Pregenerated sensors for RAB2B (Homo sapiens)
Ensembl gene IDs: ENSG00000129472Ensembl transcript IDs: ENST00000397762.6, ENST00000417141.5, ENST00000461909.1, ENST00000475857.1, ENST00000485996.1, ENST00000649801.1
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTACCCACTTATGTGACTGCTTACTAGCAGGCAGCCTTACTGTATaGCTCATGGAATGGAGGCAAAAAGCCAGGGAAAGGTGGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: GTHLCDCLLAGSLTV*LMEWRQKARERWEG Trigger: CCCCTCCCACCTTTCCCTGGCTTTTTGCCTCCATTCCATGAGGCATACAGTAAGGCTGCCTGCTAGTAAGCAGTCACATAAGTGGGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR CCA 90 bp | TTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTaGGGCCCAATCTTGATGCCATTTGCCTCATTGTGGACATCAAAT | + |
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Preference number: 1 (lower is better) Translates to: FRWEALGPTDVEIDC*GPILMPFASLWTSN Trigger: ATTTGATGTCCACAATGAGGCAAATGGCATCAAGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR GCA 90 bp | GAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTaGAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: EAEDLSTKGQLDLGN*KCSNRMSLTLILSG Trigger: CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| 3UTR-3UTR TCA 90 bp | ATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACGTTGGGGCCCAATCTTaGTGCCATTTGCCTCATTGT | + |
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Preference number: 2 (lower is better) Translates to: MSREFRWEALGPTDVEIDVGAQS*CHLPHC Trigger: ACAATGAGGCAAATGGCATCAAGATTGGGCCCCAAC...GTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAAGCAGGCTGTTTTGGCTaGAGTTTCCATGAATATAAG | + |
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Preference number: 2 (lower is better) Translates to: TLCHESSAGRHWVPLMLKAGCFG*SFHEYK Trigger: CTTATATTCATGGAAACTTCAGCCAAAACAGCCTGC...TTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGCCCAATCTATGAATATAAGTCCATaGTCCCTAGCAAAGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGRHWVPLMLKLTVGAQSMNISP*SLAKAS Trigger: AGAGGCCTTTGCTAGGGAGCATGGACTTATATTCAT...AGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR-3UTR GCA 90 bp | GAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAGGAAAAAGGCAGCCTTACTGTATaGCTCATGGAATGGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: EKFVRPQGCGRERDIKEKGSLTV*LMEWRQ Trigger: TTGCCTCCATTCCATGAGGCATACAGTAAGGCTGCC...TTTTTCCTTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR-3UTR GCA 90 bp | GAAATTGACTGTTGGGGCCCAATCTTGATGCCATTTGCCTCATTGTGGACATCAAGGCCTCTTCAACATTaGAGGCTGTTTTGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: EIDCWGPILMPFASLWTSRPLQH*RLFWLK Trigger: CTTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCT...TGATGTCCACAATGAGGCAAATGGCATCAAGATTGGGCCCCAACAGTCAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGAATGCCCAAATTCTCTCCTaGTCTTTAGGTGGAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: REVLSALGQVEETAFYKNAQILS*SLGGKA Trigger: TGCCTTTCCACCTAAAGACCAGGAGAGAATTTGGGC...ATTCTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGAATCTCCTGGTCTTTAGGTaGAAAGGCAAAACATCACAC | + |
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Preference number: 2 (lower is better) Translates to: REVLSALGQVEETAFYKNLLVFR*KGKTSH Trigger: GTGTGATGTTTTGCCTTTCCACCTAAAGACCAGGAG...ATTCTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR-3UTR CCA 90 bp | GAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAGGAAAAATTAGGTAATAATAAGTaGCCACATGTCCCTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: EKFVRPQGCGRERDIKEKLGNNK*PHVPDQ Trigger: TTGGTCAGGGACATGTGGCCACTTATTATTACCTAA...TTTTTCCTTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR CAA 90 bp | GGCCAACTAGATCTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTaGACCCTAATTCTTAGTGGGAAGTGGATTGTATATGCTTACGAA | + |
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Preference number: 2 (lower is better) Translates to: GQLDLGNCKCSNRMS*TLILSGKWIVYAYE Trigger: TTCGTAAGCATATACAATCCACTTCCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATCTAGTTGGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| 3UTR-3UTR TCA 90 bp | TGCAAAGGTATGGAACTAGGAATAAATATGTCACATTCAGTAAGTAGATTAGCCTTAAGCCTATTGATCTaGAGCTATTCCAGGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: CKGMELGINMSHSVSRLALSLLI*SYSRKD Trigger: GTCCTTCCTGGAATAGCTTCAGATCAATAGGCTTAA...GGCTAATCTACTTACTGAATGTGACATATTTATTCCTAGTTCCATACCTTTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR CCA 72 bp | TGGACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTaGGTCCCACTGATGTTGAAATTGACTGTTGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: WTLCHESSAGRH*VPLMLKLTVGA Trigger: GGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR CCA 72 bp | CAGCCAGAGTTGGACCCTATGTCACGAGAGTTCCGCTaGGAGGCACTGGGTCCCACTGATGTTGAAATTGAC | + |
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Preference number: 3 (lower is better) Translates to: QPELDPMSREFR*EALGPTDVEID Trigger: GTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCAACTCTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR-3UTR CAA 90 bp | GACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAATGTTGGGGCCCAATCTaGATGCCATTTGCCTCATTG | + |
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Preference number: 3 (lower is better) Translates to: DPMSREFRWEALGPTDVECWGPI*MPFASL Trigger: CAATGAGGCAAATGGCATCAAGATTGGGCCCCAACA...TTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR CCA 72 bp | GAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTaGGGCCCAATCTTGATGCCATTTGCCTCATTGTGG | + |
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Preference number: 3 (lower is better) Translates to: EALGPTDVEIDC*GPILMPFASLW Trigger: CCACAATGAGGCAAATGGCATCAAGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR-3UTR CAA 90 bp | TCAATGAAATTCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGCAGCTACTCGGGAGGTaGAGGCAGGAGAACTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: SMKFRGRGSINQRPTRSRQLLGR*RQENCL Trigger: CAAGCAGTTCTCCTGCCTCAACCTCCCGAGTAGCTG...CCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGAATTTCATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR-3UTR CAA 90 bp | GAGCTTACAACTTATACGGAAAGACAAGATTCCACACAAAAACAACTGCAAACCAGCGATTCTCCTGCCTaGGCCTCCCGAGTACCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ELTTYTERQDSTQKQLQTSDSPA*ASRVPG Trigger: CCCAGGTACTCGGGAGGCCAAGGCAGGAGAATCGCT...GGTTTGCAGTTGTTTTTGTGTGGAATCTTGTCTTTCCGTATAAGTTGTAAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR-3UTR CAA 90 bp | GAGCTTACAACTTATACGGAAAGACAAGATTCCACACAAAAACAACTGCAAACCGCTGGTCTCGAACTCTaGACCTCAGGTGATCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: ELTTYTERQDSTQKQLQTAGLEL*TSGDLP Trigger: GGGCAGATCACCTGAGGTCAAGAGTTCGAGACCAGC...GGTTTGCAGTTGTTTTTGTGTGGAATCTTGTCTTTCCGTATAAGTTGTAAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR TCA 72 bp | CTGAAAAGAGAATGGCTGGATAGGTACCCACTTATGTaGCTGCTTACTAGCAGGCAGCCTTACTGTATGCCT | + |
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Preference number: 3 (lower is better) Translates to: LKREWLDRYPLM*LLTSRQPYCMP Trigger: AGGCATACAGTAAGGCTGCCTGCTAGTAAGCAGTCACATAAGTGGGTACCTATCCAGCCATTCTCTTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR GCA 72 bp | AAAGAGAATGGCTGGATAGGTACCCACTTATGTGACTaGTTACTAGCAGGCAGCCTTACTGTATGCCTCATG | + |
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Preference number: 3 (lower is better) Translates to: KENGWIGTHLCD*LLAGSLTVCLM Trigger: CATGAGGCATACAGTAAGGCTGCCTGCTAGTAAGCAGTCACATAAGTGGGTACCTATCCAGCCATTCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| 3UTR-3UTR CAA 90 bp | ACTGATGTTGAAATTGACTGTTGGGGCCCAATCTTGATGCCATTTGCCTCATTGAAGGCCTCTTCAACATaGCAGGCTGTTTTGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: TDVEIDCWGPILMPFASLKASST*QAVLAE Trigger: TTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCTT...CAATGAGGCAAATGGCATCAAGATTGGGCCCCAACAGTCAATTTCAACATCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| 3UTR-3UTR CAA 90 bp | GATAGTAGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACTCAAATAGAATGTCTTaGACCCTAATTCTTAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: DSREVLSALGQVEETAFYSNRMS*TLILSG Trigger: CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGA...GTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCTACTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| 3UTR TCA 72 bp | AAGGAAGAGAACTGTATAAAACCCAGGGTAAACAAATaGGTGGGGCAGAATTACAGAGAGAGGACTCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: KEENCIKPRVNK*VGQNYRERTLK Trigger: CTTTAGAGTCCTCTCTCTGTAATTCTGCCCCACTCATTTGTTTACCCTGGGTTTTATACAGTTCTCTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CCA 90 bp | TGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGCCCAATCTTGTGGTGTCGCGTCCTCTaGGTTCCGGGTCCGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: WEALGPTDVEIDCWGPILWCRVL*VPGPPD Trigger: GTCGGGCGGACCCGGAACCCAGAGGACGCGACACCA...CAAGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR TCA 90 bp | GCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGCCCAATCTACTCCACACCTATTGTaGGGTCGTGGACAGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AGRHWVPLMLKLTVGAQSTPHLL*GRGQAG Trigger: TCCAGCCTGTCCACGACCTCACAATAGGTGTGGAGT...AGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR GCA 90 bp | TTGGACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTCTCTCTTCACATCCCTaGGGGACTCTAGGTCACGTA | + |
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Preference number: 4 (lower is better) Translates to: LDPMSREFRWEALGPTDVLSSHP*GTLGHV Trigger: TACGTGACCTAGAGTCCCGCAGGGATGTGAAGAGAG...AACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR CCA 90 bp | TGGACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGGATAAGCATAAGTCATaGTGTCGCGTCCTCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: WTLCHESSAGRHWVPLMLDKHKS*CRVLWV Trigger: AACCCAGAGGACGCGACACCATGACTTATGCTTATC...CAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR CCA 90 bp | GCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGCCCAATCTAGCAGCAGCCAGAGTTaGACCCTATGTCACGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: AGRHWVPLMLKLTVGAQSSSSQS*TLCHES Trigger: ACTCTCGTGACATAGGGTCCAACTCTGGCTGCTGCT...AGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR TCA 90 bp | GAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGTTGGGGCCCAATCTTaGTGCCATTTGCCTCATTGT | + |
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Preference number: 4 (lower is better) Translates to: ESSAGRHWVPLMLKLTVGVGAQS*CHLPHC Trigger: ACAATGAGGCAAATGGCATCAAGATTGGGCCCCAAC...CCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR GCA 90 bp | GAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGAGGCCTCTTCAACATTaGAGGCTGTTTTGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ESSAGRHWVPLMLKLTVGRPLQH*RLFWLK Trigger: CTTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCT...CCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR GCA 90 bp | GCAGCCAGAGTTGGACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCAATCTTGATGCCATTTaGCTCATTGTGGACATCAAA | + |
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Preference number: 4 (lower is better) Translates to: AARVGPYVTRVPLGGTGSNLDAI*LIVDIK Trigger: TTTGATGTCCACAATGAGGCAAATGGCATCAAGATT...GGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCAACTCTGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR CCA 90 bp | TCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTGCAAGGCGATTCTCCTGCCTTaGCCTCCCGAGTACCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SEAEDLSTKGQLDLGNCKAILLP*PPEYLG Trigger: TCCCAGGTACTCGGGAGGCCAAGGCAGGAGAATCGC...CTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CCA 90 bp | CTCATGTCCCTGAAGGAGGACAGGTCAGTAAGGGCCCAAATTCTCTCCTGGTCTAAGACCTCAGGGCTGTaGAAGAGAACGGGACATCAA | + |
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Preference number: 4 (lower is better) Translates to: LMSLKEDRSVRAQILSWSKTSGL*KRTGHQ Trigger: TTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTT...AGACCAGGAGAGAATTTGGGCCCTTACTGACCTGTCCTCCTTCAGGGACATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR TCA 90 bp | GACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAGCAGGCTGTTTTGGCTaGAGTTTCCATGAATATAAG | + |
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Preference number: 4 (lower is better) Translates to: DPMSREFRWEALGPTDVEAGCFG*SFHEYK Trigger: CTTATATTCATGGAAACTTCAGCCAAAACAGCCTGC...TTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR GCA 90 bp | GACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAATGAATATAAGTCCATaGTCCCTAGCAAAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: DPMSREFRWEALGPTDVEMNISP*SLAKAS Trigger: AGAGGCCTTTGCTAGGGAGCATGGACTTATATTCAT...TTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR CCA 90 bp | GAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGTTGAAATTGACTGTTaGGGCCCAATCTTGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: ESSAGRHWVPLMLKLTVGVEIDC*GPILMP Trigger: TGGCATCAAGATTGGGCCCCAACAGTCAATTTCAAC...CCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR GCA 90 bp | AGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGAATCAGCAGTGCTCCAGCTaGTCCCCTGTAGTAGGAACG | + |
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Preference number: 4 (lower is better) Translates to: REVLSALGQVEETAFYKNQQCSS*SPVVGT Trigger: CGTTCCTACTACAGGGGAGCAGCTGGAGCACTGCTG...ATTCTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CCA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGTGGTGTCGCGTCCTCTaGGTTCCGGGTCCGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: LGNCKCSNRMSLTLILSGWCRVL*VPGPPD Trigger: GTCGGGCGGACCCGGAACCCAGAGGACGCGACACCA...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR TCA 90 bp | GAAAGTAGAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAACTCCACACCTATTGTaGGGTCGTGGACAGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ESRKIRKTSGLWKRTGHQTPHLL*GRGQAG Trigger: TCCAGCCTGTCCACGACCTCACAATAGGTGTGGAGT...TTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTCTACTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR GCA 90 bp | GAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGCCCCTCAGCAGTGCTCCAGCTaGTCCCCTGTAGTAGGAACG | + |
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Preference number: 4 (lower is better) Translates to: ETVEVYLVKDTTMLDLAPQQCSS*SPVVGT Trigger: CGTTCCTACTACAGGGGAGCAGCTGGAGCACTGCTG...AGGGGCCAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR GCA 90 bp | CTCATGTCCCTGAAGGAGGACAGGTCAGTAAGGGCCCAAATTCTCTCCTGGTCTATGAATATAAGTCCATaGTCCCTAGCAAAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LMSLKEDRSVRAQILSWSMNISP*SLAKAS Trigger: AGAGGCCTTTGCTAGGGAGCATGGACTTATATTCAT...AGACCAGGAGAGAATTTGGGCCCTTACTGACCTGTCCTCCTTCAGGGACATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR GCA 90 bp | AGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGAATTTGCCCAGGCTGCAGTaGAATGGCGTGATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: REVLSALGQVEETAFYKNLPRLQ*NGVILA Trigger: AGCCAAGATCACGCCATTGCACTGCAGCCTGGGCAA...ATTCTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CCA 90 bp | TGCAAAGGTATGGAACTAGGAATAAATATGTCACATTCAGTAAGTAGATTAGCCTGGTGTCGCGTCCTCTaGGTTCCGGGTCCGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: CKGMELGINMSHSVSRLAWCRVL*VPGPPD Trigger: GTCGGGCGGACCCGGAACCCAGAGGACGCGACACCA...GGCTAATCTACTTACTGAATGTGACATATTTATTCCTAGTTCCATACCTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CCA 90 bp | CCCACTGATGTTGAAATTGACTGTTGGGGCCCAATCTTGATGCCATTTGCCTCAAGGTCGTGGACAGGCTaGAACCGCTTATCTGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: PTDVEIDCWGPILMPFASRSWTG*NRLSVN Trigger: GTTTACAGATAAGCGGTTCCAGCCTGTCCACGACCT...TGAGGCAAATGGCATCAAGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR CCA 90 bp | GAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAGGAAAAATCCGCTGGGAGGCACTaGGTCCCACTGATGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKFVRPQGCGRERDIKEKSAGRH*VPLMLK Trigger: TTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGA...TTTTTCCTTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | ACTGATGTTGAAATTGACTGTTGGGGCCCAATCTTGATGCCATTTGCCTCATTGTCCGCTGGGAGGCACTaGGTCCCACTGATGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDVEIDCWGPILMPFASLSAGRH*VPLMLK Trigger: TTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGA...CAATGAGGCAAATGGCATCAAGATTGGGCCCCAACAGTCAATTTCAACATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
||
| CDS-3UTR CCA 90 bp | TGCCATTTGCCTCATTGTGGACATCAAATAAACCCTGCTGGATCTTCCTATATATCACGAGAGTTCCGCTaGGAGGCACTGGGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CHLPHCGHQINPAGSSYISREFR*EALGPT Trigger: AGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGA...TATATAGGAAGATCCAGCAGGGTTTATTTGATGTCCACAATGAGGCAAATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
||
| CDS-3UTR CCA 90 bp | TCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTGCAAGAGCAGCAGCCAGAGTTaGACCCTATGTCACGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SEAEDLSTKGQLDLGNCKSSSQS*TLCHES Trigger: ACTCTCGTGACATAGGGTCCAACTCTGGCTGCTGCT...CTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGAATACCTGTAATCCAGCATaGGAGGCACTGGGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: REVLSALGQVEETAFYKNTCNPA*EALGPT Trigger: AGTGGGACCCAGTGCCTCCCATGCTGGATTACAGGT...ATTCTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649801.1 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGAATGGCAGGAGAACTGCTTaGACCTGGAAAGTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: REVLSALGQVEETAFYKNGRRTA*TWKVEV Trigger: AACCTCCACTTTCCAGGTTCAAGCAGTTCTCCTGCC...ATTCTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR GCA 90 bp | GATAGTAGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACTTGGAACTAGAGTGCTaGCGGGCATCCTCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSREVLSALGQVEETAFYLELEC*RASSNH Trigger: ATGGTTAGAGGATGCCCGGCAGCACTCTAGTTCCAA...GTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCTACTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | GAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAGGAAAAACCTATTGTGAGGTCGTaGACAGGCTGGAACCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: EKFVRPQGCGRERDIKEKPIVRS*TGWNRL Trigger: TAAGCGGTTCCAGCCTGTCCACGACCTCACAATAGG...TTTTTCCTTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | TCAATGAAATTCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGCCTATTGTGAGGTCGTaGACAGGCTGGAACCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SMKFRGRGSINQRPTRSRPIVRS*TGWNRL Trigger: TAAGCGGTTCCAGCCTGTCCACGACCTCACAATAGG...CCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGAATTTCATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | GCAAAACATCACACTTTAAAAAGAGGCTGCTCTCAGCCAAAGCAAGAAAGACCTCAGGCTGCAGTGCAATaGCGTGATCTTGGCTTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AKHHTLKRGCSQPKQERPQAAVQ*RDLGLA Trigger: CGCTAAGCCAAGATCACGCCATTGCACTGCAGCCTG...AGGTCTTTCTTGCTTTGGCTGAGAGCAGCCTCTTTTTAAAGTGTGATGTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR TCA 90 bp | GAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGCCCCTGTGGCCACATGTCCCTaGCCAACTTCACTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ETVEVYLVKDTTMLDLAPVATCP*PTSLLL Trigger: TAAGAGCAGTGAAGTTGGTCAGGGACATGTGGCCAC...AGGGGCCAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | TTGATGCCATTTGCCTCATTGTGGACATCAAATAAACCCTGCTGGATCTTCCTACCTATTGTGAGGTCGTaGACAGGCTGGAACCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LMPFASLWTSNKPCWIFLPIVRS*TGWNRL Trigger: TAAGCGGTTCCAGCCTGTCCACGACCTCACAATAGG...TAGGAAGATCCAGCAGGGTTTATTTGATGTCCACAATGAGGCAAATGGCATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
||
| CDS-3UTR CCA 90 bp | TCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTGCAAGAACCATGAGGTCAGGTaGTTGAAGGTTTCACGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEAEDLSTKGQLDLGNCKNHEVR*LKVSRL Trigger: AAGGCGTGAAACCTTCAACCACCTGACCTCATGGTT...CTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | TCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTGCAAGGCCCAAATTCTCTCCTaGTCTTTAGGTGGAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAEDLSTKGQLDLGNCKAQILS*SLGGKA Trigger: TGCCTTTCCACCTAAAGACCAGGAGAGAATTTGGGC...CTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | GGCCAACTAGATCTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAGGCCTCCCGAGTACCTaGGATTACAGGCATGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLDLGNCKCSNRMSLTLGLPST*DYRHAP Trigger: TGGTGCATGCCTGTAATCCCAGGTACTCGGGAGGCC...TAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATCTAGTTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGGTATGCCTCATGGAATaGAGGCAAAAAGCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SREVLSALGQVEETAFYKVCLME*RQKARE Trigger: TTCCCTGGCTTTTTGCCTCCATTCCATGAGGCATAC...CTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR TCA 90 bp | GGCCAACTAGATCTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAACTCCACACCTATTGTaGGGTCGTGGACAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQLDLGNCKCSNRMSLTLTPHLL*GRGQAG Trigger: TCCAGCCTGTCCACGACCTCACAATAGGTGTGGAGT...TAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATCTAGTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | GAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGCCCCTTTGGAACTAGAGTGCTaGCGGGCATCCTCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETVEVYLVKDTTMLDLAPLELEC*RASSNH Trigger: ATGGTTAGAGGATGCCCGGCAGCACTCTAGTTCCAA...AGGGGCCAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | GGCTGCATGATGAGTGAAGCAAAGGCAAGTTTGGCTAAGATAGTATTATATGCTCTCTCTTCACATCCCTaGGGGACTCTAGGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCMMSEAKASLAKIVLYALSSHP*GTLGHS Trigger: AGAGTGACCTAGAGTCCCGCAGGGATGTGAAGAGAG...AGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGTAGAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAATTGAGGCAGGAGAACTaGTTGAACCTGGAAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESRKIRKTSGLWKRTGHQLRQEN*LNLESG Trigger: TCCACTTTCCAGGTTCAAGCAGTTCTCCTGCCTCAA...TTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTCTACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | AGAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAGGAAAAAACCATGAGGTCAGGTaGTTGAAGGTTTCACGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKIRKTSGLWKRTGHQGKNHEVR*LKVSRL Trigger: AAGGCGTGAAACCTTCAACCACCTGACCTCATGGTT...TTTTCCTTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTCT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | AAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGAAGTGGATTGTATCACGAGAGTTCCGCTaGGAGGCACTGGGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KCSNRMSLTLILSGKWIVSREFR*EALGPT Trigger: AGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGA...TACAATCCACTTCCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | GATAGTAGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAGAATTCTTAGGAAGTaGCAAGCAGACACCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSREVLSALGQVEETAFYRILRK*QADTQR Trigger: CCTTTGGGTGTCTGCTTGCCACTTCCTAAGAATTCT...GTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCTACTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | TCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGAAGTGGATTGTATATGCTGTCGTACACCAGCAGTaGTCCAGCTGCTCCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNRMSLTLILSGKWIVYAVVHQQ*SSCSPV Trigger: TACAGGGGAGCAGCTGGAGCACTGCTGGTGTACGAC...AGCATATACAATCCACTTCCCACTAAGAATTAGGGTCAAAGACATTCTATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | GGCTGCATGATGAGTGAAGCAAAGGCAAGTTTGGCTAAGATAGTATTATATGCTATGTTGGAACTAGAGTaGTGCCGGGCATCCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCMMSEAKASLAKIVLYAMLELE*CRASSN Trigger: GTTAGAGGATGCCCGGCAGCACTCTAGTTCCAACAT...AGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR GCA 90 bp | GTAATAATAAGTGGCCACATGTCCCTGACCAACTTCACTGCTCTTAAAAGTTTTCTCTCTTCACATCCCTaGGGGACTCTAGGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIISGHMSLTNFTALKSFLSSHP*GTLGHS Trigger: AGAGTGACCTAGAGTCCCGCAGGGATGTGAAGAGAG...AAAACTTTTAAGAGCAGTGAAGTTGGTCAGGGACATGTGGCCACTTATTATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | GAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGCCCCTAGGCCTCTTCAACATTaGAGGCTGTTTTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETVEVYLVKDTTMLDLAPRPLQH*RLFWLK Trigger: CTTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCT...AGGGGCCAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | GGCTGCATGATGAGTGAAGCAAAGGCAAGTTTGGCTAAGATAGTATTATATGCTAGGTCGTGGACAGGCTaGAACCGCTTATCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCMMSEAKASLAKIVLYARSWTG*NRLSVN Trigger: GTTTACAGATAAGCGGTTCCAGCCTGTCCACGACCT...AGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | GAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAGGAAAAACTCCTGGTCTTTAGGTaGAAAGGCAAAACATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EKFVRPQGCGRERDIKEKLLVFR*KGKTSH Trigger: GTGTGATGTTTTGCCTTTCCACCTAAAGACCAGGAG...TTTTTCCTTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGCATGATGAGTGAAGCAAAGGCAAGTTTGGCTAAGATAGTATTATATGCTGTAACCTTCACCTCCTaGGTTCAAGCGATTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCMMSEAKASLAKIVLYAVTFTS*VQAILL Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGAAGGTTAC...AGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR TCA 90 bp | GTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGCCCCTAAAATAGTTGGGGCCCAATCTTaGTGCCATTTGCCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VEVYLVKDTTMLDLAPKIVGAQS*CHLPHC Trigger: ACAATGAGGCAAATGGCATCAAGATTGGGCCCCAAC...TATTTTAGGGGCCAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR TCA 90 bp | GGCTGCATGATGAGTGAAGCAAAGGCAAGTTTGGCTAAGATAGTATTATATGCTCCCAGGGTAAACAAATaGGTGGGGCAGAATTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCMMSEAKASLAKIVLYAPRVNK*VGQNYR Trigger: TCTGTAATTCTGCCCCACTCATTTGTTTACCCTGGG...AGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR GCA 90 bp | GTAATAATAAGTGGCCACATGTCCCTGACCAACTTCACTGCTCTTAAAAGTTTTGAACGGAAGGATTCTTaGCCAGCCGTATCCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VIISGHMSLTNFTALKSFERKDS*PAVSQI Trigger: AATCTGGGATACGGCTGGGCAAGAATCCTTCCGTTC...AAAACTTTTAAGAGCAGTGAAGTTGGTCAGGGACATGTGGCCACTTATTATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | GTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGCCCCTAAAATAATGTTGGAACTAGAGTaGTGCCGGGCATCCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VEVYLVKDTTMLDLAPKIMLELE*CRASSN Trigger: GTTAGAGGATGCCCGGCAGCACTCTAGTTCCAACAT...TATTTTAGGGGCCAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | GGCCAACTAGATCTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTACTGGAAAGTGGAGGTTaGAGTGAGCCAAGATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GQLDLGNCKCSNRMSLTLLESGG*SEPRSC Trigger: GCATGATCTTGGCTCACTGCAACCTCCACTTTCCAG...TAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATCTAGTTGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGCATGATGAGTGAAGCAAAGGCAAGTTTGGCTAAGATAGTATTATATGCTGATAAGCATAAGTCATaGTGTCGCGTCCTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GCMMSEAKASLAKIVLYADKHKS*CRVLWV Trigger: AACCCAGAGGACGCGACACCATGACTTATGCTTATC...AGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR TCA 90 bp | AAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGAAGTGGATTGTAGTGGCCACATGTCCCTaGCCAACTTCACTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KCSNRMSLTLILSGKWIVVATCP*PTSLLL Trigger: TAAGAGCAGTGAAGTTGGTCAGGGACATGTGGCCAC...TACAATCCACTTCCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | GGCTGCATGATGAGTGAAGCAAAGGCAAGTTTGGCTAAGATAGTATTATATGCTGCTCTGAAAAGAGAATaGCTGGATAGGTACCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GCMMSEAKASLAKIVLYAALKRE*LDRYPL Trigger: AAGTGGGTACCTATCCAGCCATTCTCTTTTCAGAGC...AGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR TCA 90 bp | TTTGATGAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGTTGGGGCCCAATCTTaGTGCCATTTGCCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: FDETVEVYLVKDTTMLDLVGAQS*CHLPHC Trigger: ACAATGAGGCAAATGGCATCAAGATTGGGCCCCAAC...CAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTCATCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR TCA 90 bp | AAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGAAGTGGATTGTAAGGTACCCACTTATGTaGCTGCTTACTAGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCSNRMSLTLILSGKWIVRYPLM*LLTSRQ Trigger: CTGCCTGCTAGTAAGCAGTCACATAAGTGGGTACCT...TACAATCCACTTCCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR TCA 90 bp | ACTATGTCAGTCAAATTCAATGAACACATAATGAGTAGCACTAGGCACTGTAAAAGGCTGCATGATGAGTaGAGCAAAGGCAAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TMSVKFNEHIMSSTRHCKRLHDE*SKGKFG Trigger: GCCAAACTTGCCTTTGCTTCACTCATCATGCAGCCT...TTTACAGTGCCTAGTGCTACTCATTATGTGTTCATTGAATTTGACTGACATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR GCA 90 bp | TCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGAAGTGGATTGTATATGCTGAACGGAAGGATTCTTaGCCAGCCGTATCCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SNRMSLTLILSGKWIVYAERKDS*PAVSQI Trigger: AATCTGGGATACGGCTGGGCAAGAATCCTTCCGTTC...AGCATATACAATCCACTTCCCACTAAGAATTAGGGTCAAAGACATTCTATTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | TTTGATGAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGGCAGCCTTACTGTATaGCTCATGGAATGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FDETVEVYLVKDTTMLDLGSLTV*LMEWRQ Trigger: TTGCCTCCATTCCATGAGGCATACAGTAAGGCTGCC...CAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTCATCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGGTATGGAACTAGGAATAAATATGTCACATTCAGTAAGTAGATTAGCCAGGTCGTGGACAGGCTaGAACCGCTTATCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CKGMELGINMSHSVSRLARSWTG*NRLSVN Trigger: GTTTACAGATAAGCGGTTCCAGCCTGTCCACGACCT...GGCTAATCTACTTACTGAATGTGACATATTTATTCCTAGTTCCATACCTTTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | GAGCTTACAACTTATACGGAAAGACAAGATTCCACACAAAAACAACTGCAAACCGTTGAAATTGACTGTTaGGGCCCAATCTTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELTTYTERQDSTQKQLQTVEIDC*GPILMP Trigger: TGGCATCAAGATTGGGCCCCAACAGTCAATTTCAAC...GGTTTGCAGTTGTTTTTGTGTGGAATCTTGTCTTTCCGTATAAGTTGTAAGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGATTCTTAGTGGGAAGTaGATTGTATATGCTTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SREVLSALGQVEETAFYKILSGK*IVYAYE Trigger: TTCGTAAGCATATACAATCCACTTCCCACTAAGAAT...CTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR TCA 90 bp | GTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGGCCCCTAAAATAGCAGGCTGTTTTGGCTaGAGTTTCCATGAATATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VEVYLVKDTTMLDLAPKIAGCFG*SFHEYK Trigger: CTTATATTCATGGAAACTTCAGCCAAAACAGCCTGC...TATTTTAGGGGCCAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR TCA 90 bp | GGCCAACTAGATCTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTATTAAGCCTATTGATCTaGAGCTATTCCAGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GQLDLGNCKCSNRMSLTLLSLLI*SYSRKD Trigger: GTCCTTCCTGGAATAGCTTCAGATCAATAGGCTTAA...TAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATCTAGTTGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR GCA 90 bp | TTTGATGAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGAGGCCTCTTCAACATTaGAGGCTGTTTTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FDETVEVYLVKDTTMLDLRPLQH*RLFWLK Trigger: CTTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCT...CAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTCATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | GCAAAACATCACACTTTAAAAAGAGGCTGCTCTCAGCCAAAGCAAGAAAGACCTAATCTTGATGCCATTTaGCTCATTGTGGACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKHHTLKRGCSQPKQERPNLDAI*LIVDIK Trigger: TTTGATGTCCACAATGAGGCAAATGGCATCAAGATT...AGGTCTTTCTTGCTTTGGCTGAGAGCAGCCTCTTTTTAAAGTGTGATGTTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CCA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGGTTGAAATTGACTGTTaGGGCCCAATCTTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGNCKCSNRMSLTLILSGVEIDC*GPILMP Trigger: TGGCATCAAGATTGGGCCCCAACAGTCAATTTCAAC...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | TTTGATGAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGAGAATTCTTAGGAAGTaGCAAGCAGACACCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDETVEVYLVKDTTMLDLRILRK*QADTQR Trigger: CCTTTGGGTGTCTGCTTGCCACTTCCTAAGAATTCT...CAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTCATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGGTATGGAACTAGGAATAAATATGTCACATTCAGTAAGTAGATTAGCCATGAATATAAGTCCATaGTCCCTAGCAAAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKGMELGINMSHSVSRLAMNISP*SLAKAS Trigger: AGAGGCCTTTGCTAGGGAGCATGGACTTATATTCAT...GGCTAATCTACTTACTGAATGTGACATATTTATTCCTAGTTCCATACCTTTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGTTAGGTAATAATAAGTaGCCACATGTCCCTGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGNCKCSNRMSLTLILSGLGNNK*PHVPDQ Trigger: TTGGTCAGGGACATGTGGCCACTTATTATTACCTAA...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR GCA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGAATCTTGATGCCATTTaGCTCATTGTGGACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGNCKCSNRMSLTLILSGNLDAI*LIVDIK Trigger: TTTGATGTCCACAATGAGGCAAATGGCATCAAGATT...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGGTATGGAACTAGGAATAAATATGTCACATTCAGTAAGTAGATTAGCCTTAGGTAATAATAAGTaGCCACATGTCCCTGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CKGMELGINMSHSVSRLALGNNK*PHVPDQ Trigger: TTGGTCAGGGACATGTGGCCACTTATTATTACCTAA...GGCTAATCTACTTACTGAATGTGACATATTTATTCCTAGTTCCATACCTTTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CCA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGATTCTTAGTGGGAAGTaGATTGTATATGCTTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGNCKCSNRMSLTLILSGILSGK*IVYAYE Trigger: TTCGTAAGCATATACAATCCACTTCCCACTAAGAAT...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| 3UTR CAA 72 bp | GATCTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTaGACCCTAATTCTTAGTGGGAAGTGGATTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: DLGNCKCSNRMS*TLILSGKWIVY Trigger: ATATACAATCCACTTCCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS CCA 90 bp | GTTCAGCAGCAGCCAGAGTTGGACCCTATGTCACGAGAGTTCCGCTaGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQQQPELDPMSREFR*EALGPTDVEIDCWG Trigger: GCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCAACTCTGGCTGCTGCTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CAA 90 bp | ACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAATGGGTCCCACTGATGTaGAAATTGACTGTTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLCHESSAGRHWVPLMLKWVPLM*KLTVGA Trigger: GGCCCCAACAGTCAATTTCAACATCAGTGGGACCCA...TTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
||
| CDS GCA 90 bp | CCTATTGTGAGGTCGTGGACAGGCTGGAACCGCTTATCTGTAAACTaGAGGAGGAGACATGACTTCCCCACACCTGTGTCTCCGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PIVRSWTGWNRLSVN*RRRHDFPTPVSPMM Trigger: CATCATCGGAGACACAGGTGTGGGGAAGTCATGTCTCCTCCTGCAGTTTACAGATAAGCGGTTCCAGCCTGTCCACGACCTCACAATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000397762.6 ENST00000417141.5 ENST00000475857.1 ENST00000485996.1 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | AGCAGCAGCCAGAGTTGGACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGATGCCATTTGCCTCATaGTGGACATCAAATAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSQSWTLCHESSAGRHWMPFAS*WTSNKP Trigger: GGGTTTATTTGATGTCCACAATGAGGCAAATGGCAT...CCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCAACTCTGGCTGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417141.5 |
||
| CDS-3UTR CAA 90 bp | CTCATGTCCCTGAAGGAGGACAGGTCAGTAAGGGCCCAAATTCTCTCCTGGTCTTGGGTCCCACTGATGTaGAAATTGACTGTTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LMSLKEDRSVRAQILSWSWVPLM*KLTVGA Trigger: GGCCCCAACAGTCAATTTCAACATCAGTGGGACCCA...AGACCAGGAGAGAATTTGGGCCCTTACTGACCTGTCCTCCTTCAGGGACATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CAA 90 bp | CTCATGTCCCTGAAGGAGGACAGGTCAGTAAGGGCCCAAATTCTCTCCTGGTCTAGCATGATAACCATGTaGGAACTAGAGTGCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LMSLKEDRSVRAQILSWSSMITM*ELECCR Trigger: CCGGCAGCACTCTAGTTCCAACATGGTTATCATGCT...AGACCAGGAGAGAATTTGGGCCCTTACTGACCTGTCCTCCTTCAGGGACATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CAA 90 bp | TGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGCCCAATCTTGCCACTGATGTTGAAATaGACTGTTGGGGCCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: WEALGPTDVEIDCWGPILPLMLK*TVGAQS Trigger: AGATTGGGCCCCAACAGTCAATTTCAACATCAGTGG...CAAGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417141.5 |
||
| CDS CCA 90 bp | CCAGCATGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTaGGGCCCAATCTTGATGCCATTTGCCTCATTGTGGACATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PAWEALGPTDVEIDC*GPILMPFASLWTSN Trigger: ATTTGATGTCCACAATGAGGCAAATGGCATCAAGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCATGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | AGAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAGGAAAACAGCTACTCGGGAGGTaGAGGCAGGAGAACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKIRKTSGLWKRTGHQGKQLLGR*RQENCL Trigger: CAAGCAGTTCTCCTGCCTCAACCTCCCGAGTAGCTG...TTTTCCTTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CAA 90 bp | TCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTGCAAGAGAACGGAAGGATTCTaGCCCAGCCGTATCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SEAEDLSTKGQLDLGNCKRTEGF*PSRIPD Trigger: ATCTGGGATACGGCTGGGCAAGAATCCTTCCGTTCT...CTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | TCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTGCAAGAGGCAGGAGAACTGCTaGAACCTGGAAAGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SEAEDLSTKGQLDLGNCKRQENC*NLESGG Trigger: ACCTCCACTTTCCAGGTTCAAGCAGTTCTCCTGCCT...CTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CAA 90 bp | GCTGGGAGGCACTGGGTCCCACTGATGTTGAAATTGACTGTTGGGGCCCAATCTTCACGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGRHWVPLMLKLTVGAQSSRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGTGA...AGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGGACCCAGTGCCTCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR CAA 90 bp | ACCCTATGTCACGAGAGTTCCGCTGGGAGGCACTGGGTCCCACTGATGTTGAAATCCCAGATTTGCAGTTaGATTTGTTTTCCATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TLCHESSAGRHWVPLMLKSQICS*ICFPSM Trigger: CATTGATGGAAAACAAATCAAACTGCAAATCTGGGA...TTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAACTCTCGTGACATAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR CAA 90 bp | TCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTGCAAGAGCATGATAACCATGTaGGAACTAGAGTGCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SEAEDLSTKGQLDLGNCKSMITM*ELECCR Trigger: CCGGCAGCACTCTAGTTCCAACATGGTTATCATGCT...CTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | AGTAGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGTGTTGGGGCCCAATCTaGATGCCATTTGCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SREVLSALGQVEETAFYKCWGPI*MPFASL Trigger: CAATGAGGCAAATGGCATCAAGATTGGGCCCCAACA...CTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | TCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGTAATTGCAAGTGTTGGGGCCCAATCTaGATGCCATTTGCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SEAEDLSTKGQLDLGNCKCWGPI*MPFASL Trigger: CAATGAGGCAAATGGCATCAAGATTGGGCCCCAACA...CTTGCAATTACCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACAAGAATCATGAGGTCAGGTGGTaGAAGGTTTCACGCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: REVLSALGQVEETAFYKNHEVRW*KVSRLV Trigger: TACAAGGCGTGAAACCTTCAACCACCTGACCTCATG...ATTCTTGTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | TGCAAAGGTATGGAACTAGGAATAAATATGTCACATTCAGTAAGTAGATTAGCCAGCGATTCTCCTGCCTaGGCCTCCCGAGTACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CKGMELGINMSHSVSRLASDSPA*ASRVPG Trigger: CCCAGGTACTCGGGAGGCCAAGGCAGGAGAATCGCT...GGCTAATCTACTTACTGAATGTGACATATTTATTCCTAGTTCCATACCTTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CAA 90 bp | CCCACTGATGTTGAAATTGACTGTTGGGGCCCAATCTTGATGCCATTTGCCTCATGTTTTCCATCAATGTaGACCATACGAGCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PTDVEIDCWGPILMPFASCFPSM*TIRAPN Trigger: GTTTGGAGCTCGTATGGTCAACATTGATGGAAAACA...TGAGGCAAATGGCATCAAGATTGGGCCCCAACAGTCAATTTCAACATCAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417141.5 |
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| CDS-3UTR CAA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGCAGCAGCAGCCAGAGTaGGACCCTATGTCACGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGNCKCSNRMSLTLILSGQQQPE*DPMSRE Trigger: CTCTCGTGACATAGGGTCCAACTCTGGCTGCTGCTG...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CAA 90 bp | GATAGTAGAGAAGTACTCAGTGCTCTTGGGCAAGTAGAGGAAACTGCCTTCTACTGTTTTCCATCAATGTaGACCATACGAGCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSREVLSALGQVEETAFYCFPSM*TIRAPN Trigger: GTTTGGAGCTCGTATGGTCAACATTGATGGAAAACA...GTAGAAGGCAGTTTCCTCTACTTGCCCAAGAGCACTGAGTACTTCTCTACTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | GCAAAACATCACACTTTAAAAAGAGGCTGCTCTCAGCCAAAGCAAGAAAGACCTAAGGCCTCTTCAACATaGCAGGCTGTTTTGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKHHTLKRGCSQPKQERPKASST*QAVLAE Trigger: TTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCTT...AGGTCTTTCTTGCTTTGGCTGAGAGCAGCCTCTTTTTAAAGTGTGATGTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CAA 90 bp | TGCCATTTGCCTCATTGTGGACATCAAATAAACCCTGCTGGATCTTCCTATATATGTTGGGGCCCAATCTaGATGCCATTTGCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: CHLPHCGHQINPAGSSYICWGPI*MPFASL Trigger: CAATGAGGCAAATGGCATCAAGATTGGGCCCCAACA...TATATAGGAAGATCCAGCAGGGTTTATTTGATGTCCACAATGAGGCAAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
||
| CDS-3UTR CAA 90 bp | GTAATAATAAGTGGCCACATGTCCCTGACCAACTTCACTGCTCTTAAAAGTTTTTGGGTCCCACTGATGTaGAAATTGACTGTTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VIISGHMSLTNFTALKSFWVPLM*KLTVGA Trigger: GGCCCCAACAGTCAATTTCAACATCAGTGGGACCCA...AAAACTTTTAAGAGCAGTGAAGTTGGTCAGGGACATGTGGCCACTTATTATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CAA 90 bp | GAAAGTAGAAAAATTCGTAAGACCTCAGGGCTGTGGAAGAGAACGGGACATCAAAGCCGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESRKIRKTSGLWKRTGHQSRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGGCT...TTGATGTCCCGTTCTCTTCCACAGCCCTGAGGTCTTACGAATTTTTCTACTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CAA 90 bp | TCAATGAAATTCCGAGGCAGAGGATCTATCAACCAAAGGCCAACTAGATCTAGGAGCCGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMKFRGRGSINQRPTRSRSRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGGCT...CCTAGATCTAGTTGGCCTTTGGTTGATAGATCCTCTGCCTCGGAATTTCATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CAA 90 bp | GAGCTTACAACTTATACGGAAAGACAAGATTCCACACAAAAACAACTGCAAACCCATGAGGTCAGGTGGTaGAAGGTTTCACGCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ELTTYTERQDSTQKQLQTHEVRW*KVSRLV Trigger: TACAAGGCGTGAAACCTTCAACCACCTGACCTCATG...GGTTTGCAGTTGTTTTTGTGTGGAATCTTGTCTTTCCGTATAAGTTGTAAGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CAA 90 bp | ATGCCATTTGCCTCATTGTGGACATCAAATAAACCCTGCTGGATCTTCCTATATAAGGCCTCTTCAACATaGCAGGCTGTTTTGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: MPFASLWTSNKPCWIFLYKASST*QAVLAE Trigger: TTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCTT...ATATAGGAAGATCCAGCAGGGTTTATTTGATGTCCACAATGAGGCAAATGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417141.5 |
||
| CDS-3UTR CAA 90 bp | ACTATGTCAGTCAAATTCAATGAACACATAATGAGTAGCACTAGGCACTGTAAAAGAACGGAAGGATTCTaGCCCAGCCGTATCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TMSVKFNEHIMSSTRHCKRTEGF*PSRIPD Trigger: ATCTGGGATACGGCTGGGCAAGAATCCTTCCGTTCT...TTTACAGTGCCTAGTGCTACTCATTATGTGTTCATTGAATTTGACTGACATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
||
| CDS-3UTR CAA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGCCACTGATGTTGAAATaGACTGTTGGGGCCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LGNCKCSNRMSLTLILSGPLMLK*TVGAQS Trigger: AGATTGGGCCCCAACAGTCAATTTCAACATCAGTGG...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
||
| CDS-3UTR CAA 90 bp | AAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGAAGTGGATTGTAAAGGCCTCTTCAACATaGCAGGCTGTTTTGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KCSNRMSLTLILSGKWIVKASST*QAVLAE Trigger: TTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCTT...TACAATCCACTTCCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | GGCCAACTAGATCTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATGCCATTTGCCTCATaGTGGACATCAAATAAACCC | + |
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Preference number: 5 (lower is better) Translates to: GQLDLGNCKCSNRMSLTLMPFAS*WTSNKP Trigger: GGGTTTATTTGATGTCCACAATGAGGCAAATGGCAT...TAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAGATCTAGTTGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | TTTGATGAAACAGTAGAAGTCTATCTGGTGAAAGACACTACAATGTTAGATCTGCCACTGATGTTGAAATaGACTGTTGGGGCCCAATCT | + |
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Preference number: 5 (lower is better) Translates to: FDETVEVYLVKDTTMLDLPLMLK*TVGAQS Trigger: AGATTGGGCCCCAACAGTCAATTTCAACATCAGTGG...CAGATCTAACATTGTAGTGTCTTTCACCAGATAGACTTCTACTGTTTCATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | GCAAAACATCACACTTTAAAAAGAGGCTGCTCTCAGCCAAAGCAAGAAAGACCTTCAAATAGAATGTCTTaGACCCTAATTCTTAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: AKHHTLKRGCSQPKQERPSNRMS*TLILSG Trigger: CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGA...AGGTCTTTCTTGCTTTGGCTGAGAGCAGCCTCTTTTTAAAGTGTGATGTTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CAA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGTGTTTTCCATCAATGTaGACCATACGAGCTCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LGNCKCSNRMSLTLILSGCFPSM*TIRAPN Trigger: GTTTGGAGCTCGTATGGTCAACATTGATGGAAAACA...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | GGCTGCATGATGAGTGAAGCAAAGGCAAGTTTGGCTAAGATAGTATTATATGCTTCCCAGATTTGCAGTTaGATTTGTTTTCCATCAATG | + |
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Preference number: 5 (lower is better) Translates to: GCMMSEAKASLAKIVLYASQICS*ICFPSM Trigger: CATTGATGGAAAACAAATCAAACTGCAAATCTGGGA...AGCATATAATACTATCTTAGCCAAACTTGCCTTTGCTTCACTCATCATGCAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS-3UTR CAA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGATGCCATTTGCCTCATaGTGGACATCAAATAAACCC | + |
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Preference number: 5 (lower is better) Translates to: LGNCKCSNRMSLTLILSGMPFAS*WTSNKP Trigger: GGGTTTATTTGATGTCCACAATGAGGCAAATGGCAT...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS-3UTR CAA 90 bp | CTAGGTAATTGCAAGTGTTCAAATAGAATGTCTTTGACCCTAATTCTTAGTGGGTCAAATAGAATGTCTTaGACCCTAATTCTTAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LGNCKCSNRMSLTLILSGSNRMS*TLILSG Trigger: CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGA...CCCACTAAGAATTAGGGTCAAAGACATTCTATTTGAACACTTGCAATTACCTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397762.6 ENST00000649801.1 |
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| CDS GCA 72 bp | AGGTCGTGGACAGGCTGGAACCGCTTATCTGTAAACTaGAGGAGGAGACATGACTTCCCCACACCTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RSWTGWNRLSVN*RRRHDFPTPVS Trigger: AGACACAGGTGTGGGGAAGTCATGTCTCCTCCTGCAGTTTACAGATAAGCGGTTCCAGCCTGTCCACGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000397762.6 ENST00000417141.5 ENST00000475857.1 ENST00000485996.1 ENST00000649801.1 |
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| CDS CCA 72 bp | GAGTGCTGCCGGGCATCCTCTAACCATGAGGTCAGGTaGTTGAAGGTTTCACGCCTTGTAATGTCGTACACC | + |
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Preference number: 6 (lower is better) Translates to: ECCRASSNHEVR*LKVSRLVMSYT Trigger: GGTGTACGACATTACAAGGCGTGAAACCTTCAACCACCTGACCTCATGGTTAGAGGATGCCCGGCAGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397762.6 ENST00000461909.1 ENST00000649801.1 |
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| CDS CCA 72 bp | AAAAGTTCAAGCCAGATGTTCAGCAGCAGCCAGAGTTaGACCCTATGTCACGAGAGTTCCGCTGGGAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: KSSSQMFSSSQS*TLCHESSAGRH Trigger: GTGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCAACTCTGGCTGCTGCTGAACATCTGGCTTGAACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS CAA 72 bp | TGCTGCCGGGCATCCTCTAACCATGAGGTCAGGTGGTaGAAGGTTTCACGCCTTGTAATGTCGTACACCAGC | + |
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Preference number: 6 (lower is better) Translates to: CCRASSNHEVRW*KVSRLVMSYTS Trigger: GCTGGTGTACGACATTACAAGGCGTGAAACCTTCAACCACCTGACCTCATGGTTAGAGGATGCCCGGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397762.6 ENST00000461909.1 ENST00000649801.1 |
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| CDS CAA 72 bp | AAAAAGTTCAAGCCAGATGTTCAGCAGCAGCCAGAGTaGGACCCTATGTCACGAGAGTTCCGCTGGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: KKFKPDVQQQPE*DPMSREFRWEA Trigger: TGCCTCCCAGCGGAACTCTCGTGACATAGGGTCCAACTCTGGCTGCTGCTGAACATCTGGCTTGAACTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397762.6 |
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| CDS TCA 72 bp | CTGGAACCGCTTATCTGTAAACTGCAGGAGGAGACATaGCTTCCCCACACCTGTGTCTCCGATGATGATATA | + |
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Preference number: 6 (lower is better) Translates to: LEPLICKLQEET*LPHTCVSDDDI Trigger: TATATCATCATCGGAGACACAGGTGTGGGGAAGTCATGTCTCCTCCTGCAGTTTACAGATAAGCGGTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000397762.6 ENST00000417141.5 ENST00000475857.1 ENST00000485996.1 ENST00000649801.1 |
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| CDS CCA 72 bp | TCCTTTGCATCAGCTTTTCTTGTTATACTTGGATATTaGTCAGAGACTAAATTATTTTGTACTCTCACCGTA | + |
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Preference number: 6 (lower is better) Translates to: SFASAFLVILGY*SETKLFCTLTV Trigger: TACGGTGAGAGTACAAAATAATTTAGTCTCTGACCAATATCCAAGTATAACAAGAAAAGCTGATGCAAAGGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475857.1 |
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