RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB30 (Homo sapiens)

Ensembl gene IDs: ENSG00000137502

Ensembl transcript IDs: ENST00000260056.6, ENST00000524635.1, ENST00000525117.5, ENST00000526205.5, ENST00000527633.6, ENST00000528379.1, ENST00000530224.5, ENST00000531021.5, ENST00000532548.5, ENST00000533014.5, ENST00000533276.6, ENST00000533486.5, ENST00000534103.5, ENST00000534141.5, ENST00000534301.5, ENST00000612684.4

Found 704 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGAGGCCCTTaGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAA +
Preference number: 1 (lower is better)
Translates to: KPLYVLLMLACGRGP*PAMLCKLRSPQESE
Trigger: TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACAGGCCAGCATTAGCAGAACATATAATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR TCA 90 bp ATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTGCCTCAGCCTTTAGTTGAAATTACA +
Preference number: 1 (lower is better)
Translates to: IARSPQHLMAHQGSC*FLFFSVPQPLVEIT
Trigger: TGTAATTTCAACTAAAGGCTGAGGCACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534141.5
3UTR CCA 90 bp CGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTaGCCTAACAACGTGCAACCAACCTCTTCCCTGAAAGATAAAGGT +
Preference number: 1 (lower is better)
Translates to: RQSKSSIGHNGGPVS*PNNVQPTSSLKDKG
Trigger: ACCTTTATCTTTCAGGGAAGAGGTTGGTTGCACGTTGTTAGGCCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 90 bp GCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTaGCAGAGGCTATTACCTGAGGCAGACTGTCCCATAGTGAACCAA +
Preference number: 1 (lower is better)
Translates to: APISNQLDPLHIFAS*QRLLPEADCPIVNQ
Trigger: TTGGTTCACTATGGGACAGTCTGCCTCAGGTAATAGCCTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CCA 90 bp AACAAAGTCCCACATTCTCATGTGTTCCTGCTGATGGGCTGTGGATaGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGATAGA +
Preference number: 1 (lower is better)
Translates to: NKVPHSHVFLLMGCG*VSYGKAGRSNKEDR
Trigger: TCTATCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATCAGCAGGAACACATGAGAATGTGGGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR CCA 90 bp AAGAAACAAAGTCCCACATTCTCATGTGTTCCTGCTGATGGGCTGTaGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGA +
Preference number: 1 (lower is better)
Translates to: KKQSPTFSCVPADGL*MGKLWKGWEEQQGR
Trigger: TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATCAGCAGGAACACATGAGAATGTGGGACTTTGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR GCA 90 bp TTACAACCCTGGAATTGCCTATTGGGAGAGAGAGAGAGACCACCTTaGCTGAAGTTTGTAAAGAAATGGAGGGTGACAGTAGTAATGCCC +
Preference number: 1 (lower is better)
Translates to: LQPWNCLLGERERPP*LKFVKKWRVTVVMP
Trigger: GGGCATTACTACTGTCACCCTCCATTTCTTTACAAACTTCAGGCAAGGTGGTCTCTCTCTCTCTCCCAATAGGCAATTCCAGGGTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CCA 90 bp TTGGGAGAGAGAGAGAGACCACCTTGCCTGAAGTTTGTAAAGAAATaGAGGGTGACAGTAGTAATGCCCAAAGGCAAAAGGATGGATCAG +
Preference number: 1 (lower is better)
Translates to: LGERERPPCLKFVKK*RVTVVMPKGKRMDQ
Trigger: CTGATCCATCCTTTTGCCTTTGGGCATTACTACTGTCACCCTCCATTTCTTTACAAACTTCAGGCAAGGTGGTCTCTCTCTCTCTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CCA 90 bp CTGGTGGAATTATGGGCTAGCTTAAAGGGTAATGTGGCAAATCATTaGCCTAATTCTGTGGGAATCACCAGTGTCCTCCCAAGGCATATA +
Preference number: 1 (lower is better)
Translates to: LVELWASLKGNVANH*PNSVGITSVLPRHI
Trigger: TATATGCCTTGGGAGGACACTGGTGATTCCCACAGAATTAGGCCAATGATTTGCCACATTACCCTTTAAGCTAGCCCATAATTCCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR GCA 90 bp CAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTaGTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCT +
Preference number: 1 (lower is better)
Translates to: QHALQIMECLVQFSP*SNSRLEKGETIICS
Trigger: AGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR CCA 90 bp ATGGAATTTAGGTTAATAGGTCACCTGCTCCAATCTCCAACCAATTaGATCCTCTCCACATCTTTGCCTCTTGACAGAGGCTATTACCTG +
Preference number: 1 (lower is better)
Translates to: MEFRLIGHLLQSPTN*ILSTSLPLDRGYYL
Trigger: CAGGTAATAGCCTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCAGGTGACCTATTAACCTAAATTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CCA 90 bp GACTGCTTTATGTCAGTGACCCACCAGCCCATCTCTCTTGGGAGTTaGTCTGTTTGTGAGAACTTTAACAGAAGATTCTGCTCTGTTAAA +
Preference number: 1 (lower is better)
Translates to: DCFMSVTHQPISLGS*SVCENFNRRFCSVK
Trigger: TTTAACAGAGCAGAATCTTCTGTTAAAGTTCTCACAAACAGACCAACTCCCAAGAGAGATGGGCTGGTGGGTCACTGACATAAAGCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 90 bp TTCTGTGGGAATCACCAGTGTCCTCCCAAGGCATATATTCATGAATaGAAGAAGATAAGAACCCAGTCCTTTGCTAAATCTGGCGTCTCT +
Preference number: 1 (lower is better)
Translates to: FCGNHQCPPKAYIHE*KKIRTQSFAKSGVS
Trigger: AGAGACGCCAGATTTAGCAAAGGACTGGGTTCTTATCTTCTTTCATTCATGAATATATGCCTTGGGAGGACACTGGTGATTCCCACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR GCA 90 bp GTTCTAAGATTAAGCTTCCTGATAATGAGTTTACAACCCTGGAATTaGCTATTGGGAGAGAGAGAGAGACCACCTTGCCTGAAGTTTGTA +
Preference number: 1 (lower is better)
Translates to: VLRLSFLIMSLQPWN*LLGERERPPCLKFV
Trigger: TACAAACTTCAGGCAAGGTGGTCTCTCTCTCTCTCCCAATAGGCAATTCCAGGGTTGTAAACTCATTATCAGGAAGCTTAATCTTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 90 bp GTAACTTCTACTAAAACAATACCTTTTGATTCAACAGGACATCAATaGATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGG +
Preference number: 1 (lower is better)
Translates to: VTSTKTIPFDSTGHQ*MDRQSKSSIGHNGG
Trigger: CCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCATTCATTGATGTCCTGTTGAATCAAAAGGTATTGTTTTAGTAGAAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR GCA 90 bp TCTCTTGGGAGTTGGTCTGTTTGTGAGAACTTTAACAGAAGATTCTaGTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACACCC +
Preference number: 1 (lower is better)
Translates to: SLGSWSVCENFNRRF*SVKKAYPKILKETP
Trigger: GGGTGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTTAAAGTTCTCACAAACAGACCAACTCCCAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 90 bp CAATTCAAACATCATTTACAACTGACGTTTATTCAGTATGAGTCATaGACTGAAACTTGGTGTGGGATCTGGTGGAATTATGGGCTAGCT +
Preference number: 1 (lower is better)
Translates to: QFKHHLQLTFIQYES*TETWCGIWWNYGLA
Trigger: AGCTAGCCCATAATTCCACCAGATCCCACACCAAGTTTCAGTTCATGACTCATACTGAATAAACGTCAGTTGTAAATGATGTTTGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 90 bp TGGCTCCTTAAAAAGAAGATAGGGATCAACCCAGTTTTCTTCCCATaGAGAATAGGAACAAGAAGAAAGAGGTTTAAATTGCTCTGTGAG +
Preference number: 1 (lower is better)
Translates to: WLLKKKIGINPVFFP*RIGTRRKRFKLLCE
Trigger: CTCACAGAGCAATTTAAACCTCTTTCTTCTTGTTCCTATTCTTCATGGGAAGAAAACTGGGTTGATCCCTATCTTCTTTTTAAGGAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 90 bp ACTGTTAGGCAAACCAATAAATTTAGGTTCTGGCCTGGGTTAAGATaGCTGTATTTAGTGTCCTTTCTCAAGTTCTACTTGAAGGAATTT +
Preference number: 1 (lower is better)
Translates to: TVRQTNKFRFWPGLR*LYLVSFLKFYLKEF
Trigger: AAATTCCTTCAAGTAGAACTTGAGAAAGGACACTAAATACAGTCATCTTAACCCAGGCCAGAACCTAAATTTATTGGTTTGCCTAACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR CCA 90 bp GAAGCCAGGAAAGTTTCTTTGTTTTGTCTCTTAAGGATCTACACTTaGCATCAGACCATTCAAAGTCTGCTCTTAATTAAAGTGAAAAAG +
Preference number: 1 (lower is better)
Translates to: EARKVSLFCLLRIYT*HQTIQSLLLIKVKK
Trigger: CTTTTTCACTTTAATTAAGAGCAGACTTTGAATGGTCTGATGCCAAGTGTAGATCCTTAAGAGACAAAACAAAGAAACTTTCCTGGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 90 bp ATGTTTCACTTTAGTAGGAAGACCAATTCAAACATCATTTACAACTaGCGTTTATTCAGTATGAGTCATGAACTGAAACTTGGTGTGGGA +
Preference number: 1 (lower is better)
Translates to: MFHFSRKTNSNIIYN*RLFSMSHELKLGVG
Trigger: TCCCACACCAAGTTTCAGTTCATGACTCATACTGAATAAACGTCAGTTGTAAATGATGTTTGAATTGGTCTTCCTACTAAAGTGAAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCACATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTG +
Preference number: 2 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESHQGSC*FLFFSV
Trigger: CACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATG...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: QGPQMITTEALKKSSHMHALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTCTCCCCAGCATCTCATaGCCCATCAGGGCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: PDLPSISWPIRAVADSFSLPSIS*PIRAVA
Trigger: AGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAG...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGCTCCCCAGCATCTCATaGCCCATCAGGGCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVLPSIS*PIRAVA
Trigger: AGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAG...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGCTCCCCAGCATCTCATaGCCCATCAGGGCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGLPSIS*PIRAVA
Trigger: AGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAG...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGATGGTCGCCCTGACATaGAACCCAAATCTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWMVALT*NPNLCP
Trigger: GGGACACAGATTTGGGTTCCATGTCAGGGCGACCAT...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGATGGGTCATCATGTGCTaGGGACACTGGATTTTTGCC +
Preference number: 2 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRWVIMC*GHWIFA
Trigger: GGCAAAAATCCAGTGTCCCCAGCACATGATGACCCA...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGCATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTG +
Preference number: 2 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGHQGSC*FLFFSV
Trigger: CACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATG...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: SPCSNSRLEKGETIICSAALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGGTGCAATTTTCTCCTTaGTCCAACTCCAGACTGGAA +
Preference number: 2 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWVQFSP*SNSRLE
Trigger: TTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCAC...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCTGTGGTCGAGGCCCTTaGCCTGCCATGCTTTGTAAG +
Preference number: 2 (lower is better)
Translates to: KATCSADHGVPSAIFSLLCGRGP*PAMLCK
Trigger: CTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCGCTCCAACTCCAGACTaGAAAAGGGTGAAACCATTA +
Preference number: 2 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISAPTPD*KRVKPL
Trigger: TAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGC...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGATGGTCGCCCTGACATaGAACCCAAATCTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTEMVALT*NPNLCP
Trigger: GGGACACAGATTTGGGTTCCATGTCAGGGCGACCAT...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGGGAGAGGAGATGAAATaGCATCTCCCTTACTCTAAT +
Preference number: 2 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWGEEMK*HLPYSN
Trigger: ATTAGAGTAAGGGAGATGGCATTTCATCTCCTCTCC...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCACTTGGTGTGGGATCTaGTGGAATTATGGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLTWCGI*WNYGLA
Trigger: AGCTAGCCCATAATTCCACCAGATCCCACACCAAGT...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTCCCACATGCACCCACTaGTGTGCAGGAGGGATCCCT +
Preference number: 2 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVPTCTH*CAGGIP
Trigger: AGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGG...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGATTTTCAAAATCTCCATaGGGTCGTCAATACGCACCA +
Preference number: 2 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRFSKSP*GRQYAP
Trigger: TGGTGCGTATTGACGACCCCATGGAGATTTTGAAAA...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCCAGGACATCAATGAATaGACCGACAAAGCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLQDINE*TDKASP
Trigger: TGGACTTGCTTTGTCGGTCCATTCATTGATGTCCTG...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTCATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTG +
Preference number: 2 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACHQGSC*FLFFSV
Trigger: CACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATG...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGACATCCCAAAGTTCTTaGAAGTGCCTGTGGACAAGA +
Preference number: 2 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTETSQSS*KCLWTR
Trigger: TCTTGTCCACAGGCACTTTCAAGAACTTTGGGATGT...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGTTTGAGAAAGAGTGCTaGTTCATGGACTTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: DCALLGALHYSPLIHSILFEKEC*FMDFPH
Trigger: ATGGGGGAAGTCCATGAATCAGCACTCTTTCTCAAA...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCAGCTACAGAAACATCTaGCAGCATCAACAGCATACA +
Preference number: 2 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLSYRNI*QHQQHT
Trigger: TGTATGCTGTTGATGCTGTCAGATGTTTCTGTAGCT...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCGCCGTCTATCAGCCTTaGAAGGGTGAAAGTTATTTT +
Preference number: 2 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLAVYQP*KGESYF
Trigger: AAAATAACTTTCACCCTTGCAAGGCTGATAGACGGC...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTTTTTCAAAATCTCCATaGGGTCGTCAATACGCACCA +
Preference number: 2 (lower is better)
Translates to: IKDCALLGALHYSPLIHSFSKSP*GRQYAP
Trigger: TGGTGCGTATTGACGACCCCATGGAGATTTTGAAAA...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGCATCTACAGCAACAGTaGAATTACACATCATATCCT +
Preference number: 2 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWHLQQQ*NYTSYP
Trigger: AGGATATGATGTGTAATTCCACTGTTGCTGTAGATG...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAGTAGTAATGAGACTTTaGGAAAGAGTGCTGATTCAT +
Preference number: 2 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRVVMRL*ERVLIH
Trigger: ATGAATCAGCACTCTTTCTCAAAGTCTCATTACTAC...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACATCTATCACAGGGACATaGAAGCCTAAACCGGCCTTA +
Preference number: 2 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTSITGT*KPKPAL
Trigger: TAAGGCCGGTTTAGGCTTTCATGTCCCTGTGATAGA...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAGTCAAACTTCTGGGATaGCTTTCTCTTTCCCACAGG +
Preference number: 2 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTVKLLG*LSLSHR
Trigger: CCTGTGGGAAAGAGAAAGGCATCCCAGAAGTTTGAC...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTGCTCCAACTCCAGACTaGAAAAGGGTGAAACCATTA +
Preference number: 2 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFAPTPD*KRVKPL
Trigger: TAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGC...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGTTTTCAAAATCTCCATaGGGTCGTCAATACGCACCA +
Preference number: 2 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTEFSKSP*GRQYAP
Trigger: TGGTGCGTATTGACGACCCCATGGAGATTTTGAAAA...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCTGTTACTGTTGGTCATaGGTAAAGGTTTCATTTCAT +
Preference number: 2 (lower is better)
Translates to: DVTYYQGLCSARSPALQSCYCWS*VKVSFH
Trigger: ATGAAATGAAACCTTTACCCATGACCAACAGTAACA...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGTATTTTGGTCATATCTaGTCTGTTTCCTCATACTAC +
Preference number: 2 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWYFGHI*SVSSYY
Trigger: GTAGTATGAGGAAACAGACCAGATATGACCAAAATA...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTCAAAATCCTAAGCCTTaGTCTGTCCAAGATGGAGAG +
Preference number: 2 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFQNPKP*SVQDGE
Trigger: CTCTCCATCTTGGACAGACCAAGGCTTAGGATTTTG...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCAACAAGTCAAATAGCTaGTGCTTTTCCCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: QKQHALQIMECLVQFSPCNKSNS*CFSLLQ
Trigger: CTGGAGAAGGGAAAAGCATCAGCTATTTGACTTGTT...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534141.5
3UTR-3UTR TCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAGAAGGAGGGGATAAATaGCAGTTCAATCTGCTTCCA +
Preference number: 2 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTEGGDK*QFNLLP
Trigger: TGGAAGCAGATTGAACTGTCATTTATCCCCTCCTTC...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGTCAACATATCAGAACTaGGATTGTCACCATCTACAG +
Preference number: 2 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTESTYQN*DCHHLQ
Trigger: CTGTAGATGGTGACAATCTCAGTTCTGATATGTTGA...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGCCTCAGCCTTTAGTTaGAATTACAACAAGTCAAAT +
Preference number: 2 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGASAFS*NYNKSN
Trigger: ATTTGACTTGTTGTAATTTCAACTAAAGGCTGAGGC...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534141.5
3UTR-3UTR TCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAGATGGATCAGACAAATaGATTCCTTTTAAGGCACCC +
Preference number: 2 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTDGSDK*IPFKAP
Trigger: GGGTGCCTTAAAAGGAATTCATTTGTCTGATCCATC...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACATGTGGTCGAGGCCCTTaGCCTGCCATGCTTTGTAAG +
Preference number: 2 (lower is better)
Translates to: NRRFCSVKKAYPKILKETCGRGP*PAMLCK
Trigger: CTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGCATCTACAGCAACAGTaGAATTACACATCATATCCT +
Preference number: 2 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTEHLQQQ*NYTSYP
Trigger: AGGATATGATGTGTAATTCCACTGTTGCTGTAGATG...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTGATGGATCAGACAAATaGATTCCTTTTAAGGCACCC +
Preference number: 2 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLDGSDK*IPFKAP
Trigger: GGGTGCCTTAAAAGGAATTCATTTGTCTGATCCATC...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACACACCTCCATTTGAATTaGAGATTTGCAGTAACACAG +
Preference number: 2 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTHLHLN*RFAVTQ
Trigger: CTGTGTTACTGCAAATCTCCAATTCAAATGGAGGTG...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACATATAAAAATGGGTCGTaGGACTTTTCATCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTYKNGS*DFSSVA
Trigger: AGCAACAGATGAAAAGTCTCACGACCCATTTTTATA...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTGGAACACATTTTGTCTaGAGGATGAGAAGCAAATGT +
Preference number: 2 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLGTHFV*RMRSKC
Trigger: ACATTTGCTTCTCATCCTTCAGACAAAATGTGTTCC...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTCTGCAGATCATGGAGTaGCTAGTGCAATTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVLQIME*LVQFSP
Trigger: AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAG...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTAAAACAAAAGCAACATaGTCTGCAGATCATGGAGTG +
Preference number: 2 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLKTKAT*SADHGV
Trigger: CACTCCATGATCTGCAGAGCATGTTGCTTTTGTTTT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAGAGAAATGCCAGAAATaGTTTATCCACATCATGTCT +
Preference number: 2 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTEKCQK*FIHIMS
Trigger: AGACATGATGTGGATAAAGCATTTCTGGCATTTCTC...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGCACAGAGACTGTACTTaGCCTTCCCAGTTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMHRDCT*PSQFWF
Trigger: AAACCAAAACTGGGAAGGCCAAGTACAGTCTCTGTG...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTAATGATTGTTACTGTTaGTCATGGGTAAAGGTTTCA +
Preference number: 2 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFNDCYC*SWVKVS
Trigger: TGAAACCTTTACCCATGACCAACAGTAACAATCATT...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTCAAAATCCTAAGCCTTaGTCTGTCCAAGATGGAGAG +
Preference number: 2 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVQNPKP*SVQDGE
Trigger: CTCTCCATCTTGGACAGACCAAGGCTTAGGATTTTG...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAAATGATTGTTACTGTTaGTCATGGGTAAAGGTTTCA +
Preference number: 2 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTNDCYC*SWVKVS
Trigger: TGAAACCTTTACCCATGACCAACAGTAACAATCATT...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTTGGCCTGGGTTAAGATaGCTGTATTTAGTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIWPGLR*LYLVSF
Trigger: AAAGGACACTAAATACAGTCATCTTAACCCAGGCCA...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTACCTGACTCCATGACATaGGTATCATGCATTTTCACT +
Preference number: 2 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLPDSMT*VSCIFT
Trigger: AGTGAAAATGCATGATACTCATGTCATGGAGTCAGG...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTTTGGTCTGTCCAAGATaGAGAGTACCAGGAAGTAAA +
Preference number: 2 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAILVCPR*RVPGSK
Trigger: TTTACTTCCTGGTACTCTCCATCTTGGACAGACCAA...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR CAA 90 bp CCTTTCAGAAATGGAGTTCTTTTCTTTGAAGCCAGGAAAGTTTCTTaGTTTTGTCTCTTAAGGATCTACACTTGGCATCAGACCATTCAA +
Preference number: 2 (lower is better)
Translates to: PFRNGVLFFEARKVS*FCLLRIYTWHQTIQ
Trigger: TTGAATGGTCTGATGCCAAGTGTAGATCCTTAAGAGACAAAACAAAGAAACTTTCCTGGCTTCAAAGAAAAGAACTCCATTTCTGAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR TCA 90 bp CTTTCATGGCCATCCAACTTCTTCCCTAGAGCCTACATTGATAGAAAATGTTTTAGAAGAACTGAAGGTTaGCTGCATGAATTATTAGCT +
Preference number: 2 (lower is better)
Translates to: LSWPSNFFPRAYIDRKCFRRTEG*LHELLA
Trigger: AGCTAATAATTCATGCAGTCAACCTTCAGTTCTTCT...AAAACATTTTCTATCAATGTAGGCTCTAGGGAAGAAGTTGGATGGCCATGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525117.5
3UTR-3UTR CCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTACACCTCCATTTGAATTaGAGATTTGCAGTAACACAG +
Preference number: 2 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLHLHLN*RFAVTQ
Trigger: CTGTGTTACTGCAAATCTCCAATTCAAATGGAGGTG...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp CTTTCATGGCCATCCAACTTCTTCCCTAGAGCCTACATTGATAGAAAATGTTTTTCTAAACTGTCACCATaGGATAGGACCTATTTCATT +
Preference number: 2 (lower is better)
Translates to: LSWPSNFFPRAYIDRKCFSKLSP*DRTYFI
Trigger: AATGAAATAGGTCCTATCCCATGGTGACAGTTTAGA...AAAACATTTTCTATCAATGTAGGCTCTAGGGAAGAAGTTGGATGGCCATGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525117.5
3UTR-3UTR TCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTGTAGTAATGAGACTTTaGGAAAGAGTGCTGATTCAT +
Preference number: 2 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIVVMRL*ERVLIH
Trigger: ATGAATCAGCACTCTTTCTCAAAGTCTCATTACTAC...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR GCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAAAAACAAAAGCAACATaGTCTGCAGATCATGGAGTG +
Preference number: 2 (lower is better)
Translates to: NRRFCSVKKAYPKILKETKTKAT*SADHGV
Trigger: CACTCCATGATCTGCAGAGCATGTTGCTTTTGTTTT...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACACACCTCCATTTGAATTaGAGATTTGCAGTAACACAG +
Preference number: 2 (lower is better)
Translates to: NRRFCSVKKAYPKILKETHLHLN*RFAVTQ
Trigger: CTGTGTTACTGCAAATCTCCAATTCAAATGGAGGTG...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAACTACCACCCCACCTTaGCACTTAAATGTTTATTTG +
Preference number: 2 (lower is better)
Translates to: NRRFCSVKKAYPKILKETTTTPP*HLNVYL
Trigger: CAAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGT...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAGATCTGGTGGAATTATaGGCTAGCTTAAAGGGTAAT +
Preference number: 2 (lower is better)
Translates to: NRRFCSVKKAYPKILKETDLVEL*ASLKGN
Trigger: ATTACCCTTTAAGCTAGCCCATAATTCCACCAGATC...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAAACATGTCAGGACCATaGTTGAGAAAAGTAACCAGT +
Preference number: 2 (lower is better)
Translates to: NRRFCSVKKAYPKILKETNMSGP*LRKVTS
Trigger: ACTGGTTACTTTTCTCAACCATGGTCCTGACATGTT...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CCA 72 bp TATGTTCTGCTAATGCTGGCCTGTGGTCGAGGCCCTTaGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAG +
Preference number: 3 (lower is better)
Translates to: YVLLMLACGRGP*PAMLCKLRSPQ
Trigger: CTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACAGGCCAGCATTAGCAGAACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: PAMLCKLRSPQESEGQRAGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCAGTGCAATTTTCTCCTaGCTCCAACTCCAGACTGGA +
Preference number: 3 (lower is better)
Translates to: DVTYYQGLCSARSPALQSSAIFS*LQLQTG
Trigger: TCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACT...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR CCA 72 bp CCACATTCTCATGTGTTCCTGCTGATGGGCTGTGGATaGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAG +
Preference number: 3 (lower is better)
Translates to: PHSHVFLLMGCG*VSYGKAGRSNK
Trigger: CTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATCAGCAGGAACACATGAGAATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR CCA 72 bp AGTCCCACATTCTCATGTGTTCCTGCTGATGGGCTGTaGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAA +
Preference number: 3 (lower is better)
Translates to: SPTFSCVPADGL*MGKLWKGWEEQ
Trigger: TTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATCAGCAGGAACACATGAGAATGTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR CCA 72 bp AAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTaGCCTAACAACGTGCAACCAACCTCTTCCCTGAAA +
Preference number: 3 (lower is better)
Translates to: KSSIGHNGGPVS*PNNVQPTSSLK
Trigger: TTTCAGGGAAGAGGTTGGTTGCACGTTGTTAGGCCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAAGTGCAATTTTCTCCTaGCTCCAACTCCAGACTGGA +
Preference number: 3 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRSAIFS*LQLQTG
Trigger: TCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACT...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCTTGTGCTCTGACCTCTaGTCCAAAGGAGTCCAAGAA +
Preference number: 3 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLLCSDL*SKGVQE
Trigger: TTCTTGGACTCCTTTGGACAAGAGGTCAGAGCACAA...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 72 bp TCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTaGCAGAGGCTATTACCTGAGGCAGACTGTCCCATA +
Preference number: 3 (lower is better)
Translates to: SNQLDPLHIFAS*QRLLPEADCPI
Trigger: TATGGGACAGTCTGCCTCAGGTAATAGCCTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CCA 72 bp AGGTTAATAGGTCACCTGCTCCAATCTCCAACCAATTaGATCCTCTCCACATCTTTGCCTCTTGACAGAGGC +
Preference number: 3 (lower is better)
Translates to: RLIGHLLQSPTN*ILSTSLPLDRG
Trigger: GCCTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCAGGTGACCTATTAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTTACATCCCAAAGTTCTaGAAAGTGCCTGTGGACAAG +
Preference number: 3 (lower is better)
Translates to: IKDCALLGALHYSPLIHSYIPKF*KVPVDK
Trigger: CTTGTCCACAGGCACTTTCAAGAACTTTGGGATGTA...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAACACCTCCATTTGAATaGGAGATTTGCAGTAACACA +
Preference number: 3 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRTPPFE*EICSNT
Trigger: TGTGTTACTGCAAATCTCCAATTCAAATGGAGGTGT...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTACCAGCCCATCTCTCTaGGGAGTTGGTCTGTTTGTG +
Preference number: 3 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLTSPSL*GVGLFV
Trigger: CACAAACAGACCAACTCCCAAGAGAGATGGGCTGGT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTTACATCCCAAAGTTCTaGAAAGTGCCTGTGGACAAG +
Preference number: 3 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFYIPKF*KVPVDK
Trigger: CTTGTCCACAGGCACTTTCAAGAACTTTGGGATGTA...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR GCA 72 bp CAGGAAGTAAAAGATGTGACCTACTATCAAGGACTGTaGTCTGCTAGGAGCCCTGCACTACAGTCCATTAAT +
Preference number: 3 (lower is better)
Translates to: QEVKDVTYYQGL*SARSPALQSIN
Trigger: ATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATCTTTTACTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR GCA 72 bp TGGAATTGCCTATTGGGAGAGAGAGAGAGACCACCTTaGCTGAAGTTTGTAAAGAAATGGAGGGTGACAGTA +
Preference number: 3 (lower is better)
Translates to: WNCLLGERERPP*LKFVKKWRVTV
Trigger: TACTGTCACCCTCCATTTCTTTACAAACTTCAGGCAAGGTGGTCTCTCTCTCTCTCCCAATAGGCAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR GCA 72 bp TTAAGCTTCCTGATAATGAGTTTACAACCCTGGAATTaGCTATTGGGAGAGAGAGAGAGACCACCTTGCCTG +
Preference number: 3 (lower is better)
Translates to: LSFLIMSLQPWN*LLGERERPPCL
Trigger: CAGGCAAGGTGGTCTCTCTCTCTCTCCCAATAGGCAATTCCAGGGTTGTAAACTCATTATCAGGAAGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CCA 72 bp TTATGGGCTAGCTTAAAGGGTAATGTGGCAAATCATTaGCCTAATTCTGTGGGAATCACCAGTGTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: LWASLKGNVANH*PNSVGITSVLP
Trigger: TGGGAGGACACTGGTGATTCCCACAGAATTAGGCCAATGATTTGCCACATTACCCTTTAAGCTAGCCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CCA 72 bp AGAGAGAGACCACCTTGCCTGAAGTTTGTAAAGAAATaGAGGGTGACAGTAGTAATGCCCAAAGGCAAAAGG +
Preference number: 3 (lower is better)
Translates to: RERPPCLKFVKK*RVTVVMPKGKR
Trigger: CCTTTTGCCTTTGGGCATTACTACTGTCACCCTCCATTTCTTTACAAACTTCAGGCAAGGTGGTCTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGATATCAGAACTGAGATaGTCACCATCTACAGCAACA +
Preference number: 3 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTEISELR*SPSTAT
Trigger: TGTTGCTGTAGATGGTGACAATCTCAGTTCTGATAT...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTAAAAGGTGGGATGCACTaGTGGCAGAAGAACGAGGCC +
Preference number: 3 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLKGGMH*WQKNEA
Trigger: GGCCTCGTTCTTCTGCCACAAGTGCATCCCACCTTT...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 72 bp AGACCAATGAAGAGCCGTCTATCAGCCTTGCAAGGGTaGAAGTTATTTTGCAGGTGGAATAATTTGGGCCAT +
Preference number: 3 (lower is better)
Translates to: RPMKSRLSALQG*KLFCRWNNLGH
Trigger: ATGGCCCAAATTATTCCACCTGCAAAATAACTTTCACCCTTGCAAGGCTGATAGACGGCTCTTCATTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGAATGTACTAAAACGTTaGGTCTGTGAAATAGCGGAA +
Preference number: 3 (lower is better)
Translates to: DCALLGALHYSPLIHSILNVLKR*VCEIAE
Trigger: TTCCGCTATTTCACAGACCAAACGTTTTAGTACATT...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR TCA 72 bp AGCCAGACACAAAAGGCCACATGTTGTTTGACTATATaGAATGTCCAGGATAGGCAAATTCATAGGGACAGA +
Preference number: 3 (lower is better)
Translates to: SQTQKATCCLTI*NVQDRQIHRDR
Trigger: TCTGTCCCTATGAATTTGCCTATCCTGGACATTTCATATAGTCAAACAACATGTGGCCTTTTGTGTCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTAAGTGCAATTTTCTCCTaGCTCCAACTCCAGACTGGA +
Preference number: 3 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLSAIFS*LQLQTG
Trigger: TCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACT...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACATCATTTTTAGTTTTCTaGCCACTTTACTCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTSFLVF*PLYSGR
Trigger: TCTCCCTGAGTAAAGTGGCAAGAAAACTAAAAATGA...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGAAGGGTGAGGATACATaGTTCACAAGTGTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMKGEDT*FTSVFC
Trigger: ACAGAACACACTTGTGAACAATGTATCCTCACCCTT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534141.5
3UTR-3UTR CAA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTAGAAAGAGGTTTAAATaGCTCTGTGAGGTATTTCAG +
Preference number: 3 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLRKRFK*LCEVFQ
Trigger: CTGAAATACCTCACAGAGCAATTTAAACCTCTTTCT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 72 bp ATAACATTCCAACATCAAGGGACTGAGGAGAGGAGATaGAATGCCATCTCCCTTACTCTAATGTTGCTATAT +
Preference number: 3 (lower is better)
Translates to: ITFQHQGTEERR*NAISLTLMLLY
Trigger: ATATAGCAACATTAGAGTAAGGGAGATGGCATTTCATCTCCTCTCCTCAGTCCCTTGATGTTGGAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGATATCAGAACTGAGATaGTCACCATCTACAGCAACA +
Preference number: 3 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMISELR*SPSTAT
Trigger: TGTTGCTGTAGATGGTGACAATCTCAGTTCTGATAT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR TCA 72 bp CCTTTAAACAATGCAGAGGACAAGAAATCCTCTATGTaGTGGCAACTCAATTTCTACAAGACTGAAACAGTC +
Preference number: 3 (lower is better)
Translates to: PLNNAEDKKSSM*WQLNFYKTETV
Trigger: GACTGTTTCAGTCTTGTAGAAATTGAGTTGCCATCACATAGAGGATTTCTTGTCCTCTGCATTGTTTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 72 bp ATCAGCAAACTATTATTTCATAGATTTTCCCAAGCCTaGCTCCATGACATGAGTATCATGCATTTTCACTGG +
Preference number: 3 (lower is better)
Translates to: ISKLLFHRFSQA*LHDMSIMHFHW
Trigger: CCAGTGAAAATGCATGATACTCATGTCATGGAGTCAGGCTTGGGAAAATCTATGAAATAATAGTTTGCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR GCA 72 bp TATTACAAGAAGGAGGGGATAAATGACAGTTCAATCTaGTTCCACGAGCAGAATTTTTCTAAGGTTATCATC +
Preference number: 3 (lower is better)
Translates to: YYKKEGINDSSI*FHEQNFSKVII
Trigger: GATGATAACCTTAGAAAAATTCTGCTCGTGGAAGCAGATTGAACTGTCATTTATCCCCTCCTTCTTGTAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
3UTR-3UTR CAA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAGGTAGTAATGAGACTTaGAGAAAGAGTGCTGATTCA +
Preference number: 3 (lower is better)
Translates to: NRRFCSVKKAYPKILKETGSNET*RKSADS
Trigger: TGAATCAGCACTCTTTCTCAAAGTCTCATTACTACC...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 72 bp GATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTaGAAGAGACACCCATTATTTATTAAACAGAGCAAG +
Preference number: 3 (lower is better)
Translates to: DSALLKRPILKS*KRHPLFIKQSK
Trigger: CTTGCTCTGTTTAATAAATAATGGGTGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR TCA 72 bp AAAAAGAAGATAGGGATCAACCCAGTTTTCTTCCCATaGAGAATAGGAACAAGAAGAAAGAGGTTTAAATTG +
Preference number: 3 (lower is better)
Translates to: KKKIGINPVFFP*RIGTRRKRFKL
Trigger: CAATTTAAACCTCTTTCTTCTTGTTCCTATTCTTCATGGGAAGAAAACTGGGTTGATCCCTATCTTCTTTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAACCCACATGCACCCACTaGTGTGCAGGAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEPTCTH*CAGGIP
Trigger: AGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGG...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAATGGGTGTGTACAGCTaGGAGAACAGCACAACCGGC +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESMGVYS*ENSTTG
Trigger: GCCGGTTGTGCTGTTCTCTCAGCTGTACACACCCAT...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260056.6
ENST00000533486.5
CDS-3UTR TCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTCCCACATGCACCCACTaGTGTGCAGGAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFPTCTH*CAGGIP
Trigger: AGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGG...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTGCTGGAGTCAGTCCCTaGCCTGGTGCTGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFAGVSP*PGAAAT
Trigger: TGTAGCAGCAGCACCAGGGCAGGGACTGACTCCAGC...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR CCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTCTCCCCAGCATCTCATaGCCCATCAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPLPSIS*PIRAVA
Trigger: AGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAG...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCCCTGAGTCCAAGGGCTaGAGTCAGTCCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISPESKG*SQSLPW
Trigger: CCAGGGCAGGGACTGACTCCAGCCCTTGGACTCAGG...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR TCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCCCCACATGCACCCACTaGTGTGCAGGAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISPTCTH*CAGGIP
Trigger: AGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGG...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCTCCCCAGCATCTCATaGCCCATCAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHLPSIS*PIRAVA
Trigger: AGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAG...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACGGAAAAGACCCTGAGTaGATCTTCGGACGAGGCACG +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHGKDPE*IFGRGT
Trigger: CGTGCCTCGTCCGAAGATTCACTCAGGGTCTTTTCC...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCCACATGCACCCACTaGTGTGCAGGAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSPTCTH*CAGGIP
Trigger: AGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGG...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGACTGCTTTATGTCAGTaGCCCACCAGCCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRATALCQ*PTSPSL
Trigger: GAGAGATGGGCTGGTGGGTCACTGACATAAAGCAGT...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAACACAACCGGCTCCAGTaGACAGTCATATCCAATGGA +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEHNRLQ*TVISNG
Trigger: TCCATTGGATATGACTGTGCACTGGAGCCGGTTGTG...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260056.6
ENST00000533486.5
CDS-3UTR GCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGTCAAACTTCTGGGATaGCTTTCTCTTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESVKLLG*LSLSHR
Trigger: CCTGTGGGAAAGAGAAAGGCATCCCAGAAGTTTGAC...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TGTGGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTTTACACAGCTGGTTTaGGATTTTTCTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: CGRGPWPAMLCKLRSPQEFTQLV*DFSPHP
Trigger: GGGGTGGGGAGAAAAATCCCAAACCAGCTGTGTAAA...CTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527633.6
ENST00000534141.5
CDS-3UTR CCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCGGTGGGATGCACTTGTaGCAGAAGAACGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSGGMHL*QKNEAP
Trigger: TGGGGCCTCGTTCTTCTGCCACAAGTGCATCCCACC...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGCCAATGGAGCTGGTTTaGGATTTTTCTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRAPMELV*DFSPHP
Trigger: GGGGTGGGGAGAAAAATCCCAAACCAGCTCCATTGG...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533486.5
CDS-3UTR CCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCAGCAGCAGCAGGGGGTaGAGAGACCGTAGCACAATG +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSSSSRG*RDRSTM
Trigger: CATTGTGCTACGGTCTCTCCACCCCCTGCTGCTGCT...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534141.5
CDS-3UTR TCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTTCCTCAGGGGCACTGTaGTTTGATGGGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFSSGAL*FDGCVQ
Trigger: CTGTACACACCCATCAAATCACAGTGCCCCTGAGGA...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260056.6
ENST00000533486.5
CDS-3UTR TCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGAGGGGATAAATaGCAGTTCAATCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESEGGDK*QFNLLP
Trigger: TGGAAGCAGATTGAACTGTCATTTATCCCCTCCTTC...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAATCAGCCTTGCAAGGGTaGAAGTTATTTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESESALQG*KLFCRW
Trigger: CCACCTGCAAAATAACTTTCACCCTTGCAAGGCTGA...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTGAGACCGTAGCACAATaGATGCAGTGGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFETVAQ*MQWGFC
Trigger: GCAAAAGCCCCACTGCATTCATTGTGCTACGGTCTC...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534141.5
CDS-3UTR GCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTCTGAGCCAGCTTTaGCCCAAAGAGCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFSLSQL*PKEQGR
Trigger: TCTTCCCTGCTCTTTGGGGCAAAGCTGGCTCAGAGA...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260056.6
CDS-3UTR GCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGGCTGCTAAGTCCAACTaGGGTTCAGGCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGAAKSN*GSGLPA
Trigger: GGCTGGCAGGCCTGAACCGCAGTTGGACTTAGCAGC...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260056.6
CDS-3UTR GCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAAGGAGGAGGAGTGATTaGAAATGGTATGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESRRRSD*KWYGVS
Trigger: AGAAACCCCATACCATTTGCAATCACTCCTCCTCCT...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGATTAGTGGTTGCCGGATaGTGGGGGAAGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRLVVAG*WGKEEE
Trigger: CTCCTCCTCCTTCCCCCAGCATCCGGCAACCACTAA...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGTGTGGCTCCTTGACCTaGGGGGAAAAGACCCTGAGT +
Preference number: 4 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWCGSLT*GEKTLS
Trigger: ACTCAGGGTCTTTTCCCCCCAGGTCAAGGAGCCACA...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCTCCCCAGCATCTCATaGCCCATCAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLLPSIS*PIRAVA
Trigger: AGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAG...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCTGTGGTCGAGGCCCTTaGCCTGCCATGCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISCGRGP*PAMLCK
Trigger: CTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCATGTCCTGAGCTTCTaGGAATTCTTCAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFHVLSF*EFFSSL
Trigger: CAGCGAGCTGAAGAATTCTCAGAAGCTCAGGACATG...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTCATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFHQGSC*FLFFSV
Trigger: CACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATG...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHHQGSC*FLFFSV
Trigger: CACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATG...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TGTGGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGCAGACTGGAAAAGGGTaGAACCATTATATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CGRGPWPAMLCKLRSPQEQTGKG*NHYMFC
Trigger: GCAGAACATATAATGGTTTCACCCTTTTCCAGTCTG...CTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAATTTGAGAAAGAGTGCTaGTTCATGGACTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEFEKEC*FMDFPH
Trigger: ATGGGGGAAGTCCATGAATCAGCACTCTTTCTCAAA...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCATCAGGAAAAACACAGTaGGGCCAACCAAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESSGKTQ*GQPKVS
Trigger: TGATACTTTTGGTTGGCCTCACTGTGTTTTTCCTGA...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TGTGGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTTTTTAATCCCCTTCTaGGTCTGGCCAAGGGTATAT +
Preference number: 4 (lower is better)
Translates to: CGRGPWPAMLCKLRSPQEFLIPF*VWPRVY
Trigger: ATATACCCTTGGCCAGACTCAGAAGGGGATTAAAAA...CTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCACTGCTTTATGTCAGTaGCCCACCAGCCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISTALCQ*PTSPSL
Trigger: GAGAGATGGGCTGGTGGGTCACTGACATAAAGCAGT...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACAAGGAGGAGGAGGAGTaGTTGCAAATGGTATGGGGT +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHKEEEE*LQMVWG
Trigger: ACCCCATACCATTTGCAATCACTCCTCCTCCTCCTT...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTCTCGGGCCGTGTGTaGCAGGACTGCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGLSGRV*QDCSPP
Trigger: TGGGGGACTGCAGTCCTGTCACACACGGCCCGAGAG...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612684.4
CDS-3UTR GCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTATGCACCCACTGATGTaGAGGAGGGATCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSMHPLM*RRDPYS
Trigger: ACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCAT...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGCTGGAGTCAGTCCCTaGCCTGGTGCTGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGAGVSP*PGAAAT
Trigger: TGTAGCAGCAGCACCAGGGCAGGGACTGACTCCAGC...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR CCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTTGTGGCTCCTTGACCTaGGGGGAAAAGACCCTGAGT +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSCGSLT*GEKTLS
Trigger: ACTCAGGGTCTTTTCCCCCCAGGTCAAGGAGCCACA...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTTCTTCAGCTCGCTGCTaGGAAACCTCTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFSSARC*ETSLLS
Trigger: TGAAAGGAGAGAGGTTTCCCAGCAGCGAGCTGAAGA...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGCCTGAGTCCAAGGGCTaGAGTCAGTCCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSPESKG*SQSLPW
Trigger: CCAGGGCAGGGACTGACTCCAGCCCTTGGACTCAGG...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR CCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCATTTTCAAAATCTCCATaGGGTCGTCAATACGCACCA +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESFSKSP*GRQYAP
Trigger: TGGTGCGTATTGACGACCCCATGGAGATTTTGAAAA...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TGTGGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTTGGTCTGTCCAAGATaGAGAGTACCAGGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: CGRGPWPAMLCKLRSPQELVCPR*RVPGSK
Trigger: TTTACTTCCTGGTACTCTCCATCTTGGACAGACCAA...CTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTGGGTCATCATGTGCTaGGGACACTGGATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFWVIMC*GHWIFA
Trigger: GGCAAAAATCCAGTGTCCCCAGCACATGATGACCCA...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGGGTGGGATGCACTTGTaGCAGAAGAACGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGGGMHL*QKNEAP
Trigger: TGGGGCCTCGTTCTTCTGCCACAAGTGCATCCCACC...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAACAGGACATCAATGAATaGACCGACAAAGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEQDINE*TDKASP
Trigger: TGGACTTGCTTTGTCGGTCCATTCATTGATGTCCTG...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGGGAAAAGACCCTGAGTaGATCTTCGGACGAGGCACG +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGGKDPE*IFGRGT
Trigger: CGTGCCTCGTCCGAAGATTCACTCAGGGTCTTTTCC...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCCATGTCCTGAGCTTCTaGGAATTCTTCAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISHVLSF*EFFSSL
Trigger: CAGCGAGCTGAAGAATTCTCAGAAGCTCAGGACATG...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTCATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSHQGSC*FLFFSV
Trigger: CACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATG...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCCCTTCTCCAGGTAAGGGTGAGGATACATTGTTCACAAGTGTGTTCTGTCTGGAGGTCTGCGATGTCCTaGGTCCAAGGGCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SLLQVRVRIHCSQVCSVWRSAMS*VQGLES
Trigger: TGACTCCAGCCCTTGGACTCAGGACATCGCAGACCT...CCAGACAGAACACACTTGTGAACAATGTATCCTCACCCTTACCTGGAGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534141.5
CDS-3UTR TCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCAAATGGATGTGCGAATaGGTCACGCACGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSKWMCE*VTHARE
Trigger: TTCCCTTGCGTGCGTGACTCATTCGCACATCCATTT...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR TCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCATCAACATATCAGAACTaGGATTGTCACCATCTACAG +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESSTYQN*DCHHLQ
Trigger: CTGTAGATGGTGACAATCTCAGTTCTGATATGTTGA...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGCCAAGCCTGACTCCATaGCATGAGTATCATGCATTT +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRAPSLTP*HEYHAF
Trigger: AAATGCATGATACTCATGTCATGGAGTCAGGCTTGG...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTAGATTTTCCCAAGCCTaGCTCCATGACATGAGTATC +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPRFSQA*LHDMSI
Trigger: GATACTCATGTCATGGAGTCAGGCTTGGGAAAATCT...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTCAACAGGACATCAATaGATGGACCGACAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPSTGHQ*MDRQSK
Trigger: CTTGCTTTGTCGGTCCATTCATTGATGTCCTGTTGA...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACTCAGCCTTGCAAGGGTaGAAGTTATTTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHSALQG*KLFCRW
Trigger: CCACCTGCAAAATAACTTTCACCCTTGCAAGGCTGA...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTEALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGCCCTTGGCCTGCCATaGTTTGTAAGCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGALGLP*FVSSGA
Trigger: GGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGC...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TGTGGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGAAAACAAAAGCAACATaGTCTGCAGATCATGGAGTG +
Preference number: 4 (lower is better)
Translates to: CGRGPWPAMLCKLRSPQEKTKAT*SADHGV
Trigger: CACTCCATGATCTGCAGAGCATGTTGCTTTTGTTTT...CTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTATGCACCCACTGATGTaGAGGAGGGATCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSMHPLM*RRDPYS
Trigger: ACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCAT...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCATGCACCCACTGATGTaGAGGAGGGATCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLMHPLM*RRDPYS
Trigger: ACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCAT...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAATAGATCTTGTGGACTaGTTTATGTCAGTGACCCAC +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEIDLVD*FMSVTH
Trigger: GTGGGTCACTGACATAAAGCAGTCCACAAGATCTAT...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAACTAAGATCGTAAGTTaGACTCTCCAAACAGGATTG +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESTKIVS*TLQTGL
Trigger: CAATCCTGTTTGGAGAGTGCAACTTACGATCTTAGT...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGTCTTCAGCTCGCTGCTaGGAAACCTCTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWSSARC*ETSLLS
Trigger: TGAAAGGAGAGAGGTTTCCCAGCAGCGAGCTGAAGA...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCACATTATCAGATTCCTTaGCTGAGGTCTCCAGATAAT +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESHYQIP*LRSPDN
Trigger: ATTATCTGGAGACCTCAGCCAAGGAATCTGATAATG...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCTGTGGTCGAGGCCCTTaGCCTGCCATGCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSCGRGP*PAMLCK
Trigger: CTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGTGTGGTCGAGGCCCTTaGCCTGCCATGCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVCGRGP*PAMLCK
Trigger: CTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAACTCATTTACACAGCTaGTTTGGGATTTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESETHLHS*FGIFLP
Trigger: GGGGAGAAAAATCCCAAACCAGCTGTGTAAATGAGT...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527633.6
ENST00000534141.5
CDS-3UTR CCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGCACAGAGACTGTACTTaGCCTTCCCAGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRAHRDCT*PSQFWF
Trigger: AAACCAAAACTGGGAAGGCCAAGTACAGTCTCTGTG...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAAACAAGTCAAACTTCTaGGATGCCTTTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESENKSNF*DAFLFP
Trigger: GGGAAAGAGAAAGGCATCCCAGAAGTTTGACTTGTT...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTACTTGGTGTGGGATCTaGTGGAATTATGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFTWCGI*WNYGLA
Trigger: AGCTAGCCCATAATTCCACCAGATCCCACACCAAGT...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTATGGTCGCCCTGACATaGAACCCAAATCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLMVALT*NPNLCP
Trigger: GGGACACAGATTTGGGTTCCATGTCAGGGCGACCAT...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTGACTCGGGTCATCAGTaGGTTATATTTCTAACAGGC +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPDSGHQ*VIFLTG
Trigger: GCCTGTTAGAAATATAACCCACTGATGACCCGAGTC...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCACACAGTCATATCCAATaGAGCTGGTTTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESHSHIQ*SWFGIF
Trigger: AAAAATCCCAAACCAGCTCCATTGGATATGACTGTG...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533486.5
CDS-3UTR TCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTATGGGTGTGTACAGCTaGGAGAACAGCACAACCGGC +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGMGVYS*ENSTTG
Trigger: GCCGGTTGTGCTGTTCTCTCAGCTGTACACACCCAT...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260056.6
ENST00000533486.5
CDS-3UTR TCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGGGAAAAGACCCTGAGTaGATCTTCGGACGAGGCACG +
Preference number: 4 (lower is better)
Translates to: DCALLGALHYSPLIHSILGKDPE*IFGRGT
Trigger: CGTGCCTCGTCCGAAGATTCACTCAGGGTCTTTTCC...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGACATGTCCTGAGCTTCTaGGAATTCTTCAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRHVLSF*EFFSSL
Trigger: CAGCGAGCTGAAGAATTCTCAGAAGCTCAGGACATG...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTAACAAGTCAAATAGCTaGTGCTTTTCCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPNKSNS*CFSLLQ
Trigger: CTGGAGAAGGGAAAAGCATCAGCTATTTGACTTGTT...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGCCTCAGCCTTTAGTTaGAATTACAACAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESASAFS*NYNKSN
Trigger: ATTTGACTTGTTGTAATTTCAACTAAAGGCTGAGGC...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACACATCCCAAAGTTCTTaGAAGTGCCTGTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHTSQSS*KCLWTR
Trigger: TCTTGTCCACAGGCACTTTCAAGAACTTTGGGATGT...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTACATCCCAAAGTTCTTaGAAGTGCCTGTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFTSQSS*KCLWTR
Trigger: TCTTGTCCACAGGCACTTTCAAGAACTTTGGGATGT...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCATATAAAAATGGGTCGTaGGACTTTTCATCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESYKNGS*DFSSVA
Trigger: AGCAACAGATGAAAAGTCTCACGACCCATTTTTATA...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGTGGCCTGGGTTAAGATaGCTGTATTTAGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRAWPGLR*LYLVSF
Trigger: AAAGGACACTAAATACAGTCATCTTAACCCAGGCCA...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTAGATTTTCCCAAGCCTaGCTCCATGACATGAGTATC +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFRFSQA*LHDMSI
Trigger: GATACTCATGTCATGGAGTCAGGCTTGGGAAAATCT...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAAGGCTAATAGAGCAATaGTCCCTAAGTACTCATTAC +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESERLIEQ*SLSTHY
Trigger: GTAATGAGTACTTAGGGATCATTGCTCTATTAGCCT...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCACTGAGGAGAGGAGATaGAATGCCATCTCCCTTACT +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSTEERR*NAISLT
Trigger: AGTAAGGGAGATGGCATTTCATCTCCTCTCCTCAGT...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TGTGGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTTAGAAGCCAGCATTTaGAATTTTCTATCACAGGGA +
Preference number: 4 (lower is better)
Translates to: CGRGPWPAMLCKLRSPQELEASI*NFLSQG
Trigger: TCCCTGTGATAGAAAATTTCAAATGCTGGCTTCTAA...CTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAAAACATAGGCTACAATaGATGGACAGTCATATGGTT +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESKHRLQ*MDSHMV
Trigger: AACCATATGACTGTCCATTCATTGTAGCCTATGTTT...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGACACAACCGGCTCCAGTaGACAGTCATATCCAATGGA +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRHNRLQ*TVISNG
Trigger: TCCATTGGATATGACTGTGCACTGGAGCCGGTTGTG...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533486.5
CDS-3UTR GCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGATACTATCAAGGACTGTaGTCTGCTAGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRYYQGL*SARSPA
Trigger: TGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTA...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGGCCGTCTATCAGCCTTaGAAGGGTGAAAGTTATTTT +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRAAVYQP*KGESYF
Trigger: AAAATAACTTTCACCCTTGCAAGGCTGATAGACGGC...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTGCTTTTATCTTCCAGTaGTCCAGCTCCCCATTCACT +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSAFIFQ*SSSPFT
Trigger: AGTGAATGGGGAGCTGGAGCACTGGAAGATAAAAGC...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000533014.5
CDS-3UTR CCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCAAACCAGAAAACCCCTaGCTGCTAAGTCCAACTGCG +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLKPENP*LLSPTA
Trigger: CGCAGTTGGACTTAGCAGCCAGGGGTTTTCTGGTTT...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000260056.6
CDS-3UTR CCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTCACAGTCATATCCAATaGAGCTATCCCAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPHSHIQ*SYPKRQ
Trigger: CTGTCTTTTGGGATAGCTCCATTGGATATGACTGTG...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260056.6
CDS-3UTR CCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCTCTTCAGCTCGCTGCTaGGAAACCTCTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLSSARC*ETSLLS
Trigger: TGAAAGGAGAGAGGTTTCCCAGCAGCGAGCTGAAGA...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGATCTTCAGCTCGCTGCTaGGAAACCTCTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRSSARC*ETSLLS
Trigger: TGAAAGGAGAGAGGTTTCCCAGCAGCGAGCTGAAGA...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGCTCCCCAGCATCTCATaGCCCATCAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSLPSIS*PIRAVA
Trigger: AGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAG...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAATGTGGTCGAGGCCCTTaGCCTGCCATGCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: ECLVQFSPCSNSRLEKGECGRGP*PAMLCK
Trigger: CTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA...TTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCACAGAGACTGTACTTaGCCTTCCCAGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFHRDCT*PSQFWF
Trigger: AAACCAAAACTGGGAAGGCCAAGTACAGTCTCTGTG...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCAAAATCCTAAGCCTTaGTCTGTCCAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHQNPKP*SVQDGE
Trigger: CTCTCCATCTTGGACAGACCAAGGCTTAGGATTTTG...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGTGGATGGGTAAGTTATaGAAAGGCTGGGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWWMGKL*KGWEEQ
Trigger: TTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCA...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCTGGATGGGTAAGTTATaGAAAGGCTGGGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISWMGKL*KGWEEQ
Trigger: TTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCA...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGCTGATGGGCTGTGGATaGGTAAGTTATGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWLMGCG*VSYGKA
Trigger: AGCCTTTCCATAACTTACCCATCCACAGCCCATCAG...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAACTACCACCCCACCTTaGCACTTAAATGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESETTTPP*HLNVYL
Trigger: CAAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGT...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCATGGTCGCCCTGACATaGAACCCAAATCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSMVALT*NPNLCP
Trigger: GGGACACAGATTTGGGTTCCATGTCAGGGCGACCAT...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCAGGACATCAATGAATaGACCGACAAAGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFQDINE*TDKASP
Trigger: TGGACTTGCTTTGTCGGTCCATTCATTGATGTCCTG...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACGCAGGTGGAATAATTTaGGCCATAGGCTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHAGGII*AIGFNS
Trigger: GCTATTGAAGCCTATGGCCCAAATTATTCCACCTGC...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGGGAAGAAACGCTTTTaGATGTTGGTAATTATGTAC +
Preference number: 4 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESGKKRF*MLVIMY
Trigger: GTACATAATTACCAACATCCAAAAGCGTTTCTTCCC...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTAACAAGTCAAATAGCTaGTGCTTTTCCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFNKSNS*CFSLLQ
Trigger: CTGGAGAAGGGAAAAGCATCAGCTATTTGACTTGTT...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCGAAGGAGGGGATAAATaGCAGTTCAATCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSEGGDK*QFNLLP
Trigger: TGGAAGCAGATTGAACTGTCATTTATCCCCTCCTTC...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCACACACTTGCAACTGTaGGACAAAGTTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSTHLQL*DKVGSS
Trigger: TGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGT...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCACAGAGGCTATTACCTaGGGCAGACTGTCCCATAGT +
Preference number: 4 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLTEAIT*GRLSHS
Trigger: ACTATGGGACAGTCTGCCTCAGGTAATAGCCTCTGT...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTGATGGATCAGACAAATaGATTCCTTTTAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFDGSDK*IPFKAP
Trigger: GGGTGCCTTAAAAGGAATTCATTTGTCTGATCCATC...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTTCTATCACAGGGACATaGAAGCCTAAACCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSSITGT*KPKPAL
Trigger: TAAGGCCGGTTTAGGCTTTCATGTCCCTGTGATAGA...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTACGCAAGGGAAGGTCTaGGATGTCCTGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFTQGKV*DVLSPR
Trigger: CCTTGGACTCAGGACATCGCAGACCTTCCCTTGCGT...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR GCA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAAATGACAGTTCAATCTaGTTCCACGAGCAGAATTTT +
Preference number: 4 (lower is better)
Translates to: RGPWPAMLCKLRSPQESENDSSI*FHEQNF
Trigger: AAAATTCTGCTCGTGGAAGCAGATTGAACTGTCATT...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGTTACAACCCTGGAATTaGCTATTGGGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWLQPWN*LLGERE
Trigger: CTCTCTCTCTCCCAATAGGCAATTCCAGGGTTGTAA...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTCAAAACCGAGATTCATaGCTCCATTTTTACCAAGGG +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFQNRDS*LHFYQG
Trigger: CCCTTGGTAAAAATGGAGGCATGAATCTCGGTTTTG...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTTTAGTGGTTGCCGGATaGTGGGGGAAGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSALVVAG*WGKEEE
Trigger: CTCCTCCTCCTTCCCCCAGCATCCGGCAACCACTAA...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGCTCTCCAAACAGGATTaGAAGAGGTTCTACGTAAAT +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRALSKQD*KRFYVN
Trigger: ATTTACGTAGAACCTCTTGCAATCCTGTTTGGAGAG...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCAGCTCCCCATTCACTaGTGTATTTGGTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLQLPIH*CIWCGC
Trigger: ACATCCACACCAAATACAGCAGTGAATGGGGAGCTG...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533014.5
CDS-3UTR GCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCCAGATCTGTAGCCTaGTTTTATCTTCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSPRSVA*FYLPVL
Trigger: GAGCACTGGAAGATAAAAGCAGGCTACAGATCTGGG...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533014.5
CDS-3UTR CCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTCATTATCAGATTCCTTaGCTGAGGTCTCCAGATAAT +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPHYQIP*LRSPDN
Trigger: ATTATCTGGAGACCTCAGCCAAGGAATCTGATAATG...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTCCCCAGCATCTCATaGCCCATCAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGLPSIS*PIRAVA
Trigger: AGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAG...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTCACCTCCATTTGAATTaGAGATTTGCAGTAACACAG +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPHLHLN*RFAVTQ
Trigger: CTGTGTTACTGCAAATCTCCAATTCAAATGGAGGTG...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGCACCTCCATTTGAATTaGAGATTTGCAGTAACACAG +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRAHLHLN*RFAVTQ
Trigger: CTGTGTTACTGCAAATCTCCAATTCAAATGGAGGTG...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTTGGATGGGTAAGTTATaGAAAGGCTGGGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSWMGKL*KGWEEQ
Trigger: TTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCA...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCGGAGGGCCAGTCTCTTaGCCTAACAACGTGCAACCA +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLGGPVS*PNNVQP
Trigger: TGGTTGCACGTTGTTAGGCCAAGAGACTGGCCCTCC...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACGTCTCAGCTAATTTGTaGCATACTAGAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHVSANL*HTRTPH
Trigger: GTGAGGAGTTCTAGTATGCCACAAATTAGCTGAGAC...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTGGAGCTCCAACCATCTaGTATGTCTGGAAGACACTT +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLGAPTI*YVWKTL
Trigger: AAGTGTCTTCCAGACATACCAGATGGTTGGAGCTCC...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCTCCTCAGGGGCACTGTaGTTTGATGGGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLSSGAL*FDGCVQ
Trigger: CTGTACACACCCATCAAATCACAGTGCCCCTGAGGA...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260056.6
ENST00000533486.5
CDS-3UTR TCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCCAGACTGGAAAAGGGTaGAACCATTATATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISQTGKG*NHYMFC
Trigger: GCAGAACATATAATGGTTTCACCCTTTTCCAGTCTG...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTCAGACTGGAAAAGGGTaGAACCATTATATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSQTGKG*NHYMFC
Trigger: GCAGAACATATAATGGTTTCACCCTTTTCCAGTCTG...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAGAAGGAGGGGATAAATaGCAGTTCAATCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGREGGDK*QFNLLP
Trigger: TGGAAGCAGATTGAACTGTCATTTATCCCCTCCTTC...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTGAAGGAGGGGATAAATaGCAGTTCAATCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLEGGDK*QFNLLP
Trigger: TGGAAGCAGATTGAACTGTCATTTATCCCCTCCTTC...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTTCAACATATCAGAACTaGGATTGTCACCATCTACAG +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFSTYQN*DCHHLQ
Trigger: CTGTAGATGGTGACAATCTCAGTTCTGATATGTTGA...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTCCTGACTCCATGACATaGGTATCATGCATTTTCACT +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSPDSMT*VSCIFT
Trigger: AGTGAAAATGCATGATACTCATGTCATGGAGTCAGG...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGACCAAGCCTGACTCCATaGCATGAGTATCATGCATTT +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRPSLTP*HEYHAF
Trigger: AAATGCATGATACTCATGTCATGGAGTCAGGCTTGG...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGACTGAGGAGAGGAGATaGAATGCCATCTCCCTTACT +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVTEERR*NAISLT
Trigger: AGTAAGGGAGATGGCATTTCATCTCCTCTCCTCAGT...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTACAGAGGCTATTACCTaGGGCAGACTGTCCCATAGT +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGTEAIT*GRLSHS
Trigger: ACTATGGGACAGTCTGCCTCAGGTAATAGCCTCTGT...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTCAGCCTTGCAAGGGTaGAAGTTATTTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGSALQG*KLFCRW
Trigger: CCACCTGCAAAATAACTTTCACCCTTGCAAGGCTGA...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGGATGGATCAGACAAATaGATTCCTTTTAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWDGSDK*IPFKAP
Trigger: GGGTGCCTTAAAAGGAATTCATTTGTCTGATCCATC...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCTCTATCACAGGGACATaGAAGCCTAAACCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSSITGT*KPKPAL
Trigger: TAAGGCCGGTTTAGGCTTTCATGTCCCTGTGATAGA...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGCAGAGGTCTCCTAATTaGTCAATTAAACTAAGATCG +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRAQRSPN*SIKLRS
Trigger: CGATCTTAGTTTAATTGATCAATTAGGAGACCTCTG...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTGTGCAATTTTCTCCTTaGTCCAACTCCAGACTGGAA +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLVQFSP*SNSRLE
Trigger: TTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCAC...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCTGCAGATCATGGAGTaGCTAGTGCAATTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSLQIME*LVQFSP
Trigger: AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAG...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCTGCAGATCATGGAGTaGCTAGTGCAATTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLLQIME*LVQFSP
Trigger: AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAG...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTAAAACAAAAGCAACATaGTCTGCAGATCATGGAGTG +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFKTKAT*SADHGV
Trigger: CACTCCATGATCTGCAGAGCATGTTGCTTTTGTTTT...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTGAGAAATGCCAGAAATaGTTTATCCACATCATGTCT +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPEKCQK*FIHIMS
Trigger: AGACATGATGTGGATAAAGCATTTCTGGCATTTCTC...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTGTCAAACTTCTGGGATaGCTTTCTCTTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: IKDCALLGALHYSPLIHSVKLLG*LSLSHR
Trigger: CCTGTGGGAAAGAGAAAGGCATCCCAGAAGTTTGAC...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGGTCAAACTTCTGGGATaGCTTTCTCTTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGVKLLG*LSLSHR
Trigger: CCTGTGGGAAAGAGAAAGGCATCCCAGAAGTTTGAC...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCGGAGAGGAGATGAAATaGCATCTCCCTTACTCTAAT +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISGEEMK*HLPYSN
Trigger: ATTAGAGTAAGGGAGATGGCATTTCATCTCCTCTCC...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTTTACAACCCTGGAATTaGCTATTGGGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSLQPWN*LLGERE
Trigger: CTCTCTCTCTCCCAATAGGCAATTCCAGGGTTGTAA...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATTTAGTGGTTGCCGGATaGTGGGGGAAGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANLVVAG*WGKEEE
Trigger: CTCCTCCTCCTTCCCCCAGCATCCGGCAACCACTAA...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGGCAGTCCCCCACCTCTaGCTTCCTCAGATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSAVPHL*LPQIFQ
Trigger: TTGGAAAATCTGAGGAAGGCAGAGGTGGGGGACTGC...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612684.4
CDS-3UTR CCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGTCTTCAGCTCGCTGCTaGGAAACCTCTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTESSARC*ETSLLS
Trigger: TGAAAGGAGAGAGGTTTCCCAGCAGCGAGCTGAAGA...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCGCTCCAACTCCAGACTaGAAAAGGGTGAAACCATTA +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLAPTPD*KRVKPL
Trigger: TAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGC...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTGCTCCAACTCCAGACTaGAAAAGGGTGAAACCATTA +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSAPTPD*KRVKPL
Trigger: TAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGC...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCACAGAGACTGTACTTaGCCTTCCCAGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSHRDCT*PSQFWF
Trigger: AAACCAAAACTGGGAAGGCCAAGTACAGTCTCTGTG...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTAACAAGTCAAACTTCTaGGATGCCTTTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSNKSNF*DAFLFP
Trigger: GGGAAAGAGAAAGGCATCCCAGAAGTTTGACTTGTT...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTTGGGTCATCATGTGCTaGGGACACTGGATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGWVIMC*GHWIFA
Trigger: GGCAAAAATCCAGTGTCCCCAGCACATGATGACCCA...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAGGAGGGCCAGTCTCTTaGCCTAACAACGTGCAACCA +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTGGPVS*PNNVQP
Trigger: TGGTTGCACGTTGTTAGGCCAAGAGACTGGCCCTCC...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGACAGGACATCAATGAATaGACCGACAAAGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRQDINE*TDKASP
Trigger: TGGACTTGCTTTGTCGGTCCATTCATTGATGTCCTG...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTATCTCTCTTGGGAGTTaGTCTGTTTGTGAGAACTTT +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFISLGS*SVCENF
Trigger: AAAGTTCTCACAAACAGACCAACTCCCAAGAGAGAT...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACTGTGTACAAGATATATaGGGCACACTTTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHCVQDI*GTLFPS
Trigger: TGAAGGGAAAAGTGTGCCCCATATATCTTGTACACA...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CAA 72 bp CTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTaGCCTCTTGACAGAGGCTATTACCTGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LQSPTNWILSTS*PLDRGYYLRQT
Trigger: AGTCTGCCTCAGGTAATAGCCTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGGAAAAGACCCTGAGTaGATCTTCGGACGAGGCACG +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANGKDPE*IFGRGT
Trigger: CGTGCCTCGTCCGAAGATTCACTCAGGGTCTTTTCC...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTGGAAAAGACCCTGAGTaGATCTTCGGACGAGGCACG +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLGKDPE*IFGRGT
Trigger: CGTGCCTCGTCCGAAGATTCACTCAGGGTCTTTTCC...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTAACAAGTCAAATAGCTaGTGCTTTTCCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSNKSNS*CFSLLQ
Trigger: CTGGAGAAGGGAAAAGCATCAGCTATTTGACTTGTT...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCCCACATGCACCCACTaGTGTGCAGGAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVPTCTH*CAGGIP
Trigger: AGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGG...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCAAATGGATGTGCGAATaGGTCACGCACGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLKWMCE*VTHARE
Trigger: TTCCCTTGCGTGCGTGACTCATTCGCACATCCATTT...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR TCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCACACACTTGCAACTGTaGGACAAAGTTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSTHLQL*DKVGSS
Trigger: TGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGT...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGACACACTTGCAACTGTaGGACAAAGTTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGTHLQL*DKVGSS
Trigger: TGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGT...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCTTTTTAATCCCCTTCTaGGTCTGGCCAAGGGTATAT +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLFLIPF*VWPRVY
Trigger: ATATACCCTTGGCCAGACTCAGAAGGGGATTAAAAA...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTAGATTTTCCCAAGCCTaGCTCCATGACATGAGTATC +
Preference number: 4 (lower is better)
Translates to: IKDCALLGALHYSPLIHSRFSQA*LHDMSI
Trigger: GATACTCATGTCATGGAGTCAGGCTTGGGAAAATCT...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCATTCAGTATGAGTCATaGACTGAAACTTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLIQYES*TETWCG
Trigger: CCCACACCAAGTTTCAGTTCATGACTCATACTGAAT...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTATTCAGTATGAGTCATaGACTGAAACTTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLIQYES*TETWCG
Trigger: CCCACACCAAGTTTCAGTTCATGACTCATACTGAAT...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCGGAACACATTTTGTCTaGAGGATGAGAAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSGTHFV*RMRSKC
Trigger: ACATTTGCTTCTCATCCTTCAGACAAAATGTGTTCC...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAACTGCTTTATGTCAGTaGCCCACCAGCCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTTALCQ*PTSPSL
Trigger: GAGAGATGGGCTGGTGGGTCACTGACATAAAGCAGT...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCTCAACAGTAAGACCGTaGTCTACATCTGATACCAAT +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISSTVRP*STSDTN
Trigger: ATTGGTATCAGATGTAGATCACGGTCTTACTGTTGA...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAAGGCCACATGTTGTTTaGCTATATGAAATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRRPHVV*LYEMSR
Trigger: CCTGGACATTTCATATAGTCAAACAACATGTGGCCT...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTAAACATAGGCTACAATaGATGGACAGTCATATGGTT +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFKHRLQ*MDSHMV
Trigger: AACCATATGACTGTCCATTCATTGTAGCCTATGTTT...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGCTGCAGATCATGGAGTaGCTAGTGCAATTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGLQIME*LVQFSP
Trigger: AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAG...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTATGCACCCACTGATGTaGAGGAGGGATCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACMHPLM*RRDPYS
Trigger: ACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCAT...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTATGCACCCACTGATGTaGAGGAGGGATCCCTACAGT +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSAMHPLM*RRDPYS
Trigger: ACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCAT...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTGCTGGAGTCAGTCCCTaGCCTGGTGCTGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVAGVSP*PGAAAT
Trigger: TGTAGCAGCAGCACCAGGGCAGGGACTGACTCCAGC...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR GCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTACGCAAGGGAAGGTCTaGGATGTCCTGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLTQGKV*DVLSPR
Trigger: CCTTGGACTCAGGACATCGCAGACCTTCCCTTGCGT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527633.6
ENST00000533486.5
CDS-3UTR GCA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTTACTATCAAGGACTGTaGTCTGCTAGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFYYQGL*SARSPA
Trigger: TGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTA...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCTACTATCAAGGACTGTaGTCTGCTAGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLYYQGL*SARSPA
Trigger: TGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTA...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTAATGACAGTTCAATCTaGTTCCACGAGCAGAATTTT +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFNDSSI*FHEQNF
Trigger: AAAATTCTGCTCGTGGAAGCAGATTGAACTGTCATT...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTATGCATAATCTCATGTaGAAGACACTGGTCAATCTA +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFMHNLM*KTLVNL
Trigger: TAGATTGACCAGTGTCTTGCACATGAGATTATGCAT...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCAGAGAGAGACCACCTTaGCTGAAGTTTGTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISRERPP*LKFVKK
Trigger: TTTCTTTACAAACTTCAGGCAAGGTGGTCTCTCTCT...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTTACAACCCTGGAATTaGCTATTGGGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGLQPWN*LLGERE
Trigger: CTCTCTCTCTCCCAATAGGCAATTCCAGGGTTGTAA...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTAGGAGGAGGAGTGATTaGAAATGGTATGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: IKDCALLGALHYSPLIHSRRRSD*KWYGVS
Trigger: AGAAACCCCATACCATTTGCAATCACTCCTCCTCCT...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGCATTATCAGATTCCTTaGCTGAGGTCTCCAGATAAT +
Preference number: 4 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWHYQIP*LRSPDN
Trigger: ATTATCTGGAGACCTCAGCCAAGGAATCTGATAATG...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTCATTATCAGATTCCTTaGCTGAGGTCTCCAGATAAT +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSHYQIP*LRSPDN
Trigger: ATTATCTGGAGACCTCAGCCAAGGAATCTGATAATG...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTACCTGAGTCCAAGGGCTaGAGTCAGTCCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLPESKG*SQSLPW
Trigger: CCAGGGCAGGGACTGACTCCAGCCCTTGGACTCAGG...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527633.6
ENST00000533486.5
CDS-3UTR CCA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGTGTTACTGTTGGTCATaGGTAAAGGTTTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: PAMLCKLRSPQESEGQRACYCWS*VKVSFH
Trigger: ATGAAATGAAACCTTTACCCATGACCAACAGTAACA...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTGTTACTGTTGGTCATaGGTAAAGGTTTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: HRQISPASHGPSGQLLIPCYCWS*VKVSFH
Trigger: ATGAAATGAAACCTTTACCCATGACCAACAGTAACA...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCATCTACAGCAACAGTaGAATTACACATCATATCCT +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHHLQQQ*NYTSYP
Trigger: AGGATATGATGTGTAATTCCACTGTTGCTGTAGATG...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTTGGGTCATCATGTGCTaGGGACACTGGATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFWVIMC*GHWIFA
Trigger: GGCAAAAATCCAGTGTCCCCAGCACATGATGACCCA...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTCTGATGGGCTGTGGATaGGTAAGTTATGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGLMGCG*VSYGKA
Trigger: AGCCTTTCCATAACTTACCCATCCACAGCCCATCAG...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACAGAAAAAGCCTTCTATaGGCAAAGAAGCACAAAATC +
Preference number: 4 (lower is better)
Translates to: QGPQMITTEALKKSSHMHRKSLL*AKKHKI
Trigger: GATTTTGTGCTTCTTTGCCCATAGAAGGCTTTTTCT...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTAGAAAAAGCCTTCTATaGGCAAAGAAGCACAAAATC +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFRKSLL*AKKHKI
Trigger: GATTTTGTGCTTCTTTGCCCATAGAAGGCTTTTTCT...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGGCCAGGAAGAACCCATaGCCTAATCTAAGTAATCCA +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVARKNP*PNLSNP
Trigger: TGGATTACTTAGATTAGGCCATGGGTTCTTCCTGGC...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGGCCAGGAAGAACCCATaGCCTAATCTAAGTAATCCA +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGARKNP*PNLSNP
Trigger: TGGATTACTTAGATTAGGCCATGGGTTCTTCCTGGC...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCGATCTGGTGGAATTATaGGCTAGCTTAAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISDLVEL*ASLKGN
Trigger: ATTACCCTTTAAGCTAGCCCATAATTCCACCAGATC...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACTTGGTGTGGGATCTaGTGGAATTATGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: ECLVQFSPCSNSRLEKGETWCGI*WNYGLA
Trigger: AGCTAGCCCATAATTCCACCAGATCCCACACCAAGT...TTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAATGGTCGCCCTGACATaGAACCCAAATCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTMVALT*NPNLCP
Trigger: GGGACACAGATTTGGGTTCCATGTCAGGGCGACCAT...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCAATCTCCAACCAATTaGATCCTCTCCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLQSPTN*ILSTSL
Trigger: CAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTG...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCATCTCTCTTGGGAGTTaGTCTGTTTGTGAGAACTTT +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISISLGS*SVCENF
Trigger: AAAGTTCTCACAAACAGACCAACTCCCAAGAGAGAT...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCCCAAAGGCAAAAGGATaGATCAGACAAATGAATTCC +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISPKAKG*IRQMNS
Trigger: GGAATTCATTTGTCTGATCCATCCTTTTGCCTTTGG...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCCCAAAGGCAAAAGGATaGATCAGACAAATGAATTCC +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSPKAKG*IRQMNS
Trigger: GGAATTCATTTGTCTGATCCATCCTTTTGCCTTTGG...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCTGTGTACAAGATATATaGGGCACACTTTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSCVQDI*GTLFPS
Trigger: TGAAGGGAAAAGTGTGCCCCATATATCTTGTACACA...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCAGGAGTGATTGCAAATaGTATGGGGTTTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISRSDCK*YGVSFG
Trigger: TCCAAAAGAAACCCCATACCATTTGCAATCACTCCT...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTATTCACTGCTGTATTTaGTGTGGATGTCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLIHCCI*CGCLCS
Trigger: ACTGCAGAGACATCCACACCAAATACAGCAGTGAAT...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533014.5
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCAGCTAAGAATCTCTaGGCCAGCTTTGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANAAKNL*ASFAPK
Trigger: CTTTGGGGCAAAGCTGGCTCAGAGATTCTTAGCTGC...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260056.6
CDS-3UTR TCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCAACAAGTCAAATAGCTaGTGCTTTTCCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLNKSNS*CFSLLQ
Trigger: CTGGAGAAGGGAAAAGCATCAGCTATTTGACTTGTT...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTGCCTCAGCCTTTAGTTaGAATTACAACAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSASAFS*NYNKSN
Trigger: ATTTGACTTGTTGTAATTTCAACTAAAGGCTGAGGC...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACACATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTHQGSC*FLFFSV
Trigger: CACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATG...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGAGGTCTGCGATGTCCTaGGTCCAAGGGCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMRSAMS*VQGLES
Trigger: TGACTCCAGCCCTTGGACTCAGGACATCGCAGACCT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR TCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTAGGTCTGCGATGTCCTaGGTCCAAGGGCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVRSAMS*VQGLES
Trigger: TGACTCCAGCCCTTGGACTCAGGACATCGCAGACCT...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR TCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAAATGGATGTGCGAATaGGTCACGCACGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSAKWMCE*VTHARE
Trigger: TTCCCTTGCGTGCGTGACTCATTCGCACATCCATTT...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR TCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCAAAACGTTTGGTCTGTaGAATAGCGGAATCATTAGC +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLKTFGL*NSGIIS
Trigger: GCTAATGATTCCGCTATTTCACAGACCAAACGTTTT...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCGTAGTAATGAGACTTTaGGAAAGAGTGCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSVVMRL*ERVLIH
Trigger: ATGAATCAGCACTCTTTCTCAAAGTCTCATTACTAC...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGCTACAGAAACATCTaGCAGCATCAACAGCATACA +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSSYRNI*QHQQHT
Trigger: TGTATGCTGTTGATGCTGTCAGATGTTTCTGTAGCT...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCTCAACATATCAGAACTaGGATTGTCACCATCTACAG +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLSTYQN*DCHHLQ
Trigger: CTGTAGATGGTGACAATCTCAGTTCTGATATGTTGA...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTACACACTTGCAACTGTaGGACAAAGTTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGTHLQL*DKVGSS
Trigger: TGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGT...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGCCAAGCCTGACTCCATaGCATGAGTATCATGCATTT +
Preference number: 4 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTEPSLTP*HEYHAF
Trigger: AAATGCATGATACTCATGTCATGGAGTCAGGCTTGG...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTACAGAGGCTATTACCTaGGGCAGACTGTCCCATAGT +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACTEAIT*GRLSHS
Trigger: ACTATGGGACAGTCTGCCTCAGGTAATAGCCTCTGT...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACACTAGCCTTTGTGCTCTaGCCTCTTGTCCAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTLAFVL*PLVQRS
Trigger: ACTCCTTTGGACAAGAGGTCAGAGCACAAAGGCTAG...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCTCAACAGTAAGACCGTaGTCTACATCTGATACCAAT +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLSTVRP*STSDTN
Trigger: ATTGGTATCAGATGTAGATCACGGTCTTACTGTTGA...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCTTAGAAGCCAGCATTTaGAATTTTCTATCACAGGGA +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSLEASI*NFLSQG
Trigger: TCCCTGTGATAGAAAATTTCAAATGCTGGCTTCTAA...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCAAGGAGGAGGAGGAGTaGTTGCAAATGGTATGGGGT +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGKEEEE*LQMVWG
Trigger: ACCCCATACCATTTGCAATCACTCCTCCTCCTCCTT...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGAATTCTTCAGCTCGCTaGTGGGAAACCTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSNSSAR*WETSLL
Trigger: AAGGAGAGAGGTTTCCCAGCAGCGAGCTGAAGAATT...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTCTGCAGATCATGGAGTaGCTAGTGCAATTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGLQIME*LVQFSP
Trigger: AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAG...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTTACTATCAAGGACTGTaGTCTGCTAGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACYYQGL*SARSPA
Trigger: TGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTA...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GAGTTCCCACATGCACCCACTGATGTGCAGGAGGGATCCCTACAGTACATTTCCGAGAAATGCCAGAAATaGTTTATCCACATCATGTCT +
Preference number: 4 (lower is better)
Translates to: EFPHAPTDVQEGSLQYISEKCQK*FIHIMS
Trigger: AGACATGATGTGGATAAAGCATTTCTGGCATTTCTC...GGAAATGTACTGTAGGGATCCCTCCTGCACATCAGTGGGTGCATGTGGGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGATGCATAATCTCATGTaGAAGACACTGGTCAATCTA +
Preference number: 4 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWMHNLM*KTLVNL
Trigger: TAGATTGACCAGTGTCTTGCACATGAGATTATGCAT...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCGGAGAGGAGATGAAATaGCATCTCCCTTACTCTAAT +
Preference number: 4 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLGEEMK*HLPYSN
Trigger: ATTAGAGTAAGGGAGATGGCATTTCATCTCCTCTCC...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGGCCGTCTATCAGCCTTaGAAGGGTGAAAGTTATTTT +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVAVYQP*KGESYF
Trigger: AAAATAACTTTCACCCTTGCAAGGCTGATAGACGGC...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTAGAGAGAGACCACCTTaGCTGAAGTTTGTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLRERPP*LKFVKK
Trigger: TTTCTTTACAAACTTCAGGCAAGGTGGTCTCTCTCT...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTGAAAGAGGTTTAAATTaGTCTGTGAGGTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: RQISPASHGPSGQLLIPFERGLN*SVRYFS
Trigger: ACTGAAATACCTCACAGAGCAATTTAAACCTCTTTC...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGAGGAGGAGGAGTGATTaGAAATGGTATGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: DCALLGALHYSPLIHSILRRRSD*KWYGVS
Trigger: AGAAACCCCATACCATTTGCAATCACTCCTCCTCCT...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCTCTTCAGCTCGCTGCTaGGAAACCTCTCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGSSARC*ETSLLS
Trigger: TGAAAGGAGAGAGGTTTCCCAGCAGCGAGCTGAAGA...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCATTATCAGATTCCTTaGCTGAGGTCTCCAGATAAT +
Preference number: 4 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLHYQIP*LRSPDN
Trigger: ATTATCTGGAGACCTCAGCCAAGGAATCTGATAATG...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCTTTACACAGCTGGTTTaGGATTTTTCTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLFTQLV*DFSPHP
Trigger: GGGGTGGGGAGAAAAATCCCAAACCAGCTGTGTAAA...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527633.6
ENST00000534141.5
CDS-3UTR CCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGTTTTCAAAATCTCCATaGGGTCGTCAATACGCACCA +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVFSKSP*GRQYAP
Trigger: TGGTGCGTATTGACGACCCCATGGAGATTTTGAAAA...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTAATGATTGTTACTGTTaGTCATGGGTAAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SPDLPSISWPIRAVADSFNDCYC*SWVKVS
Trigger: TGAAACCTTTACCCATGACCAACAGTAACAATCATT...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCCATCTACAGCAACAGTaGAATTACACATCATATCCT +
Preference number: 4 (lower is better)
Translates to: DVTYYQGLCSARSPALQSHLQQQ*NYTSYP
Trigger: AGGATATGATGTGTAATTCCACTGTTGCTGTAGATG...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGAACAAGTCAAACTTCTaGGATGCCTTTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVNKSNF*DAFLFP
Trigger: GGGAAAGAGAAAGGCATCCCAGAAGTTTGACTTGTT...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGCTGATGGGCTGTGGATaGGTAAGTTATGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSLMGCG*VSYGKA
Trigger: AGCCTTTCCATAACTTACCCATCCACAGCCCATCAG...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCTGATGGGCTGTGGATaGGTAAGTTATGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLLMGCG*VSYGKA
Trigger: AGCCTTTCCATAACTTACCCATCCACAGCCCATCAG...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAAATGTGGCAAATCATTaGCCTAATTCTGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRNVANH*PNSVGI
Trigger: GATTCCCACAGAATTAGGCCAATGATTTGCCACATT...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTGGTGGGATGCACTTGTaGCAGAAGAACGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVGGMHL*QKNEAP
Trigger: TGGGGCCTCGTTCTTCTGCCACAAGTGCATCCCACC...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAATCTCTCTTGGGAGTTaGTCTGTTTGTGAGAACTTT +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRISLGS*SVCENF
Trigger: AAAGTTCTCACAAACAGACCAACTCCCAAGAGAGAT...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGGTCTCAGCTAATTTGTaGCATACTAGAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGVSANL*HTRTPH
Trigger: GTGAGGAGTTCTAGTATGCCACAAATTAGCTGAGAC...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTAGGAGTGATTGCAAATaGTATGGGGTTTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: QISPASHGPSGQLLIPFLRSDCK*YGVSFG
Trigger: TCCAAAAGAAACCCCATACCATTTGCAATCACTCCT...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATCATGTCCTGAGCTTCTaGGAATTCTTCAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANHVLSF*EFFSSL
Trigger: CAGCGAGCTGAAGAATTCTCAGAAGCTCAGGACATG...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AAACAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTCATGTCCTGAGCTTCTaGGAATTCTTCAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KQKQHALQIMECLVQFSPHVLSF*EFFSSL
Trigger: CAGCGAGCTGAAGAATTCTCAGAAGCTCAGGACATG...AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATCATCAGGGCAGTTGCTaGTTCCTTTTCTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANHQGSC*FLFFSV
Trigger: CACGGAGAAGAAAAGGAATCAGCAACTGCCCTGATG...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGCAGACTGGAAAAGGGTaGAACCATTATATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DCALLGALHYSPLIHSILQTGKG*NHYMFC
Trigger: GCAGAACATATAATGGTTTCACCCTTTTCCAGTCTG...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTAGCTACAGAAACATCTaGCAGCATCAACAGCATACA +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGSYRNI*QHQQHT
Trigger: TGTATGCTGTTGATGCTGTCAGATGTTTCTGTAGCT...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGAGGCTAATAGAGCAATaGTCCCTAAGTACTCATTAC +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGRLIEQ*SLSTHY
Trigger: GTAATGAGTACTTAGGGATCATTGCTCTATTAGCCT...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGATGGATCAGACAAATaGATTCCTTTTAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGDGSDK*IPFKAP
Trigger: GGGTGCCTTAAAAGGAATTCATTTGTCTGATCCATC...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTTCTATCACAGGGACATaGAAGCCTAAACCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSASITGT*KPKPAL
Trigger: TAAGGCCGGTTTAGGCTTTCATGTCCCTGTGATAGA...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCAGAGGTCTCCTAATTaGTCAATTAAACTAAGATCG +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSQRSPN*SIKLRS
Trigger: CGATCTTAGTTTAATTGATCAATTAGGAGACCTCTG...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCCCACAGAGCTCAAGCTaGACCAGCCTTCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LHELLAKDYILGRHQCISPQSSS*TSLLSG
Trigger: CCCGGAGAGAAGGCTGGTGCAGCTTGAGCTCTGTGG...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525117.5
ENST00000532548.5
CDS-3UTR GCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTACGCAAGGGAAGGTCTaGGATGTCCTGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVTQGKV*DVLSPR
Trigger: CCTTGGACTCAGGACATCGCAGACCTTCCCTTGCGT...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR GCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAGAGAAATGCCAGAAATaGTTTATCCACATCATGTCT +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGREKCQK*FIHIMS
Trigger: AGACATGATGTGGATAAAGCATTTCTGGCATTTCTC...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTAGAGAGAGACCACCTTaGCTGAAGTTTGTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: IKDCALLGALHYSPLIHSRERPP*LKFVKK
Trigger: TTTCTTTACAAACTTCAGGCAAGGTGGTCTCTCTCT...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCCTCTCCAAACAGGATTaGAAGAGGTTCTACGTAAAT +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSLSKQD*KRFYVN
Trigger: ATTTACGTAGAACCTCTTGCAATCCTGTTTGGAGAG...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTCTCTCCAAACAGGATTaGAAGAGGTTCTACGTAAAT +
Preference number: 4 (lower is better)
Translates to: IKDCALLGALHYSPLIHSLSKQD*KRFYVN
Trigger: ATTTACGTAGAACCTCTTGCAATCCTGTTTGGAGAG...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTCATTATCAGATTCCTTaGCTGAGGTCTCCAGATAAT +
Preference number: 4 (lower is better)
Translates to: IKDCALLGALHYSPLIHSHYQIP*LRSPDN
Trigger: ATTATCTGGAGACCTCAGCCAAGGAATCTGATAATG...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCGCTCCAACTCCAGACTaGAAAAGGGTGAAACCATTA +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLAPTPD*KRVKPL
Trigger: TAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGC...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGCACAGAGACTGTACTTaGCCTTCCCAGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSHRDCT*PSQFWF
Trigger: AAACCAAAACTGGGAAGGCCAAGTACAGTCTCTGTG...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGAACAAGTCAAACTTCTaGGATGCCTTTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTENKSNF*DAFLFP
Trigger: GGGAAAGAGAAAGGCATCCCAGAAGTTTGACTTGTT...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCACTGTGAGACAAAGTTaGGTCATCATGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGTVRQS*VIMCWG
Trigger: TCCCCAGCACATGATGACCCAACTTTGTCTCACAGT...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCGATCTGGTGGAATTATaGGCTAGCTTAAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLDLVEL*ASLKGN
Trigger: ATTACCCTTTAAGCTAGCCCATAATTCCACCAGATC...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTACTTGGTGTGGGATCTaGTGGAATTATGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACTWCGI*WNYGLA
Trigger: AGCTAGCCCATAATTCCACCAGATCCCACACCAAGT...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTTCATTCATGTGGCTTaGCTTAAAAGAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: PDLPSISWPIRAVADSFSFIHVA*LKRRCF
Trigger: GAAACATCTTCTTTTAAGCCAAGCCACATGAATGAA...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAACATGTCAGGACCATaGTTGAGAAAAGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSNMSGP*LRKVTS
Trigger: ACTGGTTACTTTTCTCAACCATGGTCCTGACATGTT...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGGGAGGGCCAGTCTCTTaGCCTAACAACGTGCAACCA +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMGGPVS*PNNVQP
Trigger: TGGTTGCACGTTGTTAGGCCAAGAGACTGGCCCTCC...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCCCAAAGGCAAAAGGATaGATCAGACAAATGAATTCC +
Preference number: 4 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLPKAKG*IRQMNS
Trigger: GGAATTCATTTGTCTGATCCATCCTTTTGCCTTTGG...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGAGCTCCAACCATCTaGTATGTCTGGAAGACACTT +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACGAPTI*YVWKTL
Trigger: AAGTGTCTTCCAGACATACCAGATGGTTGGAGCTCC...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGTGTGTACAAGATATATaGGGCACACTTTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVCVQDI*GTLFPS
Trigger: TGAAGGGAAAAGTGTGCCCCATATATCTTGTACACA...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAGAATGGACAGTCATATaGTTTGGTGATTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGREWTVI*FGDLTN
Trigger: GTTTGTCAAATCACCAAACCATATGACTGTCCATTC...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CAA 72 bp ATGCTTTTCCCTTCTCCAGGTAAGGGTGAGGATACATaGTTCACAAGTGTGTTCTGTCTGGCTTCACTGATG +
Preference number: 4 (lower is better)
Translates to: MLFPSPGKGEDT*FTSVFCLASLM
Trigger: CATCAGTGAAGCCAGACAGAACACACTTGTGAACAATGTATCCTCACCCTTACCTGGAGAAGGGAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534141.5
CDS-3UTR TCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCACATCCCAAAGTTCTTaGAAGTGCCTGTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGTSQSS*KCLWTR
Trigger: TCTTGTCCACAGGCACTTTCAAGAACTTTGGGATGT...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTTTTGAGAAAGAGTGCTaGTTCATGGACTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACFEKEC*FMDFPH
Trigger: ATGGGGGAAGTCCATGAATCAGCACTCTTTCTCAAA...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGGTAGTAATGAGACTTTaGGAAAGAGTGCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVVVMRL*ERVLIH
Trigger: ATGAATCAGCACTCTTTCTCAAAGTCTCATTACTAC...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCAGCTACAGAAACATCTaGCAGCATCAACAGCATACA +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLSYRNI*QHQQHT
Trigger: TGTATGCTGTTGATGCTGTCAGATGTTTCTGTAGCT...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGTCAACATATCAGAACTaGGATTGTCACCATCTACAG +
Preference number: 4 (lower is better)
Translates to: DCALLGALHYSPLIHSILSTYQN*DCHHLQ
Trigger: CTGTAGATGGTGACAATCTCAGTTCTGATATGTTGA...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCAGGAAAAACACAGTaGGGCCAACCAAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: QKQHALQIMECLVQFSPCSGKTQ*GQPKVS
Trigger: TGATACTTTTGGTTGGCCTCACTGTGTTTTTCCTGA...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGAGGCTAATAGAGCAATaGTCCCTAAGTACTCATTAC +
Preference number: 4 (lower is better)
Translates to: DCALLGALHYSPLIHSILRLIEQ*SLSTHY
Trigger: GTAATGAGTACTTAGGGATCATTGCTCTATTAGCCT...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGGGAACACATTTTGTCTaGAGGATGAGAAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTEGTHFV*RMRSKC
Trigger: ACATTTGCTTCTCATCCTTCAGACAAAATGTGTTCC...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTTCAACAGGACATCAATaGATGGACCGACAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSASTGHQ*MDRQSK
Trigger: CTTGCTTTGTCGGTCCATTCATTGATGTCCTGTTGA...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGAGGCCACATGTTGTTTaGCTATATGAAATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSRPHVV*LYEMSR
Trigger: CCTGGACATTTCATATAGTCAAACAACATGTGGCCT...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAAACATAGGCTACAATaGATGGACAGTCATATGGTT +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSKHRLQ*MDSHMV
Trigger: AACCATATGACTGTCCATTCATTGTAGCCTATGTTT...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTGTGCAATTTTCTCCTTaGTCCAACTCCAGACTGGAA +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSAVQFSP*SNSRLE
Trigger: TTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCAC...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGATGCATAATCTCATGTaGAAGACACTGGTCAATCTA +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVMHNLM*KTLVNL
Trigger: TAGATTGACCAGTGTCTTGCACATGAGATTATGCAT...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AAACAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTGTCAAACTTCTGGGATaGCTTTCTCTTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: KQKQHALQIMECLVQFSPVKLLG*LSLSHR
Trigger: CCTGTGGGAAAGAGAAAGGCATCCCAGAAGTTTGAC...AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGCAAAACCGAGATTCATaGCTCCATTTTTACCAAGGG +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSQNRDS*LHFYQG
Trigger: CCCTTGGTAAAAATGGAGGCATGAATCTCGGTTTTG...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATGGGCTGTGGATGGGTAAGTTATGGAAAGGCTGGGAGGAGCAACAAGGAAGAAATGATTGTTACTGTTaGTCATGGGTAAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: DGLWMGKLWKGWEEQQGRNDCYC*SWVKVS
Trigger: TGAAACCTTTACCCATGACCAACAGTAACAATCATT...TCTTCCTTGTTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCACAGCCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTTATTTTGGTCATATCTaGTCTGTTTCCTCATACTAC +
Preference number: 4 (lower is better)
Translates to: DLPSISWPIRAVADSFSSYFGHI*SVSSYY
Trigger: GTAGTATGAGGAAACAGACCAGATATGACCAAAATA...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTTGGTCTGTCCAAGATaGAGAGTACCAGGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: QKQHALQIMECLVQFSPCLVCPR*RVPGSK
Trigger: TTTACTTCCTGGTACTCTCCATCTTGGACAGACCAA...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCAAAATCCTAAGCCTTaGTCTGTCCAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGQNPKP*SVQDGE
Trigger: CTCTCCATCTTGGACAGACCAAGGCTTAGGATTTTG...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGACTACCACCCCACCTTaGCACTTAAATGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: DCALLGALHYSPLIHSILTTTPP*HLNVYL
Trigger: CAAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGT...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCCCTTCTCCAGGTAAGGGTGAGGATACATTGTTCACAAGTGTGTTCTGTCTGGACTACCACCCCACCTTaGCACTTAAATGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: SLLQVRVRIHCSQVCSVWTTTPP*HLNVYL
Trigger: CAAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGT...CCAGACAGAACACACTTGTGAACAATGTATCCTCACCCTTACCTGGAGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534141.5
CDS-3UTR CCA 90 bp GAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAAATGTGGCAAATCATTaGCCTAATTCTGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: ECLVQFSPCSNSRLEKGENVANH*PNSVGI
Trigger: GATTCCCACAGAATTAGGCCAATGATTTGCCACATT...TTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGAACATGTCAGGACCATaGTTGAGAAAAGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: DCALLGALHYSPLIHSILNMSGP*LRKVTS
Trigger: ACTGGTTACTTTTCTCAACCATGGTCCTGACATGTT...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCCAATCTCCAACCAATTaGATCCTCTCCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: QKQHALQIMECLVQFSPCQSPTN*ILSTSL
Trigger: CAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTG...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGGGGAAGAAACGCTTTTaGATGTTGGTAATTATGTAC +
Preference number: 4 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGGKKRF*MLVIMY
Trigger: GTACATAATTACCAACATCCAAAAGCGTTTCTTCCC...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTGACTCGGGTCATCAGTaGGTTATATTTCTAACAGGC +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSADSGHQ*VIFLTG
Trigger: GCCTGTTAGAAATATAACCCACTGATGACCCGAGTC...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CAA 72 bp TTCCTGATAATGAGTTTACAACCCTGGAATTGCCTATaGGGAGAGAGAGAGAGACCACCTTGCCTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: FLIMSLQPWNCL*GERERPPCLKF
Trigger: AAACTTCAGGCAAGGTGGTCTCTCTCTCTCTCCCAATAGGCAATTCCAGGGTTGTAAACTCATTATCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCGGAAAAGACCCTGAGTaGATCTTCGGACGAGGCACG +
Preference number: 4 (lower is better)
Translates to: LHELLAKDYILGRHQCISGKDPE*IFGRGT
Trigger: CGTGCCTCGTCCGAAGATTCACTCAGGGTCTTTTCC...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532548.5
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATTTTGAGAAAGAGTGCTaGTTCATGGACTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANFEKEC*FMDFPH
Trigger: ATGGGGGAAGTCCATGAATCAGCACTCTTTCTCAAA...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTTTTGAGAAAGAGTGCTaGTTCATGGACTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLFEKEC*FMDFPH
Trigger: ATGGGGGAAGTCCATGAATCAGCACTCTTTCTCAAA...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTTCAGGAAAAACACAGTaGGGCCAACCAAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSASGKTQ*GQPKVS
Trigger: TGATACTTTTGGTTGGCCTCACTGTGTTTTTCCTGA...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTTCAGGAAAAACACAGTaGGGCCAACCAAAAGTATCA +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACSGKTQ*GQPKVS
Trigger: TGATACTTTTGGTTGGCCTCACTGTGTTTTTCCTGA...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTCCTGACTCCATGACATaGGTATCATGCATTTTCACT +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACPDSMT*VSCIFT
Trigger: AGTGAAAATGCATGATACTCATGTCATGGAGTCAGG...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCGGAACACATTTTGTCTaGAGGATGAGAAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: QKQHALQIMECLVQFSPCGTHFV*RMRSKC
Trigger: ACATTTGCTTCTCATCCTTCAGACAAAATGTGTTCC...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATTCAACAGGACATCAATaGATGGACCGACAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANSTGHQ*MDRQSK
Trigger: CTTGCTTTGTCGGTCCATTCATTGATGTCCTGTTGA...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTAGCCTTTGTGCTCTaGCCTCTTGTCCAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVLAFVL*PLVQRS
Trigger: ACTCCTTTGGACAAGAGGTCAGAGCACAAAGGCTAG...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCCCAGTTTTCTTCCCATaGAGAATAGGAACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QKQHALQIMECLVQFSPCPVFFP*RIGTRR
Trigger: TCTTCTTGTTCCTATTCTTCATGGGAAGAAAACTGG...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTAAGGAGGAGGAGGAGTaGTTGCAAATGGTATGGGGT +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVKEEEE*LQMVWG
Trigger: ACCCCATACCATTTGCAATCACTCCTCCTCCTCCTT...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCAAAACAAAAGCAACATaGTCTGCAGATCATGGAGTG +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLKTKAT*SADHGV
Trigger: CACTCCATGATCTGCAGAGCATGTTGCTTTTGTTTT...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTATGCATAATCTCATGTaGAAGACACTGGTCAATCTA +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGMHNLM*KTLVNL
Trigger: TAGATTGACCAGTGTCTTGCACATGAGATTATGCAT...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGGAAAGAGGTTTAAATTaGTCTGTGAGGTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVERGLN*SVRYFS
Trigger: ACTGAAATACCTCACAGAGCAATTTAAACCTCTTTC...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCTGTGGCTCCTTGACCTaGGGGGAAAAGACCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LHELLAKDYILGRHQCISCGSLT*GEKTLS
Trigger: ACTCAGGGTCTTTTCCCCCCAGGTCAAGGAGCCACA...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532548.5
CDS-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAACTCATTTACACAGCTaGTTTGGGATTTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTTHLHS*FGIFLP
Trigger: GGGGAGAAAAATCCCAAACCAGCTGTGTAAATGAGT...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527633.6
CDS-3UTR CCA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCTGTTACTGTTGGTCATaGGTAAAGGTTTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: HALQIMECLVQFSPCSNSCYCWS*VKVSFH
Trigger: ATGAAATGAAACCTTTACCCATGACCAACAGTAACA...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTTATTTTGGTCATATCTaGTCTGTTTCCTCATACTAC +
Preference number: 4 (lower is better)
Translates to: IKDCALLGALHYSPLIHSYFGHI*SVSSYY
Trigger: GTAGTATGAGGAAACAGACCAGATATGACCAAAATA...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATCAAAATCCTAAGCCTTaGTCTGTCCAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANQNPKP*SVQDGE
Trigger: CTCTCCATCTTGGACAGACCAAGGCTTAGGATTTTG...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACACAATCTCCAACCAATTaGATCCTCTCCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTQSPTN*ILSTSL
Trigger: CAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTG...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTTTAAGGATCTACACTTaGCATCAGACCATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGLRIYT*HQTIQS
Trigger: ACTTTGAATGGTCTGATGCCAAGTGTAGATCCTTAA...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCAAGTTTGTAAAGAAATaGAGGGTGACAGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLKFVKK*RVTVVM
Trigger: CATTACTACTGTCACCCTCCATTTCTTTACAAACTT...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGACTCGGGTCATCAGTaGGTTATATTTCTAACAGGC +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANDSGHQ*VIFLTG
Trigger: GCCTGTTAGAAATATAACCCACTGATGACCCGAGTC...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TGCTCCAATCTCCAACCAATTGGATCCTCTCCACATCTTTGCCTCTTGACAGAGGAATGGACAGTCATATaGTTTGGTGATTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: CSNLQPIGSSPHLCLLTEEWTVI*FGDLTN
Trigger: GTTTGTCAAATCACCAAACCATATGACTGTCCATTC...CTCTGTCAAGAGGCAAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTATAGGCTACAATGAATaGACAGTCATATGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGIGYNE*TVIWFG
Trigger: ACCAAACCATATGACTGTCCATTCATTGTAGCCTAT...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
3UTR CAA 72 bp GGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTaGGTCATATCTGGTCTGTTTCCTCATACTACTCAA +
Preference number: 4 (lower is better)
Translates to: GALHYSPLIHSI*VISGLFPHTTQ
Trigger: TTGAGTAGTATGAGGAAACAGACCAGATATGACCAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AAACAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTCAGACTGGAAAAGGGTaGAACCATTATATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KQKQHALQIMECLVQFSPQTGKG*NHYMFC
Trigger: GCAGAACATATAATGGTTTCACCCTTTTCCAGTCTG...AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CTTTCATGGCCATCCAACTTCTTCCCTAGAGCCTACATTGATAGAAAATGTTTTAAACACAGGCAAAAGTaGGAAAGGCCCAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: LSWPSNFFPRAYIDRKCFKHRQK*ERPSQT
Trigger: AGTCTGACTGGGCCTTTCTCACTTTTGCCTGTGTTT...AAAACATTTTCTATCAATGTAGGCTCTAGGGAAGAAGTTGGATGGCCATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525117.5
CDS-3UTR TCA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCAGATCTGTAGCTGAGTaGATCTTCGGACGAGGCACG +
Preference number: 4 (lower is better)
Translates to: LHELLAKDYILGRHQCISRSVAE*IFGRGT
Trigger: CGTGCCTCGTCCGAAGATTCACTCAGCTACAGATCT...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525117.5
CDS-3UTR TCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGGTAGTAATGAGACTTTaGGAAAGAGTGCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSVVMRL*ERVLIH
Trigger: ATGAATCAGCACTCTTTCTCAAAGTCTCATTACTAC...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTTATAAAAATGGGTCGTaGGACTTTTCATCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFYKNGS*DFSSVA
Trigger: AGCAACAGATGAAAAGTCTCACGACCCATTTTTATA...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTAGCTACAGAAACATCTaGCAGCATCAACAGCATACA +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLSYRNI*QHQQHT
Trigger: TGTATGCTGTTGATGCTGTCAGATGTTTCTGTAGCT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AAACAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGGCCTGGGTTAAGATaGCTGTATTTAGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KQKQHALQIMECLVQFSPWPGLR*LYLVSF
Trigger: AAAGGACACTAAATACAGTCATCTTAACCCAGGCCA...AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTTGGCCTGGGTTAAGATaGCTGTATTTAGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLWPGLR*LYLVSF
Trigger: AAAGGACACTAAATACAGTCATCTTAACCCAGGCCA...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATATTCAGTATGAGTCATaGACTGAAACTTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANIQYES*TETWCG
Trigger: CCCACACCAAGTTTCAGTTCATGACTCATACTGAAT...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGACTGAGGAGAGGAGATaGAATGCCATCTCCCTTACT +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMTEERR*NAISLT
Trigger: AGTAAGGGAGATGGCATTTCATCTCCTCTCCTCAGT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTTAGAAGCCAGCATTTaGAATTTTCTATCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QKQHALQIMECLVQFSPCLEASI*NFLSQG
Trigger: TCCCTGTGATAGAAAATTTCAAATGCTGGCTTCTAA...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCAATGACAGTTCAATCTaGTTCCACGAGCAGAATTTT +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLNDSSI*FHEQNF
Trigger: AAAATTCTGCTCGTGGAAGCAGATTGAACTGTCATT...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGGAAAGAGGTTTAAATTaGTCTGTGAGGTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: DCALLGALHYSPLIHSILERGLN*SVRYFS
Trigger: ACTGAAATACCTCACAGAGCAATTTAAACCTCTTTC...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGCAGCTCACATAACTTTCATGGCCATCCAACTTCTTCCCTAGAGCCTACATTGTCTAAACTGTCACCATaGGATAGGACCTATTTCATT +
Preference number: 4 (lower is better)
Translates to: SSSHNFHGHPTSSLEPTLSKLSP*DRTYFI
Trigger: AATGAAATAGGTCCTATCCCATGGTGACAGTTTAGA...CAATGTAGGCTCTAGGGAAGAAGTTGGATGGCCATGAAAGTTATGTGAGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525117.5
CDS-3UTR CCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCCATCTACAGCAACAGTaGAATTACACATCATATCCT +
Preference number: 4 (lower is better)
Translates to: QKQHALQIMECLVQFSPCHLQQQ*NYTSYP
Trigger: AGGATATGATGTGTAATTCCACTGTTGCTGTAGATG...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTATGGGTCATCATGTGCTaGGGACACTGGATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLWVIMC*GHWIFA
Trigger: GGCAAAAATCCAGTGTCCCCAGCACATGATGACCCA...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTACTGTGAGACAAAGTTaGGTCATCATGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVTVRQS*VIMCWG
Trigger: TCCCCAGCACATGATGACCCAACTTTGTCTCACAGT...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGGATGGGTAAGTTATaGAAAGGCTGGGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMWMGKL*KGWEEQ
Trigger: TTGCTCCTCCCAGCCTTTCCATAACTTACCCATCCA...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAACATGTCAGGACCATaGTTGAGAAAAGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSANMSGP*LRKVTS
Trigger: ACTGGTTACTTTTCTCAACCATGGTCCTGACATGTT...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGTCTCAGCTAATTTGTaGCATACTAGAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANVSANL*HTRTPH
Trigger: GTGAGGAGTTCTAGTATGCCACAAATTAGCTGAGAC...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGTTAAGGATCTACACTTaGCATCAGACCATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSLRIYT*HQTIQS
Trigger: ACTTTGAATGGTCTGATGCCAAGTGTAGATCCTTAA...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCGGGAAGAAACGCTTTTaGATGTTGGTAATTATGTAC +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLGKKRF*MLVIMY
Trigger: GTACATAATTACCAACATCCAAAAGCGTTTCTTCCC...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCGAATGGACAGTCATATaGTTTGGTGATTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: QKQHALQIMECLVQFSPCEWTVI*FGDLTN
Trigger: GTTTGTCAAATCACCAAACCATATGACTGTCCATTC...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTGCCTCAGCCTTTAGTTaGAATTACAACAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: SPCSNSRLEKGETIICSAASAFS*NYNKSN
Trigger: ATTTGACTTGTTGTAATTTCAACTAAAGGCTGAGGC...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGACATCCCAAAGTTCTTaGAAGTGCCTGTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMTSQSS*KCLWTR
Trigger: TCTTGTCCACAGGCACTTTCAAGAACTTTGGGATGT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATAAAACGTTTGGTCTGTaGAATAGCGGAATCATTAGC +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANKTFGL*NSGIIS
Trigger: GCTAATGATTCCGCTATTTCACAGACCAAACGTTTT...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AAACAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTAAAACGTTTGGTCTGTaGAATAGCGGAATCATTAGC +
Preference number: 4 (lower is better)
Translates to: KQKQHALQIMECLVQFSPKTFGL*NSGIIS
Trigger: GCTAATGATTCCGCTATTTCACAGACCAAACGTTTT...AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTTATAAAAATGGGTCGTaGGACTTTTCATCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACYKNGS*DFSSVA
Trigger: AGCAACAGATGAAAAGTCTCACGACCCATTTTTATA...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTCAGAGGTCTCCTAATTaGTCAATTAAACTAAGATCG +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACQRSPN*SIKLRS
Trigger: CGATCTTAGTTTAATTGATCAATTAGGAGACCTCTG...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTGTGCAATTTTCTCCTTaGTCCAACTCCAGACTGGAA +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVVQFSP*SNSRLE
Trigger: TTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCAC...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AAACAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTAAAACAAAAGCAACATaGTCTGCAGATCATGGAGTG +
Preference number: 4 (lower is better)
Translates to: KQKQHALQIMECLVQFSPKTKAT*SADHGV
Trigger: CACTCCATGATCTGCAGAGCATGTTGCTTTTGTTTT...AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTGCTCCAACTCCAGACTaGAAAAGGGTGAAACCATTA +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVAPTPD*KRVKPL
Trigger: TAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGC...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCTGTTACTGTTGGTCATaGGTAAAGGTTTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: KATCSADHGVPSAIFSLLCYCWS*VKVSFH
Trigger: ATGAAATGAAACCTTTACCCATGACCAACAGTAACA...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGTATTTTGGTCATATCTaGTCTGTTTCCTCATACTAC +
Preference number: 4 (lower is better)
Translates to: RLEKGETIICSANAGLWSYFGHI*SVSSYY
Trigger: GTAGTATGAGGAAACAGACCAGATATGACCAAAATA...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AAACAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTCACCTCCATTTGAATTaGAGATTTGCAGTAACACAG +
Preference number: 4 (lower is better)
Translates to: KQKQHALQIMECLVQFSPHLHLN*RFAVTQ
Trigger: CTGTGTTACTGCAAATCTCCAATTCAAATGGAGGTG...AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACACATCTACAGCAACAGTaGAATTACACATCATATCCT +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTHLQQQ*NYTSYP
Trigger: AGGATATGATGTGTAATTCCACTGTTGCTGTAGATG...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGGCCAGGAAGAACCCATaGCCTAATCTAAGTAATCCA +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMARKNP*PNLSNP
Trigger: TGGATTACTTAGATTAGGCCATGGGTTCTTCCTGGC...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTGATCTGGTGGAATTATaGGCTAGCTTAAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLDLVEL*ASLKGN
Trigger: ATTACCCTTTAAGCTAGCCCATAATTCCACCAGATC...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACATTAAGGATCTACACTTaGCATCAGACCATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTLRIYT*HQTIQS
Trigger: ACTTTGAATGGTCTGATGCCAAGTGTAGATCCTTAA...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTGGAGCTCCAACCATCTaGTATGTCTGGAAGACACTT +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIGAPTI*YVWKTL
Trigger: AAGTGTCTTCCAGACATACCAGATGGTTGGAGCTCC...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATAGGAGTGATTGCAAATaGTATGGGGTTTCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANRSDCK*YGVSFG
Trigger: TCCAAAAGAAACCCCATACCATTTGCAATCACTCCT...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGCATATCCAATGGAGCTaGTTTGGGATTTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMHIQWS*FGIFLP
Trigger: GGGGAGAAAAATCCCAAACCAGCTCCATTGGATATG...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533486.5
CDS-3UTR TCA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCCTCAGCCTTTAGTTaGAATTACAACAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: PCSNSRLEKGETIICSANASAFS*NYNKSN
Trigger: ATTTGACTTGTTGTAATTTCAACTAAAGGCTGAGGC...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTGCCTCAGCCTTTAGTTaGAATTACAACAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLASAFS*NYNKSN
Trigger: ATTTGACTTGTTGTAATTTCAACTAAAGGCTGAGGC...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCAAACACAGGCAAAAGTaGGAAAGGCCCAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: LHELLAKDYILGRHQCISKHRQK*ERPSQT
Trigger: AGTCTGACTGGGCCTTTCTCACTTTTGCCTGTGTTT...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525117.5
ENST00000532548.5
CDS-3UTR TCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTTTTTTAATCCCCTTCTaGGTCTGGCCAAGGGTATAT +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVFLIPF*VWPRVY
Trigger: ATATACCCTTGGCCAGACTCAGAAGGGGATTAAAAA...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGGCCTGGGTTAAGATaGCTGTATTTAGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMWPGLR*LYLVSF
Trigger: AAAGGACACTAAATACAGTCATCTTAACCCAGGCCA...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTGTGCAATTTTCTCCTTaGTCCAACTCCAGACTGGAA +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIVQFSP*SNSRLE
Trigger: TTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCAC...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTAGTGCAATTTTCTCCTTaGTCCAACTCCAGACTGGAA +
Preference number: 4 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLVQFSP*SNSRLE
Trigger: TTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCAC...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CTTTCATGGCCATCCAACTTCTTCCCTAGAGCCTACATTGATAGAAAATGTTTTACTCATTTACACAGCTaGAAGGCAAACACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSWPSNFFPRAYIDRKCFTHLHS*KANTGK
Trigger: TTTGCCTGTGTTTGCCTTGCAGCTGTGTAAATGAGT...AAAACATTTTCTATCAATGTAGGCTCTAGGGAAGAAGTTGGATGGCCATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525117.5
CDS-3UTR GCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTGGAGAGGAGATGAAATaGCATCTCCCTTACTCTAAT +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVGEEMK*HLPYSN
Trigger: ATTAGAGTAAGGGAGATGGCATTTCATCTCCTCTCC...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGATAGATCTTGTGGACTaGTTTATGTCAGTGACCCAC +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMIDLVD*FMSVTH
Trigger: GTGGGTCACTGACATAAAGCAGTCCACAAGATCTAT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGTTTTCAAAATCTCCATaGGGTCGTCAATACGCACCA +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMFSKSP*GRQYAP
Trigger: TGGTGCGTATTGACGACCCCATGGAGATTTTGAAAA...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCAATGATTGTTACTGTTaGTCATGGGTAAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGNDCYC*SWVKVS
Trigger: TGAAACCTTTACCCATGACCAACAGTAACAATCATT...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCTATTTTGGTCATATCTaGTCTGTTTCCTCATACTAC +
Preference number: 4 (lower is better)
Translates to: SNSRLEKGETIICSANAGYFGHI*SVSSYY
Trigger: GTAGTATGAGGAAACAGACCAGATATGACCAAAATA...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTCAAAATCCTAAGCCTTaGTCTGTCCAAGATGGAGAG +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIQNPKP*SVQDGE
Trigger: CTCTCCATCTTGGACAGACCAAGGCTTAGGATTTTG...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAACTGTGAGACAAAGTTaGGTCATCATGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: NRRFCSVKKAYPKILKETTVRQS*VIMCWG
Trigger: TCCCCAGCACATGATGACCCAACTTTGTCTCACAGT...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTTTCATTCATGTGGCTTaGCTTAAAAGAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACFIHVA*LKRRCF
Trigger: GAAACATCTTCTTTTAAGCCAAGCCACATGAATGAA...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTGCAGGTGGAATAATTTaGGCCATAGGCTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIAGGII*AIGFNS
Trigger: GCTATTGAAGCCTATGGCCCAAATTATTCCACCTGC...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAAAGTTTGTAAAGAAATaGAGGGTGACAGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTKFVKK*RVTVVM
Trigger: CATTACTACTGTCACCCTCCATTTCTTTACAAACTT...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTATAGGCTACAATGAATaGACAGTCATATGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLIGYNE*TVIWFG
Trigger: ACCAAACCATATGACTGTCCATTCATTGTAGCCTAT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTATTTTTAATCCCCTTCTaGGTCTGGCCAAGGGTATAT +
Preference number: 4 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLFLIPF*VWPRVY
Trigger: ATATACCCTTGGCCAGACTCAGAAGGGGATTAAAAA...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTCCTGACTCCATGACATaGGTATCATGCATTTTCACT +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIPDSMT*VSCIFT
Trigger: AGTGAAAATGCATGATACTCATGTCATGGAGTCAGG...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTCCAGTTTTCTTCCCATaGAGAATAGGAACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVPVFFP*RIGTRR
Trigger: TCTTCTTGTTCCTATTCTTCATGGGAAGAAAACTGG...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACACTGCAGATCATGGAGTaGCTAGTGCAATTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NRRFCSVKKAYPKILKETLQIME*LVQFSP
Trigger: AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAG...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTATAGATCTTGTGGACTaGTTTATGTCAGTGACCCAC +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIIDLVD*FMSVTH
Trigger: GTGGGTCACTGACATAAAGCAGTCCACAAGATCTAT...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTGCCGTCTATCAGCCTTaGAAGGGTGAAAGTTATTTT +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIAVYQP*KGESYF
Trigger: AAAATAACTTTCACCCTTGCAAGGCTGATAGACGGC...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGACTAAGATCGTAAGTTaGACTCTCCAAACAGGATTG +
Preference number: 4 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMTKIVS*TLQTGL
Trigger: CAATCCTGTTTGGAGAGTGCAACTTACGATCTTAGT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTACTAAGATCGTAAGTTaGACTCTCCAAACAGGATTG +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVTKIVS*TLQTGL
Trigger: CAATCCTGTTTGGAGAGTGCAACTTACGATCTTAGT...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTTTCATTCATGTGGCTTaGCTTAAAAGAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLFIHVA*LKRRCF
Trigger: GAAACATCTTCTTTTAAGCCAAGCCACATGAATGAA...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAGCAGGTGGAATAATTTaGGCCATAGGCTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: NRRFCSVKKAYPKILKETAGGII*AIGFNS
Trigger: GCTATTGAAGCCTATGGCCCAAATTATTCCACCTGC...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTGTAGTAATGAGACTTTaGGAAAGAGTGCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVVVMRL*ERVLIH
Trigger: ATGAATCAGCACTCTTTCTCAAAGTCTCATTACTAC...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTCCAGTTTTCTTCCCATaGAGAATAGGAACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIPVFFP*RIGTRR
Trigger: TCTTCTTGTTCCTATTCTTCATGGGAAGAAAACTGG...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAAGGCCACATGTTGTTTaGCTATATGAAATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NRRFCSVKKAYPKILKETRPHVV*LYEMSR
Trigger: CCTGGACATTTCATATAGTCAAACAACATGTGGCCT...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR GCA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCACTCATTTACACAGCTaGAAGGCAAACACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LHELLAKDYILGRHQCISTHLHS*KANTGK
Trigger: TTTGCCTGTGTTTGCCTTGCAGCTGTGTAAATGAGT...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525117.5
ENST00000532548.5
CDS-3UTR GCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTGAGAAATGCCAGAAATaGTTTATCCACATCATGTCT +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVEKCQK*FIHIMS
Trigger: AGACATGATGTGGATAAAGCATTTCTGGCATTTCTC...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACACAAAACCGAGATTCATaGCTCCATTTTTACCAAGGG +
Preference number: 4 (lower is better)
Translates to: NRRFCSVKKAYPKILKETQNRDS*LHFYQG
Trigger: CCCTTGGTAAAAATGGAGGCATGAATCTCGGTTTTG...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTAACTACCACCCCACCTTaGCACTTAAATGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLTTTPP*HLNVYL
Trigger: CAAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGT...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTAAATGTGGCAAATCATTaGCCTAATTCTGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLNVANH*PNSVGI
Trigger: GATTCCCACAGAATTAGGCCAATGATTTGCCACATT...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTATAGGCTACAATGAATaGACAGTCATATGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVIGYNE*TVIWFG
Trigger: ACCAAACCATATGACTGTCCATTCATTGTAGCCTAT...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTTATAAAAATGGGTCGTaGGACTTTTCATCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIYKNGS*DFSSVA
Trigger: AGCAACAGATGAAAAGTCTCACGACCCATTTTTATA...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR GCA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTAAATGACAGTTCAATCTaGTTCCACGAGCAGAATTTT +
Preference number: 4 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLNDSSI*FHEQNF
Trigger: AAAATTCTGCTCGTGGAAGCAGATTGAACTGTCATT...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CCA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTAATGATTGTTACTGTTaGTCATGGGTAAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVNDCYC*SWVKVS
Trigger: TGAAACCTTTACCCATGACCAACAGTAACAATCATT...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CCA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTAAGTTTGTAAAGAAATaGAGGGTGACAGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVKFVKK*RVTVVM
Trigger: CATTACTACTGTCACCCTCCATTTCTTTACAAACTT...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR TCA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCAGAAGAACTGAAGGTTaGCTGCATGAATTATTAGCT +
Preference number: 4 (lower is better)
Translates to: LHELLAKDYILGRHQCISRRTEG*LHELLA
Trigger: AGCTAATAATTCATGCAGTCAACCTTCAGTTCTTCT...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525117.5
ENST00000532548.5
CDS GCA 90 bp GGGAAGGTCTGCGATGTCCTGAGTCCAAGGGCTGGAGTCAGTCCCTaGCCTGGTGCTGCTGCTACACTTAGCTCAGCTGGAGCGAGCGGC +
Preference number: 5 (lower is better)
Translates to: GKVCDVLSPRAGVSP*PGAAATLSSAGASG
Trigger: GCCGCTCGCTCCAGCTGAGCTAAGTGTAGCAGCAGCACCAGGGCAGGGACTGACTCCAGCCCTTGGACTCAGGACATCGCAGACCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533276.6
ENST00000533486.5
ENST00000534141.5
CDS TCA 90 bp GATGTGCGAATGAGTCACGCACGCAAGGGAAGGTCTGCGATGTCCTaGGTCCAAGGGCTGGAGTCAGTCCCTGCCCTGGTGCTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: DVRMSHARKGRSAMS*VQGLESVPALVLLL
Trigger: TAGCAGCAGCACCAGGGCAGGGACTGACTCCAGCCCTTGGACTCAGGACATCGCAGACCTTCCCTTGCGTGCGTGACTCATTCGCACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524635.1
ENST00000526205.5
ENST00000527633.6
ENST00000533276.6
ENST00000533486.5
ENST00000534141.5
CDS GCA 90 bp AACAGAAATGGATGTGCGAATGAGTCACGCACGCAAGGGAAGGTCTaGGATGTCCTGAGTCCAAGGGCTGGAGTCAGTCCCTGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: NRNGCANESRTQGKV*DVLSPRAGVSPCPG
Trigger: ACCAGGGCAGGGACTGACTCCAGCCCTTGGACTCAGGACATCGCAGACCTTCCCTTGCGTGCGTGACTCATTCGCACATCCATTTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524635.1
ENST00000526205.5
ENST00000527633.6
ENST00000533276.6
ENST00000533486.5
ENST00000534141.5
CDS-3UTR CAA 90 bp TGTGGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGAGTGCAATTTTCTCCTaGCTCCAACTCCAGACTGGA +
Preference number: 5 (lower is better)
Translates to: CGRGPWPAMLCKLRSPQESAIFS*LQLQTG
Trigger: TCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACT...CTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCATTGTGCTCTGACCTCTaGTCCAAAGGAGTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESLCSDL*SKGVQE
Trigger: TTCTTGGACTCCTTTGGACAAGAGGTCAGAGCACAA...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTGCCAGGTCAATCTTGTaGCCCACTAACACAGTGATG +
Preference number: 5 (lower is better)
Translates to: HRQISPASHGPSGQLLIPARSIL*PTNTVM
Trigger: CATCACTGTGTTAGTGGGCAACAAGATTGACCTGGC...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTCAGCCAGGTCAATCTaGTTGCCCACTAACACAGTG +
Preference number: 5 (lower is better)
Translates to: HRQISPASHGPSGQLLIPSARSI*LPTNTV
Trigger: CACTGTGTTAGTGGGCAACAAGATTGACCTGGCTGA...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: RQISPASHGPSGQLLIPFGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAATTTACACAGCTGGTTaGGGATTTTTCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEIYTAG*GFFSPP
Trigger: GGGTGGGGAGAAAAATCCCAAACCAGCTGTGTAAAT...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527633.6
ENST00000534141.5
CDS-3UTR CAA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCATTGGCCTTCCCAGTTTaGGTTTATCTGGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESLAFPV*VYLVDK
Trigger: CTTGTCTACCAGATAAACCAAAACTGGGAAGGCCAA...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp ATGGACCGACAAAGCAAGTCCAGCATAGGGCATAATGGAGGGCCAGTCTCTTGGAAAGGTGGGATGCACTaGTGGCAGAAGAACGAGGCC +
Preference number: 5 (lower is better)
Translates to: MDRQSKSSIGHNGGPVSWKGGMH*WQKNEA
Trigger: GGCCTCGTTCTTCTGCCACAAGTGCATCCCACCTTT...CCAAGAGACTGGCCCTCCATTATGCCCTATGCTGGACTTGCTTTGTCGGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCCTGGAATTGCCTATaGGGAGAGAGAGAGAGACCA +
Preference number: 5 (lower is better)
Translates to: QGPQMITTEALKKSSHMHPWNCL*GERERP
Trigger: TGGTCTCTCTCTCTCTCCCAATAGGCAATTCCAGGG...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTGCCAGGTCAATCTTGTaGCCCACTAACACAGTGATG +
Preference number: 5 (lower is better)
Translates to: SPDLPSISWPIRAVADSFARSIL*PTNTVM
Trigger: CATCACTGTGTTAGTGGGCAACAAGATTGACCTGGC...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCAGCCAGGTCAATCTaGTTGCCCACTAACACAGTG +
Preference number: 5 (lower is better)
Translates to: SPDLPSISWPIRAVADSFSARSI*LPTNTV
Trigger: CACTGTGTTAGTGGGCAACAAGATTGACCTGGCTGA...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAAAGGGTGAGGATACATaGTTCACAAGTGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESKGEDT*FTSVFC
Trigger: ACAGAACACACTTGTGAACAATGTATCCTCACCCTT...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PDLPSISWPIRAVADSFSGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGAGTGCAATTTTCTCCTaGCTCCAACTCCAGACTGGA +
Preference number: 5 (lower is better)
Translates to: PAMLCKLRSPQESEGQRASAIFS*LQLQTG
Trigger: TCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACT...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTAACTGTGAGACAAAGTaGGGTCATCATGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SPDLPSISWPIRAVADSFNCETK*GHHVLG
Trigger: CCCCAGCACATGATGACCCAACTTTGTCTCACAGTT...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TGTGGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGCACTACCACCCCACCTaGGCACTTAAATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: CGRGPWPAMLCKLRSPQEHYHPT*ALKCLF
Trigger: AAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGTG...CTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTATGGGGTTTCTTTaGGAGGTGATGAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEGMGFL*EVMKVF
Trigger: GAACACTTTCATCACCTCCAAAAGAAACCCCATACC...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTCATTCACTGCTGTATTaGGTGTGGATGTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: HRQISPASHGPSGQLLIPHSLLY*VWMSLQ
Trigger: CTGCAGAGACATCCACACCAAATACAGCAGTGAATG...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533014.5
CDS TCA 90 bp TTCTCTCGTCCTCAGGGGCACTGTGATTTGATGGGTGTGTACAGCTaGGAGAACAGCACAACCGGCTCCAGTGCACAGTCATATCCAATG +
Preference number: 5 (lower is better)
Translates to: FSRPQGHCDLMGVYS*ENSTTGSSAQSYPM
Trigger: CATTGGATATGACTGTGCACTGGAGCCGGTTGTGCTGTTCTCTCAGCTGTACACACCCATCAAATCACAGTGCCCCTGAGGACGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000528379.1
ENST00000530224.5
ENST00000533276.6
ENST00000533486.5
CDS-3UTR CAA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAACACTACCACCCCACCTaGGCACTTAAATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEHYHPT*ALKCLF
Trigger: AAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGTG...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTATGTCAGGACCATGGTaGAGAAAAGTAACCAGTTGC +
Preference number: 5 (lower is better)
Translates to: HRQISPASHGPSGQLLIPMSGPW*RKVTSC
Trigger: GCAACTGGTTACTTTTCTCAACCATGGTCCTGACAT...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGAAAGGTGGGATGCACTaGTGGCAGAAGAACGAGGCC +
Preference number: 5 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVKGGMH*WQKNEA
Trigger: GGCCTCGTTCTTCTGCCACAAGTGCATCCCACCTTT...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCCTGGAATTGCCTATaGGGAGAGAGAGAGAGACCA +
Preference number: 5 (lower is better)
Translates to: DLPSISWPIRAVADSFSSPWNCL*GERERP
Trigger: TGGTCTCTCTCTCTCTCCCAATAGGCAATTCCAGGG...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGGGGAAGAAACGCTTTaGGATGTTGGTAATTATGTA +
Preference number: 5 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESGEETL*DVGNYV
Trigger: TACATAATTACCAACATCCAAAAGCGTTTCTTCCCC...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS TCA 90 bp CTTCCATACTCATTTACACAGCTGCAAGGCAAACACAGGCAAAAGTaGGAAAGGCCCAGTCAGACTTGCCCACAGAGCTCAAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: LPYSFTQLQGKHRQK*ERPSQTCPQSSSCT
Trigger: GGTGCAGCTTGAGCTCTGTGGGCAAGTCTGACTGGGCCTTTCTCACTTTTGCCTGTGTTTGCCTTGCAGCTGTGTAAATGAGTATGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525117.5
ENST00000532548.5
ENST00000534301.5
CDS-3UTR CAA 90 bp CATCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTAACACAGTGATGACCTaGTTGCTGGCATATTGTTCT +
Preference number: 5 (lower is better)
Translates to: HRQISPASHGPSGQLLIPNTVMT*LLAYCS
Trigger: AGAACAATATGCCAGCAACAAGGTCATCACTGTGTT...AGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTCAGAGAGCGAACACAGTGATGACCTaGTTGCTGGCATATTGTTCT +
Preference number: 5 (lower is better)
Translates to: PAMLCKLRSPQESEGQRANTVMT*LLAYCS
Trigger: AGAACAATATGCCAGCAACAAGGTCATCACTGTGTT...CGCTCTCTGACCTTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCGCCAGGTCAATCTTGTaGCCCACTAACACAGTGATG +
Preference number: 5 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLARSIL*PTNTVM
Trigger: CATCACTGTGTTAGTGGGCAACAAGATTGACCTGGC...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTACATCCCAAAGTTCTaGAAAGTGCCTGTGGACAAG +
Preference number: 5 (lower is better)
Translates to: SPDLPSISWPIRAVADSFYIPKF*KVPVDK
Trigger: CTTGTCCACAGGCACTTTCAAGAACTTTGGGATGTA...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCAGAAGGTAGTAATGAGACTTaGAGAAAGAGTGCTGATTCA +
Preference number: 5 (lower is better)
Translates to: RGPWPAMLCKLRSPQESEGSNET*RKSADS
Trigger: TGAATCAGCACTCTTTCTCAAAGTCTCATTACTACC...TTCTGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGTCGAGGCCCTTGGCCTGCCATGCTTTGTAAGCTCAGGAGCCCACAGGAGTCATCATTTTTAGTTTTCTaGCCACTTTACTCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: GRGPWPAMLCKLRSPQESSFLVF*PLYSGR
Trigger: TCTCCCTGAGTAAAGTGGCAAGAAAACTAAAAATGA...TGACTCCTGTGGGCTCCTGAGCTTACAAAGCATGGCAGGCCAAGGGCCTCGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTATGTCAGGACCATGGTaGAGAAAAGTAACCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RQISPASHGPSGQLLIPFMSGPW*RKVTSC
Trigger: GCAACTGGTTACTTTTCTCAACCATGGTCCTGACAT...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGACCAGCCCATCTCTCTaGGGAGTTGGTCTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGTSPSL*GVGLFV
Trigger: CACAAACAGACCAACTCCCAAGAGAGATGGGCTGGT...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCTTGTGCTCTGACCTCTaGTCCAAAGGAGTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: DVTYYQGLCSARSPALQSLCSDL*SKGVQE
Trigger: TTCTTGGACTCCTTTGGACAAGAGGTCAGAGCACAA...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTGGTATGGGGTTTCTTTaGGAGGTGATGAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: SPDLPSISWPIRAVADSFGMGFL*EVMKVF
Trigger: GAACACTTTCATCACCTCCAAAAGAAACCCCATACC...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS GCA 90 bp TTTGATGGGTGTGTACAGCTGAGAGAACAGCACAACCGGCTCCAGTaGACAGTCATATCCAATGGAGCTATCCCAAAAGACAGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: FDGCVQLREQHNRLQ*TVISNGAIPKDSQR
Trigger: TCTCTGGCTGTCTTTTGGGATAGCTCCATTGGATATGACTGTGCACTGGAGCCGGTTGTGCTGTTCTCTCAGCTGTACACACCCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260056.6
ENST00000530224.5
CDS GCA 90 bp TTTGATGGGTGTGTACAGCTGAGAGAACAGCACAACCGGCTCCAGTaGACAGTCATATCCAATGGAGCTGGTTTGGGATTTTTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: FDGCVQLREQHNRLQ*TVISNGAGLGFFSP
Trigger: TGGGGAGAAAAATCCCAAACCAGCTCCATTGGATATGACTGTGCACTGGAGCCGGTTGTGCTGTTCTCTCAGCTGTACACACCCATCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533486.5
CDS-3UTR CAA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTCTTGTTGCTGGCATATaGTTCTATCTCCCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: IKDCALLGALHYSPLIHSLVAGI*FYLPQP
Trigger: TGGCTGCGGGAGATAGAACAATATGCCAGCAACAAG...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCTCAGCCAGGTCAATCTaGTTGCCCACTAACACAGTG +
Preference number: 5 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLSARSI*LPTNTV
Trigger: CACTGTGTTAGTGGGCAACAAGATTGACCTGGCTGA...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: DCALLGALHYSPLIHSILGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTATTTACACAGCTGGTTaGGGATTTTTCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: DLPSISWPIRAVADSFSSIYTAG*GFFSPP
Trigger: GGGTGGGGAGAAAAATCCCAAACCAGCTGTGTAAAT...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000527633.6
ENST00000534141.5
CDS-3UTR CAA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCAACTGTGAGACAAAGTaGGGTCATCATGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLNCETK*GHHVLG
Trigger: CCCCAGCACATGATGACCCAACTTTGTCTCACAGTT...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp ATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTAACTGTGAGACAAAGTaGGGTCATCATGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: IKDCALLGALHYSPLIHSNCETK*GHHVLG
Trigger: CCCCAGCACATGATGACCCAACTTTGTCTCACAGTT...ACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTCCAATCTCCAACCAATaGGATCCTCTCCACATCTTT +
Preference number: 5 (lower is better)
Translates to: PDLPSISWPIRAVADSFSPISNQ*DPLHIF
Trigger: AAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGG...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTCTTAAGGATCTACACTaGGCATCAGACCATTCAAAG +
Preference number: 5 (lower is better)
Translates to: SPDLPSISWPIRAVADSFLKDLH*ASDHSK
Trigger: CTTTGAATGGTCTGATGCCAAGTGTAGATCCTTAAG...AAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CGCCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTACTCTCCAAACAGGATaGCAAGAGGTTCTACGTAAA +
Preference number: 5 (lower is better)
Translates to: RQISPASHGPSGQLLIPFTLQTG*QEVLRK
Trigger: TTTACGTAGAACCTCTTGCAATCCTGTTTGGAGAGT...AAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS GCA 90 bp TTTGATGGGTGTGTACAGCTGAGAGAACAGCACAACCGGCTCCAGTaGACAGTCATATCCAATGGAGTATGTATCAGGTGCTCTGATCTC +
Preference number: 5 (lower is better)
Translates to: FDGCVQLREQHNRLQ*TVISNGVCIRCSDL
Trigger: GAGATCAGAGCACCTGATACATACTCCATTGGATATGACTGTGCACTGGAGCCGGTTGTGCTGTTCTCTCAGCTGTACACACCCATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528379.1
ENST00000533276.6
CDS-3UTR CAA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: RLEKGETIICSANAGLWSGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCTTGGCCTTCCCAGTTTaGGTTTATCTGGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLLAFPV*VYLVDK
Trigger: CTTGTCTACCAGATAAACCAAAACTGGGAAGGCCAA...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCAATCTCCAACCAATaGGATCCTCTCCACATCTTT +
Preference number: 5 (lower is better)
Translates to: DLPSISWPIRAVADSFSSPISNQ*DPLHIF
Trigger: AAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGG...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp ACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTAAAGGTGGGATGCACTaGTGGCAGAAGAACGAGGCC +
Preference number: 5 (lower is better)
Translates to: TPDWKRVKPLYVLLMLACKGGMH*WQKNEA
Trigger: GGCCTCGTTCTTCTGCCACAAGTGCATCCCACCTTT...ACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CAGGGCCCCCAGATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACATATTTTGTTCAAGTTaGTATTCCCTCCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: QGPQMITTEALKKSSHMHIFCSS*YSLPTS
Trigger: GGAAGTGGGGAGGGAATACAAACTTGAACAAAATAT...GTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGGGGGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS CCA 90 bp CCATACTCATTTACACAGCTTTCAATTCCTCCCAGCAATCTTCAGTaGAGGCACAGTATCACTGGCTCTGGGGAAGGTGATAGCTATGTC +
Preference number: 5 (lower is better)
Translates to: PYSFTQLSIPPSNLQ*RHSITGSGEGDSYV
Trigger: GACATAGCTATCACCTTCCCCAGAGCCAGTGATACTGTGCCTCCACTGAAGATTGCTGGGAGGAATTGAAAGCTGTGTAAATGAGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534103.5
CDS-3UTR CAA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCCTTGTTGCTGGCATATaGTTCTATCTCCCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: QKQHALQIMECLVQFSPCLVAGI*FYLPQP
Trigger: TGGCTGCGGGAGATAGAACAATATGCCAGCAACAAG...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTAACACAGTGATGACCTaGTTGCTGGCATATTGTTCT +
Preference number: 5 (lower is better)
Translates to: DLPSISWPIRAVADSFSSNTVMT*LLAYCS
Trigger: AGAACAATATGCCAGCAACAAGGTCATCACTGTGTT...AGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCGCCAGGTCAATCTTGTaGCCCACTAACACAGTGATG +
Preference number: 5 (lower is better)
Translates to: QKQHALQIMECLVQFSPCARSIL*PTNTVM
Trigger: CATCACTGTGTTAGTGGGCAACAAGATTGACCTGGC...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTGCCAGGTCAATCTTGTaGCCCACTAACACAGTGATG +
Preference number: 5 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFARSIL*PTNTVM
Trigger: CATCACTGTGTTAGTGGGCAACAAGATTGACCTGGC...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCTCAGCCAGGTCAATCTaGTTGCCCACTAACACAGTG +
Preference number: 5 (lower is better)
Translates to: KATCSADHGVPSAIFSLLSARSI*LPTNTV
Trigger: CACTGTGTTAGTGGGCAACAAGATTGACCTGGCTGA...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTAAGGGTGAGGATACATaGTTCACAAGTGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: QISPASHGPSGQLLIPFLKGEDT*FTSVFC
Trigger: ACAGAACACACTTGTGAACAATGTATCCTCACCCTT...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCGGCCCATCAGGGCAGTaGCTGATTCCTTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SNSRLEKGETIICSANAGGPSGQ*LIPFLL
Trigger: GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCC...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCACCAGCCCATCTCTCTaGGGAGTTGGTCTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: SNSRLEKGETIICSANAGTSPSL*GVGLFV
Trigger: CACAAACAGACCAACTCCCAAGAGAGATGGGCTGGT...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCCTTAAGGATCTACACTaGGCATCAGACCATTCAAAG +
Preference number: 5 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLLKDLH*ASDHSK
Trigger: CTTTGAATGGTCTGATGCCAAGTGTAGATCCTTAAG...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCGGTATGGGGTTTCTTTaGGAGGTGATGAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: HALQIMECLVQFSPCSNSGMGFL*EVMKVF
Trigger: GAACACTTTCATCACCTCCAAAAGAAACCCCATACC...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACATCCAATGGAGCTGGTTaGGGATTTTTCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTSNGAG*GFFSPP
Trigger: GGGTGGGGAGAAAAATCCCAAACCAGCTCCATTGGA...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533486.5
CDS-3UTR CAA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGAACACAGTGATGACCTaGTTGCTGGCATATTGTTCT +
Preference number: 5 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGNTVMT*LLAYCS
Trigger: AGAACAATATGCCAGCAACAAGGTCATCACTGTGTT...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAACACAGTGATGACCTaGTTGCTGGCATATTGTTCT +
Preference number: 5 (lower is better)
Translates to: HALQIMECLVQFSPCSNSNTVMT*LLAYCS
Trigger: AGAACAATATGCCAGCAACAAGGTCATCACTGTGTT...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCAACACAGTGATGACCTaGTTGCTGGCATATTGTTCT +
Preference number: 5 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLNTVMT*LLAYCS
Trigger: AGAACAATATGCCAGCAACAAGGTCATCACTGTGTT...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CTTTCATGGCCATCCAACTTCTTCCCTAGAGCCTACATTGATAGAAAATGTTTTAAGGCCCAGTCAGACTaGCCCACAGAGCTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: LSWPSNFFPRAYIDRKCFKAQSD*PTELKL
Trigger: CAGCTTGAGCTCTGTGGGCAAGTCTGACTGGGCCTT...AAAACATTTTCTATCAATGTAGGCTCTAGGGAAGAAGTTGGATGGCCATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525117.5
CDS-3UTR CAA 90 bp ATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTTTGGCCTTCCCAGTTTaGGTTTATCTGGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: MECLVQFSPCSNSRLEKGLAFPV*VYLVDK
Trigger: CTTGTCTACCAGATAAACCAAAACTGGGAAGGCCAA...ACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GATGTGACCTACTATCAAGGACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCAATGTACTAAAACGTTaGGTCTGTGAAATAGCGGAA +
Preference number: 5 (lower is better)
Translates to: DVTYYQGLCSARSPALQSNVLKR*VCEIAE
Trigger: TTCCGCTATTTCACAGACCAAACGTTTTAGTACATT...GGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTCCTTGATAGTAGGTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCACACCTCCATTTGAATaGGAGATTTGCAGTAACACA +
Preference number: 5 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLTPPFE*EICSNT
Trigger: TGTGTTACTGCAAATCTCCAATTCAAATGGAGGTGT...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCCACTACCACCCCACCTaGGCACTTAAATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: HALQIMECLVQFSPCSNSHYHPT*ALKCLF
Trigger: AAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGTG...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTAAAGTCTCAGCTAATTaGTGGCATACTAGAACTCCT +
Preference number: 5 (lower is better)
Translates to: QISPASHGPSGQLLIPFLKVSAN*WHTRTP
Trigger: AGGAGTTCTAGTATGCCACAAATTAGCTGAGACTTT...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCCTTAAGGATCTACACTaGGCATCAGACCATTCAAAG +
Preference number: 5 (lower is better)
Translates to: HALQIMECLVQFSPCSNSLKDLH*ASDHSK
Trigger: CTTTGAATGGTCTGATGCCAAGTGTAGATCCTTAAG...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CCAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTAGAAAGAGGTTTAAATaGCTCTGTGAGGTATTTCAG +
Preference number: 5 (lower is better)
Translates to: PDLPSISWPIRAVADSFSRKRFK*LCEVFQ
Trigger: CTGAAATACCTCACAGAGCAATTTAAACCTCTTTCT...AGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CAGATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTGGGGAAGAAACGCTTTaGGATGTTGGTAATTATGTA +
Preference number: 5 (lower is better)
Translates to: QISPASHGPSGQLLIPFLGEETL*DVGNYV
Trigger: TACATAATTACCAACATCCAAAAGCGTTTCTTCCCC...AAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS TCA 90 bp AATGGAGTATGTATCAGGTGCTCTGATCTCATTTCATCCTCACTGTaGGATGGGAACTGTAAACTGGTTTGGGATTTTTCTCCCCACCCC +
Preference number: 5 (lower is better)
Translates to: NGVCIRCSDLISSSL*DGNCKLVWDFSPHP
Trigger: GGGGTGGGGAGAAAAATCCCAAACCAGTTTACAGTTCCCATCTCACAGTGAGGATGAAATGAGATCAGAGCACCTGATACATACTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533276.6
CDS-3UTR CAA 90 bp GACTGTGCTCTGCTAGGAGCCCTGCACTACAGTCCATTAATCCACAGTATTTTGAAGGGTGAGGATACATaGTTCACAAGTGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: DCALLGALHYSPLIHSILKGEDT*FTSVFC
Trigger: ACAGAACACACTTGTGAACAATGTATCCTCACCCTT...CAAAATACTGTGGATTAATGGACTGTAGTGCAGGGCTCCTAGCAGAGCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAAGTGCAATTTTCTCCTaGCTCCAACTCCAGACTGGA +
Preference number: 5 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTSAIFS*LQLQTG
Trigger: TCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACT...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp ATCTCCCCAGCATCTCATGGCCCATCAGGGCAGTTGCTGATTCCTTTTCTTCTCAATGTACTAAAACGTTaGGTCTGTGAAATAGCGGAA +
Preference number: 5 (lower is better)
Translates to: ISPASHGPSGQLLIPFLLNVLKR*VCEIAE
Trigger: TTCCGCTATTTCACAGACCAAACGTTTTAGTACATT...GAGAAGAAAAGGAATCAGCAACTGCCCTGATGGGCCATGAGATGCTGGGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCGGTAGTAATGAGACTTaGAGAAAGAGTGCTGATTCA +
Preference number: 5 (lower is better)
Translates to: HALQIMECLVQFSPCSNSGSNET*RKSADS
Trigger: TGAATCAGCACTCTTTCTCAAAGTCTCATTACTACC...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GATGATTACCACCGAAGCCCTAAAGAAGAGTTCCCACATGCACCCACTGATGTGATATCAGAACTGAGATaGTCACCATCTACAGCAACA +
Preference number: 5 (lower is better)
Translates to: DDYHRSPKEEFPHAPTDVISELR*SPSTAT
Trigger: TGTTGCTGTAGATGGTGACAATCTCAGTTCTGATAT...CACATCAGTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGATATCAGAACTGAGATaGTCACCATCTACAGCAACA +
Preference number: 5 (lower is better)
Translates to: HGVPSAIFSLLQLQTGKGISELR*SPSTAT
Trigger: TGTTGCTGTAGATGGTGACAATCTCAGTTCTGATAT...CCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTTTGTGCTCTGACCTCTaGTCCAAAGGAGTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: SPCSNSRLEKGETIICSALCSDL*SKGVQE
Trigger: TTCTTGGACTCCTTTGGACAAGAGGTCAGAGCACAA...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TGTCAAAGTCAGCAACCACCACCGATTCCGTCAGGAACTAGAACACAGCATCTCATATTTTGTTCAAGTTaGTATTCCCTCCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: CQSQQPPPIPSGTRTQHLIFCSS*YSLPTS
Trigger: GGAAGTGGGGAGGGAATACAAACTTGAACAAAATAT...GAGATGCTGTGTTCTAGTTCCTGACGGAATCGGTGGTGGTTGCTGACTTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AAACAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTAGTGCAATTTTCTCCTaGCTCCAACTCCAGACTGGA +
Preference number: 5 (lower is better)
Translates to: KQKQHALQIMECLVQFSPSAIFS*LQLQTG
Trigger: TCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACT...AGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCAAGGCCCAGTCAGACTaGCCCACAGAGCTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: LHELLAKDYILGRHQCISKAQSD*PTELKL
Trigger: CAGCTTGAGCTCTGTGGGCAAGTCTGACTGGGCCTT...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525117.5
ENST00000532548.5
CDS-3UTR CAA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCTACATCCCAAAGTTCTaGAAAGTGCCTGTGGACAAG +
Preference number: 5 (lower is better)
Translates to: SNSRLEKGETIICSANAGYIPKF*KVPVDK
Trigger: CTTGTCCACAGGCACTTTCAAGAACTTTGGGATGTA...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCTCATTTTTAGTTTTCTaGCCACTTTACTCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: HALQIMECLVQFSPCSNSSFLVF*PLYSGR
Trigger: TCTCCCTGAGTAAAGTGGCAAGAAAACTAAAAATGA...GGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTATGTCAGGACCATGGTaGAGAAAAGTAACCAGTTGC +
Preference number: 5 (lower is better)
Translates to: SPCSNSRLEKGETIICSAMSGPW*RKVTSC
Trigger: GCAACTGGTTACTTTTCTCAACCATGGTCCTGACAT...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGACCAGCCCATCTCTCTaGGGAGTTGGTCTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMTSPSL*GVGLFV
Trigger: CACAAACAGACCAACTCCCAAGAGAGATGGGCTGGT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGTGGCAGCAGCAGATTaGAGCCAACAGATTATGAAA +
Preference number: 5 (lower is better)
Translates to: PCSNSRLEKGETIICSANVAAAD*SQQIMK
Trigger: TTTCATAATCTGTTGGCTCAAATCTGCTGCTGCCAC...ATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260056.6
CDS-3UTR CAA 90 bp AGCAGCTCACATAACTTTCATGGCCATCCAACTTCTTCCCTAGAGCCTACATTGAAACAAACTACAGCATaGCCCTTAGCAGATTCTTTC +
Preference number: 5 (lower is better)
Translates to: SSSHNFHGHPTSSLEPTLKQTTA*PLADSF
Trigger: GAAAGAATCTGCTAAGGGCAATGCTGTAGTTTGTTT...CAATGTAGGCTCTAGGGAAGAAGTTGGATGGCCATGAAAGTTATGTGAGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525117.5
CDS-3UTR CAA 90 bp GAGTGCCTAGTGCAATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAAATGTACTAAAACGTTaGGTCTGTGAAATAGCGGAA +
Preference number: 5 (lower is better)
Translates to: ECLVQFSPCSNSRLEKGENVLKR*VCEIAE
Trigger: TTCCGCTATTTCACAGACCAAACGTTTTAGTACATT...TTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACTAGGCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGGGTAGTAATGAGACTTaGAGAAAGAGTGCTGATTCA +
Preference number: 5 (lower is better)
Translates to: RLEKGETIICSANAGLWSGSNET*RKSADS
Trigger: TGAATCAGCACTCTTTCTCAAAGTCTCATTACTACC...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CTTGCAACTGTGAGACAAAGTTGGGTCATCATGTGCTGGGGACACTGGATTTTTGGTAGTAATGAGACTTaGAGAAAGAGTGCTGATTCA +
Preference number: 5 (lower is better)
Translates to: LATVRQSWVIMCWGHWIFGSNET*RKSADS
Trigger: TGAATCAGCACTCTTTCTCAAAGTCTCATTACTACC...AAAAATCCAGTGTCCCCAGCACATGATGACCCAACTTTGTCTCACAGTTGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CAAAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCAAAGTCTCAGCTAATTaGTGGCATACTAGAACTCCT +
Preference number: 5 (lower is better)
Translates to: QKQHALQIMECLVQFSPCKVSAN*WHTRTP
Trigger: AGGAGTTCTAGTATGCCACAAATTAGCTGAGACTTT...GCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTCCCTGGAATTGCCTATaGGGAGAGAGAGAGAGACCA +
Preference number: 5 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIPWNCL*GERERP
Trigger: TGGTCTCTCTCTCTCTCCCAATAGGCAATTCCAGGG...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCCTGTGGTCGATATTTTGTTCAAGTTaGTATTCCCTCCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: RLEKGETIICSANAGLWSIFCSS*YSLPTS
Trigger: GGAAGTGGGGAGGGAATACAAACTTGAACAAAATAT...CGACCACAGGCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAACTCTCCAAACAGGATaGCAAGAGGTTCTACGTAAA +
Preference number: 5 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTTLQTG*QEVLRK
Trigger: TTTACGTAGAACCTCTTGCAATCCTGTTTGGAGAGT...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS TCA 90 bp AATGGAGTATGTATCAGGTGCTCTGATCTCATTTCATCCTCACTGTaGGATGGGAACTGTAAACTTTCAATTCCTCCCAGCAATCTTCAG +
Preference number: 5 (lower is better)
Translates to: NGVCIRCSDLISSSL*DGNCKLSIPPSNLQ
Trigger: CTGAAGATTGCTGGGAGGAATTGAAAGTTTACAGTTCCCATCTCACAGTGAGGATGAAATGAGATCAGAGCACCTGATACATACTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528379.1
CDS-3UTR CAA 90 bp TCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAATGCTGGCGGAAGAAAATCCATTTaGCACTCAGTAAATCCTTCC +
Preference number: 5 (lower is better)
Translates to: SNSRLEKGETIICSANAGGRKSI*HSVNPS
Trigger: GGAAGGATTTACTGAGTGCAAAATGGATTTTCTTCC...GCCAGCATTAGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260056.6
CDS-3UTR CAA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTAAGGGTGAGGATACATaGTTCACAAGTGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLKGEDT*FTSVFC
Trigger: ACAGAACACACTTGTGAACAATGTATCCTCACCCTT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCAATGTACTAAAACGTTaGGTCTGTGAAATAGCGGAA +
Preference number: 5 (lower is better)
Translates to: KATCSADHGVPSAIFSLLNVLKR*VCEIAE
Trigger: TTCCGCTATTTCACAGACCAAACGTTTTAGTACATT...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AAAGCAACATGCTCTGCAGATCATGGAGTGCCTAGTGCAATTTTCTCCTTGCTCAGAAAGAGGTTTAAATaGCTCTGTGAGGTATTTCAG +
Preference number: 5 (lower is better)
Translates to: KATCSADHGVPSAIFSLLRKRFK*LCEVFQ
Trigger: CTGAAATACCTCACAGAGCAATTTAAACCTCTTTCT...GAGCAAGGAGAAAATTGCACTAGGCACTCCATGATCTGCAGAGCATGTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GCTCCCTTATATACTATCAAAGGAGCTCCAACCATCTGGTATGTCTGGAAGACAGGGGAAGAAACGCTTTaGGATGTTGGTAATTATGTA +
Preference number: 5 (lower is better)
Translates to: APLYTIKGAPTIWYVWKTGEETL*DVGNYV
Trigger: TACATAATTACCAACATCCAAAAGCGTTTCTTCCCC...TGTCTTCCAGACATACCAGATGGTTGGAGCTCCTTTGATAGTATATAAGGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCCTTGTTGCTGGCATATaGTTCTATCTCCCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LHELLAKDYILGRHQCISLVAGI*FYLPQP
Trigger: TGGCTGCGGGAGATAGAACAATATGCCAGCAACAAG...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525117.5
ENST00000532548.5
CDS-3UTR CAA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTAGTGCAATTTTCTCCTaGCTCCAACTCCAGACTGGA +
Preference number: 5 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAISAIFS*LQLQTG
Trigger: TCCAGTCTGGAGTTGGAGCAAGGAGAAAATTGCACT...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTACACCTCCATTTGAATaGGAGATTTGCAGTAACACA +
Preference number: 5 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLTPPFE*EICSNT
Trigger: TGTGTTACTGCAAATCTCCAATTCAAATGGAGGTGT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTATATCAGAACTGAGATaGTCACCATCTACAGCAACA +
Preference number: 5 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLISELR*SPSTAT
Trigger: TGTTGCTGTAGATGGTGACAATCTCAGTTCTGATAT...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp TCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTCTGCTAGAAAGAGGTTTAAATaGCTCTGTGAGGTATTTCAG +
Preference number: 5 (lower is better)
Translates to: SPCSNSRLEKGETIICSARKRFK*LCEVFQ
Trigger: CTGAAATACCTCACAGAGCAATTTAAACCTCTTTCT...AGCAGAACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTATACATCCCAAAGTTCTaGAAAGTGCCTGTGGACAAG +
Preference number: 5 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLYIPKF*KVPVDK
Trigger: CTTGTCCACAGGCACTTTCAAGAACTTTGGGATGTA...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AACCCTGGTGGTCTTAGTAGACCGAGCCAAATTAAACTATATGATAAAGCAATTTACATCCCAAAGTTCTaGAAAGTGCCTGTGGACAAG +
Preference number: 5 (lower is better)
Translates to: NPGGLSRPSQIKLYDKAIYIPKF*KVPVDK
Trigger: CTTGTCCACAGGCACTTTCAAGAACTTTGGGATGTA...AATTGCTTTATCATATAGTTTAATTTGGCTCGGTCTACTAAGACCACCAGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGTTTTCAGCTAATTGGACTCGGGTCATCAGTGGGTTATATTTCTAACAGGCTTTCATTTTTAGTTTTCTaGCCACTTTACTCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: GFQLIGLGSSVGYISNRLSFLVF*PLYSGR
Trigger: TCTCCCTGAGTAAAGTGGCAAGAAAACTAAAAATGA...AAGCCTGTTAGAAATATAACCCACTGATGACCCGAGTCCAATTAGCTGAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTACCAATCTCCAACCAATaGGATCCTCTCCACATCTTT +
Preference number: 5 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLPISNQ*DPLHIF
Trigger: AAAGATGTGGAGAGGATCCAATTGGTTGGAGATTGG...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AGCAACTTTATTTTCAACACACTTGCAACTGTGAGACAAAGTTGGGTCATCATGACTCTCCAAACAGGATaGCAAGAGGTTCTACGTAAA +
Preference number: 5 (lower is better)
Translates to: SNFIFNTLATVRQSWVIMTLQTG*QEVLRK
Trigger: TTTACGTAGAACCTCTTGCAATCCTGTTTGGAGAGT...CATGATGACCCAACTTTGTCTCACAGTTGCAAGTGTGTTGAAAATAAAGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTAAAGGGTGAGGATACATaGTTCACAAGTGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLKGEDT*FTSVFC
Trigger: ACAGAACACACTTGTGAACAATGTATCCTCACCCTT...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CAGCAACAGTGGAATTACACATCATATCCTTATTCCATTACTCATCCCTCAGTTACACCTCCATTTGAATaGGAGATTTGCAGTAACACA +
Preference number: 5 (lower is better)
Translates to: QQQWNYTSYPYSITHPSVTPPFE*EICSNT
Trigger: TGTGTTACTGCAAATCTCCAATTCAAATGGAGGTGT...AACTGAGGGATGAGTAATGGAATAAGGATATGATGTGTAATTCCACTGTTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS-3UTR CAA 90 bp GGAATAATTTGGGCCATAGGCTTCAATAGCAAAAATTGCTTACAGTTACCTCTACACTACCACCCCACCTaGGCACTTAAATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: GIIWAIGFNSKNCLQLPLHYHPT*ALKCLF
Trigger: AAATAAACATTTAAGTGCCAAGGTGGGGTGGTAGTG...TAGAGGTAACTGTAAGCAATTTTTGCTATTGAAGCCTATGGCCCAAATTATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp AATTTTCTCCTTGCTCCAACTCCAGACTGGAAAAGGGTGAAACCATTATATGTTAAAGTCTCAGCTAATTaGTGGCATACTAGAACTCCT +
Preference number: 5 (lower is better)
Translates to: NFLLAPTPDWKRVKPLYVKVSAN*WHTRTP
Trigger: AGGAGTTCTAGTATGCCACAAATTAGCTGAGACTTT...AACATATAATGGTTTCACCCTTTTCCAGTCTGGAGTTGGAGCAAGGAGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS-3UTR CAA 90 bp CTGCATGAATTATTAGCTAAAGACTATATTCTTGGAAGGCACCAATGTATAAGCAACACAGTGATGACCTaGTTGCTGGCATATTGTTCT +
Preference number: 5 (lower is better)
Translates to: LHELLAKDYILGRHQCISNTVMT*LLAYCS
Trigger: AGAACAATATGCCAGCAACAAGGTCATCACTGTGTT...GCTTATACATTGGTGCCTTCCAAGAATATAGTCTTTAGCTAATAATTCATGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525117.5
ENST00000532548.5
CDS-3UTR CAA 90 bp CTTTCATGGCCATCCAACTTCTTCCCTAGAGCCTACATTGATAGAAAATGTTTTTCCCTAGAGCCTACATaGATAGAAAATGTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: LSWPSNFFPRAYIDRKCFSLEPT*IENVFY
Trigger: GTAGAAAACATTTTCTATCAATGTAGGCTCTAGGGA...AAAACATTTTCTATCAATGTAGGCTCTAGGGAAGAAGTTGGATGGCCATGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000525117.5
CDS-3UTR CAA 90 bp AACAGAAGATTCTGCTCTGTTAAAAAGGCCTATCCTAAAATCTTGAAAGAGACAACACCTCCATTTGAATaGGAGATTTGCAGTAACACA +
Preference number: 5 (lower is better)
Translates to: NRRFCSVKKAYPKILKETTPPFE*EICSNT
Trigger: TGTGTTACTGCAAATCTCCAATTCAAATGGAGGTGT...TGTCTCTTTCAAGATTTTAGGATAGGCCTTTTTAACAGAGCAGAATCTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527633.6
ENST00000533486.5
ENST00000612684.4
CDS CCA 72 bp GCAAGGGAAGGTCTGCGATGTCCTGAGTCCAAGGGCTaGAGTCAGTCCCTGCCCTGGTGCTGCTGCTACACT +
Preference number: 6 (lower is better)
Translates to: AREGLRCPESKG*SQSLPWCCCYT
Trigger: AGTGTAGCAGCAGCACCAGGGCAGGGACTGACTCCAGCCCTTGGACTCAGGACATCGCAGACCTTCCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524635.1
ENST00000526205.5
ENST00000527633.6
ENST00000533276.6
ENST00000533486.5
ENST00000534141.5
CDS GCA 72 bp TGCGATGTCCTGAGTCCAAGGGCTGGAGTCAGTCCCTaGCCTGGTGCTGCTGCTACACTTAGCTCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: CDVLSPRAGVSP*PGAAATLSSAG
Trigger: TCCAGCTGAGCTAAGTGTAGCAGCAGCACCAGGGCAGGGACTGACTCCAGCCCTTGGACTCAGGACATCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527633.6
ENST00000533276.6
ENST00000533486.5
ENST00000534141.5
CDS GCA 72 bp GGATGTGCGAATGAGTCACGCACGCAAGGGAAGGTCTaGGATGTCCTGAGTCCAAGGGCTGGAGTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: GCANESRTQGKV*DVLSPRAGVSP
Trigger: GGGACTGACTCCAGCCCTTGGACTCAGGACATCGCAGACCTTCCCTTGCGTGCGTGACTCATTCGCACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524635.1
ENST00000526205.5
ENST00000527633.6
ENST00000533276.6
ENST00000533486.5
ENST00000534141.5
CDS TCA 72 bp CCTCAGGGGCACTGTGATTTGATGGGTGTGTACAGCTaGGAGAACAGCACAACCGGCTCCAGTGCACAGTCA +
Preference number: 6 (lower is better)
Translates to: PQGHCDLMGVYS*ENSTTGSSAQS
Trigger: TGACTGTGCACTGGAGCCGGTTGTGCTGTTCTCTCAGCTGTACACACCCATCAAATCACAGTGCCCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000528379.1
ENST00000530224.5
ENST00000533276.6
ENST00000533486.5
CDS TCA 72 bp CCCCACCCCAGGCATAAACAGAAATGGATGTGCGAATaGGTCACGCACGCAAGGGAAGGTCTGCGATGTCCT +
Preference number: 6 (lower is better)
Translates to: PHPRHKQKWMCE*VTHAREGLRCP
Trigger: AGGACATCGCAGACCTTCCCTTGCGTGCGTGACTCATTCGCACATCCATTTCTGTTTATGCCTGGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000524635.1
ENST00000526205.5
ENST00000527633.6
ENST00000533276.6
ENST00000533486.5
ENST00000534141.5
CDS TCA 72 bp ACCTTCCCATGCACCATGGACTCAGTTGTCCCGACATaGGTGAAGGAGAAGGCCACCACCATGATCCAGAGA +
Preference number: 6 (lower is better)
Translates to: TFPCTMDSVVPT*VKEKATTMIQR
Trigger: TCTCTGGATCATGGTGGTGGCCTTCTCCTTCACTCATGTCGGGACAACTGAGTCCATGGTGCATGGGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528379.1
ENST00000534103.5
CDS GCA 72 bp CAAAGATTGCTGAGCAAGAGCCCTCAGCCAGGCTATTaGCTACCTTCAATTTTCTCTCGTCCTCAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: QRLLSKSPQPGY*LPSIFSRPQGH
Trigger: GTGCCCCTGAGGACGAGAGAAAATTGAAGGTAGGCAATAGCCTGGCTGAGGGCTCTTGCTCAGCAATCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531021.5
CDS CAA 72 bp ACAAAGATTGCTGAGCAAGAGCCCTCAGCCAGGCTATaGCCTACCTTCAATTTTCTCTCGTCCTCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: TKIAEQEPSARL*PTFNFLSSSGA
Trigger: TGCCCCTGAGGACGAGAGAAAATTGAAGGTAGGCAATAGCCTGGCTGAGGGCTCTTGCTCAGCAATCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531021.5
CDS TCA 72 bp CTTCAATTTTCTCTCGTCCTCAGGGGCACTGTGATTTaGTGGGTGTGTACAGCTGAGAGAACAGCACAACCG +
Preference number: 6 (lower is better)
Translates to: LQFSLVLRGTVI*WVCTAERTAQP
Trigger: CGGTTGTGCTGTTCTCTCAGCTGTACACACCCATCAAATCACAGTGCCCCTGAGGACGAGAGAAAATTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000528379.1
ENST00000530224.5
ENST00000533276.6
ENST00000533486.5
CDS TCA 72 bp CACAGCTTCAATTTTCTCTCGTCCTCAGGGGCACTGTaGTTTGATGGGTGTGTACAGCTGAGAGAACAGCAC +
Preference number: 6 (lower is better)
Translates to: HSFNFLSSSGAL*FDGCVQLREQH
Trigger: GTGCTGTTCTCTCAGCTGTACACACCCATCAAATCACAGTGCCCCTGAGGACGAGAGAAAATTGAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260056.6
ENST00000528379.1
ENST00000530224.5
ENST00000533276.6
ENST00000533486.5
CDS GCA 72 bp TGTGTACAGCTGAGAGAACAGCACAACCGGCTCCAGTaGACAGTCATATCCAATGGAGCTATCCCAAAAGAC +
Preference number: 6 (lower is better)
Translates to: CVQLREQHNRLQ*TVISNGAIPKD
Trigger: GTCTTTTGGGATAGCTCCATTGGATATGACTGTGCACTGGAGCCGGTTGTGCTGTTCTCTCAGCTGTACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260056.6
ENST00000530224.5
CDS GCA 72 bp TGTGTACAGCTGAGAGAACAGCACAACCGGCTCCAGTaGACAGTCATATCCAATGGAGTATGTATCAGGTGC +
Preference number: 6 (lower is better)
Translates to: CVQLREQHNRLQ*TVISNGVCIRC
Trigger: GCACCTGATACATACTCCATTGGATATGACTGTGCACTGGAGCCGGTTGTGCTGTTCTCTCAGCTGTACACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528379.1
ENST00000533276.6
CDS CCA 72 bp TTTACACAGCTTTCAATTCCTCCCAGCAATCTTCAGTaGAGGCACAGTATCACTGGCTCTGGGGAAGGTGAT +
Preference number: 6 (lower is better)
Translates to: FTQLSIPPSNLQ*RHSITGSGEGD
Trigger: ATCACCTTCCCCAGAGCCAGTGATACTGTGCCTCCACTGAAGATTGCTGGGAGGAATTGAAAGCTGTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534103.5
CDS CAA 72 bp GTTAGCCCTTACTTACCCACTAACACAGTGATGACCTaGTTGCTGGCATATTGTTCTATCTCCCGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VSPYLPTNTVMT*LLAYCSISRSH
Trigger: GTGGCTGCGGGAGATAGAACAATATGCCAGCAACAAGGTCATCACTGTGTTAGTGGGTAAGTAAGGGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525117.5
ENST00000532548.5
CDS CCA 72 bp AACTGTAAACTTTCAATTCCTCCCAGCAATCTTCAGTaGAGGCACAGTATCACTGGCTCTGGGGAAGGTGAT +
Preference number: 6 (lower is better)
Translates to: NCKLSIPPSNLQ*RHSITGSGEGD
Trigger: ATCACCTTCCCCAGAGCCAGTGATACTGTGCCTCCACTGAAGATTGCTGGGAGGAATTGAAAGTTTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528379.1
CDS CCA 72 bp ACAGCACAACCGGCTCCAGTGCACAGTCATATCCAATaGAGCTATCCCAAAAGACAGCCAGAGAATTTTAAT +
Preference number: 6 (lower is better)
Translates to: TAQPAPVHSHIQ*SYPKRQPENFN
Trigger: ATTAAAATTCTCTGGCTGTCTTTTGGGATAGCTCCATTGGATATGACTGTGCACTGGAGCCGGTTGTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260056.6
ENST00000530224.5
CDS TCA 72 bp TGTATCAGGTGCTCTGATCTCATTTCATCCTCACTGTaGGATGGGAACTGTAAACTTTCAATTCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: CIRCSDLISSSL*DGNCKLSIPPS
Trigger: GCTGGGAGGAATTGAAAGTTTACAGTTCCCATCTCACAGTGAGGATGAAATGAGATCAGAGCACCTGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528379.1
CDS TCA 72 bp CACAGTCATATCCAATGGAGTATGTATCAGGTGCTCTaGTCTCATTTCATCCTCACTGTGAGATGGGAACTG +
Preference number: 6 (lower is better)
Translates to: HSHIQWSMYQVL*SHFILTVRWEL
Trigger: CAGTTCCCATCTCACAGTGAGGATGAAATGAGATCAGAGCACCTGATACATACTCCATTGGATATGACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528379.1
ENST00000533276.6
CDS CCA 72 bp AGTCAAGGAAGAGTTTCTCCACATTATCAGATTCCTTaGCTGAGGTCTCCAGATAATACATGTCCTGAGCTT +
Preference number: 6 (lower is better)
Translates to: SQGRVSPHYQIP*LRSPDNTCPEL
Trigger: AAGCTCAGGACATGTATTATCTGGAGACCTCAGCCAAGGAATCTGATAATGTGGAGAAACTCTTCCTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260056.6
ENST00000527633.6
ENST00000531021.5
ENST00000533014.5
ENST00000533486.5
ENST00000534141.5
ENST00000612684.4
CDS TCA 72 bp TGTATCAGGTGCTCTGATCTCATTTCATCCTCACTGTaGGATGGGAACTGTAAACTGGTTTGGGATTTTTCT +
Preference number: 6 (lower is better)
Translates to: CIRCSDLISSSL*DGNCKLVWDFS
Trigger: AGAAAAATCCCAAACCAGTTTACAGTTCCCATCTCACAGTGAGGATGAAATGAGATCAGAGCACCTGATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533276.6