Pregenerated sensors for RAB33A (Homo sapiens)
Ensembl gene IDs: ENSG00000134594Ensembl transcript IDs: ENST00000257017.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAATGGCCCAGGATGGGCTaGGCCATCTCCCCCGGACCG | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKWPRMG*AISPGP Trigger: CGGTCCGGGGGAGATGGCGCAGCCCATCCTGGGCCA...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAATCCCATGGCCCAGGATaGGCTGCGCCATCTCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: DINLYGNKQVSALCRHRKSHGPG*AAPSPP Trigger: CGGGGGAGATGGCGCAGCCCATCCTGGGCCATGGGA...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGGCTGCAGGCTCCCATaGCCCAGGATGGGCTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTGCRLP*PRMGCA Trigger: GGCGCAGCCCATCCTGGGCCATGGGAGCCTGCAGCC...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR TCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACACCACGGTCTTCTCCCTaGAGTCCACGCCGATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTPRSSP*SPRRWW Trigger: CCACCATCGGCGTGGACTTCAGGGAGAAGACCGTGG...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAAGGTCAGGCAGGTCTTaGCCACGTTGGAGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTRSGRS*PRWSPQ Trigger: TTGGGGACTCCAACGTGGGCAAGACCTGCCTGACCT...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAATTCTGCACCTTCCCCTaGTGCCTCTCAGCATCACGA | + |
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Preference number: 4 (lower is better) Translates to: DINLYGNKQVSALCRHRKFCTFP*CLSASR Trigger: TCGTGATGCTGAGAGGCAGCAGGGGAAGGTGCAGAA...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGGGAACTCCAGTTTCTaGACCTTCCCCTGCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTGNSSF*TFPCCL Trigger: GAGGCAGCAGGGGAAGGTGCAGAAACTGGAGTTCCC...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAACGAATCTGCACGTACTaGTCCAGCGACGAGTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKRICTY*SSDESS Trigger: GCTCGACTCGTCGCTGGACCAGTACGTGCAGATTCG...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAGGCTTCAGTCTTGTCTaGGAAGGTACCCCCGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: DINLYGNKQVSALCRHRKGFSLV*EGTPAE Trigger: TTCTGCGGGGGTACCTTCCCAGACAAGACTGAAGCC...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACATGCCCACAAGCACTTTaGGGACTAGTGGGGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTCPQAL*GLVGAQ Trigger: CTGTGCCCCCACTAGTCCCCAAAGTGCTTGTGGGCA...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR TCA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAACCCACACCTGAACCTTaGTCTTCTCGCCCTCGATTT | + |
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Preference number: 4 (lower is better) Translates to: DINLYGNKQVSALCRHRKPTPEP*SSRPRF Trigger: AAATCGAGGGCGAGAAGATCAAGGTTCAGGTGTGGG...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | TTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGACCACGGCATGTACGTTaGGGTAGTAATGCTCGACCA | + |
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Preference number: 4 (lower is better) Translates to: FDINLYGNKQVSALCRHRPRHVR*GSNARP Trigger: TGGTCGAGCATTACTACCGCAACGTACATGCCGTGG...TCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAATGCACCTTCCCCTGCTaGCTCTCAGCATCACGATAC | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKCTFPC*LSASRY Trigger: GTATCGTGATGCTGAGAGGCAGCAGGGGAAGGTGCA...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAAGTCCACGCCGATGGTaGCTTCAGTCTTGTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTSPRRW*LQSCLG Trigger: TCCCAGACAAGACTGAAGCCACCATCGGCGTGGACT...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAATCGACTCCACGTTCTaGCTCTCTTTGGGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: DINLYGNKQVSALCRHRKIDSTF*LSLGSL Trigger: CAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGAT...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR TCA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAGGCAAGCCAAGCACATaGAAATCGACTCCACGTTCT | + |
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Preference number: 4 (lower is better) Translates to: DINLYGNKQVSALCRHRKGKPST*KSTPRS Trigger: AGAACGTGGAGTCGATTTTCATGTGCTTGGCTTGCC...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGCTCGACCATGCTTTTaGGGAAACGTTCCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTARPCF*GNVPDL Trigger: CAGGTCAGGAACGTTTCCGCAAAAGCATGGTCGAGC...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAAAGTGGGGGCACAGCATaGCCATTGCATTCTTGGATC | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKSGGTA*PLHSWI Trigger: GATCCAAGAATGCAATGGGCATGCTGTGCCCCCACT...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAATACAGCAGGGATTTCTaGGCCTTCAATCGGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKYSRDF*AFNRQA Trigger: GGCTTGCCGATTGAAGGCCCAGAAATCCCTGCTGTA...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACATTGAAGATGCGAATCTaGACGTACTGGTCCAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTLKMRI*TYWSSD Trigger: GTCGCTGGACCAGTACGTGCAGATTCGCATCTTCAA...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | TTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGATCAAGTCACACTTGTTaGCCACAAGCACTTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FDINLYGNKQVSALCRHRSSHTC*PQALWG Trigger: TCCCCAAAGTGCTTGTGGGCAACAAGTGTGACTTGA...TCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAAAAGTTGGAGGGCACCTaGATCTGTTCCCTCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKKLEGT*ICSLKS Trigger: TGACTTGAGGGAACAGATCCAGGTGCCCTCCAACTT...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAATTTCAGGGCTAAGTTaGAGGGCACCTGGATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: DINLYGNKQVSALCRHRKISGLS*RAPGSV Trigger: AACAGATCCAGGTGCCCTCCAACTTAGCCCTGAAAT...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | TTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAACTGTTAGCTTCCTGTaGGAACTCCAGTTTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: FDINLYGNKQVSALCRHRTVSFL*ELQFLH Trigger: GTGCAGAAACTGGAGTTCCCACAGGAAGCTAACAGT...TCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACATCTCTTTGGGGTCCTTaGCCGATGTCTCAAACAAGA | + |
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Preference number: 4 (lower is better) Translates to: ILISICMETSRCQHYAGTSLWGP*PMSQTR Trigger: TCTTGTTTGAGACATCGGCCAAGGACCCCAAAGAGA...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR TCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAAAAGATGTCATCTTGGTaGCGTCATAGACGAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKKMSSW*RHRRRP Trigger: TGGTCTTCGTCTATGACGTCACCAAGATGACATCTT...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAAAGTAATGCTCGACCATaGTTTTGCGGAAACGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKSNARP*FCGNVP Trigger: AGGAACGTTTCCGCAAAAGCATGGTCGAGCATTACT...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR GCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAAGCACAGCATGCCCATTaGATTCTTGGATCCACATTT | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKAQHAH*ILGSTF Trigger: AAATGTGGATCCAAGAATGCAATGGGCATGCTGTGC...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR TCA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAACAATCACGATTATTTTaGAGATGCGAATCTGCACGT | + |
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Preference number: 4 (lower is better) Translates to: DINLYGNKQVSALCRHRKQSRLF*RCESAR Trigger: ACGTGCAGATTCGCATCTTCAAAATAATCGTGATTG...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CCA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAAAACAAGAGCATGTTGTaGGCATCAGCAAATTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISICMETSRCQHYAGTEKNKSML*ASANFR Trigger: CCTGAAATTTGCTGATGCCCACAACATGCTCTTGTT...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 90 bp | TCCAGGGACGCCAGGCCAGCGGCCGAGGCGGGCTGCAGGCTCCCATaGCCCAGGATGGGCTGCGCCATCTCCCCCGGACCGAACCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SRDARPAAEAGCRLP*PRMGCAISPGPNRG Trigger: GCCCCGGTTCGGTCCGGGGGAGATGGCGCAGCCCATCCTGGGCCATGGGAGCCTGCAGCCCGCCTCGGCCGCTGGCCTGGCGTCCCTGGA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS GCA 90 bp | GACGAGTCGAGCTCCAGGGACGCCAGGCCAGCGGCCGAGGCGGGCTaGAGGCTCCCATGGCCCAGGATGGGCTGCGCCATCTCCCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: DESSSRDARPAAEAG*RLPWPRMGCAISPG Trigger: TCCGGGGGAGATGGCGCAGCCCATCCTGGGCCATGGGAGCCTGCAGCCCGCCTCGGCCGCTGGCCTGGCGTCCCTGGAGCTCGACTCGTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS GCA 90 bp | CTAAGTTGGAGGGCACCTGGATCTGTTCCCTCAAGTCACACTTGTTaGCCACAAGCACTTTGGGGACTAGTGGGGGCACAGCATGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LSWRAPGSVPSSHTC*PQALWGLVGAQHAH Trigger: ATGGGCATGCTGTGCCCCCACTAGTCCCCAAAGTGCTTGTGGGCAACAAGTGTGACTTGAGGGAACAGATCCAGGTGCCCTCCAACTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS TCA 90 bp | GATACAGCAGGGATTTCTGGGCCTTCAATCGGCAAGCCAAGCACATaGAAATCGACTCCACGTTCTGGCTCTCTTTGGGGTCCTTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: DTAGISGPSIGKPST*KSTPRSGSLWGPWP Trigger: CGGCCAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGATTTTCATGTGCTTGGCTTGCCGATTGAAGGCCCAGAAATCCCTGCTGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 90 bp | ACCTTCCCCTGCTGCCTCTCAGCATCACGATACAGCAGGGATTTCTaGGCCTTCAATCGGCAAGCCAAGCACATGAAAATCGACTCCACG | + |
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Preference number: 5 (lower is better) Translates to: TFPCCLSASRYSRDF*AFNRQAKHMKIDST Trigger: CGTGGAGTCGATTTTCATGTGCTTGGCTTGCCGATTGAAGGCCCAGAAATCCCTGCTGTATCGTGATGCTGAGAGGCAGCAGGGGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS GCA 90 bp | CTGTTAGCTTCCTGTGGGAACTCCAGTTTCTGCACCTTCCCCTGCTaGCTCTCAGCATCACGATACAGCAGGGATTTCTGGGCCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: LLASCGNSSFCTFPC*LSASRYSRDFWAFN Trigger: ATTGAAGGCCCAGAAATCCCTGCTGTATCGTGATGCTGAGAGGCAGCAGGGGAAGGTGCAGAAACTGGAGTTCCCACAGGAAGCTAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS GCA 90 bp | TTACTGTTAGCTTCCTGTGGGAACTCCAGTTTCTGCACCTTCCCCTaGTGCCTCTCAGCATCACGATACAGCAGGGATTTCTGGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: LLLASCGNSSFCTFP*CLSASRYSRDFWAF Trigger: GAAGGCCCAGAAATCCCTGCTGTATCGTGATGCTGAGAGGCAGCAGGGGAAGGTGCAGAAACTGGAGTTCCCACAGGAAGCTAACAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS GCA 90 bp | GGACAGGAAGTTTTACTGTTAGCTTCCTGTGGGAACTCCAGTTTCTaGACCTTCCCCTGCTGCCTCTCAGCATCACGATACAGCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: GQEVLLLASCGNSSF*TFPCCLSASRYSRD Trigger: ATCCCTGCTGTATCGTGATGCTGAGAGGCAGCAGGGGAAGGTGCAGAAACTGGAGTTCCCACAGGAAGCTAACAGTAAAACTTCCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 90 bp | GCCTTCAATCGGCAAGCCAAGCACATGAAAATCGACTCCACGTTCTaGCTCTCTTTGGGGTCCTTGGCCGATGTCTCAAACAAGAGCATG | + |
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Preference number: 5 (lower is better) Translates to: AFNRQAKHMKIDSTF*LSLGSLADVSNKSM Trigger: CATGCTCTTGTTTGAGACATCGGCCAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGATTTTCATGTGCTTGGCTTGCCGATTGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 90 bp | ATGTTGTGGGCATCAGCAAATTTCAGGGCTAAGTTGGAGGGCACCTaGATCTGTTCCCTCAAGTCACACTTGTTGCCCACAAGCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: MLWASANFRAKLEGT*ICSLKSHLLPTSTL Trigger: CAAAGTGCTTGTGGGCAACAAGTGTGACTTGAGGGAACAGATCCAGGTGCCCTCCAACTTAGCCCTGAAATTTGCTGATGCCCACAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAATTGCCCACAAGCACTTaGGGGACTAGTGGGGGCACA | + |
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Preference number: 5 (lower is better) Translates to: ISICMETSRCQHYAGTEKLPTST*GTSGGT Trigger: TGTGCCCCCACTAGTCCCCAAAGTGCTTGTGGGCAA...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAACGTTCTGGCTCTCTTaGGGGTCCTTGGCCGATGTC | + |
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Preference number: 5 (lower is better) Translates to: ILISICMETSRCQHYAGTTFWLS*GSLADV Trigger: GACATCGGCCAAGGACCCCAAAGAGAGCCAGAACGT...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAACTCAAGTCACACTTGTaGCCCACAAGCACTTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: DINLYGNKQVSALCRHRKLKSHL*PTSTLG Trigger: CCCCAAAGTGCTTGTGGGCAACAAGTGTGACTTGAG...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAACTCTCTTTGGGGTCCTaGGCCGATGTCTCAAACAAG | + |
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Preference number: 5 (lower is better) Translates to: DINLYGNKQVSALCRHRKLSLGS*ADVSNK Trigger: CTTGTTTGAGACATCGGCCAAGGACCCCAAAGAGAG...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAAATTTCAGGGCTAAGTaGGAGGGCACCTGGATCTGT | + |
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Preference number: 5 (lower is better) Translates to: DINLYGNKQVSALCRHRKNFRAK*EGTWIC Trigger: ACAGATCCAGGTGCCCTCCAACTTAGCCCTGAAATT...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGGCACAGCATGCCCATaGCATTCTTGGATCCACATT | + |
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Preference number: 5 (lower is better) Translates to: ILISICMETSRCQHYAGTGTACP*HSWIHI Trigger: AATGTGGATCCAAGAATGCAATGGGCATGCTGTGCC...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | ATTTTGATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACATCCCTCAAGTCACACTaGTTGCCCACAAGCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: ILISICMETSRCQHYAGTSLKSH*LPTSTL Trigger: CAAAGTGCTTGTGGGCAACAAGTGTGACTTGAGGGA...TGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | GATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAATCTTGGATCCACATTTaGAGGTTGGTGAAAGATGTC | + |
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Preference number: 5 (lower is better) Translates to: DINLYGNKQVSALCRHRKSWIHI*RLVKDV Trigger: GACATCTTTCACCAACCTCAAAATGTGGATCCAAGA...TTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAACCAATCACGATTATTTaGAAGATGCGAATCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: ISICMETSRCQHYAGTEKPITII*KMRICT Trigger: CGTGCAGATTCGCATCTTCAAAATAATCGTGATTGG...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS-3UTR CAA 90 bp | ATATCAATTTGTATGGAAACAAGCAGGTGTCAGCATTATGCAGGCACAGAAAAATCAAACAAGAGCATGTaGTGGGCATCAGCAAATTTC | + |
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Preference number: 5 (lower is better) Translates to: ISICMETSRCQHYAGTEKSNKSM*WASANF Trigger: GAAATTTGCTGATGCCCACAACATGCTCTTGTTTGA...TTTTTCTGTGCCTGCATAATGCTGACACCTGCTTGTTTCCATACAAATTGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS GCA 72 bp | AGCTCCAGGGACGCCAGGCCAGCGGCCGAGGCGGGCTaGAGGCTCCCATGGCCCAGGATGGGCTGCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SSRDARPAAEAG*RLPWPRMGCAI Trigger: GATGGCGCAGCCCATCCTGGGCCATGGGAGCCTGCAGCCCGCCTCGGCCGCTGGCCTGGCGTCCCTGGAGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 90 bp | GCTAAGTTGGAGGGCACCTGGATCTGTTCCCTCAAGTCACACTTGTaGCCCACAAGCACTTTGGGGACTAGTGGGGGCACAGCATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: AKLEGTWICSLKSHL*PTSTLGTSGGTACP Trigger: TGGGCATGCTGTGCCCCCACTAGTCCCCAAAGTGCTTGTGGGCAACAAGTGTGACTTGAGGGAACAGATCCAGGTGCCCTCCAACTTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 90 bp | AGGGCTAAGTTGGAGGGCACCTGGATCTGTTCCCTCAAGTCACACTaGTTGCCCACAAGCACTTTGGGGACTAGTGGGGGCACAGCATGC | + |
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Preference number: 6 (lower is better) Translates to: RAKLEGTWICSLKSH*LPTSTLGTSGGTAC Trigger: GCATGCTGTGCCCCCACTAGTCCCCAAAGTGCTTGTGGGCAACAAGTGTGACTTGAGGGAACAGATCCAGGTGCCCTCCAACTTAGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS GCA 72 bp | AGGGCACCTGGATCTGTTCCCTCAAGTCACACTTGTTaGCCACAAGCACTTTGGGGACTAGTGGGGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: RAPGSVPSSHTC*PQALWGLVGAQ Trigger: CTGTGCCCCCACTAGTCCCCAAAGTGCTTGTGGGCAACAAGTGTGACTTGAGGGAACAGATCCAGGTGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 72 bp | GAGGGCACCTGGATCTGTTCCCTCAAGTCACACTTGTaGCCCACAAGCACTTTGGGGACTAGTGGGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: EGTWICSLKSHL*PTSTLGTSGGT Trigger: TGTGCCCCCACTAGTCCCCAAAGTGCTTGTGGGCAACAAGTGTGACTTGAGGGAACAGATCCAGGTGCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 72 bp | TTGGAGGGCACCTGGATCTGTTCCCTCAAGTCACACTaGTTGCCCACAAGCACTTTGGGGACTAGTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LEGTWICSLKSH*LPTSTLGTSGG Trigger: GCCCCCACTAGTCCCCAAAGTGCTTGTGGGCAACAAGTGTGACTTGAGGGAACAGATCCAGGTGCCCTCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 72 bp | CGGCAAGCCAAGCACATGAAAATCGACTCCACGTTCTaGCTCTCTTTGGGGTCCTTGGCCGATGTCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: RQAKHMKIDSTF*LSLGSLADVSN Trigger: GTTTGAGACATCGGCCAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGATTTTCATGTGCTTGGCTTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 90 bp | CGGCAAGCCAAGCACATGAAAATCGACTCCACGTTCTGGCTCTCTTaGGGGTCCTTGGCCGATGTCTCAAACAAGAGCATGTTGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RQAKHMKIDSTFWLS*GSLADVSNKSMLWA Trigger: TGCCCACAACATGCTCTTGTTTGAGACATCGGCCAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGATTTTCATGTGCTTGGCTTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS TCA 72 bp | GGGATTTCTGGGCCTTCAATCGGCAAGCCAAGCACATaGAAATCGACTCCACGTTCTGGCTCTCTTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GISGPSIGKPST*KSTPRSGSLWG Trigger: ACCCCAAAGAGAGCCAGAACGTGGAGTCGATTTTCATGTGCTTGGCTTGCCGATTGAAGGCCCAGAAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 72 bp | GCATCAGCAAATTTCAGGGCTAAGTTGGAGGGCACCTaGATCTGTTCCCTCAAGTCACACTTGTTGCCCACA | + |
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Preference number: 6 (lower is better) Translates to: ASANFRAKLEGT*ICSLKSHLLPT Trigger: TGTGGGCAACAAGTGTGACTTGAGGGAACAGATCCAGGTGCCCTCCAACTTAGCCCTGAAATTTGCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 72 bp | GCATGTTGTGGGCATCAGCAAATTTCAGGGCTAAGTTaGAGGGCACCTGGATCTGTTCCCTCAAGTCACACT | + |
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Preference number: 6 (lower is better) Translates to: ACCGHQQISGLS*RAPGSVPSSHT Trigger: AGTGTGACTTGAGGGAACAGATCCAGGTGCCCTCCAACTTAGCCCTGAAATTTGCTGATGCCCACAACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 72 bp | AAATCGACTCCACGTTCTGGCTCTCTTTGGGGTCCTTaGCCGATGTCTCAAACAAGAGCATGTTGTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: KSTPRSGSLWGP*PMSQTRACCGH Trigger: ATGCCCACAACATGCTCTTGTTTGAGACATCGGCCAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CCA 72 bp | TGCTGCCTCTCAGCATCACGATACAGCAGGGATTTCTaGGCCTTCAATCGGCAAGCCAAGCACATGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: CCLSASRYSRDF*AFNRQAKHMKI Trigger: GATTTTCATGTGCTTGGCTTGCCGATTGAAGGCCCAGAAATCCCTGCTGTATCGTGATGCTGAGAGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 72 bp | AGCATGTTGTGGGCATCAGCAAATTTCAGGGCTAAGTaGGAGGGCACCTGGATCTGTTCCCTCAAGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: SMLWASANFRAK*EGTWICSLKSH Trigger: GTGTGACTTGAGGGAACAGATCCAGGTGCCCTCCAACTTAGCCCTGAAATTTGCTGATGCCCACAACATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 72 bp | AAAATCGACTCCACGTTCTGGCTCTCTTTGGGGTCCTaGGCCGATGTCTCAAACAAGAGCATGTTGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: KIDSTFWLSLGS*ADVSNKSMLWA Trigger: TGCCCACAACATGCTCTTGTTTGAGACATCGGCCAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 72 bp | AAGCACATGAAAATCGACTCCACGTTCTGGCTCTCTTaGGGGTCCTTGGCCGATGTCTCAAACAAGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: KHMKIDSTFWLS*GSLADVSNKSM Trigger: CATGCTCTTGTTTGAGACATCGGCCAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGATTTTCATGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 90 bp | AAGCACATGAAAATCGACTCCACGTTCTGGCTCTCTTTGGGGTCCTaGGCCGATGTCTCAAACAAGAGCATGTTGTGGGCATCAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: KHMKIDSTFWLSLGS*ADVSNKSMLWASAN Trigger: ATTTGCTGATGCCCACAACATGCTCTTGTTTGAGACATCGGCCAAGGACCCCAAAGAGAGCCAGAACGTGGAGTCGATTTTCATGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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| CDS CAA 72 bp | GGCACAGCATGCCCATTGCATTCTTGGATCCACATTTaGAGGTTGGTGAAAGATGTCATCTTGGTGACGTCA | + |
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Preference number: 6 (lower is better) Translates to: GTACPLHSWIHI*RLVKDVILVTS Trigger: TGACGTCACCAAGATGACATCTTTCACCAACCTCAAAATGTGGATCCAAGAATGCAATGGGCATGCTGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257017.5 |
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