Pregenerated sensors for RAB1A (Homo sapiens)
Ensembl gene IDs: ENSG00000138069Ensembl transcript IDs: ENST00000409784.8, ENST00000409892.5, ENST00000494188.1, ENST00000649427.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACTGGCGTGTGAACTGAGCAGGATGGGGTCTGGGGCGACCTCCTaGGTTTGGACGTGTCCTGTTAGCGACAGAGTGATTGAGGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: PLACELSRMGSGATS*VWTCPVSDRVIEGF Trigger: GAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAACCCAGGAGGTCGCCCCAGACCCCATCCTGCTCAGTTCACACGCCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR TCA 90 bp | CTGGGGCGACCTCCTGGGTTTGGACGTGTCCTGTTAGCGACAGAGTaGTTGAGGGTTTCATCTGCCAGGAGACGCTTCTCAGAGGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: LGRPPGFGRVLLATE*LRVSSARRRFSEVR Trigger: CCTTACCTCTGAGAAGCGTCTCCTGGCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAACCCAGGAGGTCGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR TCA 90 bp | GAACCAGTCATTCTGCTAGTGTTCAGTTACCACTGGCGTGTGAACTaGGCAGGATGGGGTCTGGGGCGACCTCCTGGGTTTGGACGTGTC | + |
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Preference number: 1 (lower is better) Translates to: EPVILLVFSYHWRVN*AGWGLGRPPGFGRV Trigger: GACACGTCCAAACCCAGGAGGTCGCCCCAGACCCCATCCTGCTCAGTTCACACGCCAGTGGTAACTGAACACTAGCAGAATGACTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR CCA 90 bp | TACATCTGGAAGGTGGCAAAGTTAGGGGCTGGCCTCAGGTTTGTCTaGCTCCAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: YIWKVAKLGAGLRFV*LQNPCPSTLCCPAS Trigger: GGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTGGAGCCAGACAAACCTGAGGCCAGCCCCTAACTTTGCCACCTTCCAGATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR CCA 90 bp | GTGAGGCTCGAAGTCATACATCTGGAAGGTGGCAAAGTTAGGGGCTaGCCTCAGGTTTGTCTGGCTCCAAAACCCATGTCCTTCAACACT | + |
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Preference number: 1 (lower is better) Translates to: VRLEVIHLEGGKVRG*PQVCLAPKPMSFNT Trigger: AGTGTTGAAGGACATGGGTTTTGGAGCCAGACAAACCTGAGGCCAGCCCCTAACTTTGCCACCTTCCAGATGTATGACTTCGAGCCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR GCA 90 bp | GTTTGGACGTGTCCTGTTAGCGACAGAGTGATTGAGGGTTTCATCTaGCAGGAGACGCTTCTCAGAGGTAAGGGACTGTTTTCCAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: VWTCPVSDRVIEGFI*QETLLRGKGLFSSF Trigger: GAAGCTGGAAAACAGTCCCTTACCTCTGAGAAGCGTCTCCTGGCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR CCA 90 bp | TGCTTTGCACACATGGGTGTATTTAATCCTTACCTTCTGAGGAGCTaGTGCTATGAGGGGAGGAAAGTGAGGCTCGAAGTCATACATCTG | + |
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Preference number: 1 (lower is better) Translates to: CFAHMGVFNPYLLRS*CYEGRKVRLEVIHL Trigger: CAGATGTATGACTTCGAGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTAAGGATTAAATACACCCATGTGTGCAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR GCA 90 bp | TTTGCACACATGGGTGTATTTAATCCTTACCTTCTGAGGAGCTGGTaGTATGAGGGGAGGAAAGTGAGGCTCGAAGTCATACATCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: FAHMGVFNPYLLRSW*YEGRKVRLEVIHLE Trigger: TTCCAGATGTATGACTTCGAGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTAAGGATTAAATACACCCATGTGTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR GCA 90 bp | GCAGGATGGGGTCTGGGGCGACCTCCTGGGTTTGGACGTGTCCTGTTAGCGACAATTGAGGGTTTCATCTaGCAGGAGACGCTTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: AGWGLGRPPGFGRVLLATIEGFI*QETLLR Trigger: TCTGAGAAGCGTCTCCTGGCAGATGAAACCCTCAAT...TGTCGCTAACAGGACACGTCCAAACCCAGGAGGTCGCCCCAGACCCCATCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTCATGACAGAGCTGTCTaGGTTCTGCTTGCTCACACC | + |
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Preference number: 2 (lower is better) Translates to: SKTHVLQHCAVLLPSGVSHDRAV*VLLAHT Trigger: GGTGTGAGCAAGCAGAACTCAGACAGCTCTGTCATG...ACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR GCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCGAGCTGTCTGAGTTCTaGTTGCTCACACCCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: QNPCPSTLCCPASLGGEFELSEF*LLTPWI Trigger: TATCCAGGGTGTGAGCAAGCAGAACTCAGACAGCTC...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR TCA 90 bp | ACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTTCATTTCCAGCTTCAGCATaGCAGAGCTGTCTGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: THVLQHCAVLLPSGVSSSFPASA*QSCLSS Trigger: AGAACTCAGACAGCTCTGTCATGCTGAAGCTGGAAA...TGAAGAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGGTTTGGACGTGTCCTGTTAGCGACAGAGTGATTGAGGGTTTCATCTGCTGTCTGAGTTCTGCTTaGTCACACCCTGGATACCTT | + |
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Preference number: 2 (lower is better) Translates to: SWVWTCPVSDRVIEGFICCLSSA*SHPGYL Trigger: AAGGTATCCAGGGTGTGAGCAAGCAGAACTCAGACA...GCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAACCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR TCA 90 bp | TTCGTTAAGCTCTTACCATGTGCTTTGCACACATGGGTGTATTTAATCCTTACCGAGGAGCTGGTGCTATaGGGGGAGGAAAGTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FVKLLPCALHTWVYLILTEELVL*GEESEA Trigger: AGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTC...GGTAAGGATTAAATACACCCATGTGTGCAAAGCACATGGTAAGAGCTTAACGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR GCA 90 bp | ATCTGCCAGGAGACGCTTCTCAGAGGTAAGGGACTGTTTTCCAGCTTCAGCATGCACTTGGGTTCAGATTaGAAATTCATTGCTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: ICQETLLRGKGLFSSFSMHLGSD*KFIAVR Trigger: TCTCACAGCAATGAATTTGCAATCTGAACCCAAGTG...CATGCTGAAGCTGGAAAACAGTCCCTTACCTCTGAGAAGCGTCTCCTGGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR CCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCCCACGGGAAACAGTCTaGTATCAGGAAAGCAACAAG | + |
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Preference number: 2 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIPRETV*YQESNK Trigger: CTTGTTGCTTTCCTGATACCAGACTGTTTCCCGTGG...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| 3UTR-3UTR GCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCCACTTGGGTTCAGATTaGAAATTCATTGCTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIHLGSD*KFIAVR Trigger: TCTCACAGCAATGAATTTGCAATCTGAACCCAAGTG...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| 3UTR-3UTR GCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCGCAAATACTGGATGCTaGTCTAAGATAGGTCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIANTGC*SKIGLE Trigger: TTCTAGACCTATCTTAGAGCAGCATCCAGTATTTGC...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| 3UTR-3UTR GCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCAAAGCAAATACTGGATaGTGCTCTAAGATAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIKANTG*CSKIGL Trigger: TAGACCTATCTTAGAGCAGCATCCAGTATTTGCTTT...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| 3UTR TCA 72 bp | CCTCCTGGGTTTGGACGTGTCCTGTTAGCGACAGAGTaGTTGAGGGTTTCATCTGCCAGGAGACGCTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: PPGFGRVLLATE*LRVSSARRRFS Trigger: TGAGAAGCGTCTCCTGGCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAACCCAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR GCA 72 bp | TTTGTCTGGCTCCAAAACCCATGTCCTTCAACACTGTaGTGTCCTGCTTCCCTCGGGGGTGAGTTCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: FVWLQNPCPSTL*CPASLGGEFFI Trigger: GATGAAGAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTGGAGCCAGACAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR CCA 72 bp | GAAGTCATACATCTGGAAGGTGGCAAAGTTAGGGGCTaGCCTCAGGTTTGTCTGGCTCCAAAACCCATGTCC | + |
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Preference number: 3 (lower is better) Translates to: EVIHLEGGKVRG*PQVCLAPKPMS Trigger: GGACATGGGTTTTGGAGCCAGACAAACCTGAGGCCAGCCCCTAACTTTGCCACCTTCCAGATGTATGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR-3UTR CAA 90 bp | CCTTACCTTCTGAGGAGCTGGTGCTATGAGGGGAGGAAAGTGAGGCTCGAAGTCTCACTTGGGTTCAGATaGCAAATTCATTGCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PYLLRSWCYEGRKVRLEVSLGFR*QIHCCE Trigger: CTCACAGCAATGAATTTGCAATCTGAACCCAAGTGA...GACTTCGAGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR CCA 72 bp | CACATGGGTGTATTTAATCCTTACCTTCTGAGGAGCTaGTGCTATGAGGGGAGGAAAGTGAGGCTCGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: HMGVFNPYLLRS*CYEGRKVRLEV Trigger: GACTTCGAGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTAAGGATTAAATACACCCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR TCA 72 bp | GGGACTGTTTTCCAGCTTCAGCATGACAGAGCTGTCTaGGTTCTGCTTGCTCACACCCTGGATACCTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: GTVFQLQHDRAV*VLLAHTLDTLK Trigger: TTTTAAGGTATCCAGGGTGTGAGCAAGCAGAACTCAGACAGCTCTGTCATGCTGAAGCTGGAAAACAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR GCA 72 bp | ATGGGTGTATTTAATCCTTACCTTCTGAGGAGCTGGTaGTATGAGGGGAGGAAAGTGAGGCTCGAAGTCATA | + |
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Preference number: 3 (lower is better) Translates to: MGVFNPYLLRSW*YEGRKVRLEVI Trigger: TATGACTTCGAGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTAAGGATTAAATACACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR CCA 72 bp | CCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTaGGCATATTATCTAGAAAGCAAATACTGGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: PTQHRSPSRSCY*AYYLESKYWML Trigger: CAGCATCCAGTATTTGCTTTCTAGATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| 3UTR-3UTR CAA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCTCACTTGGGTTCAGATaGCAAATTCATTGCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: KSLHSTEAPLGHVIGHIISLGFR*QIHCCE Trigger: CTCACAGCAATGAATTTGCAATCTGAACCCAAGTGA...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| 3UTR-3UTR CAA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCACACAAATGGCTGTGTaGAATATAATGCAAGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: KSLHSTEAPLGHVIGHIITQMAV*NIMQGS Trigger: AGAGCCTTGCATTATATTCAACACAGCCATTTGTGT...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| 3UTR-3UTR CAA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCCTAGAATACCTTAGTTaGCATTGTGCACACACAAAT | + |
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Preference number: 3 (lower is better) Translates to: KSLHSTEAPLGHVIGHIILEYLS*HCAHTN Trigger: ATTTGTGTGTGCACAATGCAAACTAAGGTATTCTAG...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| CDS-3UTR TCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCCCGCAGCCGCCGCCCTaGCTCTCCGCGCCACGGGTA | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFPQPPP*LSAPRV Trigger: TACCCGTGGCGCGGAGAGTCAGGGCGGCGGCTGCGG...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCGGCGGCCGCACCGCCTaGCATGCCGGGAAAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFGGRTA*HAGKGS Trigger: ACTCCCTTTCCCGGCATGCCAGGCGGTGCGGCCGCC...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTGGGGCATGCGTACCTaGAGGGTTGTCGCCCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFWGMRT*RVVARP Trigger: GGGGCGGGCGACAACCCTTCAGGTACGCATGCCCCA...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCCGCGGCTACGCGAGCTaGGGACAGACAGTGCGACGC | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFRGYAS*GQTVRR Trigger: GCGTCGCACTGTCTGTCCTCAGCTCGCGTAGCCGCG...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR GCA 90 bp | CCTTACCTTCTGAGGAGCTGGTGCTATGAGGGGAGGAAAGTGAGGCTCGAAGTCCCGCACCGCCTGGCATaGCGGGAAAGGGAGTCGCGA | + |
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Preference number: 4 (lower is better) Translates to: PYLLRSWCYEGRKVRLEVPHRLA*RERESR Trigger: TCGCGACTCCCTTTCCCGGCATGCCAGGCGGTGCGG...GACTTCGAGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR GCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCCGCGCCTCTGGGGCATaGGTACCTGAAGGGTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFRASGA*VPEGLS Trigger: CGACAACCCTTCAGGTACGCATGCCCCAGAGGCGCG...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCGAGCAGGATGGGGTCTaGGGCGACCTCCTGGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFEQDGV*GDLLGL Trigger: CAAACCCAGGAGGTCGCCCCAGACCCCATCCTGCTC...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCCCGCAGCCGCCGCCCTaGCTCTCCGCGCCACGGGTA | + |
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Preference number: 4 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIPQPPP*LSAPRV Trigger: TACCCGTGGCGCGGAGAGTCAGGGCGGCGGCTGCGG...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| CDS-3UTR GCA 90 bp | ACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTTCAGCTGAGGACAGACAGTaGGACGCAAGGCCAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: THVLQHCAVLLPSGVSSSAEDRQ*DARPGL Trigger: GAGTCCTGGCCTTGCGTCGCACTGTCTGTCCTCAGC...TGAAGAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCGTTACCACTGGCGTGTaGACTGAGCAGGATGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFVTTGV*TEQDGV Trigger: GACCCCATCCTGCTCAGTTCACACGCCAGTGGTAAC...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | ACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTTCAGAGGAGCTGGTGCTATaGGGGGAGGAAAGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: THVLQHCAVLLPSGVSSSEELVL*GEESEA Trigger: AGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTC...TGAAGAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCGCGACCTCCTGGGTTTaGACGTGTCCTGTTAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFATSWV*TCPVSD Trigger: GTCGCTAACAGGACACGTCCAAACCCAGGAGGTCGC...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | GCAGGATGGGGTCTGGGGCGACCTCCTGGGTTTGGACGTGTCCTGTTAGCGACATCGAAGTCATACATCTaGAAGGTGGCAAAGTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: AGWGLGRPPGFGRVLLATSKSYI*KVAKLG Trigger: CCCTAACTTTGCCACCTTCCAGATGTATGACTTCGA...TGTCGCTAACAGGACACGTCCAAACCCAGGAGGTCGCCCCAGACCCCATCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | TCCTGGGTTTGGACGTGTCCTGTTAGCGACAGAGTGATTGAGGGTTTCATCTGCCGCTTCCACCCAAAATaGCCGCCGGCGAACCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SWVWTCPVSDRVIEGFICRFHPK*PPANQE Trigger: TTCCTGGTTCGCCGGCGGCCATTTTGGGTGGAAGCG...GCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAACCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTGCTTCCCTCGGGGGTaGGTTCTTCATCAAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFCFPRG*VLHQAD Trigger: ATCTGCTTGATGAAGAACTCACCCCCGAGGGAAGCA...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | AGAGTGATTGAGGGTTTCATCTGCCAGGAGACGCTTCTCAGAGGTAAGGGACTGTCTGGGGCGACCTCCTaGGTTTGGACGTGTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RVIEGFICQETLLRGKGLSGATS*VWTCPV Trigger: AACAGGACACGTCCAAACCCAGGAGGTCGCCCCAGA...CAGTCCCTTACCTCTGAGAAGCGTCTCCTGGCAGATGAAACCCTCAATCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | CCTTACCTTCTGAGGAGCTGGTGCTATGAGGGGAGGAAAGTGAGGCTCGAAGTCGGCCTCAGGTTTGTCTaGCTCCAAAACCCATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PYLLRSWCYEGRKVRLEVGLRFV*LQNPCP Trigger: AGGACATGGGTTTTGGAGCCAGACAAACCTGAGGCC...GACTTCGAGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | CCTTACCTTCTGAGGAGCTGGTGCTATGAGGGGAGGAAAGTGAGGCTCGAAGTCGGCCTTTCACGGGGATaGGTCCGGTGCTTATTATTA | + |
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Preference number: 4 (lower is better) Translates to: PYLLRSWCYEGRKVRLEVGLSRG*VRCLLL Trigger: TAATAATAAGCACCGGACTCATCCCCGTGAAAGGCC...GACTTCGAGCCTCACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | AGAGTGATTGAGGGTTTCATCTGCCAGGAGACGCTTCTCAGAGGTAAGGGACTGGGCAAAGTTAGGGGCTaGCCTCAGGTTTGTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RVIEGFICQETLLRGKGLGKVRG*PQVCLA Trigger: AGCCAGACAAACCTGAGGCCAGCCCCTAACTTTGCC...CAGTCCCTTACCTCTGAGAAGCGTCTCCTGGCAGATGAAACCCTCAATCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTTTCCAGCTTCAGCATaGCAGAGCTGTCTGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFFPASA*QSCLSS Trigger: AGAACTCAGACAGCTCTGTCATGCTGAAGCTGGAAA...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR GCA 90 bp | ACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTTCAATTGAGGGTTTCATCTaGCAGGAGACGCTTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: THVLQHCAVLLPSGVSSSIEGFI*QETLLR Trigger: TCTGAGAAGCGTCTCCTGGCAGATGAAACCCTCAAT...TGAAGAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | ATACATCTGGAAGGTGGCAAAGTTAGGGGCTGGCCTCAGGTTTGTCTGGCTCCATACCTTCTGAGGAGCTaGTGCTATGAGGGGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: IHLEGGKVRGWPQVCLAPYLLRS*CYEGRK Trigger: TTTCCTCCCCTCATAGCACCAGCTCCTCAGAAGGTA...TGGAGCCAGACAAACCTGAGGCCAGCCCCTAACTTTGCCACCTTCCAGATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | GTTTGGACGTGTCCTGTTAGCGACAGAGTGATTGAGGGTTTCATCTGCCAGGAGCTGTTAGCGACAGAGTaGTTGAGGGTTTCATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VWTCPVSDRVIEGFICQELLATE*LRVSSA Trigger: GGCAGATGAAACCCTCAATCACTCTGTCGCTAACAG...CTCCTGGCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR GCA 90 bp | TCCTGGGTTTGGACGTGTCCTGTTAGCGACAGAGTGATTGAGGGTTTCATCTGCGAGCTGTCTGAGTTCTaGTTGCTCACACCCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: SWVWTCPVSDRVIEGFICELSEF*LLTPWI Trigger: TATCCAGGGTGTGAGCAAGCAGAACTCAGACAGCTC...GCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAACCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | TCCTGGGTTTGGACGTGTCCTGTTAGCGACAGAGTGATTGAGGGTTTCATCTGCGTGAAGAAGCTGAGATaGACCAGTCATTCTGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: SWVWTCPVSDRVIEGFICVKKLR*TSHSAS Trigger: ACTAGCAGAATGACTGGTTCATCTCAGCTTCTTCAC...GCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAACCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR GCA 90 bp | CAAAACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCCTGTTCTACATTCGTTaGATTCTTAGCACTGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: QNPCPSTLCCPASLGGEFLFYIR*ILSTGF Trigger: GAAACCAGTGCTAAGAATGCAACGAATGTAGAACAG...GAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR GCA 90 bp | ACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTTCACACTTGGGTTCAGATTaGAAATTCATTGCTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: THVLQHCAVLLPSGVSSSHLGSD*KFIAVR Trigger: TCTCACAGCAATGAATTTGCAATCTGAACCCAAGTG...TGAAGAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCTCCCAAGCCCCTGCGTaGAGAATGTTTTGGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: KSLHSTEAPLGHVIGHIISQAPA*RMFWLL Trigger: TAGCAGCCAAAACATTCTTCACGCAGGGGCTTGGGA...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| CDS-3UTR GCA 90 bp | TTCGTTAAGCTCTTACCATGTGCTTTGCACACATGGGTGTATTTAATCCTTACCCTTCTGAGGAGCTGGTaGTATGAGGGGAGGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: FVKLLPCALHTWVYLILTLLRSW*YEGRKV Trigger: CACTTTCCTCCCCTCATAGCACCAGCTCCTCAGAAG...GGTAAGGATTAAATACACCCATGTGTGCAAAGCACATGGTAAGAGCTTAACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCGCTGTGTCCCATATTTaGAGCTTGATTGTTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIAVSHI*SLIVFP Trigger: CGGGAAAACAATCAAGCTTCAAATATGGGACACAGC...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409784.8 |
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| CDS-3UTR GCA 90 bp | TTCGTTAAGCTCTTACCATGTGCTTTGCACACATGGGTGTATTTAATCCTTACCTGTCTGAGTTCTGCTTaGTCACACCCTGGATACCTT | + |
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Preference number: 4 (lower is better) Translates to: FVKLLPCALHTWVYLILTCLSSA*SHPGYL Trigger: AAGGTATCCAGGGTGTGAGCAAGCAGAACTCAGACA...GGTAAGGATTAAATACACCCATGTGTGCAAAGCACATGGTAAGAGCTTAACGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR TCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCTTGACTGGAGTGCTCTaGATTTTAACATTGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: KSLHSTEAPLGHVIGHIILTGVL*ILTLDF Trigger: GAAGTCCAATGTTAAAATTCAGAGCACTCCAGTCAA...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| CDS-3UTR GCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCCTGTTCTACATTCGTTaGATTCTTAGCACTGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: KSLHSTEAPLGHVIGHIILFYIR*ILSTGF Trigger: GAAACCAGTGCTAAGAATGCAACGAATGTAGAACAG...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| CDS-3UTR GCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCATTATTGAAGGACTCTaGAAACCTAAGAAGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIIIEGL*KPKKKA Trigger: TGCCTTCTTCTTAGGTTTGCAGAGTCCTTCAATAAT...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409892.5 |
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| CDS-3UTR TCA 90 bp | TTCGTTAAGCTCTTACCATGTGCTTTGCACACATGGGTGTATTTAATCCTTACCTTGACTGGAGTGCTCTaGATTTTAACATTGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: FVKLLPCALHTWVYLILTLTGVL*ILTLDF Trigger: GAAGTCCAATGTTAAAATTCAGAGCACTCCAGTCAA...GGTAAGGATTAAATACACCCATGTGTGCAAAGCACATGGTAAGAGCTTAACGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CCA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCTCTAGGTCATGTTATTaGGCATATTATCTAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KSLHSTEAPLGHVIGHIISRSCY*AYYLES Trigger: GCTTTCTAGATAATATGCCCAATAACATGACCTAGA...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| CDS-3UTR CCA 90 bp | TTCGTTAAGCTCTTACCATGTGCTTTGCACACATGGGTGTATTTAATCCTTACCTGTGCTTTGCACACATaGGTGTATTTAATCCTTACC | + |
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Preference number: 4 (lower is better) Translates to: FVKLLPCALHTWVYLILTCALHT*VYLILT Trigger: GGTAAGGATTAAATACACCCATGTGTGCAAAGCACA...GGTAAGGATTAAATACACCCATGTGTGCAAAGCACATGGTAAGAGCTTAACGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| 3UTR CAA 72 bp | GGATGCTGCTCTAAGATAGGTCTAGAATACCTTAGTTaGCATTGTGCACACACAAATGGCTGTGTTGAATAT | + |
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Preference number: 4 (lower is better) Translates to: GCCSKIGLEYLS*HCAHTNGCVEY Trigger: ATATTCAACACAGCCATTTGTGTGTGCACAATGCAAACTAAGGTATTCTAGACCTATCTTAGAGCAGCATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| CDS GCA 90 bp | CGAGGGGCCTTTACACGGCCCAGAGGGCGGCCGCACCGCCTGGCATaGCGGGAAAGGGAGTCGCGAGCGCGGCTACGCGAGCTGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: RGAFTRPRGRPHRLA*RERESRARLRELRT Trigger: TGTCCTCAGCTCGCGTAGCCGCGCTCGCGACTCCCTTTCCCGGCATGCCAGGCGGTGCGGCCGCCCTCTGGGCCGTGTAAAGGCCCCTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS TCA 90 bp | GCCTGGCATGCCGGGAAAGGGAGTCGCGAGCGCGGCTACGCGAGCTaGGGACAGACAGTGCGACGCAAGGCCAGGACTCAGCTTCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: AWHAGKGSRERGYAS*GQTVRRKARTQLPA Trigger: GGCGGGAAGCTGAGTCCTGGCCTTGCGTCGCACTGTCTGTCCTCAGCTCGCGTAGCCGCGCTCGCGACTCCCTTTCCCGGCATGCCAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS GCA 90 bp | GGAAAGGGAGTCGCGAGCGCGGCTACGCGAGCTGAGGACAGACAGTaGGACGCAAGGCCAGGACTCAGCTTCCCGCCAAGCGCCGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: GKGVASAATRAEDRQ*DARPGLSFPPSAAP Trigger: AGGCGCGGCGCTTGGCGGGAAGCTGAGTCCTGGCCTTGCGTCGCACTGTCTGTCCTCAGCTCGCGTAGCCGCGCTCGCGACTCCCTTTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CAA 90 bp | TCCTGGGTTTGGACGTGTCCTGTTAGCGACAGAGTGATTGAGGGTTTCATCTGCGGGCTGGCCTCAGGTTaGTCTGGCTCCAAAACCCAT | + |
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Preference number: 5 (lower is better) Translates to: SWVWTCPVSDRVIEGFICGLASG*SGSKTH Trigger: ATGGGTTTTGGAGCCAGACAAACCTGAGGCCAGCCC...GCAGATGAAACCCTCAATCACTCTGTCGCTAACAGGACACGTCCAAACCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CAA 90 bp | ACCCATGTCCTTCAACACTGTGCTGTCCTGCTTCCCTCGGGGGTGAGTTCTTCACTCTTACCATGTGCTTaGCACACATGGGTGTATTTA | + |
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Preference number: 5 (lower is better) Translates to: THVLQHCAVLLPSGVSSSLLPCA*HTWVYL Trigger: TAAATACACCCATGTGTGCAAAGCACATGGTAAGAG...TGAAGAACTCACCCCCGAGGGAAGCAGGACAGCACAGTGTTGAAGGACATGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CAA 90 bp | ATACATCTGGAAGGTGGCAAAGTTAGGGGCTGGCCTCAGGTTTGTCTGGCTCCATCACTTGGGTTCAGATaGCAAATTCATTGCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: IHLEGGKVRGWPQVCLAPSLGFR*QIHCCE Trigger: CTCACAGCAATGAATTTGCAATCTGAACCCAAGTGA...TGGAGCCAGACAAACCTGAGGCCAGCCCCTAACTTTGCCACCTTCCAGATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS-3UTR CAA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCCCACAACAAAATGTGTaGCCAGCAGCCATATCCCAA | + |
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Preference number: 5 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIPQQNV*PAAISQ Trigger: TTGGGATATGGCTGCTGGCAACACATTTTGTTGTGG...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409784.8 ENST00000409892.5 |
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| CDS-3UTR CAA 90 bp | AAATCCCTACACAGCACAGAAGCCCCTCTAGGTCATGTTATTGGGCATATTATCCACTGTTTAACATTATaGAAGGACTCTGCAAACCTA | + |
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Preference number: 5 (lower is better) Translates to: KSLHSTEAPLGHVIGHIIHCLTL*KDSANL Trigger: TAGGTTTGCAGAGTCCTTCAATAATGTTAAACAGTG...GATAATATGCCCAATAACATGACCTAGAGGGGCTTCTGTGCTGTGTAGGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409892.5 |
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| CDS CCA 72 bp | GGGCCTTTACACGGCCCAGAGGGCGGCCGCACCGCCTaGCATGCCGGGAAAGGGAGTCGCGAGCGCGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: GPLHGPEGGRTA*HAGKGSRERGY Trigger: GTAGCCGCGCTCGCGACTCCCTTTCCCGGCATGCCAGGCGGTGCGGCCGCCCTCTGGGCCGTGTAAAGGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS GCA 72 bp | TTTACACGGCCCAGAGGGCGGCCGCACCGCCTGGCATaGCGGGAAAGGGAGTCGCGAGCGCGGCTACGCGAG | + |
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Preference number: 6 (lower is better) Translates to: FTRPRGRPHRLA*RERESRARLRE Trigger: CTCGCGTAGCCGCGCTCGCGACTCCCTTTCCCGGCATGCCAGGCGGTGCGGCCGCCCTCTGGGCCGTGTAAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS GCA 72 bp | ACTCAGCTTCCCGCCAAGCGCCGCGCCTCTGGGGCATaGGTACCTGAAGGGTTGTCGCCCGCCCCATTCCCC | + |
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Preference number: 6 (lower is better) Translates to: TQLPAKRRASGA*VPEGLSPAPFP Trigger: GGGGAATGGGGCGGGCGACAACCCTTCAGGTACGCATGCCCCAGAGGCGCGGCGCTTGGCGGGAAGCTGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS TCA 72 bp | GCCGGGAAAGGGAGTCGCGAGCGCGGCTACGCGAGCTaGGGACAGACAGTGCGACGCAAGGCCAGGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: AGKGSRERGYAS*GQTVRRKARTQ Trigger: CTGAGTCCTGGCCTTGCGTCGCACTGTCTGTCCTCAGCTCGCGTAGCCGCGCTCGCGACTCCCTTTCCCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS GCA 72 bp | GTCGCGAGCGCGGCTACGCGAGCTGAGGACAGACAGTaGGACGCAAGGCCAGGACTCAGCTTCCCGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: VASAATRAEDRQ*DARPGLSFPPS Trigger: GCTTGGCGGGAAGCTGAGTCCTGGCCTTGCGTCGCACTGTCTGTCCTCAGCTCGCGTAGCCGCGCTCGCGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649427.1 |
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| CDS TCA 72 bp | GGGACTGTTTTCCAGCTTCAGCATGACAGAGCTGTCTaGGTTCTGCTTGCTCACACCCTGGATACTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GTVFQLQHDRAV*VLLAHTLDTAN Trigger: GTTTGCAGTATCCAGGGTGTGAGCAAGCAGAACTCAGACAGCTCTGTCATGCTGAAGCTGGAAAACAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494188.1 |
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