RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB34 (Homo sapiens)

Ensembl gene IDs: ENSG00000109113

Ensembl transcript IDs: ENST00000301043.10, ENST00000353676.9, ENST00000395243.7, ENST00000395245.9, ENST00000412625.5, ENST00000415040.6, ENST00000419712.7, ENST00000422279.6, ENST00000430132.6, ENST00000436730.7, ENST00000450529.5, ENST00000453384.7, ENST00000474704.1, ENST00000481501.1, ENST00000482688.5, ENST00000483554.1, ENST00000496866.1, ENST00000580843.6, ENST00000582934.1, ENST00000583538.5, ENST00000625712.2, ENST00000636154.2, ENST00000636513.1, ENST00000636534.2, ENST00000636772.1

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGACGCGATCCCTCCGCACGGGTGCCAGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCTGAGAAGGCGCCGAGGCCGGATCCG +
Preference number: 1 (lower is better)
Translates to: QDAIPPHGCQNVHPA*GLAGRPEKAPRPDP
Trigger: CGGATCCGGCCTCGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR GCA 90 bp CAGGCACTGGGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCTGAG +
Preference number: 1 (lower is better)
Translates to: QALGQLRQDAIPPHG*QNVHPACGLAGRPE
Trigger: CTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCCCAGTGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR CCA 90 bp GGGTACTCAGATCCTTCTTGGAACCTACAAGGAAGAGAAGCACACTaGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGG +
Preference number: 1 (lower is better)
Translates to: GYSDPSWNLQGREAH*KGHSPSGHRPATAW
Trigger: CCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636513.1
3UTR CCA 90 bp TACCCCTCTGTGGGAATACTGCCACCAAGAGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAA +
Preference number: 1 (lower is better)
Translates to: YPSVGILPPRGSSLV*IKSVQMSRGQALEE
Trigger: TTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCTCCCTCACTACCACTaGGCGCCCTGGACAGTCCCC +
Preference number: 2 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGLPHYH*APWTVP
Trigger: GGGGACTGTCCAGGGCGCCCAGTGGTAGTGAGGGAG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 2 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGLWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCAAGCTCTGGAGGAATaGGGGTGGCACAGTGCCCTA +
Preference number: 2 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGQALEE*GWHSAL
Trigger: TAGGGCACTGTGCCACCCTCATTCCTCCAGAGCTTG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR GCA 90 bp TTGCTGTCATCACTGTTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATCAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: LLSSLLMRTTSPMRRAPDQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...ATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAACAGTGATGACAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
3UTR-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCTCCCTCACTACCACTaGGCGCCCTGGACAGTCCCC +
Preference number: 2 (lower is better)
Translates to: HSERLESLSILKHKGPSRLPHYH*APWTVP
Trigger: GGGGACTGTCCAGGGCGCCCAGTGGTAGTGAGGGAG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGATGCATAAGGCACAGTaGGAGGCTGGAATCATTAAG +
Preference number: 2 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGMHKAQ*EAGIIK
Trigger: CTTAATGATTCCAGCCTCTCACTGTGCCTTATGCAT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR GCA 90 bp CGGACATTCTCACCAGTGAGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: RTFSPVRDETAQYSAFISMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...GGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAGAATGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
3UTR-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 2 (lower is better)
Translates to: HSERLESLSILKHKGPSRLWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: IRHSERLESLSILKHKGPGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCTCCCTCACTACCACTaGGCGCCCTGGACAGTCCCC +
Preference number: 2 (lower is better)
Translates to: IRHSERLESLSILKHKGPLPHYH*APWTVP
Trigger: GGGGACTGTCCAGGGCGCCCAGTGGTAGTGAGGGAG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR CAA 90 bp CCCAGCTACCCCTCTGTGGGAATACTGCCACCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: PSYPSVGILPPRGSS*VWIKSVQMSRGQAL
Trigger: CAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR TCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCAAGCTCTGGAGGAATaGGGGTGGCACAGTGCCCTA +
Preference number: 2 (lower is better)
Translates to: HSERLESLSILKHKGPSRQALEE*GWHSAL
Trigger: TAGGGCACTGTGCCACCCTCATTCCTCCAGAGCTTG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR TCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCAAGCTCTGGAGGAATaGGGGTGGCACAGTGCCCTA +
Preference number: 2 (lower is better)
Translates to: RHSERLESLSILKHKGPSQALEE*GWHSAL
Trigger: TAGGGCACTGTGCCACCCTCATTCCTCCAGAGCTTG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp ACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 2 (lower is better)
Translates to: TLEGSFSFRASASHCLVCAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...ACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
3UTR-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 2 (lower is better)
Translates to: HSERLESLSILKHKGPSRPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 2 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQLWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: IRHSERLESLSILKHKGPMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: IRHSERLESLSILKHKGPQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 2 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAG +
Preference number: 2 (lower is better)
Translates to: RHSERLESLSILKHKGPSPATPL*EYCHQE
Trigger: CTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR TCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAAAGGGCCCAGCAGGCTaGGCAAAAGAACAGAGACAC +
Preference number: 2 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGKGPAG*AKEQRH
Trigger: GTGTCTCTGTTCTTTTGCTCAGCCTGCTGGGCCCTT...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: HSERLESLSILKHKGPSRPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 2 (lower is better)
Translates to: IRHSERLESLSILKHKGPPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR TCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGATTCTCACTCACCAGTaGGAGATGAGACTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRILTHQ*EMRLPS
Trigger: ACTGGGCAGTCTCATCTCTCACTGGTGAGTGAGAAT...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422279.6
3UTR-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: IRHSERLESLSILKHKGPPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATG +
Preference number: 2 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGGSSLV*IKSVQM
Trigger: CATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATG +
Preference number: 2 (lower is better)
Translates to: IRHSERLESLSILKHKGPGSSLV*IKSVQM
Trigger: CATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR GCA 72 bp GGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GQLRQDAIPPHG*QNVHPACGLAG
Trigger: CCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR TCA 72 bp CCACGGTGCCTGTCCGGTGCTCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTTTGTGCCCGTGCAAAG +
Preference number: 3 (lower is better)
Translates to: PRCLSGAPGRRR*RGGGSLCARAK
Trigger: CTTTGCACGGGCACAAAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR GCA 72 bp ATCCCTCCGCACGGGTGCCAGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCTGAGAAGGCGCCGAGG +
Preference number: 3 (lower is better)
Translates to: IPPHGCQNVHPA*GLAGRPEKAPR
Trigger: CCTCGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR-3UTR CAA 90 bp GAGATCTTAAATCTGCCCACGGTGCCTGTCCGGTGCTCCTGGCAGGCGCAGGTGCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 3 (lower is better)
Translates to: EILNLPTVPVRCSWQAQVRGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGCAGATTTAAGATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR GCA 72 bp TTGGAGATCTTAAATCTGCCCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTGACGCGGGGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: LEILNLPTVPVR*SWQAQVTRGWK
Trigger: CTTCCACCCCCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGCAGATTTAAGATCTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR-3UTR CAA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 3 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR-3UTR CAA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGGGGCATCCAGTCTTaGGCACGGTGCCTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGGGIQS*ARCLGA
Trigger: TGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCCC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR CCA 72 bp AGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCTaGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCA +
Preference number: 3 (lower is better)
Translates to: RDETAQYSAFIS*ATWRASFSISA
Trigger: TGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
3UTR-3UTR CAA 90 bp GTGAGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGCCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 3 (lower is better)
Translates to: VRDETAQYSAFISWATWRPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...CCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
3UTR CCA 72 bp CAGGAAGTGACTAGCATGATCCCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAGGCAGCTCTTTGGTCT +
Preference number: 3 (lower is better)
Translates to: QEVTSMIPATPL*EYCHQEAALWS
Trigger: AGACCAAAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGGGATCATGCTAGTCACTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR CCA 72 bp GATCCTTCTTGGAACCTACAAGGAAGAGAAGCACACTaGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCC +
Preference number: 3 (lower is better)
Translates to: DPSWNLQGREAH*KGHSPSGHRPA
Trigger: GGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTGTAGGTTCCAAGAAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636513.1
3UTR-3UTR CAA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 3 (lower is better)
Translates to: HSERLESLSILKHKGPSRPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR CCA 72 bp GTGGGAATACTGCCACCAAGAGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCT +
Preference number: 3 (lower is better)
Translates to: VGILPPRGSSLV*IKSVQMSRGQA
Trigger: AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGGTGGCAGTATTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR CCA 72 bp TCAGCGCATACTGAGCAGGGGTACTCAGATCCTTCTTaGAACCTACAAGGAAGAGAAGCACACTGGAAGGGT +
Preference number: 3 (lower is better)
Translates to: SAHTEQGYSDPS*NLQGREAHWKG
Trigger: ACCCTTCCAGTGTGCTTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTACCCCTGCTCAGTATGCGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636513.1
3UTR-3UTR CAA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 3 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
3UTR-3UTR CAA 90 bp CGGACATTCTCACCAGTGAGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 3 (lower is better)
Translates to: RTFSPVRDETAQYSAFISLSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...GGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAGAATGTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CCA 90 bp ATCCTGCCTGCGGCCTTGCAGGGCGCCCTGAGAAGGCGCCGAGGCCGGATCCGCCAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: ILPAALQGALRRRRGRIRQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...GCGGATCCGGCCTCGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR CAA 72 bp CGCACGGGTGCCAGAATGTTCATCCTGCCTGCGGCCTaGCAGGGCGCCCTGAGAAGGCGCCGAGGCCGGATC +
Preference number: 4 (lower is better)
Translates to: RTGARMFILPAA*QGALRRRRGRI
Trigger: GATCCGGCCTCGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR TCA 90 bp GGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTGCCAGAATGTTCATCCTCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GQLRQDAIPPHGCQNVHPPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...AGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR GCA 90 bp TTCCTCAGGCACTGGGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTGCCGGAATCGGAGACTGCTaGGCAGCATCTGGCGATGCC +
Preference number: 4 (lower is better)
Translates to: FLRHWGSSARTRSLRTGAGIGDC*AASGDA
Trigger: GGCATCGCCAGATGCTGCGCAGCAGTCTCCGATTCC...GGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR GCA 90 bp AATCTGCCCACGGTGCCTGTCCGGTGCTCCTGGCAGGCGCAGGTGACGCGGGGGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: NLPTVPVRCSWQAQVTRGNVHPA*GLAGRP
Trigger: AGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...CCCCCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGCAGATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGSDPGA*RPDDHP
Trigger: CGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCCTGTCCGGTGCTCCTaGCAGGCGCAGGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGPVRCS*QAQVTR
Trigger: CCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCGCGGGCCACGGAGATaGAACAATCACCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGRGPRR*NNHPGP
Trigger: CGGCCCCGGGTGATTGTTTCATCTCCGTGGCCCGCG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000395245.9
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGTVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTGAGCAGGGGTAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCG +
Preference number: 4 (lower is better)
Translates to: LLGHLEGVFLHQRILSRGSDPGA*RPDDHP
Trigger: CGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCT...ACCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CCA 90 bp GGAGATCTTAAATCTGCCCACGGTGCCTGTCCGGTGCTCCTGGCAGGCGCAGGTCCTGTCCGGTGCTCCTaGCAGGCGCAGGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: GDLKSAHGACPVLLAGAGPVRCS*QAQVTR
Trigger: CCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGG...ACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGCAGATTTAAGATCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
3UTR CAA 72 bp TCCTGGCAGGCGCAGGTGACGCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCCTCCTTCCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SWQAQVTRGWKS*CPCKAASFLRH
Trigger: GTGCCTGAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGTGGAGGGGAAGCGTaGGAAGGGGGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGGGEA*EGGARV
Trigger: AACCCTGGCACCCCCTTCGCACGCTTCCCCTCCACC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGTCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGSFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CACGGGTGCCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCTGAGAAGTCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: HGCQNVHPACGLAGRPEKSFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...CTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR TCA 90 bp GATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: DETAQYSAFISWATWRASPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGGCTGGGCAGTCTCTaGACAGTCTCCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGLGSL*TVSSAL
Trigger: GAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp GATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTCGCGGGCCACGGAGATaGAACAATCACCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: DETAQYSAFISWATWRASRGPRR*NNHPGP
Trigger: CGGCCCCGGGTGATTGTTTCATCTCCGTGGCCCGCG...AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp TGGGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTGCCAGAATGTTCATCGGGTGGAAGTCTTTGTaGCCGTGCAAAGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGSSARTRSLRTGARMFIGWKSL*PCKAAS
Trigger: GGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCC...GATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR GCA 90 bp AGGGCTGGGCAGTCTCTGAACAGTCTCCTCAGCCCTCATGGGCAACATGTGGGCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RAGQSLNSLLSPHGQHVGTVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...GCCCACATGTTGCCCATGAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR GCA 90 bp ACCTTGGAGATCTTAAATCTGCCCACGGTGCCTGTCCGGTGCTCCTGGCAGGCGACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLEILNLPTVPVRCSWQATVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...CGCCTGCCAGGAGCACCGGACAGGCACCGTGGGCAGATTTAAGATCTCCAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR CCA 90 bp AGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCG +
Preference number: 4 (lower is better)
Translates to: STQPSSPGPPGGRLSPSASDPGA*RPDDHP
Trigger: CGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCT...CGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp ACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATCGCGGGCCACGGAGATaGAACAATCACCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: TQPSSPGPPGGRLSPSAHRGPRR*NNHPGP
Trigger: CGGCCCCGGGTGATTGTTTCATCTCCGTGGCCCGCG...ATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp GGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTGCCAGAATGTTCATCCTGTGGGGAATCGGAGACTaGTGCGCAGCATCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: GSSARTRSLRTGARMFILWGIGD*CAASGD
Trigger: ATCGCCAGATGCTGCGCAGCAGTCTCCGATTCCCCA...CAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGNVHPA*GLAGRP
Trigger: AGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGGTGGAAGTCTTTGTaGCCGTGCAAAGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGWKSL*PCKAAS
Trigger: GGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp GATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DETAQYSAFISWATWRASGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CCA 90 bp AGGGCTGGGCAGTCTCTGAACAGTCTCCTCAGCCCTCATGGGCAACATGTGGGCCTCCCTCACTACCACTaGGCGCCCTGGACAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RAGQSLNSLLSPHGQHVGLPHYH*APWTVP
Trigger: GGGGACTGTCCAGGGCGCCCAGTGGTAGTGAGGGAG...GCCCACATGTTGCCCATGAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp ACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCTCTTCGGCCGCCAATTaGGGGCGGGGAGTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: TAQYSAFISWATWRASFSSSAAN*GRGVPS
Trigger: AGACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGA...GGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGGCTGGGCAGTCTCTaGACAGTCTTCATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGLGSL*TVFISW
Trigger: CCAGGAGATGAAGACTGTTCAGAGACTGCCCAGCCC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGTGGGGAATCGGAGACTaGTGCGCAGCATCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGWGIGD*CAASGD
Trigger: ATCGCCAGATGCTGCGCAGCAGTCTCCGATTCCCCA...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301043.10
ENST00000415040.6
ENST00000453384.7
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTGCCAGAATGTTCATCCTGCCAAGTCTTTGTGCCCGTaGAAAGCGGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QLRQDAIPPHGCQNVHPAKSLCP*KAASFL
Trigger: GAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTT...GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR CCA 90 bp CACCGACAGGTCCCCCACCACAATGACCTTGGAGATCTTAAATCTGCCCACGGTAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCG +
Preference number: 4 (lower is better)
Translates to: HRQVPHHNDLGDLKSAHGSDPGA*RPDDHP
Trigger: CGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCT...ACCGTGGGCAGATTTAAGATCTCCAAGGTCATTGTGGTGGGGGACCTGTCGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR CCA 90 bp GCCCTCATGGGCAACATGTGGGCTTCTTCTTGCTGGCAGTTAGGTAGAGGTTGCCCTGTCCGGTGCTCCTaGCAGGCGCAGGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: ALMGNMWASSCWQLGRGCPVRCS*QAQVTR
Trigger: CCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGG...GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACATGTTGCCCATGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp TCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTCTTCGGCCGCCAATTaGGGGCGGGGAGTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: SAFISWATWRASFSISAYSSAAN*GRGVPS
Trigger: AGACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGA...GTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGACAGTCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGTVFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGACTGT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp TTGCTGTCATCACTGTTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LLSSLLMRTTSPMRRAPDPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...ATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAACAGTGATGACAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGTCCATCAGCGCATACTaGGCAGGGGTACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGSISAY*AGVLRS
Trigger: GGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGA...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCTCACCAGTGAGAGATaGGACTGCCCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGLTSER*DCPVLS
Trigger: GCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGAAGGGCCCAGCAGGCTaGGCAAAAGAACAGAGACAC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGKGPAG*AKEQRH
Trigger: GTGTCTCTGTTCTTTTGCTCAGCCTGCTGGGCCCTT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp TCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTGAGCAGGGGACGTCATCTCGGGGCTaGGGCTGCCCTACCATTACA +
Preference number: 4 (lower is better)
Translates to: SPGPPGGRLSPSAHTEQGTSSRG*GCPTIT
Trigger: TGTAATGGTAGGGCAGCCTCAGCCCCGAGATGACGT...CCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp CTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTGAGCAGGGGTATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLGHLEGVFLHQRILSRGIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...ACCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGAAGTCTTTGTGCCCGTaGAAAGCGGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGKSLCP*KAASFL
Trigger: GAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGACAACATCCCCAATaGGTCGAGCCCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGQHPQ*VEPPIS
Trigger: AGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AACCTATTAATGAGGCAAGTCTTCCCCACCGACAGGTCCCCCACCACAATGACCAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCG +
Preference number: 4 (lower is better)
Translates to: NLLMRQVFPTDRSPTTMTSDPGA*RPDDHP
Trigger: CGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCT...GGTCATTGTGGTGGGGGACCTGTCGGTGGGGAAGACTTGCCTCATTAATAGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636154.2
ENST00000636534.2
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCGGCCAGCCACTGCTTaGTATGTTCCAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGRPATA*YVPEMP
Trigger: TGGCATCTCTGGAACATACCAAGCAGTGGCTGGCCG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTGAGCAGGGGTATCTCCTGGGCCACCTaGAGGGCGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LLGHLEGVFLHQRILSRGISWAT*RASFSI
Trigger: GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT...ACCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGPATPL*EYCHQE
Trigger: CTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCCCCTCTCGCCCTTCTaGCCTGGGAGGTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRPLSPF*PGRSGV
Trigger: CACCCCCGACCTCCCAGGGCAGAAGGGCGAGAGGGG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR GCA 90 bp ACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TQPSSPGPPGGRLSPSAHPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...ATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp CTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LSLHLLGHLEGVFLHQRIPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...TATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp AGGGCTGGGCAGTCTCTGAACAGTCTCCTCAGCCCTCATGGGCAACATGTGGGCATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RAGQSLNSLLSPHGQHVGIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...GCCCACATGTTGCCCATGAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR GCA 90 bp TCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACCAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: SAFISWATWRASFSISAYQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...GTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCG +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRSDPGA*RPDDHP
Trigger: CGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCT...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRSDPGA*RPDDHP
Trigger: CGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCT...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR CCA 90 bp AGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACACCTGTCCGGTGCTCCTaGCAGGCGCAGGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: STLASKVSAATRKKNSRTPVRCS*QAQVTR
Trigger: CCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGG...TGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCTGTCCGGTGCTCCTaGCAGGCGCAGGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRPVRCS*QAQVTR
Trigger: CCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp GACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCATCTCCTGGGCCACCTaGAGGGCGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: DCPVLSLHLLGHLEGVFLISWAT*RASFSI
Trigger: GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT...GAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CCA 90 bp TTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATTTCTCCAGCTCAGCCTCAGCCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LMRTTSPMRRAPDFSSSASAFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA...GGCTGAGCTGGAGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCTCATGGGCAACATGTaGGCTTCTTCTTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGLMGNM*ASSCWQ
Trigger: CTGCCAGCAAGAAGAAGCCCACATGTTGCCCATGAG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp TGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 4 (lower is better)
Translates to: CPVLSLHLLGHLEGVFLHLWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...ATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CCA 90 bp ACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTCCTCCCTCACTACCACTaGGCGCCCTGGACAGTCCCC +
Preference number: 4 (lower is better)
Translates to: TGRVILLQGIGQPLLGMFLPHYH*APWTVP
Trigger: GGGGACTGTCCAGGGCGCCCAGTGGTAGTGAGGGAG...GAACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CCA 90 bp GTGAGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGTGTCTTTGCAGAACCTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: VRDETAQYSAFISWATWRCLCRT*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGGTTCTGCAAAGACA...CCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR TCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp AGGGCTGGGCAGTCTCTGAACAGTCTCCTCAGCCCTCATGGGCAACATGTGGGCAAGGGCCCAGCAGGCTaGGCAAAAGAACAGAGACAC +
Preference number: 4 (lower is better)
Translates to: RAGQSLNSLLSPHGQHVGKGPAG*AKEQRH
Trigger: GTGTCTCTGTTCTTTTGCTCAGCCTGCTGGGCCCTT...GCCCACATGTTGCCCATGAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR TCA 90 bp ACAAGGAAGAGAAGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCTGGGCGTCCCGAAGATaGCTCTGGGGCGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: TRKRSTLEGSFSFRASASWASRR*LWGEET
Trigger: AGTCTCCTCGCCCCAGAGTCATCTTCGGGACGCCCA...GCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR GCA 90 bp CCTGGAGGGCGTCTTTCTCCATCAGCGCATACTGAGCAGGGGTACTCAGATCCTAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PGGRLSPSAHTEQGYSDPNVHPA*GLAGRP
Trigger: AGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...AGGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR GCA 90 bp CTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATAATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LSLHLLGHLEGVFLHQRIIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...TATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRTVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSTVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGTCCTGCCTGCGGCCTTaGAGGGCGCCCCAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRSCLRP*RAPQPN
Trigger: ATTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCAGGA...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCTCCTGCCTGCGGCCTTaGAGGGCGCCCCAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSSCLRP*RAPQPN
Trigger: ATTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCAGGA...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACCTGTCCGGTGCTCCTaGCAGGCGCAGGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGPVRCS*QAQVTR
Trigger: CCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTCCTGTCCGGTGCTCCTaGCAGGCGCAGGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSPVRCS*QAQVTR
Trigger: CCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGG...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGTGGGCTTCTTCTTGCTaGCAGTTAGGTAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGWASSC*QLGRGC
Trigger: GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCA...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp GGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCACCTGGGCGTCCCGAAGATaGCTCTGGGGCGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: GLKGQCCHTEEEFSDILTWASRR*LWGEET
Trigger: AGTCTCCTCGCCCCAGAGTCATCTTCGGGACGCCCA...GGTGAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR TCA 90 bp CGCATACTGAGCAGGGGTACTCAGATCCTTCTTGGAACCTACAAGGAAGAGAAGCGCGGGCCACGGAGATaGAACAATCACCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RILSRGTQILLGTYKEEKRGPRR*NNHPGP
Trigger: CGGCCCCGGGTGATTGTTTCATCTCCGTGGCCCGCG...CTTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTACCCCTGCTCAGTATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR GCA 90 bp CGACAGGTCCCCCACCACAATGACCTTGGAGATCTTAAATCTGCCCACGGTGCCATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQVPHHNDLGDLKSAHGAIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...GGCACCGTGGGCAGATTTAAGATCTCCAAGGTCATTGTGGTGGGGGACCTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQATVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp ATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IGLKGQCCHTEEEFSDILTVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...GAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR GCA 90 bp GACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: DCPVLSLHLLGHLEGVFLAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...GAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp GCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCGGCCTCAAAGGTCAGTaGTGCCACACGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: AQYSAFISWATWRASFSIGLKGQ*CHTEEE
Trigger: TTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCC...GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp TCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACGGACAACATCCCCAATaGGTCGAGCCCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: SAFISWATWRASFSISAYGQHPQ*VEPPIS
Trigger: AGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCC...GTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGATGTGGGCTTCTTCTTaGTGGCAGTTAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGMWASS*WQLGRG
Trigger: ACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACAT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGTGCAGAACCCCACGGTaGCTGTCCGGTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRCRTPR*LSGAPG
Trigger: GCCAGGAGCACCGGACAGGCACCGTGGGGTTCTGCA...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415040.6
CDS-3UTR GCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTTCCTGCCTGCGGCCTTaGAGGGCGCCCCAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSSCLRP*RAPQPN
Trigger: ATTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCAGGA...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450529.5
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCTCGCCCTTCTGCCCTaGGAGGTCGGGGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRLALLP*EVGGED
Trigger: ATCCTCACCCCCGACCTCCCAGGGCAGAAGGGCGAG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCG +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPSDPGA*RPDDHP
Trigger: CGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGTCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRSFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCTCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSSFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp GGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTGAGCAGGGGTAAGGAACGGCCAGCCACTGCTTaGTATGTTCCAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: GHLEGVFLHQRILSRGKERPATA*YVPEMP
Trigger: TGGCATCTCTGGAACATACCAAGCAGTGGCTGGCCG...TTCCTTACCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CCA 90 bp GCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATATCTCCTGGGCCACCTaGAGGGCGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: AHWKGHSPSGHRPATAWYISWAT*RASFSI
Trigger: GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT...ATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CCA 90 bp CCTACAAGGAAGAGAAGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCTCAGCCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: PTRKRSTLEGSFSFRASASAFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA...GGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR CCA 90 bp GCAGGGGTAAGGAAGAGAAGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGTCAGCCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: AGVRKRSTLEGSFSFRASSAFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA...CGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTACCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CCA 90 bp TGCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATGCTCAGCCAGCACATTaGCCTCAAAGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: CPVLSLHLLGHLEGVFLHAQPAH*PQRSVL
Trigger: CAGCACTGACCTTTGAGGCCAATGTGCTGGCTGAGC...ATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CTGAAGGGAATGCCCAGCACCTCAAATCGTTCCATCTCGAAGTCCACTCCAATGTCTTCGGCCGCCAATTaGGGGCGGGGAGTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: LKGMPSTSNRSISKSTPMSSAAN*GRGVPS
Trigger: AGACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGA...CATTGGAGTGGACTTCGAGATGGAACGATTTGAGGTGCTGGGCATTCCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR TCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGGGGCTGGGCAGTCTCTaGACAGTCTCCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRGLGSL*TVSSAL
Trigger: GAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCC...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATGGGCGTCCCGAAGATaGCTCTGGGGCGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: STLASKVSAATRKKNSRTWASRR*LWGEET
Trigger: AGTCTCCTCGCCCCAGAGTCATCTTCGGGACGCCCA...TGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCGCAGCATCTGGCGATaGCAGGAACCAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSRSIWR*QEPAGR
Trigger: CCTCCCTGCTGGTTCCTGGCATCGCCAGATGCTGCG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000453384.7
CDS-3UTR GCA 90 bp AACCTATTAATGAGGCAAGTCTTCCCCACCGACAGGTCCCCCACCACAATGACCCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: NLLMRQVFPTDRSPTTMTPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...GGTCATTGTGGTGGGGGACCTGTCGGTGGGGAAGACTTGCCTCATTAATAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636154.2
ENST00000636534.2
CDS-3UTR GCA 90 bp GCCAGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: ASTLASKVSAATRKKNSRIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...CCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000422279.6
ENST00000636772.1
CDS-3UTR GCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMTVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPTVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATAGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: LSLHLLGHLEGVFLHQRIAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...TATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp CTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACATTTGAACCTCTCCTaGCCAGCGGTATCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LSLHLLGHLEGVFLHQRIHLNLS*PAVSQS
Trigger: GCTTTGGGATACCGCTGGGCAGGAGAGGTTCAAATG...TATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRNVHPA*GLAGRP
Trigger: GGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp GCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCTATCAAAGGTGTCTTTaGAGAACCTGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQYSAFISWATWRASFSIYQRCL*RTWGSS
Trigger: GGAGCTGCCCCAGGTTCTGCAAAGACACCTTTGATA...GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAATCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQSFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTTCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQASFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGATCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGSFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp GTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTCCAGAGATGCCCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VILLQGIGQPLLGMFQRCPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...GCATCTCTGGAACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGSSLV*IKSVQM
Trigger: CATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp ACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCGGGGCATCCAGTCTTTaGCACGGTGCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TLASKVSAATRKKNSRTFGASSL*HGAWGQ
Trigger: CTGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCC...GAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTCTCCCTCACTACCACTaGGCGCCCTGGACAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSLPHYH*APWTVP
Trigger: GGGGACTGTCCAGGGCGCCCAGTGGTAGTGAGGGAG...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCTCCCTCACTACCACTaGGCGCCCTGGACAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALELPHYH*APWTVP
Trigger: GGGGACTGTCCAGGGCGCCCAGTGGTAGTGAGGGAG...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTTCCAGGCCTGGGAGGTaGCTCATAGAGTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQASRPGR*LIESAP
Trigger: GGGGGCAGACTCTATGAGTCACCTCCCAGGCCTGGA...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR TCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCGCCAGCCGAATTGGTaGTGGGGAATCGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRRQPNW*WGIGDC
Trigger: GCAGTCTCCGATTCCCCATCACCAATTCGGCTGGCG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000415040.6
CDS-3UTR TCA 90 bp GAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTCCAGACTCACCAGTGAGAGATaGGACTGCCCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: EGSFSFRASASHCLVCSRLTSER*DCPVLS
Trigger: GCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAG...TCTGGAACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR TCA 90 bp CACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGGGACATTCTCACCAGTaGGAGATGAGACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HTGRVILLQGIGQPLLGMGHSHQ*EMRLPS
Trigger: ACTGGGCAGTCTCATCTCTCACTGGTGAGAATGTCC...CATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR TCA 90 bp ACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCGGGCTGGGCAGTCTCTaGACAGTCTCCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TLASKVSAATRKKNSRTFGLGSL*TVSSAL
Trigger: GAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCC...GAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR TCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGGCTGGGCAGTCTCTaGACAGTCTCCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSGLGSL*TVSSAL
Trigger: GAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCC...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCCCAGCCGAATTGGTaGTGGGGAATCGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRPQPNW*WGIGDC
Trigger: GCAGTCTCCGATTCCCCATCACCAATTCGGCTGGGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCCCCAGCCGAATTGGTaGTGGGGAATCGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSPQPNW*WGIGDC
Trigger: GCAGTCTCCGATTCCCCATCACCAATTCGGCTGGGG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGGAATCGGAGACTGCTaGGCAGCATCTGGCGATGCC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSGIGDC*AASGDA
Trigger: GGCATCGCCAGATGCTGCGCAGCAGTCTCCGATTCC...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301043.10
ENST00000415040.6
ENST00000453384.7
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSNVHPA*GLAGRP
Trigger: AGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AACCTATTAATGAGGCAAGTCTTCCCCACCGACAGGTCCCCCACCACAATGACCATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: NLLMRQVFPTDRSPTTMTIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...GGTCATTGTGGTGGGGGACCTGTCGGTGGGGAAGACTTGCCTCATTAATAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636154.2
ENST00000636534.2
CDS-3UTR GCA 90 bp AGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACAGGGTGGAAGTCTTTGTaGCCGTGCAAAGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: STLASKVSAATRKKNSRTGWKSL*PCKAAS
Trigger: GGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCC...TGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGGGTGGAAGTCTTTGTaGCCGTGCAAAGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRGWKSL*PCKAAS
Trigger: GGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGGGTGGAAGTCTTTGTaGCCGTGCAAAGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSGWKSL*PCKAAS
Trigger: GGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCC...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGCATTTGAACCTCTCCTaGCCAGCGGTATCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HTGRVILLQGIGQPLLGMHLNLS*PAVSQS
Trigger: GCTTTGGGATACCGCTGGGCAGGAGAGGTTCAAATG...CATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCTGCTGCGCAGCATCTaGCGATGCCAGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSLLRSI*RCQEPA
Trigger: TGCTGGTTCCTGGCATCGCCAGATGCTGCGCAGCAG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000453384.7
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCTGCTGCGCAGCATCTaGCGATGCCAGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRLLRSI*RCQEPA
Trigger: TGCTGGTTCCTGGCATCGCCAGATGCTGCGCAGCAG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000453384.7
CDS-3UTR CCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGTCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMSFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp TTCTCACCAGTGAGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCCGGCCAGCCACTGCTTaGTATGTTCCAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: FSPVRDETAQYSAFISWARPATA*YVPEMP
Trigger: TGGCATCTCTGGAACATACCAAGCAGTGGCTGGCCG...GGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGTCAGCCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRSAFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRLWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGTCTTCGGCCGCCAATTaGGGGCGGGGAGTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMSSAAN*GRGVPS
Trigger: AGACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGA...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000395245.9
CDS-3UTR TCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGTGCCAGGGTTAGAATaGGGTGCCCACCGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAVPGLE*GAHRGE
Trigger: CTCTCCTCGGTGGGCACCTCATTCTAACCCTGGCAC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR TCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACGCCAGCCGAATTGGTaGTGGGGAATCGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGRQPNW*WGIGDC
Trigger: GCAGTCTCCGATTCCCCATCACCAATTCGGCTGGCG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000415040.6
CDS-3UTR TCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGTCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGSSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp AACCTATTAATGAGGCAAGTCTTCCCCACCGACAGGTCCCCCACCACAATGACCCTCACCAGTGAGAGATaGGACTGCCCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: NLLMRQVFPTDRSPTTMTLTSER*DCPVLS
Trigger: GCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAG...GGTCATTGTGGTGGGGGACCTGTCGGTGGGGAAGACTTGCCTCATTAATAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR TCA 90 bp GCAGGGGTAAGGAAGAGAAGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGGACATTCTCACCAGTaGGAGATGAGACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: AGVRKRSTLEGSFSFRASGHSHQ*EMRLPS
Trigger: ACTGGGCAGTCTCATCTCTCACTGGTGAGAATGTCC...CGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTACCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR TCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGGGGCTGGGCAGTCTCTaGACAGTCTCCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMGLGSL*TVSSAL
Trigger: GAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCC...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGTGGGCGTCCCGAAGATaGCTCTGGGGCGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMWASRR*LWGEET
Trigger: AGTCTCCTCGCCCCAGAGTCATCTTCGGGACGCCCA...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000395245.9
CDS-3UTR TCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGGGCTGGGCAGTCTCTaGACAGTCTTCATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRGLGSL*TVFISW
Trigger: CCAGGAGATGAAGACTGTTCAGAGACTGCCCAGCCC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGGAATCGGAGACTGCTaGGCAGCATCTGGCGATGCC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAGIGDC*AASGDA
Trigger: GGCATCGCCAGATGCTGCGCAGCAGTCTCCGATTCC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000415040.6
CDS-3UTR GCA 90 bp ACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TLASKVSAATRKKNSRTFNVHPA*GLAGRP
Trigger: AGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...GAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000422279.6
ENST00000636772.1
CDS-3UTR GCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGGGTGGAAGTCTTTGTaGCCGTGCAAAGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAGWKSL*PCKAAS
Trigger: GGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp GCCCTCATGGGCAACATGTGGGCTTCTTCTTGCTGGCAGTTAGGTAGAGGTTGCGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: ALMGNMWASSCWQLGRGCAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACATGTTGCCCATGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR GCA 90 bp ACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTGGCCTCAAAGGTCAGTaGTGCCACACGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TLEGSFSFRASASHCLVCGLKGQ*CHTEEE
Trigger: TTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCC...ACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp ATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCATGAGGGTGGCACAGTaGCCTAGGGCTGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: IGLKGQCCHTEEEFSDILMRVAQ*PRAGQS
Trigger: AGACTGCCCAGCCCTAGGGCACTGTGCCACCCTCAT...GAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR GCA 90 bp GCAGGGGTAAGGAAGAGAAGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGCCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: AGVRKRSTLEGSFSFRASPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...CGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTACCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR GCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp ATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCCAGTCTTTGGCACGGTaGCTGGGGGCAGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: IGLKGQCCHTEEEFSDILQSLAR*LGAGSD
Trigger: GTCACTTCCTGCCCCCAGGCACCGTGCCAAAGACTG...GAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPNVHPA*GLAGRP
Trigger: GGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGCAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGAGTCCACTCCAATGGTaGCCTTGTAATTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGSPLQW*PCNSYQ
Trigger: TTGATAAGAATTACAAGGCCACCATTGGAGTGGACT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp AGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACAATCTCCTGGGCCACCTaGAGGGCGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: STLASKVSAATRKKNSRTISWAT*RASFSI
Trigger: GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT...TGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000422279.6
ENST00000636772.1
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCATCTCCTGGGCCACCTaGAGGGCGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSISWAT*RASFSI
Trigger: GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGTCAGCCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALESAFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGATCAGCCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGSAFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp ACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCCTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 4 (lower is better)
Translates to: TLASKVSAATRKKNSRTFLWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...GAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALELWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCACAGTCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSTVFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGACTGT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGTCCATCAGCGCATACTaGGCAGGGGTACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRSISAY*AGVLRS
Trigger: GGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGA...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGTCCATCAGCGCATACTaGGCAGGGGTACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRSISAY*AGVLRS
Trigger: GGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGA...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR TCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCTCCATCAGCGCATACTaGGCAGGGGTACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSSISAY*AGVLRS
Trigger: GGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGA...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCTCACCAGTGAGAGATaGGACTGCCCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRLTSER*DCPVLS
Trigger: GCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACAAGCTCTGGAGGAATaGGGGTGGCACAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGQALEE*GWHSAL
Trigger: TAGGGCACTGTGCCACCCTCATTCCTCCAGAGCTTG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCAAGCTCTGGAGGAATaGGGGTGGCACAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEQALEE*GWHSAL
Trigger: TAGGGCACTGTGCCACCCTCATTCCTCCAGAGCTTG...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACAAGCTCTGGAGGAATaGGGGTGGCACAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQQALEE*GWHSAL
Trigger: TAGGGCACTGTGCCACCCTCATTCCTCCAGAGCTTG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGAAGGGCCCAGCAGGCTaGGCAAAAGAACAGAGACAC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRKGPAG*AKEQRH
Trigger: GTGTCTCTGTTCTTTTGCTCAGCCTGCTGGGCCCTT...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGTGACTCATAGAGTCTaGCCCCTCTCGCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGVTHRV*PLSPFC
Trigger: GCAGAAGGGCGAGAGGGGGCAGACTCTATGAGTCAC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGGAATCGGAGACTGCTaGGCAGCATCTGGCGATGCC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPGIGDC*AASGDA
Trigger: GGCATCGCCAGATGCTGCGCAGCAGTCTCCGATTCC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301043.10
ENST00000415040.6
ENST00000453384.7
CDS-3UTR GCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTTGGGGAATCGGAGACTaGTGCGCAGCATCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSWGIGD*CAASGD
Trigger: ATCGCCAGATGCTGCGCAGCAGTCTCCGATTCCCCA...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000415040.6
CDS-3UTR GCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAATGGGGAATCGGAGACTaGTGCGCAGCATCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQWGIGD*CAASGD
Trigger: ATCGCCAGATGCTGCGCAGCAGTCTCCGATTCCCCA...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000415040.6
CDS-3UTR GCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMNVHPA*GLAGRP
Trigger: AGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR GCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp ATACTGAGCAGGGGTACTCAGATCCTTCTTGGAACCTACAAGGAAGAGAAGCACCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ILSRGTQILLGTYKEEKHPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...GTGCTTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTACCCCTGCTCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR GCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGAAGTCTTTGTGCCCGTaGAAAGCGGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRKSLCP*KAASFL
Trigger: GAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTT...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAAGTCTTTGTGCCCGTaGAAAGCGGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSKSLCP*KAASFL
Trigger: GAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp GCCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: AQYSAFISWATWRASFSIGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR GCA 90 bp AGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACAGGACAACATCCCCAATaGGTCGAGCCCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: STLASKVSAATRKKNSRTGQHPQ*VEPPIS
Trigger: AGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCC...TGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000422279.6
ENST00000636772.1
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGGACAACATCCCCAATaGGTCGAGCCCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRGQHPQ*VEPPIS
Trigger: AGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGGGACAACATCCCCAATaGGTCGAGCCCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRGQHPQ*VEPPIS
Trigger: AGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCC...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCGGCCAGCCACTGCTTaGTATGTTCCAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRRPATA*YVPEMP
Trigger: TGGCATCTCTGGAACATACCAAGCAGTGGCTGGCCG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAATCTCCTGGGCCACCTaGAGGGCGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGISWAT*RASFSI
Trigger: GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAATCTCCTGGGCCACCTaGAGGGCGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQISWAT*RASFSI
Trigger: GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTATCTCCTGGGCCACCTaGAGGGCGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAISWAT*RASFSI
Trigger: GATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGTCAGCCTTCATCTCCTaGGCCACCTGGAGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMSAFIS*ATWRAS
Trigger: AGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGA...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGGCTCAGCCAGCACATTaGCCTCAAAGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRAQPAH*PQRSVL
Trigger: CAGCACTGACCTTTGAGGCCAATGTGCTGGCTGAGC...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACAGCTCAGCCAGCACATTaGCCTCAAAGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: STLASKVSAATRKKNSRTAQPAH*PQRSVL
Trigger: CAGCACTGACCTTTGAGGCCAATGTGCTGGCTGAGC...TGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000422279.6
ENST00000636772.1
CDS-3UTR CCA 90 bp ACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTGGGCTTCTTCTTGCTaGCAGTTAGGTAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TLEGSFSFRASASHCLVCWASSC*QLGRGC
Trigger: GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCA...ACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CCA 90 bp TTGCTGTCATCACTGTTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATTGGGCTTCTTCTTGCTaGCAGTTAGGTAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LLSSLLMRTTSPMRRAPDWASSC*QLGRGC
Trigger: GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCA...ATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAACAGTGATGACAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACCAGGGGTCAAGCTCTaGAGGAATGAGGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGPGVKL*RNEGGT
Trigger: TGTGCCACCCTCATTCCTCCAGAGCTTGACCCCTGG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRPATPL*EYCHQE
Trigger: CTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGCTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMLWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCTTTGGCACGGTGCCTaGGGGCAGGAAGTGACTAGC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPLWHGA*GQEVTS
Trigger: GCTAGTCACTTCCTGCCCCCAGGCACCGTGCCAAAG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
3UTR CAA 72 bp CCCTCTGTGGGAATACTGCCACCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PSVGILPPRGSS*VWIKSVQMSRG
Trigger: ACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTTCCATCAGCGCATACTaGGCAGGGGTACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQASISAY*AGVLRS
Trigger: GGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGA...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR TCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTTCCATCAGCGCATACTaGGCAGGGGTACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSSISAY*AGVLRS
Trigger: GGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGA...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR TCA 90 bp CTTTCTCCATCAGCGCATACTGAGCAGGGGTACTCAGATCCTTCTTGGAACCTATCCATCAGCGCATACTaGGCAGGGGTACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LSPSAHTEQGYSDPSWNLSISAY*AGVLRS
Trigger: GGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGA...TAGGTTCCAAGAAGGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR TCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTCACCAGTGAGAGATaGGACTGCCCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQALTSER*DCPVLS
Trigger: GCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAG...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGCAAGCTCTGGAGGAATaGGGGTGGCACAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMQALEE*GWHSAL
Trigger: TAGGGCACTGTGCCACCCTCATTCCTCCAGAGCTTG...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTAAGGGCCCAGCAGGCTaGGCAAAAGAACAGAGACAC +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSKGPAG*AKEQRH
Trigger: GTGTCTCTGTTCTTTTGCTCAGCCTGCTGGGCCCTT...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTAAGGGCCCAGCAGGCTaGGCAAAAGAACAGAGACAC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAKGPAG*AKEQRH
Trigger: GTGTCTCTGTTCTTTTGCTCAGCCTGCTGGGCCCTT...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGAGAAGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTATGCATAAGGCACAGTaGGAGGCTGGAATCATTAAG +
Preference number: 4 (lower is better)
Translates to: REAHWKGHSPSGHRPATAMHKAQ*EAGIIK
Trigger: CTTAATGATTCCAGCCTCTCACTGTGCCTTATGCAT...AGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR TCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGACGTCATCTCGGGGCTaGGGCTGCCCTACCATTACA +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMTSSRG*GCPTIT
Trigger: TGTAATGGTAGGGCAGCCTCAGCCCCGAGATGACGT...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000395245.9
CDS-3UTR TCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGTCCATCAGCGCATACTaGGCAGGGGTAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRSISAY*AGVRKR
Trigger: TCTCTTCCTTACCCCTGCTCAGTATGCGCTGATGGA...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000450529.5
CDS-3UTR TCA 90 bp AGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATCCATCAGCGCATACTaGGCAGGGGTAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: STLASKVSAATRKKNSRTSISAY*AGVRKR
Trigger: TCTCTTCCTTACCCCTGCTCAGTATGCGCTGATGGA...TGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMIPPHG*QNVHPA
Trigger: GGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTAAGTCTTTGTGCCCGTaGAAAGCGGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAKSLCP*KAASFL
Trigger: GAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTT...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAAAGTCTTTGTGCCCGTaGAAAGCGGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQKSLCP*KAASFL
Trigger: GAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTT...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCATTTGAACCTCTCCTaGCCAGCGGTATCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRHLNLS*PAVSQS
Trigger: GCTTTGGGATACCGCTGGGCAGGAGAGGTTCAAATG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp GGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTGAGCAGGGGTAAGGAAGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GHLEGVFLHQRILSRGKEGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...TTCCTTACCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGACAACATCCCCAATaGGTCGAGCCCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGGQHPQ*VEPPIS
Trigger: AGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp ACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTCATGTGGGCTTCTTCTTaGTGGCAGTTAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: TGRVILLQGIGQPLLGMFMWASS*WQLGRG
Trigger: ACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACAT...GAACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACCTCAACTCCAGGCCTaGGAGGTGACTCATAGAGTC +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQPQLQA*EVTHRV
Trigger: GACTCTATGAGTCACCTCCCAGGCCTGGAGTTGAGG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACGGCCAGCCACTGCTTaGTATGTTCCAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGRPATA*YVPEMP
Trigger: TGGCATCTCTGGAACATACCAAGCAGTGGCTGGCCG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCTCAGCCAGCACATTaGCCTCAAAGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGAQPAH*PQRSVL
Trigger: CAGCACTGACCTTTGAGGCCAATGTGCTGGCTGAGC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGCTCAGCCAGCACATTaGCCTCAAAGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSAQPAH*PQRSVL
Trigger: CAGCACTGACCTTTGAGGCCAATGTGCTGGCTGAGC...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGCTCAGCCAGCACATTaGCCTCAAAGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAAQPAH*PQRSVL
Trigger: CAGCACTGACCTTTGAGGCCAATGTGCTGGCTGAGC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCTCATGGGCAACATGTaGGCTTCTTCTTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRLMGNM*ASSCWQ
Trigger: CTGCCAGCAAGAAGAAGCCCACATGTTGCCCATGAG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGPATPL*EYCHQE
Trigger: CTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQPATPL*EYCHQE
Trigger: CTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp ATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCCCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: IGLKGQCCHTEEEFSDILPATPL*EYCHQE
Trigger: CTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGG...GAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTCCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSPATPL*EYCHQE
Trigger: CTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGG...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATATCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: LSLHLLGHLEGVFLHQRISSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...TATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR TCA 90 bp TACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: YSAFISWATWRASFSISASSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...TGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR TCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCTCACCAGTGAGAGATaGGACTGCCCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPLTSER*DCPVLS
Trigger: GCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGCTCACCAGTGAGAGATaGGACTGCCCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMLTSER*DCPVLS
Trigger: GCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAG...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGGACATTCTCACCAGTaGGAGATGAGACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQGHSHQ*EMRLPS
Trigger: ACTGGGCAGTCTCATCTCTCACTGGTGAGAATGTCC...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGGACATTCTCACCAGTaGGAGATGAGACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEGHSHQ*EMRLPS
Trigger: ACTGGGCAGTCTCATCTCTCACTGGTGAGAATGTCC...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
CDS-3UTR TCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAAGGGCCCAGCAGGCTaGGCAAAAGAACAGAGACAC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPKGPAG*AKEQRH
Trigger: GTGTCTCTGTTCTTTTGCTCAGCCTGCTGGGCCCTT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp GCCCTCATGGGCAACATGTGGGCTTCTTCTTGCTGGCAGTTAGGTAGAGGTTGCATGCATAAGGCACAGTaGGAGGCTGGAATCATTAAG +
Preference number: 4 (lower is better)
Translates to: ALMGNMWASSCWQLGRGCMHKAQ*EAGIIK
Trigger: CTTAATGATTCCAGCCTCTCACTGTGCCTTATGCAT...GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACATGTTGCCCATGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR TCA 90 bp GTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCACCAGTGAGAGATTCCATCAGCGCATACTaGGCAGGGGTAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VSAATRKKNSRTFSPVRDSISAY*AGVRKR
Trigger: TCTCTTCCTTACCCCTGCTCAGTATGCGCTGATGGA...ATCTCTCACTGGTGAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGGGTTAGAATGAGGTaGCCACCGAGGAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPRVRMR*PPRRET
Trigger: CGTCTCTCTCCTCGGTGGGCACCTCATTCTAACCCT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAAGTCTTTGTGCCCGTaGAAAGCGGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPKSLCP*KAASFL
Trigger: GAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp GTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCACCAGTGAGAGATGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: VSAATRKKNSRTFSPVRDAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...ATCTCTCACTGGTGAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR GCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACATTTGAACCTCTCCTaGCCAGCGGTATCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQHLNLS*PAVSQS
Trigger: GCTTTGGGATACCGCTGGGCAGGAGAGGTTCAAATG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTCATTTGAACCTCTCCTaGCCAGCGGTATCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSHLNLS*PAVSQS
Trigger: GCTTTGGGATACCGCTGGGCAGGAGAGGTTCAAATG...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCATTTGAACCTCTCCTaGCCAGCGGTATCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAHLNLS*PAVSQS
Trigger: GCTTTGGGATACCGCTGGGCAGGAGAGGTTCAAATG...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGGCCTCAAAGGTCAGTaGTGCCACACGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAGLKGQ*CHTEEE
Trigger: TTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGCCTCAAAGGTCAGTaGTGCCACACGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGGLKGQ*CHTEEE
Trigger: TTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGGACAACATCCCCAATaGGTCGAGCCCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPGQHPQ*VEPPIS
Trigger: AGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp ACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATAGTCCACTCCAATGGTaGCCTTGTAATTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: TQPSSPGPPGGRLSPSAHSPLQW*PCNSYQ
Trigger: TTGATAAGAATTACAAGGCCACCATTGGAGTGGACT...ATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCGGCCAGCCACTGCTTaGTATGTTCCAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPRPATA*YVPEMP
Trigger: TGGCATCTCTGGAACATACCAAGCAGTGGCTGGCCG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CATACTGAGCAGGGGTACTCAGATCCTTCTTGGAACCTACAAGGAAGAGAAGCACGGCCAGCCACTGCTTaGTATGTTCCAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: HTEQGYSDPSWNLQGREARPATA*YVPEMP
Trigger: TGGCATCTCTGGAACATACCAAGCAGTGGCTGGCCG...TGCTTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTACCCCTGCTCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR CCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGGCTCAGCCAGCACATTaGCCTCAAAGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMAQPAH*PQRSVL
Trigger: CAGCACTGACCTTTGAGGCCAATGTGCTGGCTGAGC...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp ACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCCTCATGGGCAACATGTaGGCTTCTTCTTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TLASKVSAATRKKNSRTFLMGNM*ASSCWQ
Trigger: CTGCCAGCAAGAAGAAGCCCACATGTTGCCCATGAG...GAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACTCATGGGCAACATGTaGGCTTCTTCTTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQLMGNM*ASSCWQ
Trigger: CTGCCAGCAAGAAGAAGCCCACATGTTGCCCATGAG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGAGGAGAGAGACGTCTaGAGTCTGGCGTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPEERDV*SLASFP
Trigger: AGGAAAAGACGCCAGACTTCAGACGTCTCTCTCCTC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR TCA 90 bp TCCAATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SNGGLVILIKGVFAEPINPGRRR*RGGGSL
Trigger: AAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGG...ATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR TCA 90 bp AGAGAAGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: REAHWKGHSPSGHRPATASSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...AGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR TCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGGACATTCTCACCAGTaGGAGATGAGACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPGHSHQ*EMRLPS
Trigger: ACTGGGCAGTCTCATCTCTCACTGGTGAGAATGTCC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
CDS-3UTR TCA 90 bp ACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCATTCTCACTCACCAGTaGGAGATGAGACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TLASKVSAATRKKNSRTFILTHQ*EMRLPS
Trigger: ACTGGGCAGTCTCATCTCTCACTGGTGAGTGAGAAT...GAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS-3UTR GCA 90 bp CACATCATTCAGGTTGAAGACAATGATGATGGCTTGAGCTCCTCTATAGTAGGTAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: HIIQVEDNDDGLSSSIVGNVHPA*GLAGRP
Trigger: AGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTCTTCAACCTGAATGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR GCA 90 bp TCCAATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SNGGLVILIKGVFAEPINTVPVR*SWQAQV
Trigger: CACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...ATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGCGGTATCCCAAAGCTaGAAACTGAAGGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPAVSQS*KLKGMP
Trigger: GGGCATTCCCTTCAGTTTGCAGCTTTGGGATACCGC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCATTTGAACCTCTCCTaGCCAGCGGTATCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPHLNLS*PAVSQS
Trigger: GCTTTGGGATACCGCTGGGCAGGAGAGGTTCAAATG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp ATCACTGTTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATTTCTCCAGGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: ITVDADNIPNASSPRFLQGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...CTGGAGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAACAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR GCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGGGCCTCAAAGGTCAGTaGTGCCACACGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMGLKGQ*CHTEEE
Trigger: TTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCC...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCATGTGGGCTTCTTCTTaGTGGCAGTTAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSMWASS*WQLGRG
Trigger: ACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACAT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGCCTCTGTGGGAATACTaGCACCAAGAGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMPLWEY*HQEAAL
Trigger: AAGAGCTGCCTCTTGGTGGCAGTATTCCCACAGAGG...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAATATCAAAGGTGTCTTTaGAGAACCCCACGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQYQRCL*RTPRCL
Trigger: CAGGCACCGTGGGGTTCTGCAAAGACACCTTTGATA...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415040.6
CDS-3UTR CCA 90 bp CTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTCTTCCTGTCCGGTGCTCCTaGCAGGCGCAGGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: LVILIKGVFAEPINEASLPVRCS*QAQVTR
Trigger: CCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGG...AAGACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR CCA 90 bp AGAAGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGTACTCAGATCCTTCTTaGAACCTACAAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RSTLEGSFSFRASASHCLYSDPS*NLQGRE
Trigger: TTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTA...CAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS-3UTR CCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTTGGGCTTCTTCTTGCTaGCAGTTAGGTAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAWASSC*QLGRGC
Trigger: GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCA...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTTGGGCTTCTTCTTGCTaGCAGTTAGGTAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSWASSC*QLGRGC
Trigger: GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCA...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp CTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTCTTCGCGGGCCACGGAGATaGAACAATCACCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LVILIKGVFAEPINEASLRGPRR*NNHPGP
Trigger: CGGCCCCGGGTGATTGTTTCATCTCCGTGGCCCGCG...AAGACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR GCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAATGTGGGCTTCTTCTTaGTGGCAGTTAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGMWASS*WQLGRG
Trigger: ACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACAT...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTATGTGGGCTTCTTCTTaGTGGCAGTTAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAMWASS*WQLGRG
Trigger: ACCTCTACCTAACTGCCAGCAAGAAGAAGCCCACAT...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGGAGACGTCTGAAGTCTaGCGTCTTTTCCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMETSEV*RLFLQG
Trigger: GCCTTGAAGGAAAAGACGCCAGACTTCAGACGTCTC...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301043.10
CDS-3UTR CCA 90 bp GTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTCCAGAGATGCAGTCCACTCCAATGGTaGCCTTGTAATTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: VILLQGIGQPLLGMFQRCSPLQW*PCNSYQ
Trigger: TTGATAAGAATTACAAGGCCACCATTGGAGTGGACT...GCATCTCTGGAACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGTGGGCTTCTTCTTGCTaGCAGTTAGGTAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMWASSC*QLGRGC
Trigger: GCAACCTCTACCTAACTGCCAGCAAGAAGAAGCCCA...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRGSSLV*IKSVQM
Trigger: CATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSGSSLV*IKSVQM
Trigger: CATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR TCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAATGCATAAGGCACAGTaGGAGGCTGGAATCATTAAG +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQMHKAQ*EAGIIK
Trigger: CTTAATGATTCCAGCCTCTCACTGTGCCTTATGCAT...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTATGCATAAGGCACAGTaGGAGGCTGGAATCATTAAG +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSMHKAQ*EAGIIK
Trigger: CTTAATGATTCCAGCCTCTCACTGTGCCTTATGCAT...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGTGGGCGTCCCGAAGATaGCTCTGGGGCGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: NGGLVILIKGVFAEPINEWASRR*LWGEET
Trigger: AGTCTCCTCGCCCCAGAGTCATCTTCGGGACGCCCA...CTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR GCA 90 bp GGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLVILIKGVFAEPINEASPECSS*LRPCRA
Trigger: CGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGG...ACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR GCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCACTCACCAGTGGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RSVLPHGRRILGHSHSPVGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...CACTGGTGAGTGAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS-3UTR GCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTCTTTCCTTCCTCAGGCACTaGGGCAGCTCCGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: LVILIKGVFAEPINEASLSFLRH*GSSART
Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAGGAAGGA...AAGACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR CCA 90 bp AATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGCAGGTGACGCGGGGGTaGAAGTCTTTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: NGGLVILIKGVFAEPINEQVTRG*KSLCPC
Trigger: GCACGGGCACAAAGACTTCCACCCCCGCGTCACCTG...CTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR CCA 90 bp AACCTATTAATGAGGCAAGTCTTCCCCACCGACAGGTCCCCCACCACAATGACCAGTCCACTCCAATGGTaGCCTTGTAATTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: NLLMRQVFPTDRSPTTMTSPLQW*PCNSYQ
Trigger: TTGATAAGAATTACAAGGCCACCATTGGAGTGGACT...GGTCATTGTGGTGGGGGACCTGTCGGTGGGGAAGACTTGCCTCATTAATAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR CCA 90 bp GCTGCCACACGGAAGAAGAATTCTCGGACATTCTCACCAGTGAGAGATGAGACTGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: AATRKKNSRTFSPVRDETGSSLV*IKSVQM
Trigger: CATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC...AGTCTCATCTCTCACTGGTGAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSGSSLV*IKSVQM
Trigger: CATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGGCAGCTCTTTGGTCTaGATAAAGTCAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQGSSLV*IKSVQM
Trigger: CATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp CTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTCTTTCTTCGGCCGCCAATTaGGGGCGGGGAGTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: LVILIKGVFAEPINEASLSSAAN*GRGVPS
Trigger: AGACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGA...AAGACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCATCCTTCTTGGAACTTaGTATGTTCCAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSILLGT*YVPEMP
Trigger: TGGCATCTCTGGAACATACCAAGTTCCAAGAAGGAT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS-3UTR TCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGTCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRSSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGATGCATAAGGCACAGTaGGAGGCTGGAATCATTAAG +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMMHKAQ*EAGIIK
Trigger: CTTAATGATTCCAGCCTCTCACTGTGCCTTATGCAT...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCATGCATAAGGCACAGTaGGAGGCTGGAATCATTAAG +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPMHKAQ*EAGIIK
Trigger: CTTAATGATTCCAGCCTCTCACTGTGCCTTATGCAT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR GCA 90 bp AATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: NGGLVILIKGVFAEPINENVHPA*GLAGRP
Trigger: AGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATT...CTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR GCA 90 bp TCCAATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGGGTGGAAGTCTTTGTaGCCGTGCAAAGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SNGGLVILIKGVFAEPINGWKSL*PCKAAS
Trigger: GGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCC...ATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR GCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAGMFQR*HIIQVE
Trigger: TTCAACCTGAATGATGTGGCATCTCTGGAACATACC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGTCCACTCCAATGGTaGCCTTGTAATTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSSPLQW*PCNSYQ
Trigger: TTGATAAGAATTACAAGGCCACCATTGGAGTGGACT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGAGTCCACTCCAATGGTaGCCTTGTAATTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRSPLQW*PCNSYQ
Trigger: TTGATAAGAATTACAAGGCCACCATTGGAGTGGACT...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGTACTCAGATCCTTCTTaGAACCTACAAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRYSDPS*NLQGRE
Trigger: TTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTA...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
CDS-3UTR CCA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGTACTCAGATCCTTCTTaGAACCTACAAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: HSERLESLSILKHKGPSRYSDPS*NLQGRE
Trigger: TTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTA...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCTACTCAGATCCTTCTTaGAACTTGGTATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RHSERLESLSILKHKGPSYSDPS*NLVCSR
Trigger: TCTGGAACATACCAAGTTCCAAGAAGGATCTGAGTA...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS-3UTR TCA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTTCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQASSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTTCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSSSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR GCA 90 bp GGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTAAGTCTTTGTGCCCGTaGAAAGCGGCCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GLVILIKGVFAEPINEASKSLCP*KAASFL
Trigger: GAGGAAGGAGGCCGCTTTGCACGGGCACAAAGACTT...ACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR CCA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAAGTCCACTCCAATGGTaGCCTTGTAATTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQSPLQW*PCNSYQ
Trigger: TTGATAAGAATTACAAGGCCACCATTGGAGTGGACT...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CCA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGTACTCAGATCCTTCTTaGAACCTACAAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEYSDPS*NLQGRE
Trigger: TTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTA...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
CDS-3UTR CCA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGATACTCAGATCCTTCTTaGAACCTACAAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGYSDPS*NLQGRE
Trigger: TTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTA...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301043.10
ENST00000395245.9
ENST00000415040.6
CDS-3UTR CCA 90 bp GGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTCCAGCTACCCCTCTGTaGGAATACTGCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: GLVILIKGVFAEPINEASPATPL*EYCHQE
Trigger: CTCTTGGTGGCAGTATTCCCACAGAGGGGTAGCTGG...ACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR TCA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGTCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMSSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR TCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCTCCTCTATAGTAGGTTaGTGCAATGCATTTGAACCT +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPSSIVG*CNAFEP
Trigger: AGGTTCAAATGCATTGCATCAACCTACTATAGAGGA...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CCA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGTCCACTCCAATGGTaGCCTTGTAATTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: IRHSERLESLSILKHKGPSPLQW*PCNSYQ
Trigger: TTGATAAGAATTACAAGGCCACCATTGGAGTGGACT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS CCA 90 bp CTGAGAAGGCGCCGAGGCCGGATCCGCGTCAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCGCGGCCGGGGTGTCCCGACTACAAC +
Preference number: 5 (lower is better)
Translates to: LRRRRGRIRVSDPGA*RPDDHPRPGCPDYN
Trigger: GTTGTAGTCGGGACACCCCGGCCGCGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCTGACGCGGATCCGGCCTCGGCGCCTTCTCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000301043.10
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000419712.7
ENST00000422279.6
ENST00000482688.5
ENST00000483554.1
ENST00000580843.6
ENST00000582934.1
ENST00000636154.2
ENST00000636513.1
ENST00000636534.2
ENST00000636772.1
CDS TCA 90 bp CGGGTGCCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCTaGGAAGGCGCCGAGGCCGGATCCGCGTCAGCGACCCGGGCGCGT +
Preference number: 5 (lower is better)
Translates to: RVPECSSCLRPCRAP*EGAEAGSASATRAR
Trigger: ACGCGCCCGGGTCGCTGACGCGGATCCGGCCTCGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000301043.10
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000419712.7
ENST00000422279.6
ENST00000482688.5
ENST00000483554.1
ENST00000580843.6
ENST00000582934.1
ENST00000636154.2
ENST00000636513.1
ENST00000636534.2
ENST00000636772.1
CDS GCA 90 bp CAGGCACTGGGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: QALGQLRQDAIPPHG*QNVHPACGLAGRPR
Trigger: CCTCGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCCCAGTGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412625.5
CDS GCA 90 bp CAGGCACTGGGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: QALGQLRQDAIPPHG*QNVHPACGLAGRPS
Trigger: GCTGGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCCCAGTGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000436730.7
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS TCA 90 bp AGTCCGCGGTCTCGGAGACGCTACGACCACCGCGGGCCACGGAGATaGAACAATCACCCGGGGCCGCGGCGAGCCCAAAATCACCCGGGC +
Preference number: 5 (lower is better)
Translates to: SPRSRRRYDHRGPRR*NNHPGPRRAQNHPG
Trigger: GCCCGGGTGATTTTGGGCTCGCCGCGGCCCCGGGTGATTGTTTCATCTCCGTGGCCCGCGGTGGTCGTAGCGTCTCCGAGACCGCGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000483554.1
ENST00000580843.6
ENST00000582934.1
ENST00000636154.2
ENST00000636513.1
ENST00000636772.1
CDS GCA 90 bp CAGAACCTGGGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: QNLGQLRQDAIPPHG*QNVHPACGLAGRPE
Trigger: CTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCCCAGGTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636513.1
CDS TCA 90 bp TGCAGAACCCCACGGTGCCTGTCCGGTGCTCCTGGCAGGCGCAGGTaGCGCGGGGGTGGAAGTCTTTGTGCCCGTGCAAAGCGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: CRTPRCLSGAPGRRR*RGGGSLCARAKRPP
Trigger: AGGAGGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGGTTCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415040.6
CDS-3UTR CAA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGATCCTGCCTGCGGCCTaGCAGGGCGCCCCAGCCGAA +
Preference number: 5 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGILPAA*QGAPAE
Trigger: TTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCAGGAT...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp GGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTGCCAGAATGTTCATCCTGCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: GSSARTRSLRTGARMFILRGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...CAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS TCA 90 bp CCAAGGAGAGGCGGCGCTTCCCTCCTCAACTCCAGGCCTGGGAGGTaGCTCATAGAGTCTGCCCCCTCTCGCCCTTCTGCCCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: PRRGGASLLNSRPGR*LIESAPSRPSALGG
Trigger: ACCTCCCAGGGCAGAAGGGCGAGAGGGGGCAGACTCTATGAGTCACCTCCCAGGCCTGGAGTTGAGGAGGGAAGCGCCGCCTCTCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000430132.6
CDS GCA 90 bp CGCTTCCCTCCTCAACTCCAGGCCTGGGAGGTGACTCATAGAGTCTaGCCCCTCTCGCCCTTCTGCCCTGGGAGGTCGGGGGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: RFPPQLQAWEVTHRV*PLSPFCPGRSGVRM
Trigger: CATCCTCACCCCCGACCTCCCAGGGCAGAAGGGCGAGAGGGGGCAGACTCTATGAGTCACCTCCCAGGCCTGGAGTTGAGGAGGGAAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000430132.6
CDS GCA 90 bp TTAAATCTGGGGCAGCTCCGCCAGGACGCGATCCCTCCGCACGGGTaGCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: LNLGQLRQDAIPPHG*QNVHPACGLAGRPE
Trigger: CTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCGTCCTGGCGGAGCTGCCCCAGATTTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636772.1
CDS-3UTR CAA 90 bp TTCATCCTGCCTGCGGCCTTGCAGGGCGCCCTGAGAAGGCGCCGAGGCCGGATCGAGACGCCAGCCGAATaGGTGATGGGGAATCGGAGA +
Preference number: 5 (lower is better)
Translates to: FILPAALQGALRRRRGRIETPAE*VMGNRR
Trigger: TCTCCGATTCCCCATCACCAATTCGGCTGGCGTCTC...GATCCGGCCTCGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS-3UTR CAA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGGCGCCCCAGCCGAATaGGTGATGGGGAATCGGAGA +
Preference number: 5 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGGAPAE*VMGNRR
Trigger: TCTCCGATTCCCCATCACCAATTCGGCTGGGGCGCC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS GCA 90 bp TCTTTGTTGTGGGTGTCCCTAACTCACCCCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTGACGCGGGGGTGGAAGTCTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SLLWVSLTHPTVPVR*SWQAQVTRGWKSLC
Trigger: GCACAAAGACTTCCACCCCCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGGTGAGTTAGGGACACCCACAACAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS-3UTR CAA 90 bp AGGGCTGGGCAGTCTCTGAACAGTCTCCTCAGCCCTCATGGGCAACATGTGGGCCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: RAGQSLNSLLSPHGQHVGRGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...GCCCACATGTTGCCCATGAGGGCTGAGGAGACTGTTCAGAGACTGCCCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CAA 90 bp GGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTCCAGCTCTTCGGCCGCCAATaGGGGGCGGGGAGTCCCGTC +
Preference number: 5 (lower is better)
Translates to: GRVILLQGIGQPLLGMFQLFGRQ*GAGSPV
Trigger: GACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGAG...CTGGAACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CAA 90 bp GAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTCCAGAATCCTGCCTGCGGCCTaGCAGGGCGCCCTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: EGSFSFRASASHCLVCSRILPAA*QGALRR
Trigger: CCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGAT...TCTGGAACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CAA 90 bp TTCTCACCAGTGAGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCGGGGGCATCCAGTCTTaGGCACGGTGCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: FSPVRDETAQYSAFISWAGGIQS*ARCLGA
Trigger: TGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCCC...GGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS TCA 90 bp AGGATGGTGGAGGGGAAGCGTGCGAAGGGGGTGCCAGGGTTAGAATaGGGTGCCCACCGAGGAGAGAGACGTCTGAAGTCTGGCGTCTTT +
Preference number: 5 (lower is better)
Translates to: RMVEGKRAKGVPGLE*GAHRGERRLKSGVF
Trigger: AAAGACGCCAGACTTCAGACGTCTCTCTCCTCGGTGGGCACCTCATTCTAACCCTGGCACCCCCTTCGCACGCTTCCCCTCCACCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000430132.6
CDS-3UTR CAA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCATCCTGCCTGCGGCCTaGCAGGGCGCCCCAGCCGAA +
Preference number: 5 (lower is better)
Translates to: RHSERLESLSILKHKGPSILPAA*QGAPAE
Trigger: TTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCAGGAT...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp TGCCAGAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCTGAGAAGGCGCCGCCCACCACAATGACCTaGGAGATCTTAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: CQNVHPACGLAGRPEKAPPTTMT*EILNLP
Trigger: GGGCAGATTTAAGATCTCCAAGGTCATTGTGGTGGG...CGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636534.2
CDS CCA 90 bp CCTCGCTATGACTACAGAGTTTCCTGGGACCTCCTCTCTTTGTTGTaGGTGTCCCTAACTCACCCCACGGTGCCTGTCCGGTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PRYDYRVSWDLLSLL*VSLTHPTVPVRCSW
Trigger: CCAGGAGCACCGGACAGGCACCGTGGGGTGAGTTAGGGACACCCACAACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTCATAGCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS-3UTR CAA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCCCACCACAATGACCTaGGAGATCTTAAATCCCACG +
Preference number: 5 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGPTTMT*EILNPT
Trigger: CGTGGGATTTAAGATCTCCAAGGTCATTGTGGTGGG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCATCGGCCAGCCACTGCTaGGTATGTTCCAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: PSTQPSSPGPPGGRLSPSSASHC*VCSRDA
Trigger: GGCATCTCTGGAACATACCAAGCAGTGGCTGGCCGA...TGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CAA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGGGGGCATCCAGTCTTaGGCACGGTGCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: HSERLESLSILKHKGPSRGGIQS*ARCLGA
Trigger: TGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCCC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGGGGGCATCCAGTCTTaGGCACGGTGCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: RHSERLESLSILKHKGPSGGIQS*ARCLGA
Trigger: TGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCCC...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp ATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCCTCTTCGGCCGCCAATaGGGGGCGGGGAGTCCCGTC +
Preference number: 5 (lower is better)
Translates to: IGLKGQCCHTEEEFSDILLFGRQ*GAGSPV
Trigger: GACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGAG...GAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CAA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACTCTTCGGCCGCCAATaGGGGGCGGGGAGTCCCGTC +
Preference number: 5 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQLFGRQ*GAGSPV
Trigger: GACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGAG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000395245.9
CDS-3UTR CAA 90 bp ATACTGAGCAGGGGTAAGGAAGAGAAGCACACTGGAAGGGTCATTCTCCTTCAGCTCTTCGGCCGCCAATaGGGGGCGGGGAGTCCCGTC +
Preference number: 5 (lower is better)
Translates to: ILSRGKEEKHTGRVILLQLFGRQ*GAGSPV
Trigger: GACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGAG...CTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTACCCCTGCTCAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CAA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGCCCACCACAATGACCTaGGAGATCTTAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGPTTMT*EILNLP
Trigger: GGGCAGATTTAAGATCTCCAAGGTCATTGTGGTGGG...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTATCCTGCCTGCGGCCTaGCAGGGCGCCCTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAILPAA*QGALRR
Trigger: CCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGAT...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
CDS-3UTR CAA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: HSERLESLSILKHKGPSRRGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: RHSERLESLSILKHKGPSRGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRRGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGGGGGCATCCAGTCTTaGGCACGGTGCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEGGIQS*ARCLGA
Trigger: TGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCCC...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTGGGGGCATCCAGTCTTaGGCACGGTGCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQAGGIQS*ARCLGA
Trigger: TGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCCC...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCATCCTGCCTGCGGCCTaGCAGGGCGCCCCAGCCGAA +
Preference number: 5 (lower is better)
Translates to: IRHSERLESLSILKHKGPILPAA*QGAPAE
Trigger: TTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCAGGAT...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSRGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGGGGGCATCCAGTCTTaGGCACGGTGCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: IRHSERLESLSILKHKGPGGIQS*ARCLGA
Trigger: TGCCCCCAGGCACCGTGCCAAAGACTGGATGCCCCC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGGCGCCCCAGCCGAATaGGTGATGGGGAATCGGAGA +
Preference number: 5 (lower is better)
Translates to: HSERLESLSILKHKGPSRGAPAE*VMGNRR
Trigger: TCTCCGATTCCCCATCACCAATTCGGCTGGGGCGCC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS TCA 90 bp AGGCAAGAGTGTCACAGCAGAGCCCTAAAGCCTCCAACTCACCAGTaGGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: RQECHSRALKPPTHQ*EMRLPSTQPSSPGP
Trigger: TGGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAGTTGGAGGCTTTAGGGCTCTGCTGTGACACTCTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474704.1
ENST00000496866.1
CDS GCA 90 bp CTGGGGAGAAGGGATAGCTGGAAGGGGTGTGGAAGCACTCACAGCTaGAAACTGAAGGGAATGCCCAGCACCTCAAATCGTTCCATCTCG +
Preference number: 5 (lower is better)
Translates to: LGRRDSWKGCGSTHS*KLKGMPSTSNRSIS
Trigger: CGAGATGGAACGATTTGAGGTGCTGGGCATTCCCTTCAGTTTGCAGCTGTGAGTGCTTCCACACCCCTTCCAGCTATCCCTTCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481501.1
CDS GCA 90 bp GGTGGAAAATATGTGAAGCAGGGATTGGAGGCTCACTGTGCCCTCTaGCACCCTCAACCAGGCAAGCACTCACGGACAACATCCCCAATG +
Preference number: 5 (lower is better)
Translates to: GGKYVKQGLEAHCAL*HPQPGKHSRTTSPM
Trigger: CATTGGGGATGTTGTCCGTGAGTGCTTGCCTGGTTGAGGGTGGCAGAGGGCACAGTGAGCCTCCAATCCCTGCTTCACATATTTTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474704.1
CDS CCA 90 bp CCCAAGGGGGTGGTTGTTTACCCTCGCTATGACTACAGAGTTTCCTaGGACCTCCTCTCTTTGTTGTGGGTGTCCCTAACTCACCCCACG +
Preference number: 5 (lower is better)
Translates to: PKGVVVYPRYDYRVS*DLLSLLWVSLTHPT
Trigger: CGTGGGGTGAGTTAGGGACACCCACAACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTCATAGCGAGGGTAAACAACCACCCCCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS-3UTR CAA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: IRHSERLESLSILKHKGPRGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp TTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATTTCTCCAGCTCAGCCCCCACCACAATGACCTaGGAGATCTTAAATCCCACG +
Preference number: 5 (lower is better)
Translates to: LMRTTSPMRRAPDFSSSAPTTMT*EILNPT
Trigger: CGTGGGATTTAAGATCTCCAAGGTCATTGTGGTGGG...GGCTGAGCTGGAGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CAA 90 bp TCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTGAGCAGGGGGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: SPGPPGGRLSPSAHTEQGATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...CCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CAA 90 bp TTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATTTCTCCAGCTCAGCCTTGCTGTCATCACTGTaGATGCGGACAACATCCCCA +
Preference number: 5 (lower is better)
Translates to: LMRTTSPMRRAPDFSSSALLSSL*MRTTSP
Trigger: TGGGGATGTTGTCCGCATCAACAGTGATGACAGCAA...GGCTGAGCTGGAGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS TCA 90 bp ATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTaGGCAGGGGTACTCAGATCCTTCTTGGAACTTGGTATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ISWATWRASFSISAY*AGVLRSFLELGMFQ
Trigger: CTGGAACATACCAAGTTCCAAGAAGGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS TCA 90 bp CCCTGCCCTGGGGCTCCATGGATGCTATGTGGGGATCTGAGCAGGTaGCCACCTTCCCATTTCAGACACCTTAGTCTCTACTCAGAAATC +
Preference number: 5 (lower is better)
Translates to: PCPGAPWMLCGDLSR*PPSHFRHLSLYSEI
Trigger: GATTTCTGAGTAGAGACTAAGGTGTCTGAAATGGGAAGGTGGTCACCTGCTCAGATCCCCACATAGCATCCATGGAGCCCCAGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483554.1
CDS CCA 90 bp ATTATAGACACCAGGCATCCCAGGCAGCTGCGTGGACAGGTGTGCTaGGGAGGAGGAGTGTTTTGTGCTCCAGAAGCAGAGAGACATGAA +
Preference number: 5 (lower is better)
Translates to: IIDTRHPRQLRGQVC*GGGVFCAPEAERHE
Trigger: TTCATGTCTCTCTGCTTCTGGAGCACAAAACACTCCTCCTCCCCAGCACACCTGTCCACGCAGCTGCCTGGGATGCCTGGTGTCTATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481501.1
CDS-3UTR CAA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGTCGGCCAGCCACTGCTaGGTATGTTCCAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: HSERLESLSILKHKGPSRSASHC*VCSRDA
Trigger: GGCATCTCTGGAACATACCAAGCAGTGGCTGGCCGA...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCTCGGCCAGCCACTGCTaGGTATGTTCCAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: RHSERLESLSILKHKGPSSASHC*VCSRDA
Trigger: GGCATCTCTGGAACATACCAAGCAGTGGCTGGCCGA...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp CCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGACATTCTCACCAGTCGGCCAGCCACTGCTaGGTATGTTCCAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: PQRSVLPHGRRILGHSHQSASHC*VCSRDA
Trigger: GGCATCTCTGGAACATACCAAGCAGTGGCTGGCCGA...CTGGTGAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CAA 90 bp AGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTACCCACCACAATGACCTaGGAGATCTTAAATCTGGGG +
Preference number: 5 (lower is better)
Translates to: STLEGSFSFRASASHCLVPTTMT*EILNLG
Trigger: CCCCAGATTTAAGATCTCCAAGGTCATTGTGGTGGG...TACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636772.1
CDS TCA 90 bp GAAGGGATAGCTGGAAGGGGTGTGGAAGCACTCACAGCTGCAAACTaGAGGGAATGCCCAGCACCTCAAATCGTTCCATCTCGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: EGIAGRGVEALTAAN*RECPAPQIVPSRSP
Trigger: TGGACTTCGAGATGGAACGATTTGAGGTGCTGGGCATTCCCTTCAGTTTGCAGCTGTGAGTGCTTCCACACCCCTTCCAGCTATCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481501.1
CDS GCA 90 bp AAAGAAGGGTGGAAAATATGTGAAGCAGGGATTGGAGGCTCACTGTaGCCTCTGCCACCCTCAACCAGGCAAGCACTCACGGACAACATC +
Preference number: 5 (lower is better)
Translates to: KEGWKICEAGIGGSL*PLPPSTRQALTDNI
Trigger: GATGTTGTCCGTGAGTGCTTGCCTGGTTGAGGGTGGCAGAGGGCACAGTGAGCCTCCAATCCCTGCTTCACATATTTTCCACCCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474704.1
CDS CCA 90 bp TCACACTCAGATCCTTCTTGGAACCTACAAGGAAGAGAAGCACACTaGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SHSDPSWNLQGREAH*KGHSPSGHRPATAW
Trigger: CCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCTTCTCTTCCTTGTAGGTTCCAAGAAGGATCTGAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474704.1
ENST00000496866.1
CDS-3UTR CAA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGAGACGCCAGCCGAATaGGTGATGGGGAATCGGAGA +
Preference number: 5 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGETPAE*VMGNRR
Trigger: TCTCCGATTCCCCATCACCAATTCGGCTGGCGTCTC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000415040.6
CDS-3UTR CAA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAGACGCCAGCCGAATaGGTGATGGGGAATCGGAGA +
Preference number: 5 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEETPAE*VMGNRR
Trigger: TCTCCGATTCCCCATCACCAATTCGGCTGGCGTCTC...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000415040.6
CDS-3UTR CAA 90 bp CTGGACAGTCCCCTGAGGAGTAGGGGGCATCCAGTCTTTGGCACGGTGCCTGGGTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: LDSPLRSRGHPVFGTVPGLSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...CCCAGGCACCGTGCCAAAGACTGGATGCCCCCTACTCCTCAGGGGACTGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp AGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCGGACAATGATGATGGCTaGAGCTCCTCTATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: STQPSSPGPPGGRLSPSADNDDG*SSSIVG
Trigger: ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTC...CGCTGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CAA 90 bp CCCAGTACTCAGCCTTCATCTCCTGGGCCACCTGGAGGGCGTCTTTCTCCATCAGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: PSTQPSSPGPPGGRLSPSATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...TGATGGAGAAAGACGCCCTCCAGGTGGCCCAGGAGATGAAGGCTGAGTACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CAA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGTCGGCCAGCCACTGCTaGGTATGTTCCAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: SSLVWIKSVQMSRGQALESASHC*VCSRDA
Trigger: GGCATCTCTGGAACATACCAAGCAGTGGCTGGCCGA...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
CDS-3UTR CAA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTTCGGCCAGCCACTGCTaGGTATGTTCCAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSSASHC*VCSRDA
Trigger: GGCATCTCTGGAACATACCAAGCAGTGGCTGGCCGA...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
CDS-3UTR CAA 90 bp ATCACTGTTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATTTCTCCAGCCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: ITVDADNIPNASSPRFLQPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...CTGGAGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAACAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CAA 90 bp AGCACACTGGAAGGGTCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTAGACAATGATGATGGCTaGAGCTCCTCTATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: STLEGSFSFRASASHCLVDNDDG*SSSIVG
Trigger: ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTC...TACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGACCCTTCCAGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CAA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCTCGGCCAGCCACTGCTaGGTATGTTCCAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: IRHSERLESLSILKHKGPSASHC*VCSRDA
Trigger: GGCATCTCTGGAACATACCAAGCAGTGGCTGGCCGA...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp ATCACTGTTGATGCGGACAACATCCCCAATGCGTCGAGCCCCCGATTTCTCCAGGACAATGATGATGGCTaGAGCTCCTCTATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: ITVDADNIPNASSPRFLQDNDDG*SSSIVG
Trigger: ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTC...CTGGAGAAATCGGGGGCTCGACGCATTGGGGATGTTGTCCGCATCAACAGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000422279.6
CDS-3UTR CAA 90 bp TCATTCTCCTTCAGGGCATCGGCCAGCCACTGCTTGGTATGTTCCAGAGATGCCGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: SFSFRASASHCLVCSRDAATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...GGCATCTCTGGAACATACCAAGCAGTGGCTGGCCGATGCCCTGAAGGAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395243.7
ENST00000636513.1
ENST00000636772.1
CDS-3UTR CAA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCTTGCTGTCATCACTGTaGATGCGGACAACATCCCCA +
Preference number: 5 (lower is better)
Translates to: RHSERLESLSILKHKGPSLLSSL*MRTTSP
Trigger: TGGGGATGTTGTCCGCATCAACAGTGATGACAGCAA...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGCCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCCCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: RHSERLESLSILKHKGPSPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp TCCAATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATCTCTTCGGCCGCCAATaGGGGGCGGGGAGTCCCGTC +
Preference number: 5 (lower is better)
Translates to: SNGGLVILIKGVFAEPINLFGRQ*GAGSPV
Trigger: GACGGGACTCCCCGCCCCCAATTGGCGGCCGAAGAG...ATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR CAA 90 bp GCCAGCACATTGGCCTCAAAGGTCAGTGCTGCCACACGGAAGAAGAATTCTCGGGTACTCAGATCCTTCTaGGAACTTGGTATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ASTLASKVSAATRKKNSRVLRSF*ELGMFQ
Trigger: CTGGAACATACCAAGTTCCAAGAAGGATCTGAGTAC...CCGAGAATTCTTCTTCCGTGTGGCAGCACTGACCTTTGAGGCCAATGTGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS-3UTR CAA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGCCCACCACAATGACCTaGGAGATCTTAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: HSERLESLSILKHKGPSRPTTMT*EILNLP
Trigger: GGGCAGATTTAAGATCTCCAAGGTCATTGTGGTGGG...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACCCACCACAATGACCTaGGAGATCTTAAATCCCACG +
Preference number: 5 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGPTTMT*EILNPT
Trigger: CGTGGGATTTAAGATCTCCAAGGTCATTGTGGTGGG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAACCCACCACAATGACCTaGGAGATCTTAAATCCCACG +
Preference number: 5 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQPTTMT*EILNPT
Trigger: CGTGGGATTTAAGATCTCCAAGGTCATTGTGGTGGG...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCCCACCACAATGACCTaGGAGATCTTAAATCCCACG +
Preference number: 5 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEPTTMT*EILNPT
Trigger: CGTGGGATTTAAGATCTCCAAGGTCATTGTGGTGGG...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAATTGCTGTCATCACTGTaGATGCGGACAACATCCCCA +
Preference number: 5 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQLLSSL*MRTTSP
Trigger: TGGGGATGTTGTCCGCATCAACAGTGATGACAGCAA...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGATTGCTGTCATCACTGTaGATGCGGACAACATCCCCA +
Preference number: 5 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGLLSSL*MRTTSP
Trigger: TGGGGATGTTGTCCGCATCAACAGTGATGACAGCAA...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTTTGCTGTCATCACTGTaGATGCGGACAACATCCCCA +
Preference number: 5 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQALLSSL*MRTTSP
Trigger: TGGGGATGTTGTCCGCATCAACAGTGATGACAGCAA...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGACCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp AGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTTTATCAAAGGTGTCTTaGCAGAACCCCACGGTGCCT +
Preference number: 5 (lower is better)
Translates to: RQLFGLDKVSANVQGSSSLSKVS*QNPTVP
Trigger: AGGCACCGTGGGGTTCTGCAAAGACACCTTTGATAA...AGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415040.6
CDS GCA 90 bp CACCTTCCCATTTCAGACACCTTAGTCTCTACTCAGAAATCCAGCTaGCACCCTTCTACCCAACCCCATCTCATAGAACTCACAACAACC +
Preference number: 5 (lower is better)
Translates to: HLPISDTLVSTQKSS*HPSTQPHLIELTTT
Trigger: GGTTGTTGTGAGTTCTATGAGATGGGGTTGGGTAGAAGGGTGGCAGCTGGATTTCTGAGTAGAGACTAAGGTGTCTGAAATGGGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483554.1
CDS-3UTR CAA 90 bp AATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGCGGGGGTGGAAGTCTTaGTGCCCGTGCAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: NGGLVILIKGVFAEPINERGWKS*CPCKAA
Trigger: GGCCGCTTTGCACGGGCACAAAGACTTCCACCCCCG...CTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS-3UTR CAA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCGACAATGATGATGGCTaGAGCTCCTCTATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: RHSERLESLSILKHKGPSDNDDG*SSSIVG
Trigger: ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTC...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: HSERLESLSILKHKGPSRATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCCCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: IRHSERLESLSILKHKGPPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGATCCTTCTTGGAACTaGGTATGTTCCAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQDPSWN*VCSRDA
Trigger: GGCATCTCTGGAACATACCAAGTTCCAAGAAGGATC...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS GCA 90 bp GCAGGGGTACTCAGATCCTTCTTGGAACTTGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAAGACAATGATGATGGCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: AGVLRSFLELGMFQR*HIIQVEDNDDGLSS
Trigger: GGAGCTCAAGCCATCATCATTGTCTTCAACCTGAATGATGTGGCATCTCTGGAACATACCAAGTTCCAAGAAGGATCTGAGTACCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS-3UTR CAA 90 bp TTCTCACCAGTGAGAGATGAGACTGCCCAGTACTCAGCCTTCATCTCCTGGGCCTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: FSPVRDETAQYSAFISWALSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...GGCCCAGGAGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CAA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGACAATGATGATGGCTaGAGCTCCTCTATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQDNDDG*SSSIVG
Trigger: ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTC...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp AGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGACAATGATGATGGCTaGAGCTCCTCTATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: SSLVWIKSVQMSRGQALEDNDDG*SSSIVG
Trigger: ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTC...CTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGACAATGATGATGGCTaGAGCTCCTCTATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGDNDDG*SSSIVG
Trigger: ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CCAAGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: PRGSSLVWIKSVQMSRGQATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...TTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: QLFGLDKVSANVQGSSSGATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...TCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS TCA 90 bp GCTTCTTCTTGCTGGCAGTTAGGTAGAGGTTGCTGTCATCACTGTTaGTGCCTAAAGAAGGGTGGAAAATATGTGAAGCAGGGATTGGAG +
Preference number: 5 (lower is better)
Translates to: ASSCWQLGRGCCHHC*CLKKGGKYVKQGLE
Trigger: CTCCAATCCCTGCTTCACATATTTTCCACCCTTCTTTAGGCATCAACAGTGATGACAGCAACCTCTACCTAACTGCCAGCAAGAAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474704.1
CDS-3UTR CAA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGACAATGATGATGGCTaGAGCTCCTCTATAGTAGGT +
Preference number: 5 (lower is better)
Translates to: IRHSERLESLSILKHKGPDNDDG*SSSIVG
Trigger: ACCTACTATAGAGGAGCTCAAGCCATCATCATTGTC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp TTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: FGLDKVSANVQGSSSGGMATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...CATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp ATAAGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCGCCACATCATTCAGGTaGAAGACAATGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: IRHSERLESLSILKHKGPATSFR*KTMMMA
Trigger: AGCCATCATCATTGTCTTCAACCTGAATGATGTGGC...GGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp AGGCACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: RHSERLESLSILKHKGPSLSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...GCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp GGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTCTGGAGGAATGAGGTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: GLDKVSANVQGSSSGGMRLSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...CCTCATTCCTCCAGAGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp CACAGTGAGAGGCTGGAATCATTAAGCATCCTCAAACACAAAGGGCCCAGCAGGTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: HSERLESLSILKHKGPSRLSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...CCTGCTGGGCCCTTTGTGTTTGAGGATGCTTAATGATTCCAGCCTCTCACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS-3UTR CAA 90 bp GCTGCCACACGGAAGAAGAATTCTCGGACATTCTCACCAGTGAGAGATGAGACTTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: AATRKKNSRTFSPVRDETLSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...AGTCTCATCTCTCACTGGTGAGAATGTCCGAGAATTCTTCTTCCGTGTGGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636772.1
CDS-3UTR CAA 90 bp AGAGGCAGCTCTTTGGTCTGGATAAAGTCAGTGCAAATGTCCAGGGGTCAAGCTTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: RGSSLVWIKSVQMSRGQALSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...AGCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301043.10
ENST00000395243.7
ENST00000395245.9
ENST00000422279.6
ENST00000450529.5
CDS-3UTR CAA 90 bp TCCAATGGTGGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATCCAAGAGGCAGCTCTTaGGTCTGGATAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SNGGLVILIKGVFAEPINPRGSS*VWIKSV
Trigger: CACTGACTTTATCCAGACCAAAGAGCTGCCTCTTGG...ATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCCACCATTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395243.7
CDS-3UTR CAA 90 bp CTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTCTTCCCACCACAATGACCTaGGAGATCTTAAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: LVILIKGVFAEPINEASLPTTMT*EILNLP
Trigger: GGGCAGATTTAAGATCTCCAAGGTCATTGTGGTGGG...AAGACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636154.2
CDS-3UTR CAA 90 bp GGCCTTGTAATTCTTATCAAAGGTGTCTTTGCAGAACCTATTAATGAGGCAAGTTTATCAAAGGTGTCTTaGCAGAACCTATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: GLVILIKGVFAEPINEASLSKVS*QNLLMR
Trigger: CCTCATTAATAGGTTCTGCAAAGACACCTTTGATAA...ACTTGCCTCATTAATAGGTTCTGCAAAGACACCTTTGATAAGAATTACAAGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395243.7
ENST00000636154.2
CDS CCA 72 bp CGCCGAGGCCGGATCCGCGTCAGCGACCCGGGCGCGTaGAGACCCGACGATCACCCGCGGCCGGGGTGTCCC +
Preference number: 6 (lower is better)
Translates to: RRGRIRVSDPGA*RPDDHPRPGCP
Trigger: GGGACACCCCGGCCGCGGGTGATCGTCGGGTCTCCACGCGCCCGGGTCGCTGACGCGGATCCGGCCTCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000301043.10
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000419712.7
ENST00000422279.6
ENST00000482688.5
ENST00000483554.1
ENST00000580843.6
ENST00000582934.1
ENST00000636154.2
ENST00000636513.1
ENST00000636534.2
ENST00000636772.1
CDS CAA 90 bp CGATCCCTCCGCACGGGTGCCAGAATGTTCATCCTGCCTGCGGCCTaGCAGGGCGCCCTGAGAAGGCGCCGAGGCCGGATCCGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: RSLRTGARMFILPAA*QGALRRRRGRIRVS
Trigger: GCTGACGCGGATCCGGCCTCGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000301043.10
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000419712.7
ENST00000422279.6
ENST00000482688.5
ENST00000483554.1
ENST00000580843.6
ENST00000582934.1
ENST00000636154.2
ENST00000636513.1
ENST00000636534.2
ENST00000636772.1
CDS TCA 72 bp GAATGTTCATCCTGCCTGCGGCCTTGCAGGGCGCCCTaGGAAGGCGCCGAGGCCGGATCCGCGTCAGCGACC +
Preference number: 6 (lower is better)
Translates to: ECSSCLRPCRAP*EGAEAGSASAT
Trigger: GGTCGCTGACGCGGATCCGGCCTCGGCGCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000301043.10
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000415040.6
ENST00000419712.7
ENST00000422279.6
ENST00000482688.5
ENST00000483554.1
ENST00000580843.6
ENST00000582934.1
ENST00000636154.2
ENST00000636513.1
ENST00000636534.2
ENST00000636772.1
CDS GCA 72 bp TGGGTGTCCCTAACTCACCCCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTGACGCGGGGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: WVSLTHPTVPVR*SWQAQVTRGWK
Trigger: CTTCCACCCCCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGGTGAGTTAGGGACACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS GCA 72 bp CGCGATCCCTCCGCACGGGTGCCAGAATGTTCATCCTaGCTGCGGCCTTGCAGGGCGCCCCAGCCGAATTGG +
Preference number: 6 (lower is better)
Translates to: RDPSARVPECSS*LRPCRAPQPNW
Trigger: CCAATTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGATCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436730.7
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS TCA 72 bp TGCCTGCGGCCTTGCAGGGCGCCCCAGCCGAATTGGTaGTGGGGAATCGGAGACTGCTGCGCAGCATCTGGC +
Preference number: 6 (lower is better)
Translates to: CLRPCRAPQPNW*WGIGDCCAASG
Trigger: GCCAGATGCTGCGCAGCAGTCTCCGATTCCCCATCACCAATTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453384.7
CDS GCA 72 bp CCTCAACTCCAGGCCTGGGAGGTGACTCATAGAGTCTaGCCCCTCTCGCCCTTCTGCCCTGGGAGGTCGGGG +
Preference number: 6 (lower is better)
Translates to: PQLQAWEVTHRV*PLSPFCPGRSG
Trigger: CCCCGACCTCCCAGGGCAGAAGGGCGAGAGGGGGCAGACTCTATGAGTCACCTCCCAGGCCTGGAGTTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000430132.6
CDS GCA 72 bp AAGGTGTCTTTGCAGAACCCCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTGACGCGGGGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: KVSLQNPTVPVR*SWQAQVTRGWK
Trigger: CTTCCACCCCCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGGTTCTGCAAAGACACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415040.6
CDS TCA 72 bp GGGAGTCCGCGGTCTCGGAGACGCCAGCCGAATTGGTaGTGGGGAATCGGAGACTGCTGCGCAGCATCTGGC +
Preference number: 6 (lower is better)
Translates to: GSPRSRRRQPNW*WGIGDCCAASG
Trigger: GCCAGATGCTGCGCAGCAGTCTCCGATTCCCCATCACCAATTCGGCTGGCGTCTCCGAGACCGCGGACTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301043.10
ENST00000415040.6
ENST00000636534.2
CDS TCA 72 bp TCTCGGAGACGCTACGACCACCGCGGGCCACGGAGATaGAACAATCACCCGGGGCCGCGGCGAGCCCAAAAT +
Preference number: 6 (lower is better)
Translates to: SRRRYDHRGPRR*NNHPGPRRAQN
Trigger: ATTTTGGGCTCGCCGCGGCCCCGGGTGATTGTTTCATCTCCGTGGCCCGCGGTGGTCGTAGCGTCTCCGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000483554.1
ENST00000580843.6
ENST00000582934.1
ENST00000636154.2
ENST00000636513.1
ENST00000636772.1
CDS GCA 72 bp ATCCCTCCGCACGGGTGCCAGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCGAGGAGAGAGACGTCT +
Preference number: 6 (lower is better)
Translates to: IPPHGCQNVHPA*GLAGRPRRETS
Trigger: AGACGTCTCTCTCCTCGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412625.5
CDS CCA 72 bp AAGGAGAGGCGGCGCTTCCCTCCTCAACTCCAGGCCTaGGAGGTGACTCATAGAGTCTGCCCCCTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: KERRRFPPQLQA*EVTHRVCPLSP
Trigger: GGGCGAGAGGGGGCAGACTCTATGAGTCACCTCCCAGGCCTGGAGTTGAGGAGGGAAGCGCCGCCTCTCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000430132.6
CDS TCA 72 bp AGCCCAAAATCACCCGGGCCCTGGGCGTCCCGAAGATaGCTCTGGGGCGAGGAGACTCTTCGGCCGCCAATT +
Preference number: 6 (lower is better)
Translates to: SPKSPGPWASRR*LWGEETLRPPI
Trigger: AATTGGCGGCCGAAGAGTCTCCTCGCCCCAGAGTCATCTTCGGGACGCCCAGGGCCCGGGTGATTTTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000483554.1
ENST00000580843.6
ENST00000582934.1
ENST00000636154.2
ENST00000636513.1
ENST00000636772.1
CDS GCA 72 bp ACCTTGGAGATCTTAAATCCCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAGGTGACGCGGGGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: TLEILNPTVPVR*SWQAQVTRGWK
Trigger: CTTCCACCCCCGCGTCACCTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGATTTAAGATCTCCAAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301043.10
ENST00000353676.9
ENST00000395243.7
ENST00000395245.9
ENST00000412625.5
ENST00000419712.7
ENST00000422279.6
ENST00000436730.7
ENST00000450529.5
CDS GCA 72 bp ATCCCTCCGCACGGGTGCCAGAATGTTCATCCTGCCTaGGGCCTTGCAGGGCGCCCCAGCCGAATTGGTGAT +
Preference number: 6 (lower is better)
Translates to: IPPHGCQNVHPA*GLAGRPSRIGD
Trigger: ATCACCAATTCGGCTGGGGCGCCCTGCAAGGCCGCAGGCAGGATGAACATTCTGGCACCCGTGCGGAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436730.7
ENST00000450529.5
ENST00000453384.7
ENST00000625712.2
CDS GCA 72 bp GAAGCGTGCGAAGGGGGTGCCAGGGTTAGAATGAGGTaGCCACCGAGGAGAGAGACGTCTGAAGTCTGGCGT +
Preference number: 6 (lower is better)
Translates to: EACEGGARVRMR*PPRRETSEVWR
Trigger: ACGCCAGACTTCAGACGTCTCTCTCCTCGGTGGGCACCTCATTCTAACCCTGGCACCCCCTTCGCACGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301043.10
ENST00000430132.6
CDS CAA 90 bp TACCCTCGCTATGACTACAGAGTTTCCTGGGACCTCCTCTCTTTGTaGTGGGTGTCCCTAACTCACCCCACGGTGCCTGTCCGGTGCTCC +
Preference number: 6 (lower is better)
Translates to: YPRYDYRVSWDLLSL*WVSLTHPTVPVRCS
Trigger: GGAGCACCGGACAGGCACCGTGGGGTGAGTTAGGGACACCCACAACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTCATAGCGAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS CCA 72 bp GGGTATTATAGACACCAGGCATCCCAGGCAGCTGCGTaGACAGGTGTGCTGGGGAGGAGGAGTGTTTTGTGC +
Preference number: 6 (lower is better)
Translates to: GYYRHQASQAAA*TGVLGRRSVLC
Trigger: GCACAAAACACTCCTCCTCCCCAGCACACCTGTCCACGCAGCTGCCTGGGATGCCTGGTGTCTATAATACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481501.1
CDS CCA 72 bp GACTACAGAGTTTCCTGGGACCTCCTCTCTTTGTTGTaGGTGTCCCTAACTCACCCCACGGTGCCTGTCCGG +
Preference number: 6 (lower is better)
Translates to: DYRVSWDLLSLL*VSLTHPTVPVR
Trigger: CCGGACAGGCACCGTGGGGTGAGTTAGGGACACCCACAACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS CAA 72 bp TGCCCAGCGGTATCCCAAAGCTGCAAACCAGCCGAATaGGTGATGGGGAATCGGAGACTGCTGCGCAGCATC +
Preference number: 6 (lower is better)
Translates to: CPAVSQSCKPAE*VMGNRRLLRSI
Trigger: GATGCTGCGCAGCAGTCTCCGATTCCCCATCACCAATTCGGCTGGTTTGCAGCTTTGGGATACCGCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583538.5
CDS CAA 90 bp GTTTACCCTCGCTATGACTACAGAGTTTCCTGGGACCTCCTCTCTTaGTTGTGGGTGTCCCTAACTCACCCCACGGTGCCTGTCCGGTGC +
Preference number: 6 (lower is better)
Translates to: VYPRYDYRVSWDLLS*LWVSLTHPTVPVRC
Trigger: GCACCGGACAGGCACCGTGGGGTGAGTTAGGGACACCCACAACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTCATAGCGAGGGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS GCA 72 bp TATGTGAAGCAGGGATTGGAGGCTCACTGTGCCCTCTaGCACCCTCAACCAGGCAAGCACTCACGGACAACA +
Preference number: 6 (lower is better)
Translates to: YVKQGLEAHCAL*HPQPGKHSRTT
Trigger: TGTTGTCCGTGAGTGCTTGCCTGGTTGAGGGTGGCAGAGGGCACAGTGAGCCTCCAATCCCTGCTTCACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474704.1
CDS TCA 72 bp GCCACCTGGAGGGCGTCTTTCTCCATCAGCGCATACTaGGCAGGGGTACTCAGATCCTTCTTGGAACTTGGT +
Preference number: 6 (lower is better)
Translates to: ATWRASFSISAY*AGVLRSFLELG
Trigger: ACCAAGTTCCAAGAAGGATCTGAGTACCCCTGCTCAGTATGCGCTGATGGAGAAAGACGCCCTCCAGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS GCA 72 bp TGGAAAATATGTGAAGCAGGGATTGGAGGCTCACTGTaGCCTCTGCCACCCTCAACCAGGCAAGCACTCACG +
Preference number: 6 (lower is better)
Translates to: WKICEAGIGGSL*PLPPSTRQALT
Trigger: CGTGAGTGCTTGCCTGGTTGAGGGTGGCAGAGGGCACAGTGAGCCTCCAATCCCTGCTTCACATATTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474704.1
CDS CCA 72 bp CTTGCAGGGCGCCCGAGGAGAGAGACGTCTGAAGTCTaGCGTCTTTTCCTTCAAGGCTGCTGTGTAGATTGT +
Preference number: 6 (lower is better)
Translates to: LAGRPRRETSEV*RLFLQGCCVDC
Trigger: ACAATCTACACAGCAGCCTTGAAGGAAAAGACGCCAGACTTCAGACGTCTCTCTCCTCGGGCGCCCTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412625.5
CDS CAA 72 bp CGCTATGACTACAGAGTTTCCTGGGACCTCCTCTCTTaGTTGTGGGTGTCCCTAACTCACCCCACGGTGCCT +
Preference number: 6 (lower is better)
Translates to: RYDYRVSWDLLS*LWVSLTHPTVP
Trigger: AGGCACCGTGGGGTGAGTTAGGGACACCCACAACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTCATAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS TCA 72 bp GCTGGAAGGGGTGTGGAAGCACTCACAGCTGCAAACTaGAGGGAATGCCCAGCACCTCAAATCGTTCCATCT +
Preference number: 6 (lower is better)
Translates to: AGRGVEALTAAN*RECPAPQIVPS
Trigger: AGATGGAACGATTTGAGGTGCTGGGCATTCCCTTCAGTTTGCAGCTGTGAGTGCTTCCACACCCCTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481501.1
CDS TCA 72 bp GGGGCTCCATGGATGCTATGTGGGGATCTGAGCAGGTaGCCACCTTCCCATTTCAGACACCTTAGTCTCTAC +
Preference number: 6 (lower is better)
Translates to: GAPWMLCGDLSR*PPSHFRHLSLY
Trigger: GTAGAGACTAAGGTGTCTGAAATGGGAAGGTGGTCACCTGCTCAGATCCCCACATAGCATCCATGGAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483554.1
CDS GCA 72 bp AGGGATAGCTGGAAGGGGTGTGGAAGCACTCACAGCTaGAAACTGAAGGGAATGCCCAGCACCTCAAATCGT +
Preference number: 6 (lower is better)
Translates to: RDSWKGCGSTHS*KLKGMPSTSNR
Trigger: ACGATTTGAGGTGCTGGGCATTCCCTTCAGTTTGCAGCTGTGAGTGCTTCCACACCCCTTCCAGCTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481501.1
CDS CAA 72 bp TATGACTACAGAGTTTCCTGGGACCTCCTCTCTTTGTaGTGGGTGTCCCTAACTCACCCCACGGTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: YDYRVSWDLLSL*WVSLTHPTVPV
Trigger: GACAGGCACCGTGGGGTGAGTTAGGGACACCCACAACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS TCA 72 bp TGTCACAGCAGAGCCCTAAAGCCTCCAACTCACCAGTaGGAGATGAGACTGCCCAGTACTCAGCCTTCATCT +
Preference number: 6 (lower is better)
Translates to: CHSRALKPPTHQ*EMRLPSTQPSS
Trigger: AGATGAAGGCTGAGTACTGGGCAGTCTCATCTCTCACTGGTGAGTTGGAGGCTTTAGGGCTCTGCTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474704.1
ENST00000496866.1
CDS TCA 72 bp ATGAAGCCCCAAGGGGGTGGTTGTTTACCCTCGCTATaGCTACAGAGTTTCCTGGGACCTCCTCTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: MKPQGGGCLPSL*LQSFLGPPLFV
Trigger: AACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTCATAGCGAGGGTAAACAACCACCCCCTTGGGGCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS CCA 72 bp GTGGTTGTTTACCCTCGCTATGACTACAGAGTTTCCTaGGACCTCCTCTCTTTGTTGTGGGTGTCCCTAACT +
Preference number: 6 (lower is better)
Translates to: VVVYPRYDYRVS*DLLSLLWVSLT
Trigger: AGTTAGGGACACCCACAACAAAGAGAGGAGGTCCCAGGAAACTCTGTAGTCATAGCGAGGGTAAACAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482688.5
ENST00000483554.1
CDS CCA 72 bp TCAGCGCATACTGAGCAGGGGTACTCAGATCCTTCTTaGAACTTGGTATGTTCCAGAGATGCCACATCATTC +
Preference number: 6 (lower is better)
Translates to: SAHTEQGYSDPS*NLVCSRDATSF
Trigger: GAATGATGTGGCATCTCTGGAACATACCAAGTTCCAAGAAGGATCTGAGTACCCCTGCTCAGTATGCGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422279.6
CDS GCA 72 bp ATTTCAGACACCTTAGTCTCTACTCAGAAATCCAGCTaGCACCCTTCTACCCAACCCCATCTCATAGAACTC +
Preference number: 6 (lower is better)
Translates to: ISDTLVSTQKSS*HPSTQPHLIEL
Trigger: GAGTTCTATGAGATGGGGTTGGGTAGAAGGGTGGCAGCTGGATTTCTGAGTAGAGACTAAGGTGTCTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483554.1
CDS CCA 72 bp AGGTTGCTGTCATCACTGTTGATGCCTAAAGAAGGGTaGAAAATATGTGAAGCAGGGATTGGAGGCTCACTG +
Preference number: 6 (lower is better)
Translates to: RLLSSLLMPKEG*KICEAGIGGSL
Trigger: CAGTGAGCCTCCAATCCCTGCTTCACATATTTTCCACCCTTCTTTAGGCATCAACAGTGATGACAGCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474704.1
CDS TCA 72 bp TGCTGGCAGTTAGGTAGAGGTTGCTGTCATCACTGTTaGTGCCTAAAGAAGGGTGGAAAATATGTGAAGCAG +
Preference number: 6 (lower is better)
Translates to: CWQLGRGCCHHC*CLKKGGKYVKQ
Trigger: CTGCTTCACATATTTTCCACCCTTCTTTAGGCATCAACAGTGATGACAGCAACCTCTACCTAACTGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474704.1
CDS GCA 72 bp CTCAGATCCTTCTTGGAACTTGGTATGTTCCAGAGATaGCACATCATTCAGGTTGAAGACAATGATGATGGC +
Preference number: 6 (lower is better)
Translates to: LRSFLELGMFQR*HIIQVEDNDDG
Trigger: GCCATCATCATTGTCTTCAACCTGAATGATGTGGCATCTCTGGAACATACCAAGTTCCAAGAAGGATCTGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422279.6