Pregenerated sensors for RAB25 (Homo sapiens)
Ensembl gene IDs: ENSG00000132698Ensembl transcript IDs: ENST00000361084.10, ENST00000463614.1, ENST00000473336.5, ENST00000487325.5, ENST00000497968.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGAGGGTGCTGTaGACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: VFVIGHEDLKTLRVL*TGNSLISGTKGQGK Trigger: CTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCACAGCACCCTCAGGGTCTTAAGGTCTTCATGCCCTATCACAAATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTACCCTGAGGGTGCTGTaGACAGGGAACAGTCTGATA | + |
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Preference number: 2 (lower is better) Translates to: SVRGGQIKEVFVIGHEDLTLRVL*TGNSLI Trigger: TATCAGACTGTTCCCTGTTCACAGCACCCTCAGGGT...AAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACCCCTCACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| 3UTR-3UTR TCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGGAACAGGGAACAGTCTaGTATCTGGAACCAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLEQGTV*YLEPKG Trigger: GCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTC...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| 3UTR-3UTR TCA 90 bp | CTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTAAGACCTTAAGACCCTaGGGGTGCTGTGAACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LYLRVLVCEGWTDKRGICKTLRP*GCCEQG Trigger: TCCCTGTTCACAGCACCCTCAGGGTCTTAAGGTCTT...ACAAATACCTCTTTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| 3UTR TCA 72 bp | ATAGGGCATGAAGACCTTAAGACCCTGAGGGTGCTGTaGACAGGGAACAGTCTGATATCTGGAACCAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: IGHEDLKTLRVL*TGNSLISGTKG Trigger: CCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCACAGCACCCTCAGGGTCTTAAGGTCTTCATGCCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGGCCAGTGGGGGCAGGTaGTGCTGGCCAAGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGASGGR*CWPRSE Trigger: CTCTGACCTTGGCCAGCACCACCTGCCCCCACTGGC...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGGCTGTGTCCCAGATCTaGGCCTTGACAGCAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGAVSQI*ALTAAV Trigger: CACCGCTGCTGTCAAGGCTCAGATCTGGGACACAGC...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGGGTAGAGTCCAGGGCTaGGGTCTCCAGGAAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGGRVQG*GLQEEQ Trigger: CTGCTCTTCCTGGAGACCTCAGCCCTGGACTCTACC...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGATCAGCTCTGGCAGGTaGGGGTGCTGTAAGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGISSGR*GCCKEA Trigger: TGCTTCCTTACAGCACCCCCACCTGCCAGAGCTGAT...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGTTCCATTCCCCATCTTaGCTCCGCATGGAGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGFHSPS*LRMEGA Trigger: TGCACCCTCCATGCGGAGCCAAGATGGGGAATGGAA...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | CTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTTTCGGGCCTCCTCAGTaGGCACTTCCCGGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LYLRVLVCEGWTDKRGICFGPPQ*ALPGPG Trigger: GCCAGGCCCGGGAAGTGCCCACTGAGGAGGCCCGAA...ACAAATACCTCTTTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | TCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTGGGCACTGCCCAGAGTaGTGGCATTGGTCCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SVRGGQIKEVFVIGHEDLGHCPE*WHWSGC Trigger: GCATCCGGACCAATGCCATCACTCTGGGCAGTGCCC...AAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACCCCTCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR GCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGTGTGTGTTGGCTCAATaGCCTCAACCCTCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGCVLAQ*PQPSAL Trigger: GAGAGCTGAGGGTTGAGGGCATTGAGCCAACACACA...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR GCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGCAGGAGGGCCCCCACTaGACCACGATAGTACGCCGA | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLQEGPH*TTIVRR Trigger: TCGGCGTACTATCGTGGTGCAGTGGGGGCCCTCCTG...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR GCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGTGGCATTGGTCCGGATaGTGTTCTGTCTCTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGWHWSG*CSVSAW Trigger: CCAAGCAGAGACAGAACAGCATCCGGACCAATGCCA...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGCCCAGATCTGAGCCTTaGCAGCAGCGGTGCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLPRSEP*QQRCPT Trigger: TGTTGGGCACCGCTGCTGTCAAGGCTCAGATCTGGG...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGGATAGTACGCCGAGGTaGTGGCTCGGTACCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLDSTPR*WLGTAP Trigger: TGGAGCGGTACCGAGCCATCACCTCGGCGTACTATC...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGAGCTCTCAAAAGATCTaGTCCTGCCCCTCCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGSSQKI*SCPSSH Trigger: ATGAGAGGAGGGGCAGGACCAGATCTTTTGAGAGCT...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | TCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTGTGGTGCGGCTGTCGTaGCTGAACTCATTGCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: SVRGGQIKEVFVIGHEDLVVRLS*LNSLRV Trigger: CACGCGCAATGAGTTCAGCCACGACAGCCGCACCAC...AAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACCCCTCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGCTTCCCGGGCCTGGCTaGGGTCACTTTTGTTACCCA | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLLPGPG*GHFCYP Trigger: TGGGTAACAAAAGTGACCTCAGCCAGGCCCGGGAAG...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | TCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTCATCTTGGCTCCGCATaGAGGGTGCAGGTGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SVRGGQIKEVFVIGHEDLHLGSA*RVQVSS Trigger: CGAAGACACCTGCACCCTCCATGCGGAGCCAAGATG...AAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACCCCTCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGCATAGGTCTGGTGCTTaGTTAGGTCAAACACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VNREQSDIWNQRARKGPGHRSGA*LGQTPG Trigger: TCCTGGTGTTTGACCTAACCAAGCACCAGACCTATG...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR GCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGCAAAAGATCTGGTCCTaGCCCTCCTCTCATTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLQKIWS*PSSHWG Trigger: CCCCCAATGAGAGGAGGGGCAGGACCAGATCTTTTG...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR GCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGTGCCCAACATCACAGTaGGGGTGGAGAACTCAACCC | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLCPTSQ*GWRTQP Trigger: GGGTTGAGTTCTCCACCCGCACTGTGATGTTGGGCA...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GATATAAAACAGCTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAAAGAACTCAACCCCGATaGTGGTGCGGCTGTCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: DIKQLYLRVLVCEGWTDKRTQPR*WCGCRG Trigger: GCCACGACAGCCGCACCACCATCGGGGTTGAGTTCT...TTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAGCTGTTTTATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | TCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTGGCACTTCCCGGGCCTaGCTGAGGTCACTTTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: SVRGGQIKEVFVIGHEDLGTSRA*LRSLLL Trigger: TAACAAAAGTGACCTCAGCCAGGCCCGGGAAGTGCC...AAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACCCCTCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGAAGACCTTAAGACCCTaGGGGTGCTGTGAACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLKTLRP*GCCEQG Trigger: TCCCTGTTCACAGCACCCTCAGGGTCTTAAGGTCTT...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GATATAAAACAGCTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAATGTTACCCACGAGCATaGCGACGATCGTGGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: DIKQLYLRVLVCEGWTDKCYPRA*RRSWLQ Trigger: CTGAAGCCACGATCGTCGTCATGCTCGTGGGTAACA...TTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAGCTGTTTTATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GATATAAAACAGCTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAAACATCACAGTGCGGGTaGAGAACTCAACCCCGATGG | + |
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Preference number: 4 (lower is better) Translates to: DIKQLYLRVLVCEGWTDKTSQCG*RTQPRW Trigger: CCATCGGGGTTGAGTTCTCCACCCGCACTGTGATGT...TTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAGCTGTTTTATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | CTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGAACAGGGAACAGTCTaGTATCTGGAACCAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LYLRVLVCEGWTDKRGICEQGTV*YLEPKG Trigger: GCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTC...ACAAATACCTCTTTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GATATAAAACAGCTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAAACCCTGAGGGTGCTGTaGACAGGGAACAGTCTGATA | + |
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Preference number: 4 (lower is better) Translates to: DIKQLYLRVLVCEGWTDKTLRVL*TGNSLI Trigger: TATCAGACTGTTCCCTGTTCACAGCACCCTCAGGGT...TTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAGCTGTTTTATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR GCA 90 bp | TCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTATGCTGTTCTGTCTCTaGTTGGACACCTTCGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SVRGGQIKEVFVIGHEDLMLFCL*LDTFAK Trigger: CTTTGCGAAGGTGTCCAAGCAGAGACAGAACAGCAT...AAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACCCCTCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGGACAAATCTGTGTGTTaGCTCAATGCCCTCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLDKSVC*LNALNP Trigger: AGGGTTGAGGGCATTGAGCCAACACACAGATTTGTC...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGTGTTCTGTCTCTGCTTaGACACCTTCGCAAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLCSVSA*TPSQRF Trigger: AAATCTTTGCGAAGGTGTCCAAGCAGAGACAGAACA...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR TCA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGCGATCAGCACCACCTTaGAGACAAAGTTATAATCTT | + |
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Preference number: 4 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLRSAPP*RQSYNL Trigger: AAGATTATAACTTTGTCTTCAAGGTGGTGCTGATCG...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CCA 90 bp | CTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTCTAGTCTGTGAGGGGTaGACAGATAAAAGAGGTATT | + |
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Preference number: 4 (lower is better) Translates to: LYLRVLVCEGWTDKRGICLVCEG*TDKRGI Trigger: AATACCTCTTTTATCTGTCCACCCCTCACAGACTAG...ACAAATACCTCTTTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS CCA 90 bp | ACAGTGCGGGTGGAGAACTCAACCCCGATGGTGGTGCGGCTGTCGTaGCTGAACTCATTGCGCGTGAATCGGGAGAGTAGATTGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TVRVENSTPMVVRLS*LNSLRVNRESRLVF Trigger: GAAGACCAATCTACTCTCCCGATTCACGCGCAATGAGTTCAGCCACGACAGCCGCACCACCATCGGGGTTGAGTTCTCCACCCGCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361084.10 ENST00000463614.1 |
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| CDS CCA 90 bp | GAGGGTGCAGGTGTCTTCGGGGACAGAGGCGACAAATCTGTGTGTTaGCTCAATGCCCTCAACCCTCAGCTCTCAAAAGATCTGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: EGAGVFGDRGDKSVC*LNALNPQLSKDLVL Trigger: CAGGACCAGATCTTTTGAGAGCTGAGGGTTGAGGGCATTGAGCCAACACACAGATTTGTCGCCTCTGTCCCCGAAGACACCTGCACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000463614.1 ENST00000487325.5 |
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| CDS-3UTR CAA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGGTTCCATTCCCCATCTaGGCTCCGCATGGAGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: VNREQSDIWNQRARKGPGVPFPI*APHGGC Trigger: GCACCCTCCATGCGGAGCCAAGATGGGGAATGGAAC...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGTGGCTGAGGTCACTTTaGTTACCCACGAGCATGACG | + |
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Preference number: 5 (lower is better) Translates to: VNREQSDIWNQRARKGPGWLRSL*LPTSMT Trigger: CGTCATGCTCGTGGGTAACAAAAGTGACCTCAGCCA...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS GCA 90 bp | GCACTGCCCAGAGTGATGGCATTGGTCCGGATGCTGTTCTGTCTCTaGTTGGACACCTTCGCAAAGATTTCTTTCAGGACAGTCTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: ALPRVMALVRMLFCL*LDTFAKISFRTVSK Trigger: CTTTGAGACTGTCCTGAAAGAAATCTTTGCGAAGGTGTCCAAGCAGAGACAGAACAGCATCCGGACCAATGCCATCACTCTGGGCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000473336.5 ENST00000497968.1 |
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| CDS CCA 90 bp | AAAGTTATAATCTTCCTCAGTTCCATTCCCCATCTTGGCTCCGCATaGAGGGTGCAGGTGTCTTCGGGGACAGAGGCGACAAATCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: KVIIFLSSIPHLGSA*RVQVSSGTEATNLC Trigger: ACACAGATTTGTCGCCTCTGTCCCCGAAGACACCTGCACCCTCCATGCGGAGCCAAGATGGGGAATGGAACTGAGGAAGATTATAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000463614.1 ENST00000487325.5 |
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| CDS-3UTR CAA 90 bp | GTGAACAGGGAACAGTCTGATATCTGGAACCAAAGGGCAAGGAAAGGTCCTGGGCTGTTCTGTCTCTGCTaGGACACCTTCGCAAAGATT | + |
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Preference number: 5 (lower is better) Translates to: VNREQSDIWNQRARKGPGLFCLC*DTFAKI Trigger: AATCTTTGCGAAGGTGTCCAAGCAGAGACAGAACAG...CCCAGGACCTTTCCTTGCCCTTTGGTTCCAGATATCAGACTGTTCCCTGTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGTCGTGGCTGAACTCATaGCGCGTGAATCGGGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLSWLNS*RVNRES Trigger: ACTCTCCCGATTCACGCGCAATGAGTTCAGCCACGA...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | GATATAAAACAGCTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAACTGCAGCCAGAGGGATaGGGGGCCAACTCAAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: DIKQLYLRVLVCEGWTDKLQPEG*GANSRL Trigger: TAACCTTGAGTTGGCCCCCAATCCCTCTGGCTGCAG...TTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAGCTGTTTTATATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | TCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAATCGGGAGAGTAGATaGGTCTTCCCCACACCTGAT | + |
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Preference number: 5 (lower is better) Translates to: SVRGGQIKEVFVIGHEDLNRESR*VFPTPD Trigger: ATCAGGTGTGGGGAAGACCAATCTACTCTCCCGATT...AAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACCCCTCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | GATATAAAACAGCTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAACCCAGAGTGATGGCATaGGTCCGGATGCTGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: DIKQLYLRVLVCEGWTDKPRVMA*VRMLFC Trigger: ACAGAACAGCATCCGGACCAATGCCATCACTCTGGG...TTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAGCTGTTTTATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | GATATAAAACAGCTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAACGACAAATCTGTGTGTaGGCTCAATGCCCTCAACCC | + |
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Preference number: 5 (lower is better) Translates to: DIKQLYLRVLVCEGWTDKRQICV*AQCPQP Trigger: GGGTTGAGGGCATTGAGCCAACACACAGATTTGTCG...TTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAGCTGTTTTATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | GGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTAAGACCCTGAGGAAGAGCAGTCCATaGTTTTCAGCGAACATTCGG | + |
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Preference number: 5 (lower is better) Translates to: GGQIKEVFVIGHEDLKTLRKSSP*FSANIR Trigger: CCGAATGTTCGCTGAAAACAATGGACTGCTCTTCCT...CAGGGTCTTAAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | GATATAAAACAGCTTTATTTGAGGGTCCTAGTCTGTGAGGGGTGGACAGATAAAAAGGCTAGCTCAACATaGGTAGAGTCCAGGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DIKQLYLRVLVCEGWTDKKASST*VESRAE Trigger: CTCAGCCCTGGACTCTACCAATGTTGAGCTAGCCTT...TTTATCTGTCCACCCCTCACAGACTAGGACCCTCAAATAAAGCTGTTTTATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS-3UTR CAA 90 bp | TCTGTGAGGGGTGGACAGATAAAAGAGGTATTTGTGATAGGGCATGAAGACCTTATAAAACAGCTTTATTaGAGGGTCCTAGTCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SVRGGQIKEVFVIGHEDLIKQLY*RVLVCE Trigger: CTCACAGACTAGGACCCTCAAATAAAGCTGTTTTAT...AAGGTCTTCATGCCCTATCACAAATACCTCTTTTATCTGTCCACCCCTCACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361084.10 |
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| CDS CCA 72 bp | TCAGCCATCGCTCCACCACAGCATAGGTCTGGTGCTTaGTTAGGTCAAACACCAGGAGGGCCCCCACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: SAIAPPQHRSGA*LGQTPGGPPLH Trigger: GTGCAGTGGGGGCCCTCCTGGTGTTTGACCTAACCAAGCACCAGACCTATGCTGTGGTGGAGCGATGGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000361084.10 ENST00000473336.5 ENST00000487325.5 ENST00000497968.1 |
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| CDS CAA 72 bp | ACCCCGATGGTGGTGCGGCTGTCGTGGCTGAACTCATaGCGCGTGAATCGGGAGAGTAGATTGGTCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: TPMVVRLSWLNS*RVNRESRLVFP Trigger: GGGGAAGACCAATCTACTCTCCCGATTCACGCGCAATGAGTTCAGCCACGACAGCCGCACCACCATCGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361084.10 ENST00000463614.1 |
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| CDS CCA 72 bp | GTGGAGAACTCAACCCCGATGGTGGTGCGGCTGTCGTaGCTGAACTCATTGCGCGTGAATCGGGAGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: VENSTPMVVRLS*LNSLRVNRESR Trigger: TCTACTCTCCCGATTCACGCGCAATGAGTTCAGCCACGACAGCCGCACCACCATCGGGGTTGAGTTCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361084.10 ENST00000463614.1 |
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| CDS CAA 90 bp | GAGAACTCAACCCCGATGGTGGTGCGGCTGTCGTGGCTGAACTCATaGCGCGTGAATCGGGAGAGTAGATTGGTCTTCCCCACACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ENSTPMVVRLSWLNS*RVNRESRLVFPTPD Trigger: ATCAGGTGTGGGGAAGACCAATCTACTCTCCCGATTCACGCGCAATGAGTTCAGCCACGACAGCCGCACCACCATCGGGGTTGAGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361084.10 ENST00000463614.1 |
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| CDS CAA 90 bp | GGAGGGTGCAGGTGTCTTCGGGGACAGAGGCGACAAATCTGTGTGTaGGCTCAATGCCCTCAACCCTCAGCTCTCAAAAGATCTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GGCRCLRGQRRQICV*AQCPQPSALKRSGP Trigger: AGGACCAGATCTTTTGAGAGCTGAGGGTTGAGGGCATTGAGCCAACACACAGATTTGTCGCCTCTGTCCCCGAAGACACCTGCACCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000463614.1 ENST00000487325.5 |
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| CDS GCA 72 bp | CGGGGACAGAGGCGACAAATCTGTGTGTTGGCTCAATaGCCTCAACCCTCAGCTCTCAAAAGATCTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RGQRRQICVLAQ*PQPSALKRSGP Trigger: AGGACCAGATCTTTTGAGAGCTGAGGGTTGAGGGCATTGAGCCAACACACAGATTTGTCGCCTCTGTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000463614.1 ENST00000487325.5 |
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| CDS CCA 72 bp | GGTGTCTTCGGGGACAGAGGCGACAAATCTGTGTGTTaGCTCAATGCCCTCAACCCTCAGCTCTCAAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: GVFGDRGDKSVC*LNALNPQLSKD Trigger: ATCTTTTGAGAGCTGAGGGTTGAGGGCATTGAGCCAACACACAGATTTGTCGCCTCTGTCCCCGAAGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000463614.1 ENST00000487325.5 |
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| CDS CAA 72 bp | AGGTGTCTTCGGGGACAGAGGCGACAAATCTGTGTGTaGGCTCAATGCCCTCAACCCTCAGCTCTCAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: RCLRGQRRQICV*AQCPQPSALKR Trigger: TCTTTTGAGAGCTGAGGGTTGAGGGCATTGAGCCAACACACAGATTTGTCGCCTCTGTCCCCGAAGACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000463614.1 ENST00000487325.5 |
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| CDS CAA 90 bp | CTGCCCAGAGTGATGGCATTGGTCCGGATGCTGTTCTGTCTCTGCTaGGACACCTTCGCAAAGATTTCTTTCAGGACAGTCTCAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LPRVMALVRMLFCLC*DTFAKISFRTVSKA Trigger: AGCCTTTGAGACTGTCCTGAAAGAAATCTTTGCGAAGGTGTCCAAGCAGAGACAGAACAGCATCCGGACCAATGCCATCACTCTGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000473336.5 ENST00000497968.1 |
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| CDS CAA 72 bp | GTGATGGCATTGGTCCGGATGCTGTTCTGTCTCTGCTaGGACACCTTCGCAAAGATTTCTTTCAGGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: VMALVRMLFCLC*DTFAKISFRTV Trigger: GACTGTCCTGAAAGAAATCTTTGCGAAGGTGTCCAAGCAGAGACAGAACAGCATCCGGACCAATGCCATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000473336.5 ENST00000497968.1 |
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| CDS GCA 72 bp | AGAGTGATGGCATTGGTCCGGATGCTGTTCTGTCTCTaGTTGGACACCTTCGCAAAGATTTCTTTCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: RVMALVRMLFCL*LDTFAKISFRT Trigger: TGTCCTGAAAGAAATCTTTGCGAAGGTGTCCAAGCAGAGACAGAACAGCATCCGGACCAATGCCATCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361084.10 ENST00000473336.5 ENST00000497968.1 |
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