASQVVFL*SEDQLR
Trigger: ACGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTG...GGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp ATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCGGCCTCAACTTTTGCTaGTGTGCCAATCAAACCTCA +
Preference number: 4 (lower is better)
Translates to: IHYVQTLRISPLGGQRPRGLNFC*CANQTS
Trigger: TGAGGTTTGATTGGCACAGCAGCAAAAGTTGAGGCC...GCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp AAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGGACAGAACGGGAGCTaGCGGCGGGAGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KHGENSLNNGTKLRLSPEGQNGS*RREQSC
Trigger: GCAGCTCTGCTCCCGCCGGCAGCTCCCGTTCTGTCC...CTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp GTTGCTGCTGCTGTTTTGCCAGGTTGTCTTTCTTTGCTCGGAGGACCAGCTCCGGCCCACACTTCTCAATaGTCTTTCCACCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VAAAVLPGCLSLLGGPAPAHTSQ*SFHLPE
Trigger: CTCAGGGAGGTGGAAAGAGCATTGAGAAGTGTGGGC...CGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTGGCAAAACAGCAGCAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR TCA 90 bp GGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTCTTTACGTCGTAAACCACAATaGCCCCGTGGGTCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: GRKCRWHLPIQKHGENSLRRKPQ*PRGSPD
Trigger: ATCGGGGGACCCACGGGGTCATTGTGGTTTACGACG...TAAAGAATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp CCCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAACCTGTTGGACATCTCTTCCACGTTaGCATTCTCCTTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PISARTYPDLSVGTETCWTSLPR*HSPWRW
Trigger: CCAGCGCCAAGGAGAATGTCAACGTGGAAGAGATGT...CCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp AGGCAAAAGCCAGAGCAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTACCCCCTCTTATTGCTTaGATTTGCAAGCACACCCTC +
Preference number: 4 (lower is better)
Translates to: RQKPEQDVVCGRVEQYTLPPLIA*ICKHTL
Trigger: GAGGGTGTGCTTGCAAATTCAAGCAATAAGAGGGGG...TAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CCA 90 bp CTTTGCTCGGAGGACCAGCTCCGTGATGCAGTTGAACATCTCTTCCACGTTGACCATTCTCCTTGGCGCTaGTCTCGAACAACTGGATGC +
Preference number: 4 (lower is better)
Translates to: LCSEDQLRDAVEHLFHVDHSPWR*SRTTGC
Trigger: GCATCCAGTTGTTCGAGACCAGCGCCAAGGAGAATG...GTCAACGTGGAAGAGATGTTCAACTGCATCACGGAGCTGGTCCTCCGAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp AGGCAAAAGCCAGAGCAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTAAACAGTGGACACAAGTaGGGTGGCCTCAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: RQKPEQDVVCGRVEQYTLNSGHK*GGLNFC
Trigger: GCAAAAGTTGAGGCCACCCCACTTGTGTCCACTGTT...TAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR TCA 90 bp AGCAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCATCACAGTTCTGGTTaGTTTCGTGAAGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: SNIHYVQTLRISPLGGQRHHSSG*FREATA
Trigger: AGCGGTGGCTTCACGAAATCAACCAGAACTGTGATG...ACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp GGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATACAGTAAACTGCTCTTaGCCACACTTCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: GRGRKCRWHLPIQKHGENTVNCS*PHFSML
Trigger: GAGCATTGAGAAGTGTGGGCAAGAGCAGTTTACTGT...ATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp CTTTGCTCGGAGGACCAGCTCCGTGATGCAGTTGAACATCTCTTCCACGTTGACTCTGTTGCAGCAGGCTaGCATCAAGAAGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LCSEDQLRDAVEHLFHVDSVAAG*HQEGKS
Trigger: GCTTTTGCCTTCTTGATGCCAGCCTGCTGCAACAGA...GTCAACGTGGAAGAGATGTTCAACTGCATCACGGAGCTGGTCCTCCGAGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp CCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAACCTGTTGGTGGTGGCCTCAACTTTTaGTGCTGTGCCAATCAAACC +
Preference number: 4 (lower is better)
Translates to: PSLHEPTPTFLLELKPVGGGLNF*CCANQT
Trigger: GGTTTGATTGGCACAGCAGCAAAAGTTGAGGCCACC...ACCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp AAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGAAAGAAGCCCAAGGTaGCGGAGAAGCCCGGTCGTG +
Preference number: 4 (lower is better)
Translates to: KHGENSLNNGTKLRLSPEERSPR*RRSPVV
Trigger: CACGACCGGGCTTCTCCGGCACCTTGGGCTTCTTTC...CTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp AAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGACCTGCCACCTCTGTaGAACTGCAGGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KHGENSLNNGTKLRLSPEDLPPL*NCRACL
Trigger: AAGGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTC...CTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
3UTR CAA 72 bp GCCCCATCTCTGCACGAACCTACCCCGACCTTTCTGTaGGAACTGAAACCTGTTGGTGTAAATGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: APSLHEPTPTFL*ELKPVGVNEKP
Trigger: TGGCTTCTCATTTACACCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp CTTCCGTCTCCACCACCTTCCGCTCAGGGTCGTCATTCTTATTACCCACTAATACATCACAGTTCTGGTTaGTTTCGTGAAGCCACCGCT +
Preference number: 4 (lower is better)
Translates to: LPSPPPSAQGRHSYYPLIHHSSG*FREATA
Trigger: AGCGGTGGCTTCACGAAATCAACCAGAACTGTGATG...TATTAGTGGGTAATAAGAATGACGACCCTGAGCGGAAGGTGGTGGAGACGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp AAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGAGCAGGACGTGGTGTaGGGCCGGGTAGAGCAATAT +
Preference number: 4 (lower is better)
Translates to: KHGENSLNNGTKLRLSPEEQDVV*GRVEQY
Trigger: ATATTGCTCTACCCGGCCGCACACCACGTCCTGCTC...CTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp CATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGAACCAAAGGGCAAGACCTaGCACCTCTGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: HGENSLNNGTKLRLSPEEPKGKT*HLCGTA
Trigger: TGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGG...TTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR TCA 90 bp CAAAAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCTCACCTTCTCCCCGTTaGTCTCCACGGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: QKHGENSLNNGTKLRLSPSPSPR*SPRSGS
Trigger: AGATCCGGACCGTGGAGATCAACGGGGAGAAGGTGA...GGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR TCA 90 bp AAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGATAATACGTGGAGGTaGTGGTGCGGAAGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: KHGENSLNNGTKLRLSPEDNTWR*WCGSAP
Trigger: AGGAGCGCTTCCGCACCATCACCTCCACGTATTATC...CTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR GCA 90 bp AAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGGTCGTGGACGTTGTTaGTCCCTCATCTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: KHGENSLNNGTKLRLSPEGRGRC*SLIFET
Trigger: GGTCTCGAAGATGAGGGAGCAACAACGTCCACGACC...CTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CCA 90 bp AAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGTGGACACAAGTGGGGTaGCCTCAACTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KHGENSLNNGTKLRLSPEWTQVG*PQLLLL
Trigger: CAGCAGCAAAAGTTGAGGCCACCCCACTTGTGTCCA...CTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR GCA 90 bp CTTTCGTTTACTGTTCTTCGTGAGCTTCACCACATCGTTCTGTTGTTGCTGCTGTTCTGTTGTTGCTGCTaGTGTTTTGCCAGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LSFTVLRELHHIVLLLLLFCCCC*CFARLS
Trigger: AGACAACCTGGCAAAACAGCAGCAGCAACAACAGAA...CAGCAGCAACAACAGAACGATGTGGTGAAGCTCACGAAGAACAGTAAACGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR GCA 90 bp CATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCGAGGAAGCCAGGAAATCCTCTTaGTACCTTTGTCCTGACAAA +
Preference number: 4 (lower is better)
Translates to: HGENSLNNGTKLRLSPEEARKSS*YLCPDK
Trigger: TTTGTCAGGACAAAGGTAGCAAGAGGATTTCCTGGC...TTCCTCGGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS CCA 90 bp ACCCGCACGCCCTGCGGAGAGGAAATGACAGGCACGCCGCGACCGTaGGGCGGGGCTCGCACGAGCTCCGGGTTTCCAGAGGCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: TRTPCGEEMTGTPRP*GGARTSSGFPEAGA
Trigger: GGCCCCTGCCTCTGGAAACCCGGAGCTCGTGCGAGCCCCGCCCCACGGTCGCGGCGTGCCTGTCATTTCCTCTCCGCAGGGCGTGCGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 90 bp CCCGTCTTCCTCGCGTCTCCTCGGGGAGCGTCGTCGCCGCCACCCTaGGCGCTGAGAGCTTGCGGAGCCGAGCCGCTGTCGAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: PVFLASPRGASSPPP*ALRACGAEPLSSPS
Trigger: GCTGGGACTCGACAGCGGCTCGGCTCCGCAAGCTCTCAGCGCCCAGGGTGGCGGCGACGACGCTCCCCGAGGAGACGCGAGGAAGACGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 90 bp ACGCCGAGGGCGGCGGGCGGCTTCCGAGTTGGACAGAACGGGAGCTaGCGGCGGGAGCAGAGCTGCGAGGAGGTGGCCTTTGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: TPRAAGGFRVGQNGS*RREQSCEEVAFEGS
Trigger: GCTGCCCTCAAAGGCCACCTCCTCGCAGCTCTGCTCCCGCCGGCAGCTCCCGTTCTGTCCAACTCGGAAGCCGCCCGCCGCCCTCGGCGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 90 bp GGGCGGGGTCGGTACTGGCCTCGCGATCCGCAGCTCCCTTCGGGCTaGTCCGGCAGCGGCGGATCCACTTCCCGAACAAACAGCCGGAAC +
Preference number: 5 (lower is better)
Translates to: GRGRYWPRDPQLPSG*SGSGGSTSRTNSRN
Trigger: GTTCCGGCTGTTTGTTCGGGAAGTGGATCCGCCGCTGCCGGAGCAGCCCGAAGGGAGCTGCGGATCGCGAGGCCAGTACCGACCCCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534951.5
ENST00000540803.1
ENST00000544304.5
CDS TCA 90 bp GAACGGGAGCTGCCGGCGGGAGCAGAGCTGCGAGGAGGTGGCCTTTaGGGGCAGCGCGGGGTCGAAATCCCATCCCAGCGCTGTGACCTC +
Preference number: 5 (lower is better)
Translates to: ERELPAGAELRGGGL*GQRGVEIPSQRCDL
Trigger: GAGGTCACAGCGCTGGGATGGGATTTCGACCCCGCGCTGCCCTCAAAGGCCACCTCCTCGCAGCTCTGCTCCCGCCGGCAGCTCCCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 90 bp TTGGACAGAACGGGAGCTGCCGGCGGGAGCAGAGCTGCGAGGAGGTaGCCTTTGAGGGCAGCGCGGGGTCGAAATCCCATCCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: LDRTGAAGGSRAARR*PLRAARGRNPIPAL
Trigger: CAGCGCTGGGATGGGATTTCGACCCCGCGCTGCCCTCAAAGGCCACCTCCTCGCAGCTCTGCTCCCGCCGGCAGCTCCCGTTCTGTCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 90 bp GGCTTCCGAGTTGGACAGAACGGGAGCTGCCGGCGGGAGCAGAGCTaGGAGGAGGTGGCCTTTGAGGGCAGCGCGGGGTCGAAATCCCAT +
Preference number: 5 (lower is better)
Translates to: GFRVGQNGSCRREQS*EEVAFEGSAGSKSH
Trigger: ATGGGATTTCGACCCCGCGCTGCCCTCAAAGGCCACCTCCTCGCAGCTCTGCTCCCGCCGGCAGCTCCCGTTCTGTCCAACTCGGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 90 bp GCGGAGCCGAGCCGCTGTCGAGTCCCAGCGGAAAGAAGCCCAAGGTaGCGGAGAAGCCCGGTCGTGGACGTTGTTGCTCCCTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: AEPSRCRVPAERSPR*RRSPVVDVVAPSSS
Trigger: CGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGCTTCTTTCCGCTGGGACTCGACAGCGGCTCGGCTCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 90 bp CCATCCCAGCGCTGTGACCTCTTGGAGCCCACATTGCCTCTTTGGTaGAGGGGAGGGAGTGGTCCAGCTCCGAGCCGAGCCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PSQRCDLLEPTLPLW*RGGSGPAPSRAWEL
Trigger: CAGCTCCCAGGCTCGGCTCGGAGCTGGACCACTCCCTCCCCTCCACCAAAGAGGCAATGTGGGCTCCAAGAGGTCACAGCGCTGGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 90 bp GAGTCCCAGCGGAAAGAAGCCCAAGGTGCCGGAGAAGCCCGGTCGTaGACGTTGTTGCTCCCTCATCTTCGAGACCCGCACGCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: ESQRKEAQGAGEARS*TLLLPHLRDPHALR
Trigger: CCGCAGGGCGTGCGGGTCTCGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGCTTCTTTCCGCTGGGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp GAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACTCGCGGGGAGGGTCTGTaGCAGCAGGCTGGCATCAAG +
Preference number: 5 (lower is better)
Translates to: EEGAPVGKGGLVQHLLGTRGEGL*QQAGIK
Trigger: CTTGATGCCAGCCTGCTGCAACAGACCCTCCCCGCG...AGTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS TCA 90 bp TGCTCCGGCAGCGGCGGATCCACTTCCCGAACAAACAGCCGGAACTaGCAGAAACACCTCCCTCCGCTCCCCCTCCTCCTCCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CSGSGGSTSRTNSRN*QKHLPPLPLLLLSS
Trigger: GCTGCTGAGGAGGAGGAGGGGGAGCGGAGGGAGGTGTTTCTGTCAGTTCCGGCTGTTTGTTCGGGAAGTGGATCCGCCGCTGCCGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 90 bp ATCCCATCCCAGCGCTGTGACCTCTTGGAGCCCACATTGCCTCTTTaGTGGAGGGGAGGGAGTGGTCCAGCTCCGAGCCGAGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: IPSQRCDLLEPTLPL*WRGGSGPAPSRAWE
Trigger: CTCCCAGGCTCGGCTCGGAGCTGGACCACTCCCTCCCCTCCACCAAAGAGGCAATGTGGGCTCCAAGAGGTCACAGCGCTGGGATGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 90 bp GAGGGCAGCGCGGGGTCGAAATCCCATCCCAGCGCTGTGACCTCTTaGAGCCCACATTGCCTCTTTGGTGGAGGGGAGGGAGTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: EGSAGSKSHPSAVTS*SPHCLFGGGEGVVQ
Trigger: CTGGACCACTCCCTCCCCTCCACCAAAGAGGCAATGTGGGCTCCAAGAGGTCACAGCGCTGGGATGGGATTTCGACCCCGCGCTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp TGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCATGGTCCAACACCTTCTaGGCACTCGAGGAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: CTDSANQSARRAASSPGPWSNTF*ALEEGG
Trigger: CCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCA...TGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp CGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGACGGGCGGCTTCCGAGTaGGACAGAACGGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RGGRGRKCRWHLPIQKHGRAASE*DRTGAA
Trigger: GGCAGCTCCCGTTCTGTCCAACTCGGAAGCCGCCCG...TCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp CCACTCCACTGGCACGGGCTGGCCGCAGACGCAGCTAGAACGTGCCGCTGTCTCCGGTCGTGGACGTTGTaGCTCCCTCATCTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: PLHWHGLAADAARTCRCLRSWTL*LPHLRD
Trigger: GTCTCGAAGATGAGGGAGCAACAACGTCCACGACCG...GAGACAGCGGCACGTTCTAGCTGCGTCTGCGGCCAGCCCGTGCCAGTGGAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 90 bp GGGTCGAAATCCCATCCCAGCGCTGTGACCTCTTGGAGCCCACATTaGCTCTTTGGTGGAGGGGAGGGAGTGGTCCAGCTCCGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: GSKSHPSAVTSWSPH*LFGGGEGVVQLRAE
Trigger: CTCGGCTCGGAGCTGGACCACTCCCTCCCCTCCACCAAAGAGGCAATGTGGGCTCCAAGAGGTCACAGCGCTGGGATGGGATTTCGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp ACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCAACAGTAAACTGCTCTaGCCCACACCGCTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: TPSWHSRRAGEEVPMAPPNSKLL*PTPLSP
Trigger: CGGCGACAGCGGTGTGGGCAAGAGCAGTTTACTGTT...GGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000534951.5
CDS-3UTR CAA 90 bp AGGCTGCAGTGTAGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTGGCGCGGGGAGGGTCTGTaGCAGCAGGCTGGCATCAAG +
Preference number: 5 (lower is better)
Translates to: RLQCRLLTSSGRQLGQGWRGEGL*QQAGIK
Trigger: CTTGATGCCAGCCTGCTGCAACAGACCCTCCCCGCG...CCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCTACACTGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CAA 90 bp AGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTGGGAGGCCCCTTCTACTGCAGGGCCTGCCTaGAGACCAGGTTCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: RLLTSSGRQLGQGWEAPSTAGPA*RPGSPA
Trigger: AGCTGGGGAACCTGGTCTCAAGGCAGGCCCTGCAGT...AGAAGGGGCCTCCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CAA 90 bp CAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCGCGTCTGGCACCGCCTaGCGCAGCCGCAGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: QYTLCTDSANQSARRAASASGTA*RSRSLS
Trigger: GCTCAGGCTGCGGCTGCGCAAGGCGGTGCCAGACGC...GGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 90 bp GGAAAGAAGCCCAAGGTGCCGGAGAAGCCCGGTCGTGGACGTTGTTaGTCCCTCATCTTCGAGACCCGCACGCCCTGCGGAGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: GKKPKVPEKPGRGRC*SLIFETRTPCGEEM
Trigger: CATTTCCTCTCCGCAGGGCGTGCGGGTCTCGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGCTTCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp CAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCTTCACCTTCTCCCCGTaGATCTCCACGGTCCGGATC +
Preference number: 5 (lower is better)
Translates to: QHLLGTRGGRGRKCRWHLFTFSP*ISTVRI
Trigger: GATCCGGACCGTGGAGATCAACGGGGAGAAGGTGAA...GAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp ATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCACTGCAGGGCCTGCCTaGAGACCAGGTTCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: ICWPKGKTCHLCGTAGPATAGPA*RPGSPA
Trigger: AGCTGGGGAACCTGGTCTCAAGGCAGGCCCTGCAGT...GGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp AGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCAGGCGCACCCCGACCTTTCTGTaGGAACTGAAACCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: RLCESVRSAGSVLARSRRTPTFL*ELKPVG
Trigger: ACCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGT...GCGCCTGGACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp GGGGAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCAACATCTCTTCCACGTaGACATTCTCCTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GEEGAPVGKGGLVQHLLGNISST*TFSLAL
Trigger: CAGCGCCAAGGAGAATGTCAACGTGGAAGAGATGTT...GCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp CGGGCTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGCTGCCTGAGAAAGTGTaGTCTGCAAAACGCAACAGT +
Preference number: 5 (lower is better)
Translates to: RAGPTPSWHSRRAGEEVPLPEKV*SAKRNS
Trigger: ACTGTTGCGTTTTGCAGACAACACTTTCTCAGGCAG...CGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp CTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTTCCACGGTCCGGATCTaGAAATCCACTCCGATCGTG +
Preference number: 5 (lower is better)
Translates to: LCTDSANQSARRAASSPGSTVRI*KSTPIV
Trigger: CACGATCGGAGTGGATTTCAAGATCCGGACCGTGGA...ACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp CGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGATTCACCTTCTCCCCGTaGATCTCCACGGTCCGGATC +
Preference number: 5 (lower is better)
Translates to: RGGRGRKCRWHLPIQKHGFTFSP*ISTVRI
Trigger: GATCCGGACCGTGGAGATCAACGGGGAGAAGGTGAA...TCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp ATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCAGCCACCGCTTGACGTaGACAAAGGACTCGGCACTG +
Preference number: 5 (lower is better)
Translates to: ICWPKGKTCHLCGTAGPASHRLT*TKDSAL
Trigger: CAGTGCCGAGTCCTTTGTCAACGTCAAGCGGTGGCT...GGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp GAGGAGGGGGCACCAGTAGGGAAGGGCGGGCTGGTCCAACACCTTCTTGGCACTACGTTGACATTCTCCTaGGCGCTGGTCTCGAACAAC +
Preference number: 5 (lower is better)
Translates to: EEGAPVGKGGLVQHLLGTTLTFS*ALVSNN
Trigger: GTTGTTCGAGACCAGCGCCAAGGAGAATGTCAACGT...AGTGCCAAGAAGGTGTTGGACCAGCCCGCCCTTCCCTACTGGTGCCCCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp GGGCTGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGCTGTTTTGCCAGGTaGTCTTTCTTTGCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: GLVQHLLGTRGGRGRKCRCCFAR*SFFARR
Trigger: CCTCCGAGCAAAGAAAGACAACCTGGCAAAACAGCA...TCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp ATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCAGCCACCGCTTGACGTaGACAAAGGACTCGGCACTG +
Preference number: 5 (lower is better)
Translates to: IHYVQTLRISPLGGQRPRSHRLT*TKDSAL
Trigger: CAGTGCCGAGTCCTTTGTCAACGTCAAGCGGTGGCT...GCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp TGGTCCAACACCTTCTTGGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCAGCTCCGTGATGCAGTaGAACATCTCTTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: WSNTFLALEEGGGGSADGSSVMQ*NISSTL
Trigger: CAACGTGGAAGAGATGTTCAACTGCATCACGGAGCT...GCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp CAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGTGGTCCAACACCTTCTaGGCACTCGAGGAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: QDVVCGRVEQYTLCTDSAWSNTF*ALEEGG
Trigger: CCCGCCCTCCTCGAGTGCCAAGAAGGTGTTGGACCA...CGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp GGCACTCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAAGGGTGGCCTCAACTTTaGCTGCTGTGCCAATCAAAC +
Preference number: 5 (lower is better)
Translates to: GTRGGRGRKCRWHLPIQKGWPQL*LLCQSN
Trigger: GTTTGATTGGCACAGCAGCAAAAGTTGAGGCCACCC...TTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CAA 90 bp GGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTTCACCTTCTCCCCGTaGATCTCCACGGTCCGGATC +
Preference number: 5 (lower is better)
Translates to: GRGRKCRWHLPIQKHGENFTFSP*ISTVRI
Trigger: GATCCGGACCGTGGAGATCAACGGGGAGAAGGTGAA...ATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCCACATCGTTCTGTTGTaGCTGCTGCTGTTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVHIVLL*LLLFCQ
Trigger: CTGGCAAAACAGCAGCAGCAACAACAGAACGATGTG...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp GGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTAACAGTAAACTGCTCTaGCCCACACCGCTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: GGGGSADGTSRYKNMERINSKLL*PTPLSP
Trigger: CGGCGACAGCGGTGTGGGCAAGAGCAGTTTACTGTT...AATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000534951.5
CDS-3UTR CAA 90 bp AGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATCCACGGTCCGGATCTaGAAATCCACTCCGATCGTG +
Preference number: 5 (lower is better)
Translates to: RAGEEVPMAPPDTKTWRESTVRI*KSTPIV
Trigger: CACGATCGGAGTGGATTTCAAGATCCGGACCGTGGA...TTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp ATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCAACATCTCTTCCACGTaGACATTCTCCTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: ICWPKGKTCHLCGTAGPANISST*TFSLAL
Trigger: CAGCGCCAAGGAGAATGTCAACGTGGAAGAGATGTT...GGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp CAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGCCAGGTTGTCTTTCTTaGCTCGGAGGACCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: QDVVCGRVEQYTLCTDSAPGCLS*LGGPAP
Trigger: CGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTGG...CGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp AGGCAAAAGCCAGAGCAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTACCAGGTTGTCTTTCTTaGCTCGGAGGACCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: RQKPEQDVVCGRVEQYTLPGCLS*LGGPAP
Trigger: CGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTGG...TAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTGCTCTGGCTTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp AGACTCCTGACCTCCAGTGGGAGGCAACTCGGACAAGGGTGGGAGGCCCCTTCTGTTGCTGCTGCTGTTTaGCCAGGTTGTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RLLTSSGRQLGQGWEAPSVAAAV*PGCLSL
Trigger: CAAAGAAAGACAACCTGGCAAAACAGCAGCAGCAAC...AGAAGGGGCCTCCCACCCTTGTCCGAGTTGCCTCCCACTGGAGGTCAGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CAA 90 bp TGGGGGAGGGACCGCAGTGCAGTCTCTGCAGTGGACTGGGTGCCATTAGCAGCAGTTGCTGCTGCTGTTTaGCCAGGTTGTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: WGRDRSAVSAVDWVPLAAVAAAV*PGCLSL
Trigger: CAAAGAAAGACAACCTGGCAAAACAGCAGCAGCAAC...TGCTGCTAATGGCACCCAGTCCACTGCAGAGACTGCACTGCGGTCCCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp TCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGCACATCGTTCTGTTGTaGCTGCTGCTGTTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: SRRAGEEVPMAPPDTKTWHIVLL*LLLFCQ
Trigger: CTGGCAAAACAGCAGCAGCAACAACAGAACGATGTG...CCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp TATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCTCGCCAGGTCTCTTATTGCTTGAATTaGCAAGCACACCCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: YVQTLRISPLGGQRPRQVSYCLN*QAHPRW
Trigger: CCAGCGAGGGTGTGCTTGCAAATTCAAGCAATAAGA...GACCTGGCGAGGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CAA 90 bp CAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCCAGCGCTGTGACCTCTaGGAGCCCACATTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: QYTLCTDSANQSARRAASQRCDL*EPTLPL
Trigger: AAGAGGCAATGTGGGCTCCAAGAGGTCACAGCGCTG...GGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp CCCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAACCTGTTGGGCCCGGTCGTGGACGTaGTTGCTCCCTCATCTTCGA +
Preference number: 5 (lower is better)
Translates to: PISARTYPDLSVGTETCWARSWT*LLPHLR
Trigger: TCGAAGATGAGGGAGCAACAACGTCCACGACCGGGC...CCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp CTTTCGTTTACTGTTCTTCGTGAGCTTCACCACATCGTTCTGTTGTTGCTGCTGCTGGGCGCTGAGAGCTaGCGGAGCCGAGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LSFTVLRELHHIVLLLLLLGAES*RSRAAV
Trigger: GACAGCGGCTCGGCTCCGCAAGCTCTCAGCGCCCAG...CAGCAGCAACAACAGAACGATGTGGTGAAGCTCACGAAGAACAGTAAACGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp ATCTGTTGGCCAAAGGGCAAGACCTGCCACCTCTGTGGAACTGCAGGGCCTGCCCCTTTTCCTTCGTCCTaGTGTAAGACAAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ICWPKGKTCHLCGTAGPAPFPSS*CKTSCS
Trigger: GGAGCAGCTTGTCTTACACAAGGACGAAGGAAAAGG...GGCAGGCCCTGCAGTTCCACAGAGGTGGCAGGTCTTGCCCTTTGGCCAACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp TCGAGGAGGGCGGGGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGCTGCCTGAGAAAGTGTaGTCTGCAAAACGCAACAGT +
Preference number: 5 (lower is better)
Translates to: SRRAGEEVPMAPPDTKTWLPEKV*SAKRNS
Trigger: ACTGTTGCGTTTTGCAGACAACACTTTCTCAGGCAG...CCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCCCCGCCCTCCTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp GGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGAACCAGGTTGTCTTTCTTaGCTCGGAGGACCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: GRGVRPGRAIYTMYRLCEPGCLS*LGGPAP
Trigger: CGGAGCTGGTCCTCCGAGCAAAGAAAGACAACCTGG...TTCGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS TCA 90 bp GTAAACTGCTCTTGCCCACACTTCTCAATGCTCTTTCCACCTCCCTaGGCGGCCACACACCAAGAACATCTCTTCCACTCGATCCCTGAC +
Preference number: 5 (lower is better)
Translates to: VNCSCPHFSMLFPPP*AATHQEHLFHSIPD
Trigger: GTCAGGGATCGAGTGGAAGAGATGTTCTTGGTGTGTGGCCGCTCAGGGAGGTGGAAAGAGCATTGAGAAGTGTGGGCAAGAGCAGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp CACCAAGAAAGCCCAAGAGTCCAGCCCCACAATGGCAGGAAGCCATTCATTTTTAGCCACCGCTTGACGTaGACAAAGGACTCGGCACTG +
Preference number: 5 (lower is better)
Translates to: HQESPRVQPHNGRKPFIFSHRLT*TKDSAL
Trigger: CAGTGCCGAGTCCTTTGTCAACGTCAAGCGGTGGCT...AAAAATGAATGGCTTCCTGCCATTGTGGGGCTGGACTCTTGGGCTTTCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CAA 90 bp AGCAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTACGTTGACATTCTCCTaGGCGCTGGTCTCGAACAAC +
Preference number: 5 (lower is better)
Translates to: SNIHYVQTLRISPLGGQRTLTFS*ALVSNN
Trigger: GTTGTTCGAGACCAGCGCCAAGGAGAATGTCAACGT...ACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp CTGCCAGCCCCATCTCTGCACGAACCTACCCCGACCTTTCTGTTGGAACTGAAACACATCGTTCTGTTGTaGCTGCTGCTGTTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: LPAPSLHEPTPTFLLELKHIVLL*LLLFCQ
Trigger: CTGGCAAAACAGCAGCAGCAACAACAGAACGATGTG...TTTCAGTTCCAACAGAAAGGTCGGGGTAGGTTCGTGCAGAGATGGGGCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS-3UTR CAA 90 bp CAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCACCCCGACCTTTCTGTaGGAACTGAAACCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: QYTLCTDSANQSARRAASTPTFL*ELKPVG
Trigger: ACCAACAGGTTTCAGTTCCAACAGAAAGGTCGGGGT...GGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229340.10
ENST00000544304.5
CDS TCA 90 bp TCCCTGAGCGGCCACACACCAAGAACATCTCTTCCACTCGATCCCTaGCCTTTTCCTTCGTCCTTGTGTAAGACAAGCTGCTCCCAAATC +
Preference number: 5 (lower is better)
Translates to: SLSGHTPRTSLPLDP*PFPSSLCKTSCSQI
Trigger: GATTTGGGAGCAGCTTGTCTTACACAAGGACGAAGGAAAAGGTCAGGGATCGAGTGGAAGAGATGTTCTTGGTGTGTGGCCGCTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp CAATATACACTATGTACAGACTCTGCGAATCAGTCCGCTCGGCGGGCAGCGTCCCTGCCTGAGAAAGTGTaGTCTGCAAAACGCAACAGT +
Preference number: 5 (lower is better)
Translates to: QYTLCTDSANQSARRAASLPEKV*SAKRNS
Trigger: ACTGTTGCGTTTTGCAGACAACACTTTCTCAGGCAG...GGACGCTGCCCGCCGAGCGGACTGATTCGCAGAGTCTGTACATAGTGTATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp CAGGACGTGGTGTGCGGCCGGGTAGAGCAATATACACTATGTACAGACTCTGCGGTTGCTGCTGCTGTTTaGCCAGGTTGTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: QDVVCGRVEQYTLCTDSAVAAAV*PGCLSL
Trigger: CAAAGAAAGACAACCTGGCAAAACAGCAGCAGCAAC...CGCAGAGTCTGTACATAGTGTATATTGCTCTACCCGGCCGCACACCACGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp AGGGTCTGTTGCAGCAGGCTGGCATCAAGAAGGCAAAAGCCAGAGCAGGACGTGAACAGTAAACTGCTCTaGCCCACACTTCTCAATGCT +
Preference number: 5 (lower is better)
Translates to: RVCCSRLASRRQKPEQDVNSKLL*PTLLNA
Trigger: AGCATTGAGAAGTGTGGGCAAGAGCAGTTTACTGTT...CACGTCCTGCTCTGGCTTTTGCCTTCTTGATGCCAGCCTGCTGCAACAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS TCA 90 bp CCCACTAATATTCGGCACACATCATCACAGTTCTGGTTGATTTCGTaGAGCCACCGCTTGACGTTGACAAAGGACTCGGCACTGGTGACG +
Preference number: 5 (lower is better)
Translates to: PTNIRHTSSQFWLIS*SHRLTLTKDSALVT
Trigger: CGTCACCAGTGCCGAGTCCTTTGTCAACGTCAAGCGGTGGCTTCACGAAATCAACCAGAACTGTGATGATGTGTGCCGAATATTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000543364.1
ENST00000544304.5
CDS TCA 90 bp CCCACTAATATTCGGCACACATCATCACAGTTCTGGTTGATTTCGTaGAGCCACCGCTTGACGTTGACAAAGGACTCGGCAGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PTNIRHTSSQFWLIS*SHRLTLTKDSAVEV
Trigger: CACCTCCACTGCCGAGTCCTTTGTCAACGTCAAGCGGTGGCTTCACGAAATCAACCAGAACTGTGATGATGTGTGCCGAATATTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538903.1
CDS-3UTR CAA 90 bp CCGACCTTTCTGTTGGAACTGAAACCTGTTGGTGTAAATGAGAAGCCATGGCTGTTCTTCCCAGGTCACTaGATCCCTGTAGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PTFLLELKPVGVNEKPWLFFPGH*IPVVGG
Trigger: CCCTCCCACTACAGGGATCAAGTGACCTGGGAAGAA...CAGCCATGGCTTCTCATTTACACCAACAGGTTTCAGTTCCAACAGAAAGGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS-3UTR CAA 90 bp TGGGGGTCGGGGAGCAGTCATCAAGTGCAGATGACCCTGGTTGTTCTCCAGGGCAAAAGTGGTGTTTGTTaGACAGGAATTTCACATCAG +
Preference number: 5 (lower is better)
Translates to: WGSGSSHQVQMTLVVLQGKSGVC*TGISHQ
Trigger: CTGATGTGAAATTCCTGTCAAACAAACACCACTTTT...GCCCTGGAGAACAACCAGGGTCATCTGCACTTGATGACTGCTCCCCGACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS TCA 90 bp TCACCTAATATTCGGCACACATCATCACAGTTCTGGTTGATTTCGTaGAGCCACCGCTTGACGTTGACAAAGGACTCGGCACTGGTGACG +
Preference number: 5 (lower is better)
Translates to: SPNIRHTSSQFWLIS*SHRLTLTKDSALVT
Trigger: CGTCACCAGTGCCGAGTCCTTTGTCAACGTCAAGCGGTGGCTTCACGAAATCAACCAGAACTGTGATGATGTGTGCCGAATATTAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540803.1
CDS TCA 90 bp ACATCTAATATTCGGCACACATCATCACAGTTCTGGTTGATTTCGTaGAGCCACCGCTTGACGTTGACAAAGGACTCGGCACTGGTGACG +
Preference number: 5 (lower is better)
Translates to: TSNIRHTSSQFWLIS*SHRLTLTKDSALVT
Trigger: CGTCACCAGTGCCGAGTCCTTTGTCAACGTCAAGCGGTGGCTTCACGAAATCAACCAGAACTGTGATGATGTGTGCCGAATATTAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534951.5
CDS-3UTR CAA 90 bp GGGAGGAAGTGCCGATGGCACCTCCCGATACAAAAACATGGAGAGAATTCTTTATGCTGTTTTGCCAGGTaGTCTTTCTTTGCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: GRKCRWHLPIQKHGENSLCCFAR*SFFARR
Trigger: CCTCCGAGCAAAGAAAGACAACCTGGCAAAACAGCA...TAAAGAATTCTCTCCATGTTTTTGTATCGGGAGGTGCCATCGGCACTTCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp CTTTCGTTTACTGTTCTTCGTGAGCTTCACCACATCGTTCTGTTGTTGCTGCTGAGCTCCGTGATGCAGTaGAACATCTCTTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: LSFTVLRELHHIVLLLLLSSVMQ*NISSTL
Trigger: CAACGTGGAAGAGATGTTCAACTGCATCACGGAGCT...CAGCAGCAACAACAGAACGATGTGGTGAAGCTCACGAAGAACAGTAAACGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS-3UTR CAA 90 bp CAAAAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCTGCTGTTTTGCCAGGTaGTCTTTCTTTGCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: QKHGENSLNNGTKLRLSPCCFAR*SFFARR
Trigger: CCTCCGAGCAAAGAAAGACAACCTGGCAAAACAGCA...GGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000544304.5
CDS-3UTR CAA 90 bp CAAAAACATGGAGAGAATTCTTTAAATAACGGCACGAAACTGAGACTGTCCCCCACTCCTAGCAAACCATaGAAAAGTGGTGTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: QKHGENSLNNGTKLRLSPTPSKP*KSGVCL
Trigger: CAAACAAACACCACTTTTCAATGGTTTGCTAGGAGT...GGGGGACAGTCTCAGTTTCGTGCCGTTATTTAAAGAATTCTCTCCATGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000229340.10
CDS CAA 72 bp CCCCACCACTGCGCAGGCGCAGCGTCTGGCACCGCCTaGCGCAGCCGCAGCCTGAGCCGGCCGCGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: PHHCAGAASGTA*RSRSLSRPRPG
Trigger: ACCCGGGCGCGGCCGGCTCAGGCTGCGGCTGCGCAAGGCGGTGCCAGACGCTGCGCCTGCGCAGTGGTGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 72 bp CTCGCGTCTCCTCGGGGAGCGTCGTCGCCGCCACCCTaGGCGCTGAGAGCTTGCGGAGCCGAGCCGCTGTCG +
Preference number: 6 (lower is better)
Translates to: LASPRGASSPPP*ALRACGAEPLS
Trigger: CGACAGCGGCTCGGCTCCGCAAGCTCTCAGCGCCCAGGGTGGCGGCGACGACGCTCCCCGAGGAGACGCGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 72 bp AGCAGGAGAGGCTACTGCGGCAGCACTGACTCCCCCTaGCCGCCCGGGGCACCAACAGGGCGGGAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SRRGYCGSTDSP*PPGAPTGREGQ
Trigger: CTGGCCCTCCCGCCCTGTTGGTGCCCCGGGCGGGCAGGGGGAGTCAGTGCTGCCGCAGTAGCCTCTCCTGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543364.1
CDS GCA 72 bp GGAGCGTCGTCGCCGCCACCCTGGGCGCTGAGAGCTTaGGGAGCCGAGCCGCTGTCGAGTCCCAGCGGAAAG +
Preference number: 6 (lower is better)
Translates to: GASSPPPWALRA*GAEPLSSPSGK
Trigger: CTTTCCGCTGGGACTCGACAGCGGCTCGGCTCCGCAAGCTCTCAGCGCCCAGGGTGGCGGCGACGACGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CAA 72 bp GGGAGCGTCGTCGCCGCCACCCTGGGCGCTGAGAGCTaGCGGAGCCGAGCCGCTGTCGAGTCCCAGCGGAAA +
Preference number: 6 (lower is better)
Translates to: GSVVAATLGAES*RSRAAVESQRK
Trigger: TTTCCGCTGGGACTCGACAGCGGCTCGGCTCCGCAAGCTCTCAGCGCCCAGGGTGGCGGCGACGACGCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 72 bp GTTGGACAGAACGGGAGCTGCCGGCGGGAGCAGAGCTaGGAGGAGGTGGCCTTTGAGGGCAGCGCGGGGTCG +
Preference number: 6 (lower is better)
Translates to: VGQNGSCRREQS*EEVAFEGSAGS
Trigger: CGACCCCGCGCTGCCCTCAAAGGCCACCTCCTCGCAGCTCTGCTCCCGCCGGCAGCTCCCGTTCTGTCCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 72 bp CCCTGCGGAGAGGAAATGACAGGCACGCCGCGACCGTaGGGCGGGGCTCGCACGAGCTCCGGGTTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: PCGEEMTGTPRP*GGARTSSGFPE
Trigger: CTCTGGAAACCCGGAGCTCGTGCGAGCCCCGCCCCACGGTCGCGGCGTGCCTGTCATTTCCTCTCCGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 72 bp ACGGGAGCTGCCGGCGGGAGCAGAGCTGCGAGGAGGTaGCCTTTGAGGGCAGCGCGGGGTCGAAATCCCATC +
Preference number: 6 (lower is better)
Translates to: TGAAGGSRAARR*PLRAARGRNPI
Trigger: GATGGGATTTCGACCCCGCGCTGCCCTCAAAGGCCACCTCCTCGCAGCTCTGCTCCCGCCGGCAGCTCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 72 bp CGGTACTGGCCTCGCGATCCGCAGCTCCCTTCGGGCTaGTCCGGCAGCGGCGGATCCACTTCCCGAACAAAC +
Preference number: 6 (lower is better)
Translates to: RYWPRDPQLPSG*SGSGGSTSRTN
Trigger: GTTTGTTCGGGAAGTGGATCCGCCGCTGCCGGAGCAGCCCGAAGGGAGCTGCGGATCGCGAGGCCAGTACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534951.5
ENST00000540803.1
ENST00000544304.5
CDS GCA 72 bp GCCCTGGAGCCTGGGCTCTCACTCAGCCTCGGCAGATaGCCCCGAGCCACAACAGGCCAGCAGGAGAGGCTA +
Preference number: 6 (lower is better)
Translates to: ALEPGLSLSLGR*PRATTGQQERL
Trigger: TAGCCTCTCCTGCTGGCCTGTTGTGGCTCGGGGGCATCTGCCGAGGCTGAGTGAGAGCCCAGGCTCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543364.1
CDS CAA 72 bp GCCCAAGGTGCCGGAGAAGCCCGGTCGTGGACGTTGTaGCTCCCTCATCTTCGAGACCCGCACGCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: AQGAGEARSWTL*LPHLRDPHALR
Trigger: CCGCAGGGCGTGCGGGTCTCGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 72 bp CCCAAGGTGCCGGAGAAGCCCGGTCGTGGACGTTGTTaGTCCCTCATCTTCGAGACCCGCACGCCCTGCGGA +
Preference number: 6 (lower is better)
Translates to: PKVPEKPGRGRC*SLIFETRTPCG
Trigger: TCCGCAGGGCGTGCGGGTCTCGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 72 bp AGCCGCTGTCGAGTCCCAGCGGAAAGAAGCCCAAGGTaGCGGAGAAGCCCGGTCGTGGACGTTGTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: SRCRVPAERSPR*RRSPVVDVVAP
Trigger: GGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGCTTCTTTCCGCTGGGACTCGACAGCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CAA 72 bp GAAGCCCAAGGTGCCGGAGAAGCCCGGTCGTGGACGTaGTTGCTCCCTCATCTTCGAGACCCGCACGCCCTG +
Preference number: 6 (lower is better)
Translates to: EAQGAGEARSWT*LLPHLRDPHAL
Trigger: CAGGGCGTGCGGGTCTCGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CAA 90 bp CAGCGGAAAGAAGCCCAAGGTGCCGGAGAAGCCCGGTCGTGGACGTaGTTGCTCCCTCATCTTCGAGACCCGCACGCCCTGCGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: QRKEAQGAGEARSWT*LLPHLRDPHALRRG
Trigger: TCCTCTCCGCAGGGCGTGCGGGTCTCGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGCTTCTTTCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CAA 90 bp CGGAAAGAAGCCCAAGGTGCCGGAGAAGCCCGGTCGTGGACGTTGTaGCTCCCTCATCTTCGAGACCCGCACGCCCTGCGGAGAGGAAAT +
Preference number: 6 (lower is better)
Translates to: RKEAQGAGEARSWTL*LPHLRDPHALRRGN
Trigger: ATTTCCTCTCCGCAGGGCGTGCGGGTCTCGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGCTTCTTTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS GCA 72 bp TCCCATCCCAGCGCTGTGACCTCTTGGAGCCCACATTaGCTCTTTGGTGGAGGGGAGGGAGTGGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: SHPSAVTSWSPH*LFGGGEGVVQL
Trigger: GAGCTGGACCACTCCCTCCCCTCCACCAAAGAGGCAATGTGGGCTCCAAGAGGTCACAGCGCTGGGATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 72 bp GCGGGGTCGAAATCCCATCCCAGCGCTGTGACCTCTTaGAGCCCACATTGCCTCTTTGGTGGAGGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: AGSKSHPSAVTS*SPHCLFGGGEG
Trigger: TCCCTCCCCTCCACCAAAGAGGCAATGTGGGCTCCAAGAGGTCACAGCGCTGGGATGGGATTTCGACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS CCA 72 bp CGGAAAGAAGCCCAAGGTGCCGGAGAAGCCCGGTCGTaGACGTTGTTGCTCCCTCATCTTCGAGACCCGCAC +
Preference number: 6 (lower is better)
Translates to: RKEAQGAGEARS*TLLLPHLRDPH
Trigger: GTGCGGGTCTCGAAGATGAGGGAGCAACAACGTCCACGACCGGGCTTCTCCGGCACCTTGGGCTTCTTTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS TCA 72 bp GGCCACACACCAAGAACATCTCTTCCACTCGATCCCTaGCCTTTTCCTTCGTCCTTGTGTAAGACAAGCTGC +
Preference number: 6 (lower is better)
Translates to: GHTPRTSLPLDP*PFPSSLCKTSC
Trigger: GCAGCTTGTCTTACACAAGGACGAAGGAAAAGGTCAGGGATCGAGTGGAAGAGATGTTCTTGGTGTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544304.5
CDS TCA 72 bp ATTCGGCACACATCATCACAGTTCTGGTTGATTTCGTaGAGCCACCGCTTGACGTTGACAAAGGACTCGGCA +
Preference number: 6 (lower is better)
Translates to: IRHTSSQFWLIS*SHRLTLTKDSA
Trigger: TGCCGAGTCCTTTGTCAACGTCAAGCGGTGGCTTCACGAAATCAACCAGAACTGTGATGATGTGTGCCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229340.10
ENST00000534951.5
ENST00000538903.1
ENST00000540803.1
ENST00000543364.1
ENST00000544304.5