RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB27B (Homo sapiens)

Ensembl gene IDs: ENSG00000041353

Ensembl transcript IDs: ENST00000262094.10, ENST00000586570.5, ENST00000586594.1, ENST00000592334.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACAGGCATTGAGATAATGAAGAGCATCCCAGAGGAAACACCATaGGAGGGAATACCCAGCCACAACCCATCTTCGAACCTGTTGCGA +
Preference number: 1 (lower is better)
Translates to: GTGIEIMKSIPEETP*EGIPSHNPSSNLLR
Trigger: TCGCAACAGGTTCGAAGATGGGTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTATCTCAATGCCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR GCA 90 bp GAGGGAATACCCAGCCACAACCCATCTTCGAACCTGTTGCGATGCTaGAGAAATCAGAGGAGCTGGCCAGTTAATGCTGAGAATTTCATC +
Preference number: 1 (lower is better)
Translates to: EGIPSHNPSSNLLRC*RNQRSWPVNAENFI
Trigger: GATGAAATTCTCAGCATTAACTGGCCAGCTCCTCTGATTTCTGCAGCATCGCAACAGGTTCGAAGATGGGTTGTGGCTGGGTATTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR TCA 90 bp TTGCTCCTACAGAATTTGCTAATAATCCTTGTAGACAAAGTCAGCTaGAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACC +
Preference number: 1 (lower is better)
Translates to: LLLQNLLIILVDKVS*RMLAITSTTSWKGT
Trigger: GGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAGCTGACTTTGTCTACAAGGATTATTAGCAAATTCTGTAGGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR TCA 90 bp GAAATGAGCTATGTGGTTGGAGACAAATTTGGTCACAGAGGTATCTaGGGCACCGAGTTAGAGCAATGTAAACATCAAACCAGTGTAAAT +
Preference number: 1 (lower is better)
Translates to: EMSYVVGDKFGHRGI*GTELEQCKHQTSVN
Trigger: ATTTACACTGGTTTGATGTTTACATTGCTCTAACTCGGTGCCTCAGATACCTCTGTGACCAAATTTGTCTCCAACCACATAGCTCATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR GCA 90 bp TATTTTTACAGGAATAGTCTTGCAATTATGGGCATCATCAACCTCTaGTTCATGCTACAGCTATCAAATAATGATCTTAAAACAGACCCT +
Preference number: 1 (lower is better)
Translates to: YFYRNSLAIMGIINL*FMLQLSNNDLKTDP
Trigger: AGGGTCTGTTTTAAGATCATTATTTGATAGCTGTAGCATGAAGCAGAGGTTGATGATGCCCATAATTGCAAGACTATTCCTGTAAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACCCAGAGGAAACACCATaGGAGGGAATACCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDPEETP*EGIPSH
Trigger: GTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGG...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACGGTCACAGAGGTATCTaGGGCACCGAGTTAGAGCAA +
Preference number: 2 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDGHRGI*GTELEQ
Trigger: TTGCTCTAACTCGGTGCCTCAGATACCTCTGTGACC...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR GCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCAACCTGTTGCGATGCTaGAGAAATCAGAGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGINLLRC*RNQRSW
Trigger: CCAGCTCCTCTGATTTCTGCAGCATCGCAACAGGTT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACTTCGCAGAGGTAAGCTaGATGATGGACTGGGATTTT +
Preference number: 2 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNFAEVS*MMDWDF
Trigger: AAAATCCCAGTCCATCATTCAGCTTACCTCTGCGAA...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTCATGGCACAGGCATTaGGATAATGAAGAGCATCCC +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGISWHRH*DNEEHP
Trigger: GGGATGCTCTTCATTATCTCAATGCCTGTGCCATGA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR GCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGGCATCATCAACCTCTaGTTCATGCTACAGCTATCA +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIGIINL*FMLQLS
Trigger: TGATAGCTGTAGCATGAAGCAGAGGTTGATGATGCC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR GCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTCTCTTTCTAACTGCTaGACTCACTCCACTGGTGAA +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGISLSNC*THSTGE
Trigger: TTCACCAGTGGAGTGAGTGCAGCAGTTAGAAAGAGA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACGGTTGGAGACAAATTTaGTCACAGAGGTATCTGAGG +
Preference number: 2 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDGWRQI*SQRYLR
Trigger: CCTCAGATACCTCTGTGACCAAATTTGTCTCCAACC...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACATCTTTGATCATGTTTaGAAGGGCCTCAGGGATAAC +
Preference number: 2 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDIFDHV*KGLRDN
Trigger: GTTATCCCTGAGGCCCTTTCAAACATGATCAAAGAT...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACAAAGTCAGGAATGGGTaGAATTTGGAGGGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNKVRNG*NLEGRN
Trigger: ATTTCTTCCCTCCAAATTTCACCCATTCCTGACTTT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACAGAAATCAGAGGAGCTaGCCAGTTAATGCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDRNQRS*PVNAEN
Trigger: ATTCTCAGCATTAACTGGCCAGCTCCTCTGATTTCT...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCCCCTTTTCTTCAATGTaGCAGGTAACTTGTTCTGAT +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIPFSSM*QVTCSD
Trigger: ATCAGAACAAGTTACCTGTCACATTGAAGAAAAGGG...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCATAAAGACGGCATTATaGCACTACCTCCTGCATTTT +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIIKTAL*HYLLHF
Trigger: AAAATGCAGGAGGTAGTGTCATAATGCCGTCTTTAT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCAGAGATGCAGAACAATaGACAACCTGTTTCATGAAC +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIRDAEQ*TTCFMN
Trigger: GTTCATGAAACAGGTTGTTCATTGTTCTGCATCTCT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCATCAGTTCTACTTTATaGGACAAGCAGCTTCATGGA +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIISSTL*DKQLHG
Trigger: TCCATGAAGCTGCTTGTCTCATAAAGTAGAACTGAT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTGTGATGGTACGCCTTaGAAAACTAATCAAGTGCTT +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGICDGTP*KTNQVL
Trigger: AAGCACTTGATTAGTTTTTCAAGGCGTACCATCACA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR GCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCAAAGACATGCCATTGTaGGTGGTTTACTCAACAACA +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIKDMPL*VVYSTT
Trigger: TGTTGTTGAGTAAACCACGCACAATGGCATGTCTTT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTTTATAGTTCTGGCATaGCAATGTCATTGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIFIVLA*QCHCSW
Trigger: CCAACTACAATGACATTGTCATGCCAGAACTATAAA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR GCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTCCCTATTAAGGAAATaGAGGGGACATTACAATTTG +
Preference number: 2 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDSLLRK*RGHYNL
Trigger: CAAATTGTAATGTCCCCTGCATTTCCTTAATAGGGA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCAATTACATGCTGTTGTaGGGTAAATTAGGGGATTTG +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGINYMLL*GKLGDL
Trigger: CAAATCCCCTAATTTACCCCACAACAGCATGTAATT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR GCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTCGAACCTGTTGCGATaGTGCAGAAATCAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLSNLLR*CRNQRS
Trigger: GCTCCTCTGATTTCTGCAGCATCGCAACAGGTTCGA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGTTTTACTAAAGCATTaGGAGATACTTAGTAACAGG +
Preference number: 2 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIVLLKH*EILSNR
Trigger: CCTGTTACTAAGTATCTCCCAATGCTTTAGTAAAAC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR CAA 90 bp ATGAACACAAGGTTATACACTATGATTAACTCACCACTGCACCAGTaGCACAATATTGCTTCTCTTTCTAACTGCTGCACTCACTCCACT +
Preference number: 2 (lower is better)
Translates to: MNTRLYTMINSPLHQ*HNIASLSNCCTHST
Trigger: AGTGGAGTGAGTGCAGCAGTTAGAAAGAGAAGCAATATTGTGCAACTGGTGCAGTGGTGAGTTAATCATAGTGTATAACCTTGTGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR CAA 90 bp ATTCTCTCTCTACAGGAAATGAGAAAACATCTCAACCATAGGCTGTaGATACAAAGAACTCTGCAGGAAAGCATCTTTGTGATGGTACGC +
Preference number: 2 (lower is better)
Translates to: ILSLQEMRKHLNHRL*IQRTLQESIFVMVR
Trigger: GCGTACCATCACAAAGATGCTTTCCTGCAGAGTTCTTTGTATCAACAGCCTATGGTTGAGATGTTTTCTCATTTCCTGTAGAGAGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGGCTTGAGTAAAATTTaGCTAAGTAACCCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLGLSKI*LSNPSR
Trigger: TCTGGAAGGGTTACTTAGCCAAATTTTACTCAAGCC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTCATGTCCTTCTCTATaGCAAGCATCTCTTTCTTAC +
Preference number: 2 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLSCPSL*QASLSY
Trigger: GTAAGAAAGAGATGCTTGCCATAGAGAAGGACATGA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGCCAAGTTGTTCTTTCTaGCCACTTTCCTTTCTACAA +
Preference number: 2 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLPSCSF*PLSFLQ
Trigger: TTGTAGAAAGGAAAGTGGCCAGAAAGAACAACTTGG...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTTTATAGTAGAAGGATaGCAAAGACACCTATCTGGT +
Preference number: 2 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLFIVEG*QRHLSG
Trigger: ACCAGATAGGTGTCTTTGTCATCCTTCTACTATAAA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR TCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGAACAACCTGTTTCATaGACACAAGGTTATACACTA +
Preference number: 2 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLEQPVS*TQGYTL
Trigger: TAGTGTATAACCTTGTGTTCATGAAACAGGTTGTTC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR GCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGCCAGTGTACTCAATTTaGAGCTTAAAGAACATCATA +
Preference number: 2 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLPVYSI*SLKNII
Trigger: TATGATGTTCTTTAAGCTGCAAATTGAGTACACTGG...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACCCATCTTCGAACCTGTaGCGATGCTGCAGAAATCAG +
Preference number: 3 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNPSSNL*RCCRNQ
Trigger: CTGATTTCTGCAGCATCGCAACAGGTTCGAAGATGG...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR GCA 72 bp CTGCACCAGTTGCACAATATTGCTTCTCTTTCTAACTaGTGCACTCACTCCACTGGTGAAGAGACAGACAGG +
Preference number: 3 (lower is better)
Translates to: LHQLHNIASLSN*CTHSTGEETDR
Trigger: CCTGTCTGTCTCTTCACCAGTGGAGTGAGTGCAGCAGTTAGAAAGAGAAGCAATATTGTGCAACTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACAAGAAAGACATGCCATaGTGCGTGGTTTACTCAACA +
Preference number: 3 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNKKDMP*CVVYST
Trigger: TGTTGAGTAAACCACGCACAATGGCATGTCTTTCTT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACCCTGCATTTCTGCAATaGATTCAAAGTCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNPAFLQ*IQSQEW
Trigger: CCATTCCTGACTTTGAATCAATTGCAGAAATGCAGG...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCCTCAACCATAGGCTGTaGATACAAAGAACTCTGCAG +
Preference number: 3 (lower is better)
Translates to: LKDVSHYFHNQLERNQGILNHRL*IQRTLQ
Trigger: CTGCAGAGTTCTTTGTATCAACAGCCTATGGTTGAG...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACCAGCTCCTAATTGGCTaGAGTAAAATTTGGCTAAGT +
Preference number: 3 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNQLLIG*SKIWLS
Trigger: ACTTAGCCAAATTTTACTCAAGCCAATTAGGAGCTG...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCCAGGCTTCATCAAATTaGTTGATTCCCAGTGTACTC +
Preference number: 3 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIQASSN*LIPSVL
Trigger: GAGTACACTGGGAATCAACAAATTTGATGAAGCCTG...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGCTTCATCAAATTTGTaGATTCCCAGTGTACTCAAT +
Preference number: 3 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIASSNL*IPSVLN
Trigger: ATTGAGTACACTGGGAATCAACAAATTTGATGAAGC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR TCA 72 bp TATGTGGTTGGAGACAAATTTGGTCACAGAGGTATCTaGGGCACCGAGTTAGAGCAATGTAAACATCAAACC +
Preference number: 3 (lower is better)
Translates to: YVVGDKFGHRGI*GTELEQCKHQT
Trigger: GGTTTGATGTTTACATTGCTCTAACTCGGTGCCTCAGATACCTCTGTGACCAAATTTGTCTCCAACCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR CCA 72 bp ATTATAGGAAATGAGCTATGTGGTTGGAGACAAATTTaGTCACAGAGGTATCTGAGGCACCGAGTTAGAGCA +
Preference number: 3 (lower is better)
Translates to: IIGNELCGWRQI*SQRYLRHRVRA
Trigger: TGCTCTAACTCGGTGCCTCAGATACCTCTGTGACCAAATTTGTCTCCAACCACATAGCTCATTTCCTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR TCA 72 bp TTAGCTTACAGTTTTCTATCTTCATGGCACAGGCATTaGGATAATGAAGAGCATCCCAGAGGAAACACCATG +
Preference number: 3 (lower is better)
Translates to: LAYSFLSSWHRH*DNEEHPRGNTM
Trigger: CATGGTGTTTCCTCTGGGATGCTCTTCATTATCTCAATGCCTGTGCCATGAAGATAGAAAACTGTAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR TCA 72 bp CAGAATTTGCTAATAATCCTTGTAGACAAAGTCAGCTaGAGGATGTTAGCCATTACTTCCACAACCAGCTGG +
Preference number: 3 (lower is better)
Translates to: QNLLIILVDKVS*RMLAITSTTSW
Trigger: CCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAGCTGACTTTGTCTACAAGGATTATTAGCAAATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTCACCACTGCACCAGTaGCACAATATTGCTTCTCTT +
Preference number: 3 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLSPLHQ*HNIASL
Trigger: AAGAGAAGCAATATTGTGCAACTGGTGCAGTGGTGA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR TCA 72 bp ACTGGTGAAGAGACAGACAGGCTTCATCAAATTTGTTaGTTCCCAGTGTACTCAATTTGCAGCTTAAAGAAC +
Preference number: 3 (lower is better)
Translates to: TGEETDRLHQIC*FPVYSICSLKN
Trigger: GTTCTTTAAGCTGCAAATTGAGTACACTGGGAATCAACAAATTTGATGAAGCCTGTCTGTCTCTTCACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR TCA 72 bp TTTCTTTATTCGGACTCAAAATCGACCTTTGAAGTATaGCCTTCTCCAGGTTCTGCTGTATTTAAGGGCACA +
Preference number: 3 (lower is better)
Translates to: FLYSDSKSTFEV*PSPGSAVFKGT
Trigger: TGTGCCCTTAAATACAGCAGAACCTGGAGAAGGTCATACTTCAAAGGTCGATTTTGAGTCCGAATAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR CCA 72 bp GAGGATAAATCACTAAGCTATTTAATGACCTACTCATaGTCCCAAGTTGTTCTTTCTGGCCACTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: EDKSLSYLMTYS*SQVVLSGHFPF
Trigger: GAAAGGAAAGTGGCCAGAAAGAACAACTTGGGACCATGAGTAGGTCATTAAATAGCTTAGTGATTTATCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGATTTTGGTGGGGTTCTaGATGTTCAGTTTCTATGTA +
Preference number: 3 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWILVGF*MFSFYV
Trigger: TACATAGAAACTGAACATCAAGAACCCCACCAAAAT...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGCACATTGGGAAATCTTaGATCATGTTTGAAAGGGCC +
Preference number: 3 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLHIGKS*IMFERA
Trigger: GGCCCTTTCAAACATGATCAAAGATTTCCCAATGTG...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR TCA 72 bp ATGTATAAGAGCTCAACACCTTCCCCAGAAATAAGCTaGCATCACCTTGGTCAAAGATCCAGAAGAAAATAT +
Preference number: 3 (lower is better)
Translates to: MYKSSTPSPEIS*HHLGQRSRRKY
Trigger: ATATTTTCTTCTGGATCTTTGACCAAGGTGATGTCAGCTTATTTCTGGGGAAGGTGTTGAGCTCTTATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGAAAGTTCACCAAAATTaGCCACAGCAGTGGCAATAT +
Preference number: 3 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLKVHQN*PQQWQY
Trigger: ATATTGCCACTGCTGTGGCAAATTTTGGTGAACTTT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGACCAGTTGCACAATATaGCTTCTCTTTCTAACTGCT +
Preference number: 3 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLTSCTI*LLFLTA
Trigger: AGCAGTTAGAAAGAGAAGCAATATTGTGCAACTGGT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR GCA 72 bp AAAATTTGCCACAGCAGTGGCAATATAACTTGTTCCTaGTCACTTTCCTTCCAGAAGAAACATCTTAAATGT +
Preference number: 3 (lower is better)
Translates to: KICHSSGNITCS*SLSFQKKHLKC
Trigger: ACATTTAAGATGTTTCTTCTGGAAGGAAAGTGAGCAGGAACAAGTTATATTGCCACTGCTGTGGCAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTTTACAGGAATAGTCTaGCAATTATGGGCATCATCA +
Preference number: 3 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLFTGIV*QLWASS
Trigger: TGATGATGCCCATAATTGCAAGACTATTCCTGTAAA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR CCA 72 bp ATAATTGTTATTTTTACAGGAATAGTCTTGCAATTATaGGCATCATCAACCTCTGCTTCATGCTACAGCTAT +
Preference number: 3 (lower is better)
Translates to: IIVIFTGIVLQL*ASSTSASCYSY
Trigger: ATAGCTGTAGCATGAAGCAGAGGTTGATGATGCCCATAATTGCAAGACTATTCCTGTAAAAATAACAATTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCACCTGTGGCTCCGGATaGGTCCAAGGCCGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGITCGSG*VQGRAV
Trigger: GACCGCCCGGCCTTGGACCCATCCGGAGCCACAGGT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTGCTCCACAGGGCGATaGGCACGGGGACAGCTACTT +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGICSTGR*ARGQLL
Trigger: AAGTAGCTGTCCCCGTGCTCATCGCCCTGTGGAGCA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACCCTGCGAAGTTTCCTTaGCGGGAGAGCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNPAKFP*RESRCQ
Trigger: CTGACACCTGCTCTCCCGGCAAGGAAACTTCGCAGG...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACCTTGGTCGGTCAGCCTaGGAAGTTTCCTTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDLGRSA*EVSLPG
Trigger: TCCCGGCAAGGAAACTTCGCAGGCTGACCGACCAAG...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGCCAGTTCCCGAGCTTaGCGTTCATTGACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIASSRA*RSLTSL
Trigger: GAGGGAAGTCAATGAACGGCAAGCTCGGGAACTGGC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCCACTCACTCCACTGGTaGAGAGACAGACAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIHSLHW*RDRQAS
Trigger: TGAAGCCTGTCTGTCTCTTCACCAGTGGAGTGAGTG...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACACTTCCACAACCAGCTaGAAAGGAACCAGGGAATCC +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNTSTTS*KGTRES
Trigger: GGATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACCGAGGGCCAGGAGTTTaGTCAGATAATCATAGTCTC +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNRGPGV*SDNHSL
Trigger: GAGACTATGATTATCTGATCAAACTCCTGGCCCTCG...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTCATTGACTTCCCTCTaGTCTGGTAGGTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDSLTSL*SGRSAL
Trigger: CAAGGCAGACCTACCAGATCAGAGGGAAGTCAATGA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACGAGCTTGCCGTTCATTaGCTTCCCTCTGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDELAVH*LPSDLV
Trigger: TACCAGATCAGAGGGAAGTCAATGAACGGCAAGCTC...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTCGAACCTGTTGCGATaGTGCAGAAATCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDSNLLR*CRNQRS
Trigger: GCTCCTCTGATTTCTGCAGCATCGCAACAGGTTCGA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACGGGACAAGAAAAGGCTaGTTAAAACTCTCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDGTRKG*LKLSPG
Trigger: ACCAGGCGAGAGTTTTAATCAGCCTTTTCTTGTCCC...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTCCCCAGAAATAAGCTaGCATCACCTTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDSPEIS*HHLGQR
Trigger: TCTTTGACCAAGGTGATGTCAGCTTATTTCTGGGGA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACAGGAAAGCATCTTTGTaGTGGTACGCCTTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNRKASL*WYALKN
Trigger: GTTTTTCAAGGCGTACCATCACAAAGATGCTTTCCT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACGGCATCATCAACCTCTaGTTCATGCTACAGCTATCA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDGIINL*FMLQLS
Trigger: TGATAGCTGTAGCATGAAGCAGAGGTTGATGATGCC...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACACATTTCTTCTCTGGTaGCTTTTCCCCATCCAAGTT +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNTFLLW*LFPIQV
Trigger: AACTTGGATGGGGAAAAGCCACCAGAGAAGAAATGT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACAGAAATCAGAGGAGCTaGCCAGTTAATGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNRNQRS*PVNAEN
Trigger: ATTCTCAGCATTAACTGGCCAGCTCCTCTGATTTCT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGGTTGGAGACAAATTTaGTCACAGAGGTATCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIGWRQI*SQRYLR
Trigger: CCTCAGATACCTCTGTGACCAAATTTGTCTCCAACC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTTTAAATGCTTTCCCTaGAGATCCATTCGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIFKCFP*RSIRSL
Trigger: CAAGGACCGAATGGATCTTCAGGGAAAGCATTTAAA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGGCTCATCCAGTTTCTaGCATTTAAGAAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIGSSSF*HLRSSV
Trigger: AACAGAGCTTCTTAAATGTCAGAAACTGGATGAGCC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCCAGAATTTCCACCATTaGCAGTATCAGGGATTTGTG +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIQNFHH*QYQGFV
Trigger: CACAAATCCCTGATACTGTCAATGGTGGAAATTCTG...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACCCCTTTTCTTCAATGTaGCAGGTAACTTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNPFSSM*QVTCSD
Trigger: ATCAGAACAAGTTACCTGTCACATTGAAGAAAAGGG...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACCTGCATTTCTGCAATTaGTTCAAAGTCAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDLHFCN*FKVRNG
Trigger: CCCATTCCTGACTTTGAATCAATTGCAGAAATGCAG...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCCAAGGTTATACACTATaGTTAACTCACCACTGCACC +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIQGYTL*LTHHCT
Trigger: GGTGCAGTGGTGAGTTAATCATAGTGTATAACCTTG...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGTAGACAAAGTCAGCTaGAGGATGTTAGCCATTACT +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIVDKVS*RMLAIT
Trigger: AGTAATGGCTAACATCCTTCAGCTGACTTTGTCTAC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCCACCACTGCACCAGTTaGACAATATTGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIHHCTS*TILLLF
Trigger: AAAGAGAAGCAATATTGTGCAACTGGTGCAGTGGTG...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGATCTCCTCCAACCTGTaGCTCCGGATGGGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLISSNL*LRMGPR
Trigger: CCTTGGACCCATCCGGAGCCACAGGTTGGAGGAGAT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCATTAAAACTCTCGCCTaGTTCATCTACCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIIKTLA*FIYLYR
Trigger: CCTGTACAGGTAGATGAACCAGGCGAGAGTTTTAAT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTCTCTTACAAGGCTATaGACACAGAAGCCCTATTTG +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGISLTRL*TQKPYL
Trigger: CAAATAGGGCTTCTGTGTCCATAGCCTTGTAAGAGA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTTTAAGAAGCTCTGTTaGCTGGTGAGGTCAAACATT +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDFKKLC*LVRSNI
Trigger: AATGTTTGACCTCACCAGTCAACAGAGCTTCTTAAA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGTTCCATTCGCTTCATaGTTAAGTCCAAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIVPFAS*LSPKGF
Trigger: AAACCCTTTTGGACTTAATCATGAAGCGAATGGAAC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACATAAAGACGGCATTATaGCACTACCTCCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDIKTAL*HYLLHF
Trigger: AAAATGCAGGAGGTAGTGTCATAATGCCGTCTTTAT...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACATCAGTTCTACTTTATaGGACAAGCAGCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDISSTL*DKQLHG
Trigger: TCCATGAAGCTGCTTGTCTCATAAAGTAGAACTGAT...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCACAGAAGCCACTGATTaGATAAGGGATCCATTAAGT +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGITEATD*IRDPLS
Trigger: ACTTAATGGATCCCTTATTCAATCAGTGGCTTCTGT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACAAAGACAGAAGCCACTaGTTGAATAAGGGATCCATT +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDKDRSH*LNKGSI
Trigger: AATGGATCCCTTATTCAATCAGTGGCTTCTGTCTTT...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACTTCAATCAAATACAATaGCTTCAAGTTGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNFNQIQ*LQVAFP
Trigger: TGGGAAGGCAACTTGAAGTCATTGTATTTGATTGAA...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACACTGTTGGGATACAATaGAGCACTTCAGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNTVGIQ*STSVLY
Trigger: ATATAACACTGAAGTGCTTCATTGTATCCCAACAGT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTCCATTCGGTCCTTGTaGATTATAAACCACACGTTT +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGISIRSL*IINHTF
Trigger: AAACGTGTGGTTTATAATGCACAAGGACCGAATGGA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGGGCGTCTCTGAAAAATaGAGTGGTGAGACTCCGGAA +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWGVSEK*SGETPE
Trigger: TTCCGGAGTCTCACCACTGCATTTTTCAGAGACGCC...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTTCACAATAAGCATTTaGTTGCAGTTGGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDFTISI*LQLAHP
Trigger: TGGATGAGCCAACTGCAAGCAAATGCTTATTGTGAA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACAAAGACATGCCATTGTaGGTGGTTTACTCAACAACA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDKDMPL*VVYSTT
Trigger: TGTTGTTGAGTAAACCACGCACAATGGCATGTCTTT...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACAATATAACTTGTTCCTaGTCACTTTCCTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNNITCS*SLSFQK
Trigger: CTTCTGGAAGGAAAGTGAGCAGGAACAAGTTATATT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGCCAGAGGAAACACCATaGGAGGGAATACCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLPEETP*EGIPSH
Trigger: GTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGG...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACCCAAGTTGTTCTTTCTaGCCACTTTCCTTTCTACAA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDPSCSF*PLSFLQ
Trigger: TTGTAGAAAGGAAAGTGGCCAGAAAGAACAACTTGG...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGTCATGGCACAGGCATTaGGATAATGAAGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWSWHRH*DNEEHP
Trigger: GGGATGCTCTTCATTATCTCAATGCCTGTGCCATGA...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGGTCACAGAGGTATCTaGGGCACCGAGTTAGAGCAA +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLGHRGI*GTELEQ
Trigger: TTGCTCTAACTCGGTGCCTCAGATACCTCTGTGACC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTTCTCTGCCAATCCTTaGCTTCTTATCATTATCAGA +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIFSANP*LLIIIR
Trigger: TCTGATAATGATAAGAAGTCAAGGATTGGCAGAGAA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACGAACAACCTGTTTCATaGACACAAGGTTATACACTA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDEQPVS*TQGYTL
Trigger: TAGTGTATAACCTTGTGTTCATGAAACAGGTTGTTC...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTGGTGTAATATGCAATaGGGAAAGAATTGTGTATCC +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIWCNMQ*GKNCVS
Trigger: GGATACACAATTCTTTCCTCATTGCATATTACACCA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGGATTTATAAAGCATTaGAATGACACTCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIGFIKH*NDTHPR
Trigger: TCTGGGATGAGTGTCATTTCAATGCTTTATAAATCC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTTTATAGTTCTGGCATaGCAATGTCATTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDFIVLA*QCHCSW
Trigger: CCAACTACAATGACATTGTCATGCCAGAACTATAAA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACCACATTCTGTCCAGTTaGTGCACTTGTTTCAAAATA +
Preference number: 4 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDHILSS*CTCFKI
Trigger: TATTTTGAAACAAGTGCAGCAACTGGACAGAATGTG...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCAAGTTCACCAAAATTTaGCACAGCAGTGGCAATATA +
Preference number: 4 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIKFTKI*HSSGNI
Trigger: TATATTGCCACTGCTGTGGCAAATTTTGGTGAACTT...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACGTTTTACTAAAGCATTaGGAGATACTTAGTAACAGG +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNVLLKH*EILSNR
Trigger: CCTGTTACTAAGTATCTCCCAATGCTTTAGTAAAAC...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACACTCTTCTATCACTTTaGCAAATATCAGCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNTLLSL*QISALR
Trigger: TCTAAGAGCTGATATTTGCCAAAGTGATAGAAGAGT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACAGCCCTATTTGTACATaGAATATTTTGACCAACTTG +
Preference number: 4 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNSPICT*NILTNL
Trigger: CAAGTTGGTCAAAATATTCCATGTACAAATAGGGCT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGAACCTGTTGCGATGCTaGAGAAATCAGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLNLLRC*RNQRSW
Trigger: CCAGCTCCTCTGATTTCTGCAGCATCGCAACAGGTT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGAATGACCTAACAGTGTaGGTCAGGAACCACAGTCTA +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWNDLTV*VRNHSL
Trigger: TAGACTGTGGTTCCTGACGCACACTGTTAGGTCATT...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGCAGTGTCCCAAAGCTaGAGATGCACTTTAAATGCT +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLAVSQS*RCTLNA
Trigger: AGCATTTAAAGTGCATCTTCAGCTTTGGGACACTGC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGTGTGATGGTACGCCTTaGAAAACTAATCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWCDGTP*KTNQVL
Trigger: AAGCACTTGATTAGTTTTTCAAGGCGTACCATCACA...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTCAACCATAGGCTGTTaGTACAAAGAACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLSTIGC*YKELCR
Trigger: CCTGCAGAGTTCTTTGTATCAACAGCCTATGGTTGA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGCATTTGCTTGCAGTTaGCTCATCCAGTTTCTGACA +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLAFACS*LIQFLT
Trigger: TGTCAGAAACTGGATGAGCCAACTGCAAGCAAATGC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGACATGCCATTGTGCGTaGTTTACTCAACAACAATTG +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWTCHCA*FTQQQL
Trigger: CAATTGTTGTTGAGTAAACCACGCACAATGGCATGT...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGTCATGTCCTTCTCTATaGCAAGCATCTCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWSCPSL*QASLSY
Trigger: GTAAGAAAGAGATGCTTGCCATAGAGAAGGACATGA...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGAAGCTGACATCACCTTaGTCAAAGATCCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWKLTSP*SKIQKK
Trigger: TTTCTTCTGGATCTTTGACCAAGGTGATGTCAGCTT...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
3UTR CAA 72 bp AGGTTATACACTATGATTAACTCACCACTGCACCAGTaGCACAATATTGCTTCTCTTTCTAACTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RLYTMINSPLHQ*HNIASLSNCCT
Trigger: AGTGCAGCAGTTAGAAAGAGAAGCAATATTGTGCAACTGGTGCAGTGGTGAGTTAATCATAGTGTATAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTTCATAAGAAGTAAGTaGGGAGACCAAGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLFIRSK*GDQEKA
Trigger: TGCCTTCTCTTGGTCTCCTCACTTACTTCTTATGAA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGTTTATAGTAGAAGGATaGCAAAGACACCTATCTGGT +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWFIVEG*QRHLSG
Trigger: ACCAGATAGGTGTCTTTGTCATCCTTCTACTATAAA...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGAGAAAAAGAAAGACATaGCATTGTGCGTGGTTTACT +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWRKRKT*HCAWFT
Trigger: AGTAAACCACGCACAATGGCATGTCTTTCTTTTTCT...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGCACAGGCTCAACTCTTaGCGTTTAGTATTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLHRLNS*RLVFSL
Trigger: CAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTG...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGCAATGTCATTGTAGTTaGGTCTCCACCCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLQCHCS*VSTQKF
Trigger: GAATTTCTGGGTGGAGACCCAACTACAATGACATTG...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGTTAATGACCTACTCATaGTCCCAAGTTGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWLMTYS*SQVVLS
Trigger: AGAAAGAACAACTTGGGACCATGAGTAGGTCATTAA...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGTTGAAGGTAAACTGTTaGGATACAATGAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWLKVNC*DTMKHF
Trigger: GAAGTGCTTCATTGTATCCCAACAGTTTACCTTCAA...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGAGAGATGCAGAACAATaGACAACCTGTTTCATGAAC +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLRDAEQ*TTCFMN
Trigger: GTTCATGAAACAGGTTGTTCATTGTTCTGCATCTCT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGACAATGACTTCAAGTTaGCTTCCCATTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWTMTSS*LPIFSF
Trigger: AAAACTGAAAATGGGAAGGCAACTTGAAGTCATTGT...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGAATTTGCCACAGCAGTaGCAATATAACTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLNLPQQ*QYNLFL
Trigger: CAGGAACAAGTTATATTGCCACTGCTGTGGCAAATT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGAATGAGCTATGTGGTTaGAGACAAATTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLNELCG*RQIWSQ
Trigger: CTGTGACCAAATTTGTCTCCAACCACATAGCTCATT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR TCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGAAAATCCTTTACGAATaGGGATTTTTCCCTCAAACG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLKILYE*GFFPQT
Trigger: CGTTTGAGGGAAAAATCCTCATTCGTAAAGGATTTT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGTAGGTCTGCCTTGTTaGCAATTAATACTATATCTG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLVGLPC*QLILYL
Trigger: CAGATATAGTATTAATTGGCAACAAGGCAGACCTAC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGATTCTGTCCAGTTGCTaGACTTGTTTCAAAATATGG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLILSSC*TCFKIW
Trigger: CCATATTTTGAAACAAGTGCAGCAACTGGACAGAAT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTCCCTATTAAGGAAATaGAGGGGACATTACAATTTG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLSLLRK*RGHYNL
Trigger: CAAATTGTAATGTCCCCTGCATTTCCTTAATAGGGA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR GCA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGTCAACCTCTGCTTCATaGTACAGCTATCAAATAATG +
Preference number: 4 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLSTSAS*YSYQIM
Trigger: CATTATTTGATAGCTGTAGCATGAAGCAGAGGTTGA...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS CCA 90 bp GAGCACGGGGACAGCTACTTATCTCCTCCAACCTGTGGCTCCGGATaGGTCCAAGGCCGGGCGGTCCGCAGCCCCTGCCCGTCAGGACTG +
Preference number: 5 (lower is better)
Translates to: EHGDSYLSPPTCGSG*VQGRAVRSPCPSGL
Trigger: CAGTCCTGACGGGCAGGGGCTGCGGACCGCCCGGCCTTGGACCCATCCGGAGCCACAGGTTGGAGGAGATAAGTAGCTGTCCCCGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262094.10
ENST00000586594.1
CDS TCA 90 bp CATTTGCTTGCAGTTGGCCGCTCTTGTCCCGCAGTGTCCCAAAGCTaGAGATGCACTTTAAATGCTTTCCCTGAAGATCCATTCGGTCCT +
Preference number: 5 (lower is better)
Translates to: HLLAVGRSCPAVSQS*RCTLNAFPEDPFGP
Trigger: AGGACCGAATGGATCTTCAGGGAAAGCATTTAAAGTGCATCTTCAGCTTTGGGACACTGCGGGACAAGAGCGGCCAACTGCAAGCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586594.1
CDS CCA 90 bp GATGGTCTTGGTCGGTACCTCCAAACGCCTCCAGATTGCAGCCTCTaGAAATATCTAGCCCATTTCTTTATGGCACTGTTGCTTCGATCA +
Preference number: 5 (lower is better)
Translates to: DGLGRYLQTPPDCSL*KYLAHFFMALLLRS
Trigger: TGATCGAAGCAACAGTGCCATAAAGAAATGGGCTAGATATTTCCAGAGGCTGCAATCTGGAGGCGTTTGGAGGTACCGACCAAGACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586570.5
CDS-3UTR CAA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGACTCCGGAACCGCTCTaGTCCCGCAGTGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWTPEPL*SRSVPK
Trigger: CTTTGGGACACTGCGGGACAAGAGCGGTTCCGGAGT...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACAGCATTTGCTTGCAGTaGGCTCATCCAGTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNSICLQ*AHPVSD
Trigger: GTCAGAAACTGGATGAGCCAACTGCAAGCAAATGCT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCTATGGTATGCCATATTaGTCAGCCAGTTCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIYGMPY*SASSRA
Trigger: AGCTCGGGAACTGGCTGACAAATATGGCATACCATA...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGACAGTATCAGGGATTaGTGTCTTCTCCACACACTG +
Preference number: 5 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIDSIRD*CLLHTL
Trigger: CAGTGTGTGGAGAAGACACAAATCCCTGATACTGTC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACCTCAACCATAGGCTGTaGATACAAAGAACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNLNHRL*IQRTLQ
Trigger: CTGCAGAGTTCTTTGTATCAACAGCCTATGGTTGAG...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS TCA 90 bp ATGGTATGCCATATTTGTCAGCCAGTTCCCGAGCTTGCCGTTCATTaGCTTCCCTCTGATCTGGTAGGTCTGCCTTGTTGCCAATTAATA +
Preference number: 5 (lower is better)
Translates to: MVCHICQPVPELAVH*LPSDLVGLPCCQLI
Trigger: TATTAATTGGCAACAAGGCAGACCTACCAGATCAGAGGGAAGTCAATGAACGGCAAGCTCGGGAACTGGCTGACAAATATGGCATACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS TCA 90 bp ATTTGCAGCCATATTTGTCAGCCAGTTCCCGAGCTTGCCGTTCATTaGCTTCCCTCTGATCTGGTAGGTCTGCCTTGTTGCCAATTAATA +
Preference number: 5 (lower is better)
Translates to: ICSHICQPVPELAVH*LPSDLVGLPCCQLI
Trigger: TATTAATTGGCAACAAGGCAGACCTACCAGATCAGAGGGAAGTCAATGAACGGCAAGCTCGGGAACTGGCTGACAAATATGGCTGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592334.1
CDS-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGCCTGCGAAGTTTCCTaGCCGGGAGAGCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLACEVS*PGEQVS
Trigger: TGACACCTGCTCTCCCGGCAAGGAAACTTCGCAGGC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACACAATAAGCATTTGCTaGCAGTTGGCTCATCCAGTT +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNTISIC*QLAHPV
Trigger: AACTGGATGAGCCAACTGCAAGCAAATGCTTATTGT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACTTTCACAATAAGCATTaGCTTGCAGTTGGCTCATCC +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNFHNKH*LAVGSS
Trigger: GGATGAGCCAACTGCAAGCAAATGCTTATTGTGAAA...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGAGCCAGTTCCCGAGCTaGCCGTTCATTGACTTCCCT +
Preference number: 5 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWSQFPS*PFIDFP
Trigger: AGGGAAGTCAATGAACGGCAAGCTCGGGAACTGGCT...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACCCACATTCTGTCCAGTaGCTGCACTTGTTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNPHSVQ*LHLFQN
Trigger: ATTTTGAAACAAGTGCAGCAACTGGACAGAATGTGG...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTGGTTGGAGACAAATTaGGTCACAGAGGTATCTGAG +
Preference number: 5 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDWLETN*VTEVSE
Trigger: CTCAGATACCTCTGTGACCAAATTTGTCTCCAACCA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCCCACAGGCTCAACTCTaGGCGTTTAGTATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIPQAQL*AFSIFS
Trigger: AGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGG...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACACTCAAAATCGACCTTaGAAGTATGACCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNTQNRP*KYDLLQ
Trigger: CTGGAGAAGGTCATACTTCAAAGGTCGATTTTGAGT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACTTATACATATCTCCTTaGAGCCTGACACGAACTCTG +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNLYISP*SLTRTL
Trigger: CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAA...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS TCA 90 bp TATTTGTCAGCCAGTTCCCGAGCTTGCCGTTCATTGACTTCCCTCTaGTCTGGTAGGTCTGCCTTGTTGCCAATTAATACTATATCTGGA +
Preference number: 5 (lower is better)
Translates to: YLSASSRACRSLTSL*SGRSALLPINTISG
Trigger: TCCAGATATAGTATTAATTGGCAACAAGGCAGACCTACCAGATCAGAGGGAAGTCAATGAACGGCAAGCTCGGGAACTGGCTGACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262094.10
ENST00000592334.1
CDS TCA 90 bp TCTCTGGTGGCTTTTCCCCATCCAAGTTTCCAGAATTTCCACCATTaGCAGTATCAGGGATTTGTGTCTTCTCCACACACTGTTCCATTC +
Preference number: 5 (lower is better)
Translates to: SLVAFPHPSFQNFHH*QYQGFVSSPHTVPF
Trigger: GAATGGAACAGTGTGTGGAGAAGACACAAATCCCTGATACTGTCAATGGTGGAAATTCTGGAAACTTGGATGGGGAAAAGCCACCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CTGAAGGATGTTAGCCATTACTTCCACAACCAGCTGGAAAGGAACCAGGGAATCGTCCAGTTGCTGCACTaGTTTCAAAATATGGTATGC +
Preference number: 5 (lower is better)
Translates to: LKDVSHYFHNQLERNQGIVQLLH*FQNMVC
Trigger: GCATACCATATTTTGAAACAAGTGCAGCAACTGGAC...GATTCCCTGGTTCCTTTCCAGCTGGTTGTGGAAGTAATGGCTAACATCCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACAAGAAAGACATGCCATaGTGCGTGGTTTACTCAACA +
Preference number: 5 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDKKDMP*CVVYST
Trigger: TGTTGAGTAAACCACGCACAATGGCATGTCTTTCTT...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACCACATTGGGAAATCTTaGATCATGTTTGAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDHIGKS*IMFERA
Trigger: GGCCCTTTCAAACATGATCAAAGATTTCCCAATGTG...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACCAGGCTTCATCAAATTaGTTGATTCCCAGTGTACTC +
Preference number: 5 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDQASSN*LIPSVL
Trigger: GAGTACACTGGGAATCAACAAATTTGATGAAGCCTG...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS TCA 90 bp TCCCGCAGTGTCCCAAAGCTGAAGATGCACTTTAAATGCTTTCCCTaGAGATCCATTCGGTCCTTGTGCATTATAAACCACACGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SRSVPKLKMHFKCFP*RSIRSLCIINHTFF
Trigger: GAAAAACGTGTGGTTTATAATGCACAAGGACCGAATGGATCTTCAGGGAAAGCATTTAAAGTGCATCTTCAGCTTTGGGACACTGCGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262094.10
ENST00000586570.5
ENST00000586594.1
CDS-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGTCATAGTGATGGTCTaGGTCGGTCAGCCTGCGAAG +
Preference number: 5 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLVIVMV*VGQPAK
Trigger: CTTCGCAGGCTGACCGACCAAGACCATCACTATGAC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACATTTTGGTGGGGTTCTaGATGTTCAGTTTCTATGTA +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNILVGF*MFSFYV
Trigger: TACATAGAAACTGAACATCAAGAACCCCACCAAAAT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACTTTACAGGAATAGTCTaGCAATTATGGGCATCATCA +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNFTGIV*QLWASS
Trigger: TGATGATGCCCATAATTGCAAGACTATTCCTGTAAA...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACCCCAGTGTACTCAATTaGCAGCTTAAAGAACATCAT +
Preference number: 5 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDPSVLN*QLKEHH
Trigger: ATGATGTTCTTTAAGCTGCAAATTGAGTACACTGGG...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACACCAGTTGCACAATATaGCTTCTCTTTCTAACTGCT +
Preference number: 5 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDTSCTI*LLFLTA
Trigger: AGCAGTTAGAAAGAGAAGCAATATTGTGCAACTGGT...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACTTGCTCCTACAGAATTaGCTAATAATCCTTGTAGAC +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNLLLQN*LIILVD
Trigger: GTCTACAAGGATTATTAGCAAATTCTGTAGGAGCAA...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp ATAATGAAGAGCATCCCAGAGGAAACACCATGGGAGGGAATACCCAGCCACAACACACAGAAGCCCTATTaGTACATGGAATATTTTGAC +
Preference number: 5 (lower is better)
Translates to: IMKSIPEETPWEGIPSHNTQKPY*YMEYFD
Trigger: GTCAAAATATTCCATGTACAAATAGGGCTTCTGTGT...GTTGTGGCTGGGTATTCCCTCCCATGGTGTTTCCTCTGGGATGCTCTTCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp GAGACCCACAGGCTCAACTCTTGGCGTTTAGTATTTTCTCTGCCAATCCTTGACTTTCTCTGCCAATCCTaGACTTCTTATCATTATCAG +
Preference number: 5 (lower is better)
Translates to: ETHRLNSWRLVFSLPILDFLCQS*TSYHYQ
Trigger: CTGATAATGATAAGAAGTCAAGGATTGGCAGAGAAA...GTCAAGGATTGGCAGAGAAAATACTAAACGCCAAGAGTTGAGCCTGTGGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS TCA 90 bp AACAACTCCACTGGTGAAGAGACAGACAGGCTTCATCAAATTTGTTaGTTCCCAGTGTACTCAATTTGCAGCCATATTTGTCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: NNSTGEETDRLHQIC*FPVYSICSHICQPV
Trigger: AACTGGCTGACAAATATGGCTGCAAATTGAGTACACTGGGAATCAACAAATTTGATGAAGCCTGTCTGTCTCTTCACCAGTGGAGTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592334.1
CDS-3UTR CAA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGTCACCACTGCACCAGTaGCACAATATTGCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWSPLHQ*HNIASL
Trigger: AAGAGAAGCAATATTGTGCAACTGGTGCAGTGGTGA...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGCCAGAATTTCCACCATaGACAGTATCAGGGATTTGT +
Preference number: 5 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWPEFPP*TVSGIC
Trigger: ACAAATCCCTGATACTGTCAATGGTGGAAATTCTGG...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGAGATCCATTCGGTCCTaGTGCATTATAAACCACACG +
Preference number: 5 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLRSIRS*CIINHT
Trigger: CGTGTGGTTTATAATGCACAAGGACCGAATGGATCT...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGGGTAGGTCTGCCTTGTaGCCAATTAATACTATATCT +
Preference number: 5 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWGRSAL*PINTIS
Trigger: AGATATAGTATTAATTGGCAACAAGGCAGACCTACC...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGCTTGAAGGTAAACTGTaGGGATACAATGAAGCACTT +
Preference number: 5 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWLEGKL*GYNEAL
Trigger: AAGTGCTTCATTGTATCCCAACAGTTTACCTTCAAG...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGCCTGCATTTCTGCAATaGATTCAAAGTCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLPAFLQ*IQSQEW
Trigger: CCATTCCTGACTTTGAATCAATTGCAGAAATGCAGG...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGCAGTGGCAATATAACTaGTTCCTGCTCACTTTCCTT +
Preference number: 5 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLQWQYN*FLLTFL
Trigger: AAGGAAAGTGAGCAGGAACAAGTTATATTGCCACTG...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp CAGAAAAAGAAAGACATGCCATTGTGCGTGGTTTACTCAACAACAATTGTGTGGGCTTCATCAAATTTGTaGATTCCCAGTGTACTCAAT +
Preference number: 5 (lower is better)
Translates to: QKKKDMPLCVVYSTTIVWASSNL*IPSVLN
Trigger: ATTGAGTACACTGGGAATCAACAAATTTGATGAAGC...CCACACAATTGTTGTTGAGTAAACCACGCACAATGGCATGTCTTTCTTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGTAACAGGACATATCTaGGCTAAAATTACATGCTGT +
Preference number: 5 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLVTGHI*AKITCC
Trigger: ACAGCATGTAATTTTAGCCAAGATATGTCCTGTTAC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGAAAATGATAGCAAATaGGATAAAGTGGTAACTGGC +
Preference number: 5 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLENDSK*DKVVTG
Trigger: GCCAGTTACCACTTTATCCAATTTGCTATCATTTTC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS-3UTR CAA 90 bp AATTTACAAACCACTTTCTTATACATATCTCCTTTGAGCCTGACACGAACTCTGGGCATAAACCTCTACTaGGTAGAAGAAAATGAACAA +
Preference number: 5 (lower is better)
Translates to: NLQTTFLYISPLSLTRTLGINLY*VEENEQ
Trigger: TTGTTCATTTTCTTCTACCAAGTAGAGGTTTATGCC...CAGAGTTCGTGTCAGGCTCAAAGGAGATATGTATAAGAAAGTGGTTTGTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS CCA 72 bp GACAGCTACTTATCTCCTCCAACCTGTGGCTCCGGATaGGTCCAAGGCCGGGCGGTCCGCAGCCCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: DSYLSPPTCGSG*VQGRAVRSPCP
Trigger: CGGGCAGGGGCTGCGGACCGCCCGGCCTTGGACCCATCCGGAGCCACAGGTTGGAGGAGATAAGTAGCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262094.10
ENST00000586594.1
CDS CCA 72 bp GGTCGGTACCTCCAAACGCCTCCAGATTGCAGCCTCTaGAAATATCTAGCCCATTTCTTTATGGCACTGTTG +
Preference number: 6 (lower is better)
Translates to: GRYLQTPPDCSL*KYLAHFFMALL
Trigger: CAACAGTGCCATAAAGAAATGGGCTAGATATTTCCAGAGGCTGCAATCTGGAGGCGTTTGGAGGTACCGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586570.5
CDS GCA 72 bp GATGGTCTTGGTCGGTACCTCCAAACGCCTCCAGATTaGAGCCTCTGGAAATATCTAGCCCATTTCTTTATG +
Preference number: 6 (lower is better)
Translates to: DGLGRYLQTPPD*SLWKYLAHFFM
Trigger: CATAAAGAAATGGGCTAGATATTTCCAGAGGCTGCAATCTGGAGGCGTTTGGAGGTACCGACCAAGACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586570.5
CDS CAA 90 bp TTCTCTGGTGGCTTTTCCCCATCCAAGTTTCCAGAATTTCCACCATaGACAGTATCAGGGATTTGTGTCTTCTCCACACACTGTTCCATT +
Preference number: 6 (lower is better)
Translates to: FSGGFSPSKFPEFPP*TVSGICVFSTHCSI
Trigger: AATGGAACAGTGTGTGGAGAAGACACAAATCCCTGATACTGTCAATGGTGGAAATTCTGGAAACTTGGATGGGGAAAAGCCACCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262094.10
CDS CAA 72 bp CTCTGGAAATATCTAGCCCATTTCTTTATGGCACTGTaGCTTCGATCAGCTTCTAATCGAACAGAAGGGGGA +
Preference number: 6 (lower is better)
Translates to: LWKYLAHFFMAL*LRSASNRTEGG
Trigger: TCCCCCTTCTGTTCGATTAGAAGCTGATCGAAGCAACAGTGCCATAAAGAAATGGGCTAGATATTTCCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586570.5
CDS TCA 72 bp ACTGGTGAAGAGACAGACAGGCTTCATCAAATTTGTTaGTTCCCAGTGTACTCAATTTGCAGCCATATTTGT +
Preference number: 6 (lower is better)
Translates to: TGEETDRLHQIC*FPVYSICSHIC
Trigger: ACAAATATGGCTGCAAATTGAGTACACTGGGAATCAACAAATTTGATGAAGCCTGTCTGTCTCTTCACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592334.1