RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB17 (Homo sapiens)

Ensembl gene IDs: ENSG00000124839

Ensembl transcript IDs: ENST00000264601.8, ENST00000392001.6, ENST00000409576.1, ENST00000409822.1, ENST00000411462.5, ENST00000414278.1, ENST00000416106.1, ENST00000430445.1, ENST00000466244.1, ENST00000477149.5, ENST00000487008.1

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTaGCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGC +
Preference number: 1 (lower is better)
Translates to: PAGRPWKGTGATAPS*PSQGQLHQDVEILG
Trigger: GCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR GCA 90 bp CACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTaGCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGA +
Preference number: 1 (lower is better)
Translates to: HHIASRETMEGNWRH*PQLPFPGATSPRCG
Trigger: TCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR CCA 90 bp ACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTaGCGCCACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCA +
Preference number: 1 (lower is better)
Translates to: TQLHHIASRETMEGN*RHCPQLPFPGATSP
Trigger: TGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR CCA 90 bp ATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATaGAAGGGAACTGGCGCCACTGCCCCCAGCTGCCCTTCCCAGGGG +
Preference number: 1 (lower is better)
Translates to: IGQKLSFTTLPAGRP*KGTGATAPSCPSQG
Trigger: CCCCTGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR CCA 90 bp CCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTaGGCCCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCAC +
Preference number: 1 (lower is better)
Translates to: PAALPRGNFTKMWKS*AHPTVSHRSISSWH
Trigger: GTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR TCA 90 bp ATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCCATGTaGCGCCAGATCTTCCTCTGGCAGTTCCCACTGGCTGTGGGAAGT +
Preference number: 1 (lower is better)
Translates to: MVSVGIGHSTFLGAM*RQIFLWQFPLAVGS
Trigger: ACTTCCCACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR GCA 90 bp TCAGAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTaGCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCA +
Preference number: 1 (lower is better)
Translates to: SESSCSLDRNSASPH*QPGDHGRELAPLPP
Trigger: TGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR CCA 90 bp TCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACTaGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: SWEPCDARSSSGSSH*LWEVVFIKGANFQE
Trigger: TTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR CCA 90 bp ACCTGGTGGTTCAGTTTGGCCGAAGTTTCCATGAACAGCAACTTCTaGCTGTCGGCAAACTCCTTCCCTTCCTGGAAGGTCACCTCCCGC +
Preference number: 1 (lower is better)
Translates to: TWWFSLAEVSMNSNF*LSANSFPSWKVTSR
Trigger: GCGGGAGGTGACCTTCCAGGAAGGGAAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR CCA 90 bp GAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTA +
Preference number: 1 (lower is better)
Translates to: EPCDARSSSGSSHWL*EVVFIKGANFQEHL
Trigger: TAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR CCA 90 bp TGCAGTAGCTCTTGGGCCACTGTATTGAACACCTCCGACACCTGGTaGTTCAGTTTGGCCGAAGTTTCCATGAACAGCAACTTCTGGCTG +
Preference number: 1 (lower is better)
Translates to: CSSSWATVLNTSDTW*FSLAEVSMNSNFWL
Trigger: CAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGAGCTACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR CCA 90 bp CTCTGCAGTAGCTCTTGGGCCACTGTATTGAACACCTCCGACACCTaGTGGTTCAGTTTGGCCGAAGTTTCCATGAACAGCAACTTCTGG +
Preference number: 1 (lower is better)
Translates to: LCSSSWATVLNTSDT*WFSLAEVSMNSNFW
Trigger: CCAGAAGTTGCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGAGCTACTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR GCA 90 bp ACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTaGTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGA +
Preference number: 1 (lower is better)
Translates to: TQYNLYLRRNVSESS*SLDRNSASPHCQPG
Trigger: TCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR CCA 90 bp ACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTGCTCATTaGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATG +
Preference number: 1 (lower is better)
Translates to: TTYISGEMSQNLPAH*TETQLHHIASRETM
Trigger: CATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp CATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTGCCCACAGCCCCCAGGAGTaGCTGCACCTAGTGGGCGCA +
Preference number: 2 (lower is better)
Translates to: HCQPGDHGRELAPLPPAAHSPQE*LHLVGA
Trigger: TGCGCCCACTAGGTGCAGCCACTCCTGGGGGCTGTG...GGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp CCACAGCCCCCAGGAGTGGCTGCACCTAGTGGGCGCAGCATTTGGCCTGCCTCGTTCCTGGGAGCCATGTaGCGCCAGATCTTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: PQPPGVAAPSGRSIWPASFLGAM*RQIFLW
Trigger: CCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAA...CGAGGCAGGCCAAATGCTGCGCCCACTAGGTGCAGCCACTCCTGGGGGCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp GCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCACACCTCCCGCTCCTGGCTaGGGTCCGTCTTGTTGCCCA +
Preference number: 2 (lower is better)
Translates to: ALPRGNFTKMWKSWAHPTPPAPG*GPSCCP
Trigger: TGGGCAACAAGACGGACCTCAGCCAGGAGCGGGAGG...TGTGGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp CCCCGTAGAGCCTGGCCCTCCTCGTCGCTTCTCTGCAGTAGCTCTTGGGCCACTGTCACCTCCCGCTCCTaGCTGAGGTCCGTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: PRRAWPSSSLLCSSSWATVTSRS*LRSVLL
Trigger: CAACAAGACGGACCTCAGCCAGGAGCGGGAGGTGAC...AGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGAGGGCCAGGCTCTACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR GCA 90 bp GCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCAGGCTCCAGGCCAGTaGCCCCATCAAGATCAGACG +
Preference number: 2 (lower is better)
Translates to: APSCPSQGQLHQDVEILGQAPGQ*PHQDQT
Trigger: CGTCTGATCTTGATGGGGGCACTGGCCTGGAGCCTG...GCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp GAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCGGGCCACCGTCCAGGTaGAACAGGCACAGGCATCGG +
Preference number: 2 (lower is better)
Translates to: ETQLHHIASRETMEGNWRGPPSR*NRHRHR
Trigger: CCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCC...GCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp CAGGAGTGGCTGCACCTAGTGGGCGCAGCATTTGGCCTGCCTCGCGGGCCCCTTTGGCCGAAGTTTCCATaGACAGCAACTTCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: QEWLHLVGAAFGLPRGPLWPKFP*TATSGC
Trigger: ACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCA...AAGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCACTAGGTGCAGCCACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp TTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCCTTGGGCCACTGTATTaGACACCTCCGACACCTGGT +
Preference number: 2 (lower is better)
Translates to: FTTLPAGRPWKGTGATAPLGPLY*TPPTPG
Trigger: ACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAG...GGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR GCA 90 bp GATAGGGCACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGCGCAGCATTTGGCCTaGCTCGCGGGCCCCTTGTTC +
Preference number: 2 (lower is better)
Translates to: DRAQHFPGSHVTPDLPLAAQHLA*LAGPLF
Trigger: GAACAAGGGGCCCGCGAGGCAGGCCAAATGCTGCGC...TGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp CTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCAGTGGGCGCAGCATTTaGCCTGCCTCGCGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: LPAHWTETQLHHIASRETSGRSI*PASRAP
Trigger: AGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCACT...GGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp CTTCTCTGCAGTAGCTCTTGGGCCACTGTATTGAACACCTCCGACACCTGGTGGCCTCCCGCTCCTGGCTaGGGTCCGTCTTGTTGCCCA +
Preference number: 2 (lower is better)
Translates to: LLCSSSWATVLNTSDTWWPPAPG*GPSCCP
Trigger: TGGGCAACAAGACGGACCTCAGCCAGGAGCGGGAGG...CCACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGAGCTACTGCAGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp ACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACCAGCGTTGGCACCCCTaGAGTAGAGGTGGCAGACGC +
Preference number: 2 (lower is better)
Translates to: TALSWEPCDARSSSGSSHQRWHP*SRGGRR
Trigger: GCGTCTGCCACCTCTACTTCAGGGGTGCCAACGCTG...GTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414278.1
3UTR-3UTR GCA 90 bp GAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCAGGACTTCTCCTGGGTaGAGCTCCTCCTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: ETQLHHIASRETMEGNWRRTSPG*SSSSRS
Trigger: GGACCTGGAGGAGGAGCTGCACCCAGGAGAAGTCCT...GCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp CGCCACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCGCCAGATCTTCCTCTaGCAGTTCCCACTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: RHCPQLPFPGATSPRCGNRQIFL*QFPLAV
Trigger: CACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCG...ATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp GGCTCCAGGCCAGTGCCCCCATCAAGATCAGACGTAAGGCATCTTCCCACCGTCCGCCAGATCTTCCTCTaGCAGTTCCCACTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: GSRPVPPSRSDVRHLPTVRQIFL*QFPLAV
Trigger: CACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCG...GACGGTGGGAAGATGCCTTACGTCTGATCTTGATGGGGGCACTGGCCTGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp TCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCCTGCTCCCGTCACCTCCCGCTCCTaGCTGAGGTCCGTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: SVIAPFLPGTTTSIWPAPVTSRS*LRSVLL
Trigger: CAACAAGACGGACCTCAGCCAGGAGCGGGAGGTGAC...GGGAGCAGGCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR CAA 90 bp GGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATaGACAGTGAATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GANFQEHLGLGSNPA*TVNQNPPRAGHGPG
Trigger: GCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR-3UTR GCA 90 bp CAGAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGGGAACTGGCGCCACTaGCCCCAGCTGCCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: QNLPAHWTETQLHHIASRGNWRH*PQLPFP
Trigger: TGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCC...CCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR GCA 90 bp CGCCACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATTCCTCGTCGCTTCTCTaGAGTAGCTCTTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: RHCPQLPFPGATSPRCGNSSSLL*SSSWAT
Trigger: AGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGA...ATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp CGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATTTCCTGGGAGCCATGTaGCGCCAGATCTTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RPGGTGTGIGESDGISGDFLGAM*RQIFLW
Trigger: CCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAA...ATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR-3UTR CCA 90 bp AGTGGGGATAGGGCACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCGCCAGATCTTCCTCTaGCAGTTCCCACTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SGDRAQHFPGSHVTPDLPRQIFL*QFPLAV
Trigger: CACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCG...AGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR-3UTR CCA 90 bp CCCAGGCTCCAGGCCAGTGCCCCCATCAAGATCAGACGTAAGGCATCTTCCCACAACACCTCCGACACCTaGTGGTTCAGTTTGGCCGAA +
Preference number: 2 (lower is better)
Translates to: PRLQASAPIKIRRKASSHNTSDT*WFSLAE
Trigger: TTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTT...GTGGGAAGATGCCTTACGTCTGATCTTGATGGGGGCACTGGCCTGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp CATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGACACAGCCCCCAGGAGTaGCTGCACCTAGTGGGCGCA +
Preference number: 2 (lower is better)
Translates to: HLGLGSNPALTVNQNPPRHSPQE*LHLVGA
Trigger: TGCGCCCACTAGGTGCAGCCACTCCTGGGGGCTGTG...TCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp AAATCCTGGGCCCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCTTGGGCCACTGTATTaGACACCTCCGACACCTGGT +
Preference number: 2 (lower is better)
Translates to: KSWAHPTVSHRSISSWHHLGPLY*TPPTPG
Trigger: ACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAG...GTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGGGCCCAGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp TCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCCTGCTCCCTCTGGCAGTTCCCACTaGCTGTGGGAAGTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: SVIAPFLPGTTTSIWPAPSGSSH*LWEVVF
Trigger: GAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGA...GGGAGCAGGCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp ACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGAACTTCACCAAGATGTaGAAATCCTGGGCCCACCCC +
Preference number: 2 (lower is better)
Translates to: TAPSCPSQGQLHQDVEILNFTKM*KSWAHP
Trigger: GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTT...CAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR GCA 90 bp TCAGATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCCATGTGACGTTCCCACCGTCGCTGTaGTGCGGGGACTTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: SDGISGDRAQHFPGSHVTFPPSL*CGDFSN
Trigger: ATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGAA...CGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp TGGCCCTCCTCGTCGCTTCTCTGCAGTAGCTCTTGGGCCACTGTATTGAACACCTCTGGCAGTTCCCACTaGCTGTGGGAAGTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: WPSSSLLCSSSWATVLNTSGSSH*LWEVVF
Trigger: GAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGA...GGTGTTCAATACAGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp TGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAACTCCTTCCCTTCCTaGAAGGTCACCTCCCGCTCC +
Preference number: 2 (lower is better)
Translates to: CSLDRNSASPHCQPGDHGNSFPS*KVTSRS
Trigger: GGAGCGGGAGGTGACCTTCCAGGAAGGGAAGGAGTT...TCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR GCA 90 bp AACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGCCACCGTCGCTGTGCTaGGGGGACTTTTCCAATCCT +
Preference number: 2 (lower is better)
Translates to: NFQEHLGLGSNPALTVNQPPSLC*GDFSNP
Trigger: AGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGG...CTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp AGAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGGGCACAGCACTTTCCTaGGAGCCATGTGACGCCAGA +
Preference number: 2 (lower is better)
Translates to: RIFLLIGQKLSFTTLPAGGTALS*EPCDAR
Trigger: TCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCC...CCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp ACCTCCGACACCTGGTGGTTCAGTTTGGCCGAAGTTTCCATGAACAGCAACTTCAGGTGGCAGACGCTGTaGTACTTCTCCTGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: TSDTWWFSLAEVSMNSNFRWQTL*YFSWPA
Trigger: AGCTGGCCAGGAGAAGTACCACAGCGTCTGCCACCT...GAAGTTGCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414278.1
3UTR-3UTR GCA 90 bp CAGAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGTCCTCGTCGCTTCTCTaGAGTAGCTCTTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: QNLPAHWTETQLHHIASRSSSLL*SSSWAT
Trigger: AGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGA...CCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp TCCCACCGTCGCTGTGCTGCGGGGACTTTTCCAATCCTTCCTTCCTCTCTGTCCAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAG +
Preference number: 2 (lower is better)
Translates to: SHRRCAAGTFPILPSSLSSSHWL*EVVFIK
Trigger: CTTTATGAAAACCACTTCCCACAGCCAGTGGGAACT...GGACAGAGAGGAAGGAAGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp GTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACACCTCCGACACCTGGTaGTTCAGTTTGGCCGAAGTT +
Preference number: 2 (lower is better)
Translates to: VVFIKGANFQEHLGLGSNTSDTW*FSLAEV
Trigger: AACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGT...GTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR CAA 90 bp TCTTGGGCCACTGTATTGAACACCTCCGACACCTGGTGGTTCAGTTaGGCCGAAGTTTCCATGAACAGCAACTTCTGGCTGTCGGCAAAC +
Preference number: 2 (lower is better)
Translates to: SWATVLNTSDTWWFS*AEVSMNSNFWLSAN
Trigger: GTTTGCCGACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp GAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAG +
Preference number: 2 (lower is better)
Translates to: EQAQASGNQMVSVGIGHSSSHWL*EVVFIK
Trigger: CTTTATGAAAACCACTTCCCACAGCCAGTGGGAACT...GCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR-3UTR CCA 90 bp AACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAACACCTCCGACACCTaGTGGTTCAGTTTGGCCGAA +
Preference number: 2 (lower is better)
Translates to: NFQEHLGLGSNPALTVNQNTSDT*WFSLAE
Trigger: TTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTT...CTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CCA 90 bp ACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAG +
Preference number: 2 (lower is better)
Translates to: TETQLHHIASRETMEGNWSSHWL*EVVFIK
Trigger: CTTTATGAAAACCACTTCCCACAGCCAGTGGGAACT...CCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR TCA 90 bp AGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATTTCCTGGGAGCCATGTaGCGCCAGATCTTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RKNCIRSTTYISGEMSQNFLGAM*RQIFLW
Trigger: CCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAA...ATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
3UTR-3UTR TCA 90 bp AGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATTGGCCGAAGTTTCCATaGACAGCAACTTCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: RKNCIRSTTYISGEMSQNWPKFP*TATSGC
Trigger: ACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCA...ATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392001.6
3UTR GCA 72 bp GCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTaGCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCA +
Preference number: 3 (lower is better)
Translates to: ASRETMEGNWRH*PQLPFPGATSP
Trigger: TGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR CCA 72 bp CCCCCAGGAGTGGCTGCACCTAGTGGGCGCAGCATTTaGCCTGCCTCGCGGGCCCCTTGTTCAGAGCCACAG +
Preference number: 3 (lower is better)
Translates to: PPGVAAPSGRSI*PASRAPCSEPQ
Trigger: CTGTGGCTCTGAACAAGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCACTAGGTGCAGCCACTCCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CAA 90 bp CATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTGCCTCTTGGGCCACTGTATaGAACACCTCCGACACCTGG +
Preference number: 3 (lower is better)
Translates to: HCQPGDHGRELAPLPPAASWATV*NTSDTW
Trigger: CCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGA...GGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR CCA 72 bp AAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATaGAAGGGAACTGGCGCCACTGCCCCCAGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: KLSFTTLPAGRP*KGTGATAPSCP
Trigger: AGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR GCA 72 bp AGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTaGCCTTCCCAGGGGCAACTTCACCAAGATGTGGAA +
Preference number: 3 (lower is better)
Translates to: RPWKGTGATAPS*PSQGQLHQDVE
Trigger: TTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR CCA 72 bp CCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTaGAAATCCTGGGCCCACCCCACAGTCAGTCATCGC +
Preference number: 3 (lower is better)
Translates to: PAALPRGNFTKM*KSWAHPTVSHR
Trigger: GCGATGACTGACTGTGGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CAA 90 bp CCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCCCTCAGCTTCACCACATaGCCAGCCGGGAGACCATGG +
Preference number: 3 (lower is better)
Translates to: PTVSHRSISSWHHHLHLALSFTT*PAGRPW
Trigger: CCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAG...GGCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR TCA 72 bp GTGGGGATAGGGCACAGCACTTTCCTGGGAGCCATGTaGCGCCAGATCTTCCTCTGGCAGTTCCCACTGGCT +
Preference number: 3 (lower is better)
Translates to: VGIGHSTFLGAM*RQIFLWQFPLA
Trigger: AGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR GCA 72 bp TCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTaGCAGCCGGGAGACCATGGAAGGGAACTGGCGCCA +
Preference number: 3 (lower is better)
Translates to: SCSLDRNSASPH*QPGDHGRELAP
Trigger: TGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CAA 90 bp TCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCCTGCTCCCGGGAGCAACCCAGCATaGACAGTGAATCAGAATCCA +
Preference number: 3 (lower is better)
Translates to: SVIAPFLPGTTTSIWPAPGSNPA*TVNQNP
Trigger: TGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCC...GGGAGCAGGCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
3UTR CCA 72 bp GACGCCAGATCTTCCTCTGGCAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAG +
Preference number: 3 (lower is better)
Translates to: DARSSSGSSHWL*EVVFIKGANFQ
Trigger: CTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR CCA 72 bp CCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACTaGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAAC +
Preference number: 3 (lower is better)
Translates to: PCDARSSSGSSH*LWEVVFIKGAN
Trigger: GTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
3UTR-3UTR CAA 90 bp GGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTGGCACCTGGTGGTTCAGTTaGGCCGAAGTTTCCATGAAC +
Preference number: 3 (lower is better)
Translates to: GLGSNPALTVNQNPPRAGTWWFS*AEVSMN
Trigger: GTTCATGGAAACTTCGGCCAAACTGAACCACCAGGT...GCCAGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR TCA 72 bp CCGACACCTGGTGGTTCAGTTTGGCCGAAGTTTCCATaGACAGCAACTTCTGGCTGTCGGCAAACTCCTTCC +
Preference number: 3 (lower is better)
Translates to: PTPGGSVWPKFP*TATSGCRQTPS
Trigger: GGAAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGTGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR CCA 72 bp AGCTCTTGGGCCACTGTATTGAACACCTCCGACACCTaGTGGTTCAGTTTGGCCGAAGTTTCCATGAACAGC +
Preference number: 3 (lower is better)
Translates to: SSWATVLNTSDT*WFSLAEVSMNS
Trigger: GCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR-3UTR CAA 90 bp ATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACCTGGTGGTTCAGTTaGGCCGAAGTTTCCATGAAC +
Preference number: 3 (lower is better)
Translates to: IGQKLSFTTLPAGRPWKGTWWFS*AEVSMN
Trigger: GTTCATGGAAACTTCGGCCAAACTGAACCACCAGGT...TCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR CCA 72 bp TCTTGGGCCACTGTATTGAACACCTCCGACACCTGGTaGTTCAGTTTGGCCGAAGTTTCCATGAACAGCAAC +
Preference number: 3 (lower is better)
Translates to: SWATVLNTSDTW*FSLAEVSMNSN
Trigger: GTTGCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
3UTR GCA 72 bp AACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTaGTCATTGGACAGAAACTCAGCTTCACCACATTGC +
Preference number: 3 (lower is better)
Translates to: NLYLRRNVSESS*SLDRNSASPHC
Trigger: GCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp GGGCGCAGCATTTGGCCTGCCTCGCGGGCCCCTTGTTCAGAGCCACAGCTGCATAGTGGGCGCAGCATTTaGCCTGCCTCGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GRSIWPASRAPCSEPQLHSGRSI*PASRAP
Trigger: AGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCACT...ATGCAGCTGTGGCTCTGAACAAGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTGCTCGGACCAGAGCAATaGCCACTGGACCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HIASRETMEGNWRHCPQLLGPEQ*PLDPSA
Trigger: GGCGCTGGGGTCCAGTGGGCATTGCTCTGGTCCGAG...CAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTGCGCAGCATTTGGCCTaGCTCGCGGGCCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PHCQPGDHGRELAPLPPAAQHLA*LAGPLF
Trigger: GAACAAGGGGCCCGCGAGGCAGGCCAAATGCTGCGC...AGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp CCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTGCCCTTCCTTCCTGGGAGCCATGTaGCGCCAGATCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PAGRPWKGTGATAPSCPSFLGAM*RQIFLW
Trigger: CCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAA...GGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCCAGGCCCGGTCACTTaGAGGGAGCTGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HHIASRETMEGNWRHCPQPGPVT*RELKSL
Trigger: CAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGG...CTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp TTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCTGTGTGCCTGTGCCATaGCCTGTTCCCCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FTTLPAGRPWKGTGATAPCVPVP*PVPQAR
Trigger: CCGGGCCTGGGGAACAGGGCATGGCACAGGCACACA...GGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CCCCGTAGAGCCTGGCCCTCCTCGTCGCTTCTCTGCAGTAGCTCTTGGGCCACTCACAGCCCCCAGGAGTaGCTGCACCTAGTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PRRAWPSSSLLCSSSWATHSPQE*LHLVGA
Trigger: TGCGCCCACTAGGTGCAGCCACTCCTGGGGGCTGTG...AGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGAGGGCCAGGCTCTACGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTGCCCTTCCTCCTCGTCGCTTCTCTaGAGTAGCTCTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PAGRPWKGTGATAPSCPSSSSLL*SSSWAT
Trigger: AGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGA...GGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTCAGGCTCCAGGCCAGTaGCCCCATCAAGATCAGACG +
Preference number: 4 (lower is better)
Translates to: PHCQPGDHGRELAPLPPAQAPGQ*PHQDQT
Trigger: CGTCTGATCTTGATGGGGGCACTGGCCTGGAGCCTG...AGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp TGGCTGCACCTAGTGGGCGCAGCATTTGGCCTGCCTCGCGGGCCCCTTGTTCAGCAGAGCAATGCCCACTaGACCCCAGCGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WLHLVGAAFGLPRGPLVQQSNAH*TPAPRS
Trigger: TGACCTTGGCGCTGGGGTCCAGTGGGCATTGCTCTG...CTGAACAAGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCACTAGGTGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp TCCTGGGCCCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACTTGAACACACGGGGCTaGCTGGGGGCAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SWAHPTVSHRSISSWHHHLNTRG*LGAALG
Trigger: GCCCAGGGCTGCCCCCAGCCAGCCCCGTGTGTTCAA...GTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGGGCCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp TGGGCCCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCTTGAACACACGGGGCTaGCTGGGGGCAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WAHPTVSHRSISSWHHHLLNTRG*LGAALG
Trigger: GCCCAGGGCTGCCCCCAGCCAGCCCCGTGTGTTCAA...GAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CCACAGCCCCCAGGAGTGGCTGCACCTAGTGGGCGCAGCATTTGGCCTGCCTCGCGCCAGATCTTCCTCTaGCAGTTCCCACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQPPGVAAPSGRSIWPASRQIFL*QFPLAV
Trigger: CACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCG...CGAGGCAGGCCAAATGCTGCGCCCACTAGGTGCAGCCACTCCTGGGGGCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp GAGGGGGCCACCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTACAGCGTTGGCACCCCTaGAGTAGAGGTGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: EGATVQVEQAQASGNQMVQRWHP*SRGGRR
Trigger: GCGTCTGCCACCTCTACTTCAGGGGTGCCAACGCTG...TACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp CCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTGCCCTTCCAGGAATCCTTCCTGGTaGTGTCGTACACCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: PAGRPWKGTGATAPSCPSRNPSW*CRTPEA
Trigger: CGCTTCTGGTGTACGACATCACCAGGAAGGATTCCT...GGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000414278.1
CDS-3UTR TCA 90 bp CTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCACCTCCCGCTCCTGGCTaGGGTCCGTCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LPFPGATSPRCGNPGPTPPPAPG*GPSCCP
Trigger: TGGGCAACAAGACGGACCTCAGCCAGGAGCGGGAGG...TGGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp TGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCACCTCGGACCAGAGCAATaGCCACTGGACCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: CPSQGQLHQDVEILGPPHLGPEQ*PLDPSA
Trigger: GGCGCTGGGGTCCAGTGGGCATTGCTCTGGTCCGAG...GTGGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp GCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCCCAGGCCCGGTCACTTaGAGGGAGCTGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AALPRGNFTKMWKSWAHPPGPVT*RELKSL
Trigger: CAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGG...GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp AGCCCCCAGGAGTGGCTGCACCTAGTGGGCGCAGCATTTGGCCTGCCTCGCGGGAAGATGTGGAAATCCTaGGCCCACCCCACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SPQEWLHLVGAAFGLPRGKMWKS*AHPTVS
Trigger: ACTGACTGTGGGGTGGGCCCAGGATTTCCACATCTT...CCCGCGAGGCAGGCCAAATGCTGCGCCCACTAGGTGCAGCCACTCCTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp GCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCCCAGCCGGGAGACCATaGAAGGGAACTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: AALPRGNFTKMWKSWAHPPAGRP*KGTGAT
Trigger: AGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGG...GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp CTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCACCAGGAGAACCAGCTTaGACACACGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPFPGATSPRCGNPGPTPPGEPA*THGAGW
Trigger: CCAGCCAGCCCCGTGTGTTCAAGCTGGTTCTCCTGG...TGGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp CCCAGGCTCCAGGCCAGTGCCCCCATCAAGATCAGACGTAAGGCATCTTCCCACCCAGGAGAACCAGCTTaGACACACGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLQASAPIKIRRKASSHPGEPA*THGAGW
Trigger: CCAGCCAGCCCCGTGTGTTCAAGCTGGTTCTCCTGG...GTGGGAAGATGCCTTACGTCTGATCTTGATGGGGGCACTGGCCTGGAGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp AATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGCAGGGGGTGTCTTCCCCACCCAGGCCCGGTCACTTaGAGGGAGCTGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NQNPPRAGHGPGRGCLPHPGPVT*RELKSL
Trigger: CAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGG...GTGGGGAAGACACCCCCTGCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp GAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCGGGAACTGGCGCCACTaGCCCCAGCTGCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: EQAQASGNQMVSVGIGHSGNWRH*PQLPFP
Trigger: TGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCC...GCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGCTTCAGCTTCACCACATTaGCAGCCGGGAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: PHCQPGDHGRELAPLPPASASPH*QPGDHG
Trigger: TCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGA...AGCTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGAGTGGGCGCAGCATTTaGCCTGCCTCGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PGGTGTGIGESDGISGDRSGRSI*PASRAP
Trigger: AGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCACT...CCTATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp ACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGCACAGCCCCCAGGAGTaGCTGCACCTAGTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TAPSCPSQGQLHQDVEILHSPQE*LHLVGA
Trigger: TGCGCCCACTAGGTGCAGCCACTCCTGGGGGCTGTG...CAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp GGCTCCAGGCCAGTGCCCCCATCAAGATCAGACGTAAGGCATCTTCCCACCGTCCCAGCCGGGAGACCATaGAAGGGAACTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: GSRPVPPSRSDVRHLPTVPAGRP*KGTGAT
Trigger: AGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGG...GACGGTGGGAAGATGCCTTACGTCTGATCTTGATGGGGGCACTGGCCTGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp GTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGACCTCAAAGCAGGTaGCCCGGGAGCACCTGCGCG +
Preference number: 4 (lower is better)
Translates to: VQVEQAQASGNQMVSVGIGPQSR*PGSTCA
Trigger: CGCGCAGGTGCTCCCGGGTCACCTGCTTTGAGGTCC...TATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR GCA 90 bp GATAGGGCACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCACTCGGACCAGAGCAATaGCCACTGGACCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: DRAQHFPGSHVTPDLPLALGPEQ*PLDPSA
Trigger: GGCGCTGGGGTCCAGTGGGCATTGCTCTGGTCCGAG...TGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp AAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACATGTGTGCCTGTGCCATaGCCTGTTCCCCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KGANFQEHLGLGSNPALTCVPVP*PVPQAR
Trigger: CCGGGCCTGGGGAACAGGGCATGGCACAGGCACACA...TGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp TGGCCCTCCTCGTCGCTTCTCTGCAGTAGCTCTTGGGCCACTGTATTGAACACCGGGCCACCGTCCAGGTaGAACAGGCACAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: WPSSSLLCSSSWATVLNTGPPSR*NRHRHR
Trigger: CCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCC...GGTGTTCAATACAGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp CGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATCCAGGAGAACCAGCTTaGACACACGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPGGTGTGIGESDGISGDPGEPA*THGAGW
Trigger: CCAGCCAGCCCCGTGTGTTCAAGCTGGTTCTCCTGG...ATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp CCCAGGCTCCAGGCCAGTGCCCCCATCAAGATCAGACGTAAGGCATCTTCCCACCATCCACCACCTTTGTaGAGAACGCACAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: PRLQASAPIKIRRKASSHHPPPL*RTHSPP
Trigger: CGGTGGGCTGTGCGTTCTTCACAAAGGTGGTGGATG...GTGGGAAGATGCCTTACGTCTGATCTTGATGGGGGCACTGGCCTGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264601.8
CDS-3UTR TCA 90 bp ACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCCTCCCGCTCCTGGCTaGGGTCCGTCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TETQLHHIASRETMEGNWPPAPG*GPSCCP
Trigger: TGGGCAACAAGACGGACCTCAGCCAGGAGCGGGAGG...CCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp GCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCTTGGGCCACTGTATTaGACACCTCCGACACCTGGT +
Preference number: 4 (lower is better)
Translates to: APSCPSQGQLHQDVEILGLGPLY*TPPTPG
Trigger: ACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAG...GCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp GTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATACTCGGACCAGAGCAATaGCCACTGGACCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VQVEQAQASGNQMVSVGILGPEQ*PLDPSA
Trigger: GGCGCTGGGGTCCAGTGGGCATTGCTCTGGTCCGAG...TATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp TTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCACCAGTCCACAGCGTTaGTACCTGTCTCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FTTLPAGRPWKGTGATAPTSPQR*YLSPLS
Trigger: AGAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGT...GGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp TCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCCTGCTCCCAGGACTTCTCCTGGGTaGAGCTCCTCCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVIAPFLPGTTTSIWPAPRTSPG*SSSSRS
Trigger: GGACCTGGAGGAGGAGCTGCACCCAGGAGAAGTCCT...GGGAGCAGGCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp GGTGATGTCGTACACCAGAAGCGCAGCGTTGGCACCCCTGAAGTAGAGGTGGCAAGGACTTCTCCTGGGTaGAGCTCCTCCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GDVVHQKRSVGTPEVEVARTSPG*SSSSRS
Trigger: GGACCTGGAGGAGGAGCTGCACCCAGGAGAAGTCCT...TGCCACCTCTACTTCAGGGGTGCCAACGCTGCGCTTCTGGTGTACGACATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414278.1
CDS-3UTR GCA 90 bp CCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACTGGCTGTGGGTCCTCGTCGCTTCTCTaGAGTAGCTCTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PGSHVTPDLPLAVPTGCGSSSLL*SSSWAT
Trigger: AGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGA...CCCACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp ATCTTCCCACCGTCGCTGTGCTGCGGGGACTTTTCCAATCCTTCCTTCCTCTCTGCGCAGCATTTGGCCTaGCTCGCGGGCCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: IFPPSLCCGDFSNPSFLSAQHLA*LAGPLF
Trigger: GAACAAGGGGCCCGCGAGGCAGGCCAAATGCTGCGC...AGAGAGGAAGGAAGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp GGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCCATGGCGCAGCATTTGGCCTaGCTCGCGGGCCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GNQMVSVGIGHSTFLGAMAQHLA*LAGPLF
Trigger: GAACAAGGGGCCCGCGAGGCAGGCCAAATGCTGCGC...CATGGCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCATCTGATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp GGCCACTGTATTGAACACCTCCGACACCTGGTGGTTCAGTTTGGCCGAAGTTTCGGGAACTGGCGCCACTaGCCCCAGCTGCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GHCIEHLRHLVVQFGRSFGNWRH*PQLPFP
Trigger: TGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCC...GAAACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTTCAATACAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CCCAGGCTCCAGGCCAGTGCCCCCATCAAGATCAGACGTAAGGCATCTTCCCACGGAGCACCTGCGCGCTaGCGGAAGTCAAGTCACATT +
Preference number: 4 (lower is better)
Translates to: PRLQASAPIKIRRKASSHGAPAR*RKSSHI
Trigger: AATGTGACTTGACTTCCGGCAGCGCGCAGGTGCTCC...GTGGGAAGATGCCTTACGTCTGATCTTGATGGGGGCACTGGCCTGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR CCA 90 bp ATCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCGGGCCACCGTCCAGGTaGAACAGGCACAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: IGESDGISGDRAQHFPGSGPPSR*NRHRHR
Trigger: CCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCC...GCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp GAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCCCAGCCGGGAGACCATaGAAGGGAACTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: EQAQASGNQMVSVGIGHSPAGRP*KGTGAT
Trigger: AGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGG...GCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp AATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGCAGGGGGTGTCTTCCCCACCAGTCCTGCATTTCCTaGCACCCAACTGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: NQNPPRAGHGPGRGCLPHQSCIS*HPTGAR
Trigger: ACGGGCTCCAGTTGGGTGCCAGGAAATGCAGGACTG...GTGGGGAAGACACCCCCTGCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR TCA 90 bp ATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGCAGGGGGTGTCTTCCCCACATCCTTCAGCCACTGCTaGGCCTTGAGGAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: IRIHLELAMAQAGGVFPTSFSHC*ALRKES
Trigger: GGATTCCTTCCTCAAGGCTCAGCAGTGGCTGAAGGA...TGTGGGGAAGACACCCCCTGCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp CTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTGGCCATCCTCCCGCTCCTGGCTaGGGTCCGTCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGSNPALTVNQNPPRAGHPPAPG*GPSCCP
Trigger: TGGGCAACAAGACGGACCTCAGCCAGGAGCGGGAGG...ATGGCCAGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp TGGGCCCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCTTGGGCCACTGTATTaGACACCTCCGACACCTGGT +
Preference number: 4 (lower is better)
Translates to: WAHPTVSHRSISSWHHHLLGPLY*TPPTPG
Trigger: ACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAG...GAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp CCCAGGCTCCAGGCCAGTGCCCCCATCAAGATCAGACGTAAGGCATCTTCCCACCATCCACCACCTTTGTaGAGAACGCACCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PRLQASAPIKIRRKASSHHPPPL*RTHRRA
Trigger: GGCTCTTCGGTGCGTTCTTCACAAAGGTGGTGGATG...GTGGGAAGATGCCTTACGTCTGATCTTGATGGGGGCACTGGCCTGGAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414278.1
CDS-3UTR GCA 90 bp ATCTTCCCACCGTCGCTGTGCTGCGGGGACTTTTCCAATCCTTCCTTCCTCTCTCCAGGCCCGGTCACTTaGAGGGAGCTGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: IFPPSLCCGDFSNPSFLSPGPVT*RELKSL
Trigger: CAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGG...AGAGAGGAAGGAAGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGACTTCTCCTGGGTaGAGCTCCTCCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RPGGTGTGIGESDGISGDRTSPG*SSSSRS
Trigger: GGACCTGGAGGAGGAGCTGCACCCAGGAGAAGTCCT...ATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp ACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACAGGACTTCTCCTGGGTaGAGCTCCTCCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TALSWEPCDARSSSGSSHRTSPG*SSSSRS
Trigger: GGACCTGGAGGAGGAGCTGCACCCAGGAGAAGTCCT...GTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp CCACTGGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTGGGAACTGGCGCCACTaGCCCCAGCTGCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PLAVGSGFHKGGQLPGTSGNWRH*PQLPFP
Trigger: TGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCC...AGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp GAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCCAGAGCAATGCCCACTaGACCCCAGCGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: EQAQASGNQMVSVGIGHSQSNAH*TPAPRS
Trigger: TGACCTTGGCGCTGGGGTCCAGTGGGCATTGCTCTG...GCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACTGGCTGTGGGGCTTTCTCCTCTCTCTaGTCCAGGGGAAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PGSHVTPDLPLAVPTGCGAFSSL*SRGRFA
Trigger: AGCAAACCTTCCCCTGGACCAGAGAGAGGAGAAAGC...CCCACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp ATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGATTGAACACACGGGGCTaGCTGGGGGCAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IFLLIGQKLSFTTLPAGRLNTRG*LGAALG
Trigger: GCCCAGGGCTGCCCCCAGCCAGCCCCGTGTGTTCAA...TCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCAGGTGGCAGACGCTGTaGTACTTCTCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHSQSSLHFFLAPPPPSGRWQTL*YFSWPA
Trigger: AGCTGGCCAGGAGAAGTACCACAGCGTCTGCCACCT...GCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000414278.1
CDS-3UTR CCA 90 bp AGTGGGGATAGGGCACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTGTCACCTCCCGCTCCTaGCTGAGGTCCGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SGDRAQHFPGSHVTPDLPVTSRS*LRSVLL
Trigger: CAACAAGACGGACCTCAGCCAGGAGCGGGAGGTGAC...AGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp GCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCAACACCTCCGACACCTaGTGGTTCAGTTTGGCCGAA +
Preference number: 4 (lower is better)
Translates to: AALPRGNFTKMWKSWAHPNTSDT*WFSLAE
Trigger: TTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTT...GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp GAGGGGGCCACCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTAAACACCTCCGACACCTaGTGGTTCAGTTTGGCCGAA +
Preference number: 4 (lower is better)
Translates to: EGATVQVEQAQASGNQMVNTSDT*WFSLAE
Trigger: TTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTT...TACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCAGTGGGCGCAGCATTTaGCCTGCCTCGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LWEVVFIKGANFQEHLGLSGRSI*PASRAP
Trigger: AGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCACT...GAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp AGAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGTGGGCGCAGCATTTaGCCTGCCTCGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RIFLLIGQKLSFTTLPAGSGRSI*PASRAP
Trigger: AGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCACT...CCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp TCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCACAGCCCCCAGGAGTaGCTGCACCTAGTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SSCSLDRNSASPHCQPGDHSPQE*LHLVGA
Trigger: TGCGCCCACTAGGTGCAGCCACTCCTGGGGGCTGTG...GTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTGGCCATCACAGCCCCCAGGAGTaGCTGCACCTAGTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LGSNPALTVNQNPPRAGHHSPQE*LHLVGA
Trigger: TGCGCCCACTAGGTGCAGCCACTCCTGGGGGCTGTG...ATGGCCAGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp GAGGGGGCCACCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCTGGCAGTTCCCACTaGCTGTGGGAAGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: EGATVQVEQAQASGNQMVSGSSH*LWEVVF
Trigger: GAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGA...TACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGAGGCACAGCACTTTCCTaGGAGCCATGTGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: PSRWNRHRHRGIRWYQWGGTALS*EPCDAR
Trigger: TCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCC...TCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp GCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATGGGCCACCGTCCAGGTaGAACAGGCACAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: ANFQEHLGLGSNPALTVNGPPSR*NRHRHR
Trigger: CCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCC...ATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTGGGCCACCGTCCAGGTaGAACAGGCACAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LGLGSNPALTVNQNPPRAGPPSR*NRHRHR
Trigger: CCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCC...AGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp ATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGACAGCGTTGGCACCCCTaGAGTAGAGGTGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: IGQKLSFTTLPAGRPWKGQRWHP*SRGGRR
Trigger: GCGTCTGCCACCTCTACTTCAGGGGTGCCAACGCTG...TCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000414278.1
CDS-3UTR TCA 90 bp TGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGACAGCGTTGGCACCCCTaGAGTAGAGGTGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: CSLDRNSASPHCQPGDHGQRWHP*SRGGRR
Trigger: GCGTCTGCCACCTCTACTTCAGGGGTGCCAACGCTG...TCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000414278.1
CDS-3UTR TCA 90 bp AATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGCAGGGGGTGTCTTCCCCACAGGAATCCTTCCTGGTaGTGTCGTACACCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: NQNPPRAGHGPGRGCLPHRNPSW*CRTPEA
Trigger: CGCTTCTGGTGTACGACATCACCAGGAAGGATTCCT...GTGGGGAAGACACCCCCTGCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp AACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGCCTCCCGCTCCTGGCTaGGGTCCGTCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: NFQEHLGLGSNPALTVNQPPAPG*GPSCCP
Trigger: TGGGCAACAAGACGGACCTCAGCCAGGAGCGGGAGG...CTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp CCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCCCTTGGGCCACTGTATTaGACACCTCCGACACCTGGT +
Preference number: 4 (lower is better)
Translates to: PTVSHRSISSWHHHLHLALGPLY*TPPTPG
Trigger: ACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAG...GGCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp ACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACTTCCTGGGAGCCATGTaGCGCCAGATCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TALSWEPCDARSSSGSSHFLGAM*RQIFLW
Trigger: CCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAA...GTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp AACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGGCGCAGCATTTGGCCTaGCTCGCGGGCCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: NFQEHLGLGSNPALTVNQAQHLA*LAGPLF
Trigger: GAACAAGGGGCCCGCGAGGCAGGCCAAATGCTGCGC...CTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp GGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTGGCCCACCGTCGCTGTGCTaGGGGGACTTTTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: GLGSNPALTVNQNPPRAGPPSLC*GDFSNP
Trigger: AGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGG...GCCAGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp ACCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGCAAGCTTCAGAGAGGTaGCACCCACATCCACCACCT +
Preference number: 4 (lower is better)
Translates to: TVQVEQAQASGNQMVSVGQASER*HPHPPP
Trigger: AGGTGGTGGATGTGGGTGCCACCTCTCTGAAGCTTG...CCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp TTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACTGGCTGTAACTCCTTCCCTTCCTaGAAGGTCACCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: FPGSHVTPDLPLAVPTGCNSFPS*KVTSRS
Trigger: GGAGCGGGAGGTGACCTTCCAGGAAGGGAAGGAGTT...ACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp TTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCATGAACAGCAACTTCTaGCTGTCGGCAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: FTTLPAGRPWKGTGATAPMNSNF*LSANSF
Trigger: GAAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCAT...GGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp GCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCACAAAGATGTGGAAATCCTaGGCCCACCCCACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: ALPRGNFTKMWKSWAHPTKMWKS*AHPTVS
Trigger: ACTGACTGTGGGGTGGGCCCAGGATTTCCACATCTT...TGTGGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGTCCACAGTGGTCATGTaGTCACCTGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGGTGTGIGESDGISGDRSTVVM*SPEAGQ
Trigger: CTGCCCTGCCTCAGGTGACCACATGACCACTGTGGA...CCTATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000409822.1
CDS-3UTR TCA 90 bp CGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATTCCTTCAGCCACTGCTaGGCCTTGAGGAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: RPGGTGTGIGESDGISGDSFSHC*ALRKES
Trigger: GGATTCCTTCCTCAAGGCTCAGCAGTGGCTGAAGGA...ATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp CTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCATGGCCGAAGTTTCCATaGACAGCAACTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPFPGATSPRCGNPGPTPWPKFP*TATSGC
Trigger: ACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCA...TGGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp CGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATCTTGGGCCACTGTATTaGACACCTCCGACACCTGGT +
Preference number: 4 (lower is better)
Translates to: RPGGTGTGIGESDGISGDLGPLY*TPPTPG
Trigger: ACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAG...ATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp GATAGGGCACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCACATCCACCACCTTTGTaGAGAACGCACCTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: DRAQHFPGSHVTPDLPLAHPPPL*RTHLFP
Trigger: GGGGAACAGGTGCGTTCTTCACAAAGGTGGTGGATG...TGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409822.1
CDS-3UTR GCA 90 bp ATCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCGTCCAGGGGAAGGTTTaGTTCCCTCCACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: IGESDGISGDRAQHFPGSVQGKV*FPPQAG
Trigger: TCCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGAC...GCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp GGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCCCACCGTCGCTGTGCTaGGGGGACTTTTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: GFHKGGQLPGTSRAREQPPPSLC*GDFSNP
Trigger: AGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGG...GGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp TTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTCCCACTGGCTGTTTCCCACCGTCGCTGTaGTGCGGGGACTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: FPGSHVTPDLPLAVPTGCFPPSL*CGDFSN
Trigger: ATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGAA...ACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp ATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGACAGAGCAATGCCCACTaGACCCCAGCGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: IGQKLSFTTLPAGRPWKGQSNAH*TPAPRS
Trigger: TGACCTTGGCGCTGGGGTCCAGTGGGCATTGCTCTG...TCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp ACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGCTTTCTCCTCTCTCTaGTCCAGGGGAAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TAPSCPSQGQLHQDVEILAFSSL*SRGRFA
Trigger: AGCAAACCTTCCCCTGGACCAGAGAGAGGAGAAAGC...CAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATAGGCAAGCTTCAGAGAGGTaGCACCCACATCCACCACCT +
Preference number: 4 (lower is better)
Translates to: PGGTGTGIGESDGISGDRQASER*HPHPPP
Trigger: AGGTGGTGGATGTGGGTGCCACCTCTCTGAAGCTTG...CCTATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp GTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGTCACCTCCCGCTCCTaGCTGAGGTCCGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VFIKGANFQEHLGLGSNPVTSRS*LRSVLL
Trigger: CAACAAGACGGACCTCAGCCAGGAGCGGGAGGTGAC...TGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp ACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGTCTGGCAGTTCCCACTaGCTGTGGGAAGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TAPSCPSQGQLHQDVEILSGSSH*LWEVVF
Trigger: GAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGA...CAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCCGCCAGATCTTCCTCTaGCAGTTCCCACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPAHWTETQLHHIASRETRQIFL*QFPLAV
Trigger: CACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCG...GGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp GAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGGCAGGGCAGGAGGCTaGACCTCAAAGCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: ESSCSLDRNSASPHCQPGGRAGG*TSKQVT
Trigger: GGTCACCTGCTTTGAGGTCCAGCCTCCTGCCCTGCC...TCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR TCA 90 bp CTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCTCCTTCAGCCACTGCTaGGCCTTGAGGAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LPAHWTETQLHHIASRETSFSHC*ALRKES
Trigger: GGATTCCTTCCTCAAGGCTCAGCAGTGGCTGAAGGA...GGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000414278.1
CDS-3UTR TCA 90 bp CCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCTGGCCGAAGTTTCCATaGACAGCAACTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PHSQSSLHFFLAPPPPSGWPKFP*TATSGC
Trigger: ACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCA...GCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCTCCTCGTCGCTTCTCTaGAGTAGCTCTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: LPAHWTETQLHHIASRETSSSLL*SSSWAT
Trigger: AGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGA...GGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp TCAGATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCCATGTGACGTCAGCTTCACCACATTaGCAGCCGGGAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: SDGISGDRAQHFPGSHVTSASPH*QPGDHG
Trigger: TCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGA...CGTCACATGGCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp GTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGATATCAGCTTCACCACATTaGCAGCCGGGAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: VQVEQAQASGNQMVSVGISASPH*QPGDHG
Trigger: TCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGA...TATCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGAGTCACATTCCAGTCCTaGATTTCCTGGCACCCAACT +
Preference number: 4 (lower is better)
Translates to: PSRWNRHRHRGIRWYQWGVTFQS*ISWHPT
Trigger: AGTTGGGTGCCAGGAAATGCAGGACTGGAATGTGAC...TCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR CCA 90 bp CAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACAGAGCAATGCCCACTaGACCCCAGCGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QEHLGLGSNPALTVNQNPQSNAH*TPAPRS
Trigger: TGACCTTGGCGCTGGGGTCCAGTGGGCATTGCTCTG...TGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCAGGTGGCAGACGCTGTaGTACTTCTCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGTSRAREQPSIDSESESRWQTL*YFSWPA
Trigger: AGCTGGCCAGGAGAAGTACCACAGCGTCTGCCACCT...GGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp ACAGTGAATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGCAGGGGGTGTCTTACCTCCGACACCTGGTaGTTCAGTTTGGCCGAAGTT +
Preference number: 4 (lower is better)
Translates to: TVNQNPPRAGHGPGRGCLTSDTW*FSLAEV
Trigger: AACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGT...AAGACACCCCCTGCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGATTCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp GCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCGCCAGATCTTCCTCTaGCAGTTCCCACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ANFQEHLGLGSNPALTVNRQIFL*QFPLAV
Trigger: CACAGCCAGTGGGAACTGCCAGAGGAAGATCTGGCG...ATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp AAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAAACTTCACCAAGATGTaGAAATCCTGGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: KGANFQEHLGLGSNPALTNFTKM*KSWAHP
Trigger: GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTT...TGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp GCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATTCACTTGCAGGGAGCTaGAGAGCCTGTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: ANFQEHLGLGSNPALTVNSLAGS*RACHHQ
Trigger: CTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGA...ATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp AGGGCACAGCACTTTCCTGGGAGCCATGTGACGCCAGATCTTCCTCTGGCAGTTTGGCCGAAGTTTCCATaGACAGCAACTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RAQHFPGSHVTPDLPLAVWPKFP*TATSGC
Trigger: ACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCA...AACTGCCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp ACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGACCAGTCCACAGCGTTaGTACCTGTCTCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TETQLHHIASRETMEGNWTSPQR*YLSPLS
Trigger: AGAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGT...CCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp GGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTCCTCGTCGCTTCTCTaGAGTAGCTCTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GTSRAREQPSIDSESESTSSSLL*SSSWAT
Trigger: AGTGGCCCAAGAGCTACTGCAGAGAAGCGACGAGGA...GGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp CAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCACCGTCGCTGTGCTaGGGGGACTTTTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: QEHLGLGSNPALTVNQNPPPSLC*GDFSNP
Trigger: AGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGG...TGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp GTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCATTCCCACCGTCGCTGTaGTGCGGGGACTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VFIKGANFQEHLGLGSNPFPPSL*CGDFSN
Trigger: ATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGAA...TGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CAGTTTGGCCGAAGTTTCCATGAACAGCAACTTCTGGCTGTCGGCAAACTCCTTCAGGCTCCAGGCCAGTaGCCCCATCAAGATCAGACG +
Preference number: 4 (lower is better)
Translates to: QFGRSFHEQQLLAVGKLLQAPGQ*PHQDQT
Trigger: CGTCTGATCTTGATGGGGGCACTGGCCTGGAGCCTG...AAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAAGGTGGCAGACGCTGTaGTACTTCTCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HLGLGSNPALTVNQNPPRRWQTL*YFSWPA
Trigger: AGCTGGCCAGGAGAAGTACCACAGCGTCTGCCACCT...TCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CAGTTTGGCCGAAGTTTCCATGAACAGCAACTTCTGGCTGTCGGCAAACTCCTTGTCACCTCCCGCTCCTaGCTGAGGTCCGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QFGRSFHEQQLLAVGKLLVTSRS*LRSVLL
Trigger: CAACAAGACGGACCTCAGCCAGGAGCGGGAGGTGAC...AAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCAACTCCTTCCCTTCCTaGAAGGTCACCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LWEVVFIKGANFQEHLGLNSFPS*KVTSRS
Trigger: GGAGCGGGAGGTGACCTTCCAGGAAGGGAAGGAGTT...GAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAAACTCCTTCCCTTCCTaGAAGGTCACCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HLGLGSNPALTVNQNPPRNSFPS*KVTSRS
Trigger: GGAGCGGGAGGTGACCTTCCAGGAAGGGAAGGAGTT...TCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp ATCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCTCTGGCAGTTCCCACTaGCTGTGGGAAGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: IGESDGISGDRAQHFPGSSGSSH*LWEVVF
Trigger: GAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGA...GCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGCACAGCACTTTCCTaGGAGCCATGTGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: LWEVVFIKGANFQEHLGLGTALS*EPCDAR
Trigger: TCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCC...GAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCTCCACAGTGGTCATGTaGTCACCTGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LWEVVFIKGANFQEHLGLSTVVM*SPEAGQ
Trigger: CTGCCCTGCCTCAGGTGACCACATGACCACTGTGGA...GAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000409822.1
CDS-3UTR TCA 90 bp CAGAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGTCACTTGCAGGGAGCTaGAGAGCCTGTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: QNLPAHWTETQLHHIASRSLAGS*RACHHQ
Trigger: CTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGA...CCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp CACTGGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTATTCCTGGGAGCCATGTaGCGCCAGATCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HWLWEVVFIKGANFQEHLFLGAM*RQIFLW
Trigger: CCAGAGGAAGATCTGGCGTCACATGGCTCCCAGGAA...TAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp CTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTACCAGTCCACAGCGTTaGTACCTGTCTCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGLGSNPALTVNQNPPRATSPQR*YLSPLS
Trigger: AGAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGT...AGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR GCA 90 bp GGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCACCAGTCCACAGCGTTaGTACCTGTCTCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GTSRAREQPSIDSESESTTSPQR*YLSPLS
Trigger: AGAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGT...GGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp TCCATGAACAGCAACTTCTGGCTGTCGGCAAACTCCTTCCCTTCCTGGAAGGTCGCTTTCTCCTCTCTCTaGTCCAGGGGAAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SMNSNFWLSANSFPSWKVAFSSL*SRGRFA
Trigger: AGCAAACCTTCCCCTGGACCAGAGAGAGGAGAAAGC...GACCTTCCAGGAAGGGAAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CAGAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGCAAGCTTCAGAGAGGTaGCACCCACATCCACCACCT +
Preference number: 4 (lower is better)
Translates to: QNLPAHWTETQLHHIASRQASER*HPHPPP
Trigger: AGGTGGTGGATGTGGGTGCCACCTCTCTGAAGCTTG...CCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000414278.1
CDS-3UTR CCA 90 bp TCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACACCTCCGACACCTGGTaGTTCAGTTTGGCCGAAGTT +
Preference number: 4 (lower is better)
Translates to: SSCSLDRNSASPHCQPGDTSDTW*FSLAEV
Trigger: AACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGT...GTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp TCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTGGCCTGCTCCCAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAG +
Preference number: 4 (lower is better)
Translates to: SVIAPFLPGTTTSIWPAPSSHWL*EVVFIK
Trigger: CTTTATGAAAACCACTTCCCACAGCCAGTGGGAACT...GGGAGCAGGCCAGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CACTGGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGCACAGCACTTTCCTaGGAGCCATGTGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: HWLWEVVFIKGANFQEHLGTALS*EPCDAR
Trigger: TCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCC...TAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp TCCCACCGTCGCTGTGCTGCGGGGACTTTTCCAATCCTTCCTTCCTCTCTGTCCTCTTGGCTCCTTCCTTaGAGCTGTATGGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: SHRRCAAGTFPILPSSLSSWLLP*SCMESL
Trigger: CAAAGATTCCATACAGCTCCAAGGAAGGAGCCAAGA...GGACAGAGAGGAAGGAAGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR CCA 90 bp AACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGGGGCAAAGTCCACAGTaGTCATGTGGTCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: NFQEHLGLGSNPALTVNQGQSPQ*SCGHLR
Trigger: CCTCAGGTGACCACATGACCACTGTGGACTTTGCCC...CTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000409822.1
CDS-3UTR CCA 90 bp CTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGCAAAGTCCACAGTaGTCATGTGGTCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: LWEVVFIKGANFQEHLGLGQSPQ*SCGHLR
Trigger: CCTCAGGTGACCACATGACCACTGTGGACTTTGCCC...GAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000409822.1
3UTR CAA 72 bp TTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATaGACAGTGAATCAGAATCCACCTAGAGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: FQEHLGLGSNPA*TVNQNPPRAGH
Trigger: ATGGCCAGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp CACTGGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTATCACTTGCAGGGAGCTaGAGAGCCTGTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: HWLWEVVFIKGANFQEHLSLAGS*RACHHQ
Trigger: CTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGA...TAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp AACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAGGAATCCTTCCTGGTaGTGTCGTACACCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: NFQEHLGLGSNPALTVNQRNPSW*CRTPEA
Trigger: CGCTTCTGGTGTACGACATCACCAGGAAGGATTCCT...CTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp CTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTTGGCCGAAGTTTCCATaGACAGCAACTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGLGSNPALTVNQNPPRAWPKFP*TATSGC
Trigger: ACAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCA...AGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR TCA 90 bp AGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAATCCTTCAGCCACTGCTaGGCCTTGAGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: SGFHKGGQLPGTSRAREQSFSHC*ALRKES
Trigger: TGATTCCTTCCTCAAGGCTCAGCAGTGGCTGAAGGA...TTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR CCA 90 bp CATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGAGCCTCTACTCCAATaGAAAACAGCCGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HLGLGSNPALTVNQNPPREPLLQ*KTAAEQ
Trigger: CTGCTCTGCGGCTGTTTTCCATTGGAGTAGAGGCTC...TCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGCTTTCTCCTCTCTCTaGTCCAGGGGAAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LWEVVFIKGANFQEHLGLAFSSL*SRGRFA
Trigger: AGCAAACCTTCCCCTGGACCAGAGAGAGGAGAAAGC...GAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp GGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAAATGAACAGCAACTTCTaGCTGTCGGCAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQLPGTSRAREQPSIDSEMNSNF*LSANSF
Trigger: GAAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCAT...TTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp AGAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGACCTCCGACACCTGGTaGTTCAGTTTGGCCGAAGTT +
Preference number: 4 (lower is better)
Translates to: RIFLLIGQKLSFTTLPAGTSDTW*FSLAEV
Trigger: AACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGT...CCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp AGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAAAAGATGTGGAAATCCTaGGCCCACCCCACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SGFHKGGQLPGTSRAREQKMWKS*AHPTVS
Trigger: ACTGACTGTGGGGTGGGCCCAGGATTTCCACATCTT...TTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCAACTTCACCAAGATGTaGAAATCCTGGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LWEVVFIKGANFQEHLGLNFTKM*KSWAHP
Trigger: GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTT...GAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp TTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCATGTGTGCCTGTGCCATaGCCTGTTCCCCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LEEKLHTQYNLYLRRNVSCVPVP*PVPQAR
Trigger: CCGGGCCTGGGGAACAGGGCATGGCACAGGCACACA...TGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR GCA 90 bp GAGGGGGCCACCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATTTTGGAGGAAAAACTaGATACGCAGTACAACTTAT +
Preference number: 4 (lower is better)
Translates to: EGATVQVEQAQASGNQMVFWRKN*IRSTTY
Trigger: ATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAA...TACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR GCA 90 bp AACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTCCTCCATCTGTGCCATaGCCTGTTCCCCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: NCIRSTTYISGEMSQNLPPPSVP*PVPQAR
Trigger: CCGGGCCTGGGGAACAGGGCATGGCACAGATGGAGG...AGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409576.1
CDS-3UTR CCA 90 bp TGGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGTTCCTGGCACCCAACTaGAGCCCGTTTTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: WLWEVVFIKGANFQEHLGFLAPN*SPFFSF
Trigger: AAAGCTGAAAAACGGGCTCCAGTTGGGTGCCAGGAA...CCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR GCA 90 bp TTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCCCAGGCCCGGTCACTTaGAGGGAGCTGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FGGKTAYAVQLISQAKCLPGPVT*RELKSL
Trigger: CAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGG...GAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR GCA 90 bp ATTTTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTGGGAACTGGCGCCACTaGCCCCAGCTGCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IFGGKTAYAVQLISQAKCGNWRH*PQLPFP
Trigger: TGGGAAGGGCAGCTGGGGGCAGTGGCGCCAGTTCCC...ACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR CCA 90 bp TTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCACCAGCCGGGAGACCATaGAAGGGAACTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: LEEKLHTQYNLYLRRNVSPAGRP*KGTGAT
Trigger: AGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGG...TGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR CCA 90 bp GGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAAAATCTTCCTGCTCATTaGACAGAAACTCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GQLPGTSRAREQPSIDSENLPAH*TETQLH
Trigger: GTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATT...TTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp ATCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCAATCTTCCTGCTCATTaGACAGAAACTCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IGESDGISGDRAQHFPGSNLPAH*TETQLH
Trigger: GTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATT...GCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCCATCTTCCAGGATCTCACTTTaGCACAGAATGTTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PPHSQSSLHFFLAPPPPSSRISL*HRMFFL
Trigger: CAAGAAAAACATTCTGTGCCAAAGTGAGATCCTGGA...AGATGGAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392001.6
3UTR CAA 72 bp ACTGTATTGAACACCTCCGACACCTGGTGGTTCAGTTaGGCCGAAGTTTCCATGAACAGCAACTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TVLNTSDTWWFS*AEVSMNSNFWL
Trigger: CAGCCAGAAGTTGCTGTTCATGGAAACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTTCAATACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTGGCCATGTCTCAGAATCTTCCTaGTCATTGGACAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: LGSNPALTVNQNPPRAGHVSESS*SLDRNS
Trigger: TGAGTTTCTGTCCAATGAGCAGGAAGATTCTGAGAC...ATGGCCAGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp TGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAGTCTCAGAATCTTCCTaGTCATTGGACAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: CSLDRNSASPHCQPGDHGVSESS*SLDRNS
Trigger: TGAGTTTCTGTCCAATGAGCAGGAAGATTCTGAGAC...TCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR GCA 90 bp CCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCGTCTCAGAATCTTCCTaGTCATTGGACAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: PGTSRAREQPSIDSESESVSESS*SLDRNS
Trigger: TGAGTTTCTGTCCAATGAGCAGGAAGATTCTGAGAC...GGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp CACTGGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAATGAACAGCAACTTCTaGCTGTCGGCAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: HWLWEVVFIKGANFQEHLMNSNF*LSANSF
Trigger: GAAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCAT...TAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp CAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCAAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAG +
Preference number: 4 (lower is better)
Translates to: QEHLGLGSNPALTVNQNPSSHWL*EVVFIK
Trigger: CTTTATGAAAACCACTTCCCACAGCCAGTGGGAACT...TGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp AGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAAAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAG +
Preference number: 4 (lower is better)
Translates to: SGFHKGGQLPGTSRAREQSSHWL*EVVFIK
Trigger: CTTTATGAAAACCACTTCCCACAGCCAGTGGGAACT...TTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CCA 90 bp TCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACACAGAATGTTTTTCTTaGCTCCTTCCTTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSCSLDRNSASPHCQPGDTECFS*LLPWSC
Trigger: ACAGCTCCAAGGAAGGAGCCAAGAAAAACATTCTGT...GTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR CCA 90 bp AACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTAACTCCTTCCCTTCCTaGAAGGTCACCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: NCIRSTTYISGEMSQNLPNSFPS*KVTSRS
Trigger: GGAGCGGGAGGTGACCTTCCAGGAAGGGAAGGAGTT...AGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR TCA 90 bp GAATCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAAATATTCCGGTCAGATaGATTAATTCCTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: ESSCSLDRNSASPHCQPGNIPVR*INSSHC
Trigger: ACAGTGGGAGGAATTAATTCATCTGACCGGAATATT...TCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR GCA 90 bp TTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCATCAGCTTCACCACATTaGCAGCCGGGAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: LEEKLHTQYNLYLRRNVSSASPH*QPGDHG
Trigger: TCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGA...TGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR GCA 90 bp ACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGTTTTGGAGGAAAAACTaGATACGCAGTACAACTTAT +
Preference number: 4 (lower is better)
Translates to: TETQLHHIASRETMEGNWFWRKN*IRSTTY
Trigger: ATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAA...CCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR GCA 90 bp ATTTTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCACCACCTCCATCTGTaGCATGCCCTGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: IFGGKTAYAVQLISQAKCHHLHL*HALFPR
Trigger: CCTGGGGAACAGGGCATGGCACAGATGGAGGTGGTG...ACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409576.1
CDS-3UTR CCA 90 bp TTTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTGGCACAGCACTTTCCTaGGAGCCATGTGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: FWRKNCIRSTTYISGEMSGTALS*EPCDAR
Trigger: TCTGGCGTCACATGGCTCCCAGGAAAGTGCTGTGCC...AGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR CCA 90 bp TGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAACTTCACCAAGATGTaGAAATCCTGGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: WRKNCIRSTTYISGEMSQNFTKM*KSWAHP
Trigger: GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTT...CTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR TCA 90 bp AGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATTCACTTGCAGGGAGCTaGAGAGCCTGTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: RKNCIRSTTYISGEMSQNSLAGS*RACHHQ
Trigger: CTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGA...ATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR GCA 90 bp TTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAACCAGTCCACAGCGTTaGTACCTGTCTCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LEEKLHTQYNLYLRRNVSTSPQR*YLSPLS
Trigger: AGAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGT...TGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR CCA 90 bp AACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTAAGATGTGGAAATCCTaGGCCCACCCCACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: NCIRSTTYISGEMSQNLPKMWKS*AHPTVS
Trigger: ACTGACTGTGGGGTGGGCCCAGGATTTCCACATCTT...AGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000414278.1
CDS-3UTR CCA 90 bp TTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAACTTCACCAAGATGTaGAAATCCTGGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: FGGKTAYAVQLISQAKCLNFTKM*KSWAHP
Trigger: GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTT...GAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR TCA 90 bp ATTTTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTTCACTTGCAGGGAGCTaGAGAGCCTGTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: IFGGKTAYAVQLISQAKCSLAGS*RACHHQ
Trigger: CTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGA...ACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR GCA 90 bp ATTTTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTTTCCCACCGTCGCTGTaGTGCGGGGACTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: IFGGKTAYAVQLISQAKCFPPSL*CGDFSN
Trigger: ATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGAA...ACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR CCA 90 bp AGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATGCTTTCTCCTCTCTCTaGTCCAGGGGAAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RKNCIRSTTYISGEMSQNAFSSL*SRGRFA
Trigger: AGCAAACCTTCCCCTGGACCAGAGAGAGGAGAAAGC...ATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR CCA 90 bp TTTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTTCTGGCAGTTCCCACTaGCTGTGGGAAGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FWRKNCIRSTTYISGEMSSGSSH*LWEVVF
Trigger: GAAAACCACTTCCCACAGCCAGTGGGAACTGCCAGA...AGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR CCA 90 bp AACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTATGAACAGCAACTTCTaGCTGTCGGCAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: NCIRSTTYISGEMSQNLPMNSNF*LSANSF
Trigger: GAAGGAGTTTGCCGACAGCCAGAAGTTGCTGTTCAT...AGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CCA 90 bp TTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAAGTTCCCACTGGCTGTaGGAAGTGGTTTTCATAAAG +
Preference number: 4 (lower is better)
Translates to: LEEKLHTQYNLYLRRNVSSSHWL*EVVFIK
Trigger: CTTTATGAAAACCACTTCCCACAGCCAGTGGGAACT...TGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR GCA 90 bp TTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCGTCTCAGAATCTTCCTaGTCATTGGACAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: FGGKTAYAVQLISQAKCLVSESS*SLDRNS
Trigger: TGAGTTTCTGTCCAATGAGCAGGAAGATTCTGAGAC...GAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR CCA 90 bp TTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAAATCTTCCTGCTCATTaGACAGAAACTCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LEEKLHTQYNLYLRRNVSNLPAH*TETQLH
Trigger: GTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATT...TGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR CCA 90 bp AACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTAATCTTCCTGCTCATTaGACAGAAACTCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: NCIRSTTYISGEMSQNLPNLPAH*TETQLH
Trigger: GTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGATT...AGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000414278.1
CDS-3UTR GCA 90 bp ATTTTTGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTTTTTGGAGGAAAAACTaGATACGCAGTACAACTTAT +
Preference number: 4 (lower is better)
Translates to: IFGGKTAYAVQLISQAKCFWRKN*IRSTTY
Trigger: ATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAA...ACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS CCA 90 bp TTACTGGGAGTCCGATGCATCCCTGCCAGCTTCCAGCGATGCAGCTaGGCTCTGGGAACCCCTAGAGCCCTGGGCACCCCCGGCCTACCG +
Preference number: 5 (lower is better)
Translates to: LLGVRCIPASFQRCS*ALGTPRALGTPGLP
Trigger: CGGTAGGCCGGGGGTGCCCAGGGCTCTAGGGGTTCCCAGAGCCCAGCTGCATCGCTGGAAGCTGGCAGGGATGCATCGGACTCCCAGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp CACATGCGGCTCAGGTGGGACCACGGCAAGCCGCAGGCACAGCAATaGGCTCAGAGGGACAGCTGGCCATGCATCTCCCACGCCCGCATG +
Preference number: 5 (lower is better)
Translates to: HMRLRWDHGKPQAQQ*AQRDSWPCISHARM
Trigger: CATGCGGGCGTGGGAGATGCATGGCCAGCTGTCCCTCTGAGCCCATTGCTGTGCCTGCGGCTTGCCGTGGTCCCACCTGAGCCGCATGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS TCA 90 bp AATCCAACTGGCCATGGGCGCACCTGCAGGGCTGCTCCGTTCCTCTaGGGAGGGCACGTTCCTGTCCTGGGTGACCTGTGCGGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: NPTGHGRTCRAAPFL*GGHVPVLGDLCGQA
Trigger: TGCCTGGCCGCACAGGTCACCCAGGACAGGAACGTGCCCTCCTCAGAGGAACGGAGCAGCCCTGCAGGTGCGCCCATGGCCAGTTGGATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp GCCTCCTCCAGCTTCAGGGGCTGCCGGCAACCCTGGTGTTCCTGGTaGCTGCATCACCCCCATCTCTGGCTCTGTCTTCACGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ASSSFRGCRQPWCSW*LHHPHLWLCLHVAA
Trigger: GGCAGCCACGTGAAGACAGAGCCAGAGATGGGGGTGATGCAGCCACCAGGAACACCAGGGTTGCCGGCAGCCCCTGAAGCTGGAGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 90 bp AGCCGCAGAGCAGAGGTCAAGAGCAGCAGCCTCGGACCAGAGCAATaGCCACTGGACCCCAGCGCCAAGGTCAGGCCTCTTCTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SRRAEVKSSSLGPEQ*PLDPSAKVRPLLLP
Trigger: TGGGAGGAGAAGAGGCCTGACCTTGGCGCTGGGGTCCAGTGGGCATTGCTCTGGTCCGAGGCTGCTGCTCTTGACCTCTGCTCTGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000411462.5
ENST00000416106.1
ENST00000487008.1
CDS-3UTR CAA 90 bp GAGGGGGCCACCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTAGGTCCAGGGGAAGGTTaGCTTCCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: EGATVQVEQAQASGNQMVGPGEG*LPSTGR
Trigger: CCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGACC...TACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGGTGGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp AATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGCAGGGGGTGTCTTCCCCACCCCAGGCCCGGTCACTaGCAGGGAGCTGAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: NQNPPRAGHGPGRGCLPHPRPGH*QGAEEP
Trigger: AGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGG...GTGGGGAAGACACCCCCTGCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp CGCCACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCCAGGCCCGGTCACTaGCAGGGAGCTGAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: RHCPQLPFPGATSPRCGNPRPGH*QGAEEP
Trigger: AGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGG...ATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS GCA 90 bp AGGAGGCTGGACCTCAAAGCAGGTGACCCGGGAGCACCTGCGCGCTaGCGGAAGTCAAGTCACATTCCAGTCCTGCATTTCCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: RRLDLKAGDPGAPAR*RKSSHIPVLHFLAP
Trigger: GGGTGCCAGGAAATGCAGGACTGGAATGTGACTTGACTTCCGGCAGCGCGCAGGTGCTCCCGGGTCACCTGCTTTGAGGTCCAGCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000487008.1
CDS CCA 90 bp GAGCAGAGGTCAAGAGCAGCAGCCTCGGACCAGAGCAATGCCCACTaGACCCCAGCGCCAAGGTCAGGCCTCTTCTCCTCCCAGAAGGTT +
Preference number: 5 (lower is better)
Translates to: EQRSRAAASDQSNAH*TPAPRSGLFSSQKV
Trigger: AACCTTCTGGGAGGAGAAGAGGCCTGACCTTGGCGCTGGGGTCCAGTGGGCATTGCTCTGGTCCGAGGCTGCTGCTCTTGACCTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000411462.5
ENST00000416106.1
ENST00000487008.1
CDS CCA 90 bp TATACACAGAACTGGAGAGGACGGGGCGGGGGAAGGCAAGGTGTCTaGGGCATGGAGGAGCCACCAGCACCGACAGGCTCCTGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: YTQNWRGRGGGRQGV*GMEEPPAPTGSCQS
Trigger: GCTTTGACAGGAGCCTGTCGGTGCTGGTGGCTCCTCCATGCCCCAGACACCTTGCCTTCCCCCGCCCCGTCCTCTCCAGTTCTGTGTATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp CCTGCAGGGCTGCTCCGTTCCTCTGAGGAGGGCACGTTCCTGTCCTaGGTGACCTGTGCGGCCAGGCAGAAAACTGCTAGGACACACATC +
Preference number: 5 (lower is better)
Translates to: PAGLLRSSEEGTFLS*VTCAARQKTARTHI
Trigger: GATGTGTGTCCTAGCAGTTTTCTGCCTGGCCGCACAGGTCACCCAGGACAGGAACGTGCCCTCCTCAGAGGAACGGAGCAGCCCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS-3UTR CAA 90 bp GTCGTACACCAGAAGCGCAGCGTTGGCACCCCTGAAGTAGAGGTGGCAGACGCTGGTCCAGGGGAAGGTTaGCTTCCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VVHQKRSVGTPEVEVADAGPGEG*LPSTGR
Trigger: CCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGACC...AGCGTCTGCCACCTCTACTTCAGGGGTGCCAACGCTGCGCTTCTGGTGTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414278.1
CDS-3UTR CAA 90 bp CACCACATTGCCAGCCGGGAGACCATGGAAGGGAACTGGCGCCACTGCCCCCAGTCTTGGGCCACTGTATaGAACACCTCCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: HHIASRETMEGNWRHCPQSWATV*NTSDTW
Trigger: CCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGA...CTGGGGGCAGTGGCGCCAGTTCCCTTCCATGGTCTCCCGGCTGGCAATGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS GCA 90 bp ACCACCTCCATCTGTGCCATGCCCTGTTCCCCAGGCCCGGTCACTTaGAGGGAGCTGAAGAGCCTGTCATCACCAGTCCACAGCGTTGCT +
Preference number: 5 (lower is better)
Translates to: TTSICAMPCSPGPVT*RELKSLSSPVHSVA
Trigger: AGCAACGCTGTGGACTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGGGAACAGGGCATGGCACAGATGGAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409576.1
CDS-3UTR CAA 90 bp TCGGGGAATCAGATGGTATCAGTGGGGATAGGGCACAGCACTTTCCTGGGAGCCCCCAGGCCCGGTCACTaGCAGGGAGCTGAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: SGNQMVSVGIGHSTFLGAPRPGH*QGAEEP
Trigger: AGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGG...GGCTCCCAGGAAAGTGCTGTGCCCTATCCCCACTGATACCATCTGATTCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp GGCTCCAGGCCAGTGCCCCCATCAAGATCAGACGTAAGGCATCTTCCCACCGTCCTCAGCTTCACCACATaGCCAGCCGGGAGACCATGG +
Preference number: 5 (lower is better)
Translates to: GSRPVPPSRSDVRHLPTVLSFTT*PAGRPW
Trigger: CCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAG...GACGGTGGGAAGATGCCTTACGTCTGATCTTGATGGGGGCACTGGCCTGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CAA 90 bp AGCCCCCAGGAGTGGCTGCACCTAGTGGGCGCAGCATTTGGCCTGCCTCGCGGGCACAGAATGTTTTTCTaGGCTCCTTCCTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SPQEWLHLVGAAFGLPRGHRMFF*APSLEL
Trigger: CAGCTCCAAGGAAGGAGCCAAGAAAAACATTCTGTG...CCCGCGAGGCAGGCCAAATGCTGCGCCCACTAGGTGCAGCCACTCCTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS TCA 90 bp CAGGGCTGCTCCGTTCCTCTGAGGAGGGCACGTTCCTGTCCTGGGTaGCCTGTGCGGCCAGGCAGAAAACTGCTAGGACACACATCAGAT +
Preference number: 5 (lower is better)
Translates to: QGCSVPLRRARSCPG*PVRPGRKLLGHTSD
Trigger: ATCTGATGTGTGTCCTAGCAGTTTTCTGCCTGGCCGCACAGGTCACCCAGGACAGGAACGTGCCCTCCTCAGAGGAACGGAGCAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 90 bp GCTACCTGTCTCCGCTTTCTCCTCTCTCTGGTCCAGGGGAAGGTTTaGTTCCCTCCACAGGCAGGACAGGACAGGAGGAGCCTCTACTCC +
Preference number: 5 (lower is better)
Translates to: ATCLRFLLSLVQGKV*FPPQAGQDRRSLYS
Trigger: GGAGTAGAGGCTCCTCCTGTCCTGTCCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGACCAGAGAGAGGAGAAAGCGGAGACAGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000409822.1
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
ENST00000487008.1
CDS GCA 90 bp CGCCAGCCTCTAGTGTGTGTGGGGTCTCCCCATCAGCCACTTGTCTaGAGCTGTTTACACGGTCTTCGTCCTGGAAGGTCACCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: RQPLVCVGSPHQPLV*SCLHGLRPGRSPPA
Trigger: AGCGGGAGGTGACCTTCCAGGACGAAGACCGTGTAAACAGCTGCAGACAAGTGGCTGATGGGGAGACCCCACACACACTAGAGGCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430445.1
CDS GCA 90 bp GGAGGAGCCACCAGCACCGACAGGCTCCTGTCAAAGCTGCTACCCTaGCTAGACCCTGGATTGGGTTTGGGGTCTGTTGGGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: GGATSTDRLLSKLLP*LDPGLGLGSVGEIL
Trigger: CAGAATCTCCCCAACAGACCCCAAACCCAATCCAGGGTCTAGGCAGGGTAGCAGCTTTGACAGGAGCCTGTCGGTGCTGGTGGCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp CTTCCCTCCACAGGCAGGACAGGACAGGAGGAGCCTCTACTCCAATaGAAAACAGCCGCAGAGCAGAGGTCAAGAGCAGCAGCCTCGGAC +
Preference number: 5 (lower is better)
Translates to: LPSTGRTGQEEPLLQ*KTAAEQRSRAAASD
Trigger: GTCCGAGGCTGCTGCTCTTGACCTCTGCTCTGCGGCTGTTTTCCATTGGAGTAGAGGCTCCTCCTGTCCTGTCCTGCCTGTGGAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
ENST00000487008.1
CDS-3UTR CAA 90 bp ATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGCAGGGGGTGTCTTCCCCACACACCAGTCCACAGCGTaGCTACCTGTCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: IRIHLELAMAQAGGVFPTHQSTA*LPVSAF
Trigger: GAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGTG...TGTGGGGAAGACACCCCCTGCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp GCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATCCTGGGCCCACCCCTCTTGGGCCACTGTATaGAACACCTCCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: AALPRGNFTKMWKSWAHPSWATV*NTSDTW
Trigger: CCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGA...GGGGTGGGCCCAGGATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS TCA 90 bp TGCCTGTTGGCACCTGTGGGCTTTGATGCTGGGCAAAGAACCAACTaGGAACCCAGGAAACATGAGGCAGAGGGAGGCCCCTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: CLLAPVGFDAGQRTN*EPRKHEAEGGPWTA
Trigger: TGCCGTCCAGGGGCCTCCCTCTGCCTCATGTTTCCTGGGTTCTCAGTTGGTTCTTTGCCCAGCATCAAAGCCCACAGGTGCCAACAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466244.1
CDS-3UTR CAA 90 bp ACCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGCACCAGTCCACAGCGTaGCTACCTGTCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: TVQVEQAQASGNQMVSVGHQSTA*LPVSAF
Trigger: GAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGTG...CCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp CGCCACTGCCCCCAGCTGCCCTTCCCAGGGGCAACTTCACCAAGATGTGGAAATTCTTGGGCCACTGTATaGAACACCTCCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: RHCPQLPFPGATSPRCGNSWATV*NTSDTW
Trigger: CCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGA...ATTTCCACATCTTGGTGAAGTTGCCCCTGGGAAGGGCAGCTGGGGGCAGTGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CAA 90 bp AAATCCTGGGCCCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCTCAGCTTCACCACATaGCCAGCCGGGAGACCATGG +
Preference number: 5 (lower is better)
Translates to: KSWAHPTVSHRSISSWHHLSFTT*PAGRPW
Trigger: CCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAG...GTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGGGCCCAGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS GCA 90 bp CACTTGCAGGGAGCTGAAGAGCCTGTCATCACCAGTCCACAGCGTTaGTACCTGTCTCCGCTTTCTCCTCTCTCTGGTCCAGGGGAAGGT +
Preference number: 5 (lower is better)
Translates to: HLQGAEEPVITSPQR*YLSPLSPLSGPGEG
Trigger: ACCTTCCCCTGGACCAGAGAGAGGAGAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000409822.1
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
CDS GCA 90 bp CTGGTGGCTGCATCACCCCCATCTCTGGCTCTGTCTTCACGTGGCTaGCCCTCTGTGGCTGTGTCCTCTCCCCTTCTTATAAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: LVAASPPSLALSSRG*PSVAVSSPLLIRMS
Trigger: TGACATCCTTATAAGAAGGGGAGAGGACACAGCCACAGAGGGGCAGCCACGTGAAGACAGAGCCAGAGATGGGGGTGATGCAGCCACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp CAGCACCGACAGGCTCCTGTCAAAGCTGCTACCCTGCCTAGACCCTaGATTGGGTTTGGGGTCTGTTGGGGAGATTCTGGCAAATGGAGC +
Preference number: 5 (lower is better)
Translates to: QHRQAPVKAATLPRP*IGFGVCWGDSGKWS
Trigger: GCTCCATTTGCCAGAATCTCCCCAACAGACCCCAAACCCAATCCAGGGTCTAGGCAGGGTAGCAGCTTTGACAGGAGCCTGTCGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS-3UTR CAA 90 bp GCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATGGTCCAGGGGAAGGTTaGCTTCCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ANFQEHLGLGSNPALTVNGPGEG*LPSTGR
Trigger: CCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGACC...ATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp GTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACGGTCCAGGGGAAGGTTaGCTTCCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VVFIKGANFQEHLGLGSNGPGEG*LPSTGR
Trigger: CCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGACC...GTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp ACAGTGAATCAGAATCCACCTAGAGCTGGCCATGGCCCAGGCAGGGGGTGTCTTCACCAGTCCACAGCGTaGCTACCTGTCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: TVNQNPPRAGHGPGRGCLHQSTA*LPVSAF
Trigger: GAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGTG...AAGACACCCCCTGCCTGGGCCATGGCCAGCTCTAGGTGGATTCTGATTCACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS GCA 90 bp CGGGAGCACCTGCGCGCTGCCGGAAGTCAAGTCACATTCCAGTCCTaGATTTCCTGGCACCCAACTGGAGCCCGTTTTTCAGCTTTATTC +
Preference number: 5 (lower is better)
Translates to: REHLRAAGSQVTFQS*ISWHPTGARFSALF
Trigger: GAATAAAGCTGAAAAACGGGCTCCAGTTGGGTGCCAGGAAATGCAGGACTGGAATGTGACTTGACTTCCGGCAGCGCGCAGGTGCTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000487008.1
CDS CCA 90 bp GCAGTTCTGGAGGCCAGAGGTCCAAAACTGATGCGTTGGCTGGGTTaGTTCCTTCCGGAGACTGAAGGAGAATCCATTCCAGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: AVLEARGPKLMRWLG*FLPETEGESIPGLL
Trigger: GAGGAGGCCTGGAATGGATTCTCCTTCAGTCTCCGGAAGGAACCAACCCAGCCAACGCATCAGTTTTGGACCTCTGGCCTCCAGAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp CAAAAGCTCTGGGCTACATATGCCGTGAAAGGGATCTCCACTTACTaGGAGTCCGATGCATCCCTGCCAGCTTCCAGCGATGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: QKLWATYAVKGISTY*ESDASLPASSDAAG
Trigger: CCCAGCTGCATCGCTGGAAGCTGGCAGGGATGCATCGGACTCCCAGTAAGTGGAGATCCCTTTCACGGCATATGTAGCCCAGAGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS-3UTR CAA 90 bp CACTGGCTGTGGGAAGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTACCCAGGCCCGGTCACTaGCAGGGAGCTGAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: HWLWEVVFIKGANFQEHLPRPGH*QGAEEP
Trigger: AGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGG...TAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACTTCCCACAGCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp TGGGCCCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCGGGAGCAACCCAGCATaGACAGTGAATCAGAATCCA +
Preference number: 5 (lower is better)
Translates to: WAHPTVSHRSISSWHHHLGSNPA*TVNQNP
Trigger: TGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCC...GAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CAA 90 bp CTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTCTCAGCTTCACCACATaGCCAGCCGGGAGACCATGG +
Preference number: 5 (lower is better)
Translates to: LGLGSNPALTVNQNPPRALSFTT*PAGRPW
Trigger: CCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAG...AGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS GCA 90 bp CCTAAGGACACCTGGTTCACTTCCAACAGTAAGATCCGAGAAAGCTaGAGCCGTGGAGCCCGCACTCCTCCACGTTTCGTGTCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: PKDTWFTSNSKIRES*SRGARTPPRFVSKL
Trigger: CAACTTGGACACGAAACGTGGAGGAGTGCGGGCTCCACGGCTGCAGCTTTCTCGGATCTTACTGTTGGAAGTGAACCAGGTGTCCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466244.1
CDS GCA 90 bp AATCGTCATCGTTTAATGAGTGAGCATTTCAGAGGCCCTTCAGTCTaGACGGGACTCTGTGGTTGCTGGAGCCCTGGACCTGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: NRHRLMSEHFRGPSV*TGLCGCWSPGPGAH
Trigger: GTGAGCCCCAGGTCCAGGGCTCCAGCAACCACAGAGTCCCGTGCAGACTGAAGGGCCTCTGAAATGCTCACTCATTAAACGATGACGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487008.1
CDS CCA 90 bp CTGCGCGCTGCCGGAAGTCAAGTCACATTCCAGTCCTGCATTTCCTaGCACCCAACTGGAGCCCGTTTTTCAGCTTTATTCCGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LRAAGSQVTFQSCIS*HPTGARFSALFRGF
Trigger: GAAACCCCGGAATAAAGCTGAAAAACGGGCTCCAGTTGGGTGCCAGGAAATGCAGGACTGGAATGTGACTTGACTTCCGGCAGCGCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000487008.1
CDS CCA 90 bp CAAACCCTGACCCTAATGCAGCACCAGGAACTACTGAGTGGCAGATaGCAACGGCATGTTCTTTGTGGACCACGGAGGAGCAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: QTLTLMQHQELLSGR*QRHVLCGPRRSRTP
Trigger: TGGGGTTCTGCTCCTCCGTGGTCCACAAAGAACATGCCGTTGCCATCTGCCACTCAGTAGTTCCTGGTGCTGCATTAGGGTCAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS-3UTR CAA 90 bp TCTTCCTGCTCATTGGACAGAAACTCAGCTTCACCACATTGCCAGCCGGGAGACCACCAGTCCACAGCGTaGCTACCTGTCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: SSCSLDRNSASPHCQPGDHQSTA*LPVSAF
Trigger: GAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGTG...GTCTCCCGGCTGGCAATGTGGTGAAGCTGAGTTTCTGTCCAATGAGCAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS-3UTR CAA 90 bp CCGTCCAGGTGGAACAGGCACAGGCATCGGGGAATCAGATGGTATCAGTGGGGAACCTGGTGGTTCAGTTaGGCCGAAGTTTCCATGAAC +
Preference number: 5 (lower is better)
Translates to: PSRWNRHRHRGIRWYQWGTWWFS*AEVSMN
Trigger: GTTCATGGAAACTTCGGCCAAACTGAACCACCAGGT...TCCCCACTGATACCATCTGATTCCCCGATGCCTGTGCCTGTTCCACCTGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp GGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCTCTTGGGCCACTGTATaGAACACCTCCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: GFHKGGQLPGTSRAREQPSWATV*NTSDTW
Trigger: CCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGA...GGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS TCA 90 bp AGATCTCAAGCTTCAGAGAGGTGGCACCCACATCCACCACCTTTGTaGAGAACGCACCTGAAACAGGGAGGCCCAGAGGGCTTACTCAGA +
Preference number: 5 (lower is better)
Translates to: RSQASERWHPHPPPL*RTHLKQGGPEGLLR
Trigger: TCTGAGTAAGCCCTCTGGGCCTCCCTGTTTCAGGTGCGTTCTTCACAAAGGTGGTGGATGTGGGTGCCACCTCTCTGAAGCTTGAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp ATCTCCCACGCCCGCATGGCCAGGAGGTTGAGCAAACAGTTCTTCTaGGAGATGGAGCCTTCCACATCGAGCAAAGTGTTGGGAGTGATT +
Preference number: 5 (lower is better)
Translates to: ISHARMARRLSKQFF*EMEPSTSSKVLGVI
Trigger: AATCACTCCCAACACTTTGCTCGATGTGGAAGGCTCCATCTCCCAGAAGAACTGTTTGCTCAACCTCCTGGCCATGCGGGCGTGGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS-3UTR CAA 90 bp AAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGGGAGCAACCCAGCATaGACAGTGAATCAGAATCCA +
Preference number: 5 (lower is better)
Translates to: KGANFQEHLGLGSNPALTGSNPA*TVNQNP
Trigger: TGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCC...TGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp AAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTAGGCAGGATACTCTaGAAGTCGTTCTTCACGTAC +
Preference number: 5 (lower is better)
Translates to: KGANFQEHLGLGSNPALTVGRIL*KSFFTY
Trigger: GTACGTGAAGAACGACTTCAAGAGTATCCTGCCTAC...TGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR CAA 90 bp ATCTTCCCACCGTCGCTGTGCTGCGGGGACTTTTCCAATCCTTCCTTCCTCTCTACCTGGTGGTTCAGTTaGGCCGAAGTTTCCATGAAC +
Preference number: 5 (lower is better)
Translates to: IFPPSLCCGDFSNPSFLSTWWFS*AEVSMN
Trigger: GTTCATGGAAACTTCGGCCAAACTGAACCACCAGGT...AGAGAGGAAGGAAGGATTGGAAAAGTCCCCGCAGCACAGCGACGGTGGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
CDS CCA 90 bp TTTCTTCCTGCAGTTCTGGAGGCCAGAGGTCCAAAACTGATGCGTTaGCTGGGTTGGTTCCTTCCGGAGACTGAAGGAGAATCCATTCCA +
Preference number: 5 (lower is better)
Translates to: FLPAVLEARGPKLMR*LGWFLPETEGESIP
Trigger: TGGAATGGATTCTCCTTCAGTCTCCGGAAGGAACCAACCCAGCCAACGCATCAGTTTTGGACCTCTGGCCTCCAGAACTGCAGGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS-3UTR CAA 90 bp TGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGCCCAGGCCCGGTCACTaGCAGGGAGCTGAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: WRKNCIRSTTYISGEMSQPRPGH*QGAEEP
Trigger: AGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGG...CTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR CAA 90 bp CCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTGGTGGTTCAGTTaGGCCGAAGTTTCCATGAAC +
Preference number: 5 (lower is better)
Translates to: PGTSRAREQPSIDSESESTWWFS*AEVSMN
Trigger: GTTCATGGAAACTTCGGCCAAACTGAACCACCAGGT...GGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp CTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCTAGAGCTACCTGGTGGTTCAGTTaGGCCGAAGTTTCCATGAAC +
Preference number: 5 (lower is better)
Translates to: LGLGSNPALTVNQNPPRATWWFS*AEVSMN
Trigger: GTTCATGGAAACTTCGGCCAAACTGAACCACCAGGT...AGCTCTAGGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp GGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAATCCACCGGGAGCAACCCAGCATaGACAGTGAATCAGAATCCA +
Preference number: 5 (lower is better)
Translates to: GTSRAREQPSIDSESESTGSNPA*TVNQNP
Trigger: TGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCC...GGTGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS GCA 90 bp CTGGGAGATGGAGCCTTCCACATCGAGCAAAGTGTTGGGAGTGATTaGTATGGGGCCTTTGGAGAGGCTTTGGATGGGAAGATAAATCTC +
Preference number: 5 (lower is better)
Translates to: LGDGAFHIEQSVGSD*YGAFGEALDGKINL
Trigger: GAGATTTATCTTCCCATCCAAAGCCTCTCCAAAGGCCCCATAGCAATCACTCCCAACACTTTGCTCGATGTGGAAGGCTCCATCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp CGGAAGTCAAGTCACATTCCAGTCCTGCATTTCCTGGCACCCAACTaGAGCCCGTTTTTCAGCTTTATTCCGGGGTTTCACTTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: RKSSHIPVLHFLAPN*SPFFSFIPGFHFQD
Trigger: ATCCTGGAAGTGAAACCCCGGAATAAAGCTGAAAAACGGGCTCCAGTTGGGTGCCAGGAAATGCAGGACTGGAATGTGACTTGACTTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000487008.1
CDS-3UTR CAA 90 bp GTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGTAGGCAGGATACTCTaGAAGTCGTTCTTCACGTAC +
Preference number: 5 (lower is better)
Translates to: VFIKGANFQEHLGLGSNPVGRIL*KSFFTY
Trigger: GTACGTGAAGAACGACTTCAAGAGTATCCTGCCTAC...TGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264601.8
ENST00000392001.6
CDS-3UTR CAA 90 bp AACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGGGGAGCAACCCAGCATaGACAGTGAATCAGAATCCA +
Preference number: 5 (lower is better)
Translates to: NFQEHLGLGSNPALTVNQGSNPA*TVNQNP
Trigger: TGGATTCTGATTCACTGTCAATGCTGGGTTGCTCCC...CTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000414278.1
CDS-3UTR CAA 90 bp TGGGCCCACCCCACAGTCAGTCATCGCTCCATTTCTTCCTGGCACCACCACCTCTGTATGGAATCTTTGTaGCACTTGAAAAACCAACAG +
Preference number: 5 (lower is better)
Translates to: WAHPTVSHRSISSWHHHLCMESL*HLKNQQ
Trigger: CTGTTGGTTTTTCAAGTGCAACAAAGATTCCATACA...GAGGTGGTGGTGCCAGGAAGAAATGGAGCGATGACTGACTGTGGGGTGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS TCA 90 bp TTAGCAAATTTCTTCCTGCAGTTCTGGAGGCCAGAGGTCCAAAACTaGTGCGTTGGCTGGGTTGGTTCCTTCCGGAGACTGAAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LANFFLQFWRPEVQN*CVGWVGSFRRLKEN
Trigger: ATTCTCCTTCAGTCTCCGGAAGGAACCAACCCAGCCAACGCATCAGTTTTGGACCTCTGGCCTCCAGAACTGCAGGAAGAAATTTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS TCA 90 bp TCTTCTGGGAGATGGAGCCTTCCACATCGAGCAAAGTGTTGGGAGTaGTTGCTATGGGGCCTTTGGAGAGGCTTTGGATGGGAAGATAAA +
Preference number: 5 (lower is better)
Translates to: SSGRWSLPHRAKCWE*LLWGLWRGFGWEDK
Trigger: TTTATCTTCCCATCCAAAGCCTCTCCAAAGGCCCCATAGCAATCACTCCCAACACTTTGCTCGATGTGGAAGGCTCCATCTCCCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS TCA 90 bp TATAGGTGGTCATTAGCTATTCCGGGAGGGGGAAGCCAGTGTTGCTaGTCACGTTGTGTAAAATGTCACAGAATCCAACTGGCCATGGGC +
Preference number: 5 (lower is better)
Translates to: YRWSLAIPGGGSQCC*SRCVKCHRIQLAMG
Trigger: GCCCATGGCCAGTTGGATTCTGTGACATTTTACACAACGTGATCAGCAACACTGGCTTCCCCCTCCCGGAATAGCTAATGACCACCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS-3UTR CAA 90 bp AACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTGGTCCAGGGGAAGGTTaGCTTCCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: NCIRSTTYISGEMSQNLPGPGEG*LPSTGR
Trigger: CCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGACC...AGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000414278.1
CDS-3UTR CAA 90 bp TGGAGGAAAAACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGCTCAGCTTCACCACATaGCCAGCCGGGAGACCATGG +
Preference number: 5 (lower is better)
Translates to: WRKNCIRSTTYISGEMSQLSFTT*PAGRPW
Trigger: CCATGGTCTCCCGGCTGGCAATGTGGTGAAGCTGAG...CTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTTTTTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
CDS-3UTR CAA 90 bp AGTGGTTTTCATAAAGGGGGCCAACTTCCAGGAACATCTAGGGCTCGGGAGCAATTCTTGGCTCCTTCCTaGGAGCTGTATGGAATCTTT +
Preference number: 5 (lower is better)
Translates to: SGFHKGGQLPGTSRAREQFLAPS*ELYGIF
Trigger: AAAGATTCCATACAGCTCCAAGGAAGGAGCCAAGAA...TTGCTCCCGAGCCCTAGATGTTCCTGGAAGTTGGCCCCCTTTATGAAAACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS TCA 90 bp TTTGTTGCACTTTGCAGTCACTGTCAATCGTCATCGTTTAATGAGTaGGCATTTCAGAGGCCCTTCAGTCTGCACGGGACTCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: FVALCSHCQSSSFNE*AFQRPFSLHGTLWL
Trigger: CAACCACAGAGTCCCGTGCAGACTGAAGGGCCTCTGAAATGCTCACTCATTAAACGATGACGATTGACAGTGACTGCAAAGTGCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487008.1
CDS CCA 90 bp CCACAAAATCCAGCGCTGTTTATAAGAGAGTTTCCTAAGGACACCTaGTTCACTTCCAACAGTAAGATCCGAGAAAGCTGCAGCCGTGGA +
Preference number: 5 (lower is better)
Translates to: PQNPALFIREFPKDT*FTSNSKIRESCSRG
Trigger: TCCACGGCTGCAGCTTTCTCGGATCTTACTGTTGGAAGTGAACCAGGTGTCCTTAGGAAACTCTCTTATAAACAGCGCTGGATTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466244.1
CDS-3UTR CAA 90 bp AACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTCACCAGTCCACAGCGTaGCTACCTGTCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: NCIRSTTYISGEMSQNLPHQSTA*LPVSAF
Trigger: GAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGTG...AGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000414278.1
CDS CCA 90 bp TTTGGATGGGAAGATAAATCTCTCCAGGACCTAATACAAAAGCTCTaGGCTACATATGCCGTGAAAGGGATCTCCACTTACTGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FGWEDKSLQDLIQKL*ATYAVKGISTYWES
Trigger: GGACTCCCAGTAAGTGGAGATCCCTTTCACGGCATATGTAGCCCAGAGCTTTTGTATTAGGTCCTGGAGAGATTTATCTTCCCATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 90 bp GGGGTTTCACTTCCAGGATCTCACTTTGGCACAGAATGTTTTTCTTaGCTCCTTCCTTGGAGCTGTATGGAATCTTTGTTGCACTTTGCA +
Preference number: 5 (lower is better)
Translates to: GVSLPGSHFGTECFS*LLPWSCMESLLHFA
Trigger: TGCAAAGTGCAACAAAGATTCCATACAGCTCCAAGGAAGGAGCCAAGAAAAACATTCTGTGCCAAAGTGAGATCCTGGAAGTGAAACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487008.1
CDS-3UTR CAA 90 bp AACTTCCAGGAACATCTAGGGCTCGGGAGCAACCCAGCATTGACAGTGAATCAGAGCTGTATGGAATCTTaGTTGCACTTGAAAAACCAA +
Preference number: 5 (lower is better)
Translates to: NFQEHLGLGSNPALTVNQSCMES*LHLKNQ
Trigger: TTGGTTTTTCAAGTGCAACAAAGATTCCATACAGCT...CTGATTCACTGTCAATGCTGGGTTGCTCCCGAGCCCTAGATGTTCCTGGAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS CCA 90 bp GGGGTTTCACTTCCAGGATCTCACTTTGGCACAGAATGTTTTTCTTaGCTCCTTCCTTGGAGCTGTATGGAATCTTTGTTGCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: GVSLPGSHFGTECFS*LLPWSCMESLLHLK
Trigger: TTTCAAGTGCAACAAAGATTCCATACAGCTCCAAGGAAGGAGCCAAGAAAAACATTCTGTGCCAAAGTGAGATCCTGGAAGTGAAACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS-3UTR CAA 90 bp AACTGCATACGCAGTACAACTTATATCTCAGGCGAAATGTCTCAGAATCTTCCTGAATCTTTGTTGCACTaGAAAAACCAACAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: NCIRSTTYISGEMSQNLPESLLH*KNQQPR
Trigger: TCTGGGCTGTTGGTTTTTCAAGTGCAACAAAGATTC...AGGAAGATTCTGAGACATTTCGCCTGAGATATAAGTTGTACTGCGTATGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS CCA 72 bp CGGGGTGTGCTCCCTGGAAGAGGCTCTTCCTCTAGCTaGCGGGGTGCGGCCTTCCTCCTCCTGCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: RGVLPGRGSSSS*RGAAFLLLQGL
Trigger: CAGGCCCTGCAGGAGGAGGAAGGCCGCACCCCGCCAGCTAGAGGAAGAGCCTCTTCCAGGGAGCACACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466244.1
CDS TCA 72 bp ACGCACCCACGGAGCCACTTCCCAGGAGAACCAGCTTaGACACACGGGGCTGGCTGGGGGCAGCCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: THPRSHFPGEPA*THGAGWGQPWA
Trigger: AGCCCAGGGCTGCCCCCAGCCAGCCCCGTGTGTTCAAGCTGGTTCTCCTGGGAAGTGGCTCCGTGGGTGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411462.5
CDS TCA 72 bp GGCCATGGGCGCACCTGCAGGGCTGCTCCGTTCCTCTaGGGAGGGCACGTTCCTGTCCTGGGTGACCTGTGC +
Preference number: 6 (lower is better)
Translates to: GHGRTCRAAPFL*GGHVPVLGDLC
Trigger: GCACAGGTCACCCAGGACAGGAACGTGCCCTCCTCAGAGGAACGGAGCAGCCCTGCAGGTGCGCCCATGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 72 bp GCCCAGAGGGCTTACTCAGAGGACGAGGTTGCCACATaGGGCTCAGGTGGGACCACGGCAAGCCGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: AQRAYSEDEVAT*GSGGTTASRRH
Trigger: GTGCCTGCGGCTTGCCGTGGTCCCACCTGAGCCGCATGTGGCAACCTCGTCCTCTGAGTAAGCCCTCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS TCA 72 bp ACTTACCCACGGAGCCACTTCCCAGGAGAACCAGCTTaGACACACGGGGCTGGCTGGGGGCAGCCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: TYPRSHFPGEPA*THGAGWGQPWA
Trigger: AGCCCAGGGCTGCCCCCAGCCAGCCCCGTGTGTTCAAGCTGGTTCTCCTGGGAAGTGGCTCCGTGGGTAAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000414278.1
ENST00000416106.1
CDS TCA 72 bp GTGGGACGTGCCTCAAGGCGGGCCCTACCTTCCTGGTaGTGTCGTACACCAGAAGCGCAGCGTTGGCACCCC +
Preference number: 6 (lower is better)
Translates to: VGRASRRALPSW*CRTPEAQRWHP
Trigger: GGGGTGCCAACGCTGCGCTTCTGGTGTACGACATCACCAGGAAGGTAGGGCCCGCCTTGAGGCACGTCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 72 bp GCAGAGGTCAAGAGCAGCAGCCTCGGACCAGAGCAATaGCCACTGGACCCCAGCGCCAAGGTCAGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: AEVKSSSLGPEQ*PLDPSAKVRPL
Trigger: AAGAGGCCTGACCTTGGCGCTGGGGTCCAGTGGGCATTGCTCTGGTCCGAGGCTGCTGCTCTTGACCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
ENST00000487008.1
CDS GCA 72 bp GCCTGTGCCATGCCCTGTTCCCCAGGCCCGGTCACTTaGAGGGAGCTGAAGAGCCTGTCATCACCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: ACAMPCSPGPVT*RELKSLSSPVH
Trigger: GTGGACTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGGGAACAGGGCATGGCACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
CDS GCA 72 bp TCAGGGGCTGCCGGCAACCCTGGTGTTCCTGGTGGCTaGATCACCCCCATCTCTGGCTCTGTCTTCACGTGG +
Preference number: 6 (lower is better)
Translates to: SGAAGNPGVPGG*ITPISGSVFTW
Trigger: CCACGTGAAGACAGAGCCAGAGATGGGGGTGATGCAGCCACCAGGAACACCAGGGTTGCCGGCAGCCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp TCAAGAGCAGCAGCCTCGGACCAGAGCAATGCCCACTaGACCCCAGCGCCAAGGTCAGGCCTCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SRAAASDQSNAH*TPAPRSGLFSS
Trigger: GGAGGAGAAGAGGCCTGACCTTGGCGCTGGGGTCCAGTGGGCATTGCTCTGGTCCGAGGCTGCTGCTCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409822.1
ENST00000411462.5
ENST00000416106.1
ENST00000487008.1
CDS CAA 90 bp CACCACCTCCATCTGTGCCATGCCCTGTTCCCCAGGCCCGGTCACTaGCAGGGAGCTGAAGAGCCTGTCATCACCAGTCCACAGCGTTGC +
Preference number: 6 (lower is better)
Translates to: HHLHLCHALFPRPGH*QGAEEPVITSPQRC
Trigger: GCAACGCTGTGGACTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGGGAACAGGGCATGGCACAGATGGAGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409576.1
CDS GCA 72 bp GAGAATCCATTCCAGGCCTCCTCCAGCTTCAGGGGCTaGCGGCAACCCTGGTGTTCCTGGTGGCTGCATCAC +
Preference number: 6 (lower is better)
Translates to: ENPFQASSSFRG*RQPWCSWWLHH
Trigger: GTGATGCAGCCACCAGGAACACCAGGGTTGCCGGCAGCCCCTGAAGCTGGAGGAGGCCTGGAATGGATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 72 bp ACAGAATCCAACTGGCCATGGGCGCACCTGCAGGGCTaGTCCGTTCCTCTGAGGAGGGCACGTTCCTGTCCT +
Preference number: 6 (lower is better)
Translates to: TESNWPWAHLQG*SVPLRRARSCP
Trigger: AGGACAGGAACGTGCCCTCCTCAGAGGAACGGAGCAGCCCTGCAGGTGCGCCCATGGCCAGTTGGATTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp TTACTCAGAGGACGAGGTTGCCACATGCGGCTCAGGTaGGACCACGGCAAGCCGCAGGCACAGCAATGGGCT +
Preference number: 6 (lower is better)
Translates to: LLRGRGCHMRLR*DHGKPQAQQWA
Trigger: AGCCCATTGCTGTGCCTGCGGCTTGCCGTGGTCCCACCTGAGCCGCATGTGGCAACCTCGTCCTCTGAGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp CTGCTCCGTTCCTCTGAGGAGGGCACGTTCCTGTCCTaGGTGACCTGTGCGGCCAGGCAGAAAACTGCTAGG +
Preference number: 6 (lower is better)
Translates to: LLRSSEEGTFLS*VTCAARQKTAR
Trigger: CCTAGCAGTTTTCTGCCTGGCCGCACAGGTCACCCAGGACAGGAACGTGCCCTCCTCAGAGGAACGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 72 bp TGCCTGTGCCATGCCCTGTTCCCCAGGCCCGGTCACTaGCAGGGAGCTGAAGAGCCTGTCATCACCAGTCCA +
Preference number: 6 (lower is better)
Translates to: CLCHALFPRPGH*QGAEEPVITSP
Trigger: TGGACTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGGGAACAGGGCATGGCACAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
CDS TCA 72 bp TCCGTTCCTCTGAGGAGGGCACGTTCCTGTCCTGGGTaGCCTGTGCGGCCAGGCAGAAAACTGCTAGGACAC +
Preference number: 6 (lower is better)
Translates to: SVPLRRARSCPG*PVRPGRKLLGH
Trigger: GTGTCCTAGCAGTTTTCTGCCTGGCCGCACAGGTCACCCAGGACAGGAACGTGCCCTCCTCAGAGGAACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 72 bp CTCCGCTTTCTCCTCTCTCTGGTCCAGGGGAAGGTTTaGTTCCCTCCACAGGCAGGACAGGACAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: LRFLLSLVQGKV*FPPQAGQDRRS
Trigger: GCTCCTCCTGTCCTGTCCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGACCAGAGAGAGGAGAAAGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000409822.1
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
ENST00000487008.1
CDS GCA 72 bp ATCTGTGCCATGCCCTGTTCCCCAGGCCCGGTCACTTaGAGGGAGCTGAAGAGCCTGTCATCACCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: ICAMPCSPGPVT*RELKSLSSPVH
Trigger: GTGGACTGGTGATGACAGGCTCTTCAGCTCCCTGCAAGTGACCGGGCCTGGGGAACAGGGCATGGCACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409576.1
CDS CAA 90 bp AGGGACAGCTGGCCATGCATCTCCCACGCCCGCATGGCCAGGAGGTaGAGCAAACAGTTCTTCTGGGAGATGGAGCCTTCCACATCGAGC +
Preference number: 6 (lower is better)
Translates to: RDSWPCISHARMARR*SKQFFWEMEPSTSS
Trigger: GCTCGATGTGGAAGGCTCCATCTCCCAGAAGAACTGTTTGCTCAACCTCCTGGCCATGCGGGCGTGGGAGATGCATGGCCAGCTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 72 bp GACCTCAAAGCAGGTGACCCGGGAGCACCTGCGCGCTaGCGGAAGTCAAGTCACATTCCAGTCCTGCATTTC +
Preference number: 6 (lower is better)
Translates to: DLKAGDPGAPAR*RKSSHIPVLHF
Trigger: GAAATGCAGGACTGGAATGTGACTTGACTTCCGGCAGCGCGCAGGTGCTCCCGGGTCACCTGCTTTGAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000487008.1
CDS GCA 72 bp TGCCGTGAAAGGGATCTCCACTTACTGGGAGTCCGATaGATCCCTGCCAGCTTCCAGCGATGCAGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: CRERDLHLLGVR*IPASFQRCSWA
Trigger: AGCCCAGCTGCATCGCTGGAAGCTGGCAGGGATGCATCGGACTCCCAGTAAGTGGAGATCCCTTTCACGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 72 bp CGTGGAGCCCGCACTCCTCCACGTTTCGTGTCCAAGTaGTGTTTCTTGGCACTCCTGAGCAGCCAGGACCAG +
Preference number: 6 (lower is better)
Translates to: RGARTPPRFVSK*CFLALLSSQDQ
Trigger: CTGGTCCTGGCTGCTCAGGAGTGCCAAGAAACACAACTTGGACACGAAACGTGGAGGAGTGCGGGCTCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466244.1
CDS CAA 90 bp TGCTACCTGTCTCCGCTTTCTCCTCTCTCTGGTCCAGGGGAAGGTTaGCTTCCCTCCACAGGCAGGACAGGACAGGAGGAGCCTCTACTC +
Preference number: 6 (lower is better)
Translates to: CYLSPLSPLSGPGEG*LPSTGRTGQEEPLL
Trigger: GAGTAGAGGCTCCTCCTGTCCTGTCCTGCCTGTGGAGGGAAGCAAACCTTCCCCTGGACCAGAGAGAGGAGAAAGCGGAGACAGGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000409822.1
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
ENST00000487008.1
CDS CAA 90 bp GCAGCACCAGGAACTACTGAGTGGCAGATGGCAACGGCATGTTCTTaGTGGACCACGGAGGAGCAGAACCCCACTGTGGAGGAGGATGGG +
Preference number: 6 (lower is better)
Translates to: AAPGTTEWQMATACS*WTTEEQNPTVEEDG
Trigger: CCCATCCTCCTCCACAGTGGGGTTCTGCTCCTCCGTGGTCCACAAAGAACATGCCGTTGCCATCTGCCACTCAGTAGTTCCTGGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp CCAGAAGGTTTCAGGGCAAAGTCCACAGTGGTCATGTaGTCACCTGAGGCAGGGCAGGAGGCTGGACCTCAA +
Preference number: 6 (lower is better)
Translates to: PEGFRAKSTVVM*SPEAGQEAGPQ
Trigger: TTGAGGTCCAGCCTCCTGCCCTGCCTCAGGTGACCACATGACCACTGTGGACTTTGCCCTGAAACCTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000487008.1
CDS GCA 72 bp GGAGCTGAAGAGCCTGTCATCACCAGTCCACAGCGTTaGTACCTGTCTCCGCTTTCTCCTCTCTCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: GAEEPVITSPQR*YLSPLSPLSGP
Trigger: TGGACCAGAGAGAGGAGAAAGCGGAGACAGGTAGCAACGCTGTGGACTGGTGATGACAGGCTCTTCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264601.8
ENST00000392001.6
ENST00000409576.1
ENST00000409822.1
ENST00000411462.5
ENST00000414278.1
ENST00000416106.1
CDS GCA 72 bp CTGCGCGCTGCCGGAAGTCAAGTCACATTCCAGTCCTaGATTTCCTGGCACCCAACTGGAGCCCGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: LRAAGSQVTFQS*ISWHPTGARFS
Trigger: TGAAAAACGGGCTCCAGTTGGGTGCCAGGAAATGCAGGACTGGAATGTGACTTGACTTCCGGCAGCGCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392001.6
ENST00000487008.1
CDS GCA 72 bp ACCTGGTTCACTTCCAACAGTAAGATCCGAGAAAGCTaGAGCCGTGGAGCCCGCACTCCTCCACGTTTCGTG +
Preference number: 6 (lower is better)
Translates to: TWFTSNSKIRES*SRGARTPPRFV
Trigger: CACGAAACGTGGAGGAGTGCGGGCTCCACGGCTGCAGCTTTCTCGGATCTTACTGTTGGAAGTGAACCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466244.1
CDS CCA 72 bp CACCACCTTTGTGAAGAACGCACCGAAGAGCCAAGCTaGACTTACCCACGGAGCCACTTCCCAGGAGAACCA +
Preference number: 6 (lower is better)
Translates to: HHLCEERTEEPS*TYPRSHFPGEP
Trigger: TGGTTCTCCTGGGAAGTGGCTCCGTGGGTAAGTCCAGCTTGGCTCTTCGGTGCGTTCTTCACAAAGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414278.1
CDS CCA 72 bp ACTACTGAGTGGCAGATGGCAACGGCATGTTCTTTGTaGACCACGGAGGAGCAGAACCCCACTGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: TTEWQMATACSL*TTEEQNPTVEE
Trigger: CTCCTCCACAGTGGGGTTCTGCTCCTCCGTGGTCCACAAAGAACATGCCGTTGCCATCTGCCACTCAGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp TCAAAGGACCACTTTGTGCAAGAGAGTCTGGGGGACTaGCCACCACCCCAAACCCTGACCCTAATGCAGCAC +
Preference number: 6 (lower is better)
Translates to: SKDHFVQESLGD*PPPQTLTLMQH
Trigger: GTGCTGCATTAGGGTCAGGGTTTGGGGTGGTGGCCAGTCCCCCAGACTCTCTTGCACAAAGTGGTCCTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 72 bp GGAACTACTGAGTGGCAGATGGCAACGGCATGTTCTTaGTGGACCACGGAGGAGCAGAACCCCACTGTGGAG +
Preference number: 6 (lower is better)
Translates to: GTTEWQMATACS*WTTEEQNPTVE
Trigger: CTCCACAGTGGGGTTCTGCTCCTCCGTGGTCCACAAAGAACATGCCGTTGCCATCTGCCACTCAGTAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS TCA 72 bp ACTGATGCGTTGGCTGGGTTGGTTCCTTCCGGAGACTaGAGGAGAATCCATTCCAGGCCTCCTCCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: TDALAGLVPSGD*RRIHSRPPPAS
Trigger: TGAAGCTGGAGGAGGCCTGGAATGGATTCTCCTTCAGTCTCCGGAAGGAACCAACCCAGCCAACGCATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS TCA 72 bp TTCTTCCTGCAGTTCTGGAGGCCAGAGGTCCAAAACTaGTGCGTTGGCTGGGTTGGTTCCTTCCGGAGACTG +
Preference number: 6 (lower is better)
Translates to: FFLQFWRPEVQN*CVGWVGSFRRL
Trigger: CAGTCTCCGGAAGGAACCAACCCAGCCAACGCATCAGTTTTGGACCTCTGGCCTCCAGAACTGCAGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 72 bp CTAGTGTGTGTGGGGTCTCCCCATCAGCCACTTGTCTaGAGCTGTTTACACGGTCTTCGTCCTGGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: LVCVGSPHQPLV*SCLHGLRPGRS
Trigger: TGACCTTCCAGGACGAAGACCGTGTAAACAGCTGCAGACAAGTGGCTGATGGGGAGACCCCACACACACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430445.1
CDS CCA 72 bp GCAGTTCTGGAGGCCAGAGGTCCAAAACTGATGCGTTaGCTGGGTTGGTTCCTTCCGGAGACTGAAGGAGAA +
Preference number: 6 (lower is better)
Translates to: AVLEARGPKLMR*LGWFLPETEGE
Trigger: TTCTCCTTCAGTCTCCGGAAGGAACCAACCCAGCCAACGCATCAGTTTTGGACCTCTGGCCTCCAGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp TGGGCTACATATGCCGTGAAAGGGATCTCCACTTACTaGGAGTCCGATGCATCCCTGCCAGCTTCCAGCGAT +
Preference number: 6 (lower is better)
Translates to: WATYAVKGISTY*ESDASLPASSD
Trigger: ATCGCTGGAAGCTGGCAGGGATGCATCGGACTCCCAGTAAGTGGAGATCCCTTTCACGGCATATGTAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp GCCCGCATGGCCAGGAGGTTGAGCAAACAGTTCTTCTaGGAGATGGAGCCTTCCACATCGAGCAAAGTGTTG +
Preference number: 6 (lower is better)
Translates to: ARMARRLSKQFF*EMEPSTSSKVL
Trigger: CAACACTTTGCTCGATGTGGAAGGCTCCATCTCCCAGAAGAACTGTTTGCTCAACCTCCTGGCCATGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp ACCCTAATGCAGCACCAGGAACTACTGAGTGGCAGATaGCAACGGCATGTTCTTTGTGGACCACGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: TLMQHQELLSGR*QRHVLCGPRRS
Trigger: GCTCCTCCGTGGTCCACAAAGAACATGCCGTTGCCATCTGCCACTCAGTAGTTCCTGGTGCTGCATTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 90 bp AGTCCAGGCAGGAAGGAAGATGAGCCCACCGTAGGCAGGATACTCTaGAAGTCGTTCTTCACGTACCGAAGAGCCAAGCTGGACTTACCC +
Preference number: 6 (lower is better)
Translates to: SPGRKEDEPTVGRIL*KSFFTYRRAKLDLP
Trigger: GGGTAAGTCCAGCTTGGCTCTTCGGTACGTGAAGAACGACTTCAAGAGTATCCTGCCTACGGTGGGCTCATCTTCCTTCCTGCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416106.1
CDS TCA 72 bp TCCTCTTGTTCACCTAGAAAACTCTTAGGCATCCTCTaGGATCTTCCAGCGGCAACCCCGGAAGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SSCSPRKLLGIL*DLPAATPEGLL
Trigger: CAGCAGCCCTTCCGGGGTTGCCGCTGGAAGATCTCAGAGGATGCCTAAGAGTTTTCTAGGTGAACAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 72 bp GGAGCCTTCCACATCGAGCAAAGTGTTGGGAGTGATTaGTATGGGGCCTTTGGAGAGGCTTTGGATGGGAAG +
Preference number: 6 (lower is better)
Translates to: GAFHIEQSVGSD*YGAFGEALDGK
Trigger: CTTCCCATCCAAAGCCTCTCCAAAGGCCCCATAGCAATCACTCCCAACACTTTGCTCGATGTGGAAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp GAGGCCAGAGGTCCAAAACTGATGCGTTGGCTGGGTTaGTTCCTTCCGGAGACTGAAGGAGAATCCATTCCA +
Preference number: 6 (lower is better)
Translates to: EARGPKLMRWLG*FLPETEGESIP
Trigger: TGGAATGGATTCTCCTTCAGTCTCCGGAAGGAACCAACCCAGCCAACGCATCAGTTTTGGACCTCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp AACCCTGACCCTAATGCAGCACCAGGAACTACTGAGTaGCAGATGGCAACGGCATGTTCTTTGTGGACCACG +
Preference number: 6 (lower is better)
Translates to: NPDPNAAPGTTE*QMATACSLWTT
Trigger: CGTGGTCCACAAAGAACATGCCGTTGCCATCTGCCACTCAGTAGTTCCTGGTGCTGCATTAGGGTCAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 72 bp GTGAAGAACGCACAGCCCACCGTAGGCAGGATACTCTaGAAGTCGTTCTTCACGTACCGAAGAGCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: VKNAQPTVGRIL*KSFFTYRRAKL
Trigger: CAGCTTGGCTCTTCGGTACGTGAAGAACGACTTCAAGAGTATCCTGCCTACGGTGGGCTGTGCGTTCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264601.8
CDS CAA 90 bp ACCACCTTTGTGAAGAACGCACAGCCCACCGTAGGCAGGATACTCTaGAAGTCGTTCTTCACGTACCGAAGAGCCAAGCTGGACTTACCC +
Preference number: 6 (lower is better)
Translates to: TTFVKNAQPTVGRIL*KSFFTYRRAKLDLP
Trigger: GGGTAAGTCCAGCTTGGCTCTTCGGTACGTGAAGAACGACTTCAAGAGTATCCTGCCTACGGTGGGCTGTGCGTTCTTCACAAAGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264601.8
CDS CAA 90 bp AGGCTCCTGTCAAAGCTGCTACCCTGCCTAGACCCTGGATTGGGTTaGGGGTCTGTTGGGGAGATTCTGGCAAATGGAGCCACATGTTTA +
Preference number: 6 (lower is better)
Translates to: RLLSKLLPCLDPGLG*GSVGEILANGATCL
Trigger: TAAACATGTGGCTCCATTTGCCAGAATCTCCCCAACAGACCCCAAACCCAATCCAGGGTCTAGGCAGGGTAGCAGCTTTGACAGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 90 bp GTCATTAGCTATTCCGGGAGGGGGAAGCCAGTGTTGCTGATCACGTaGTGTAAAATGTCACAGAATCCAACTGGCCATGGGCGCACCTGC +
Preference number: 6 (lower is better)
Translates to: VISYSGRGKPVLLIT*CKMSQNPTGHGRTC
Trigger: GCAGGTGCGCCCATGGCCAGTTGGATTCTGTGACATTTTACACAACGTGATCAGCAACACTGGCTTCCCCCTCCCGGAATAGCTAATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS TCA 72 bp AGATGGAGCCTTCCACATCGAGCAAAGTGTTGGGAGTaGTTGCTATGGGGCCTTTGGAGAGGCTTTGGATGG +
Preference number: 6 (lower is better)
Translates to: RWSLPHRAKCWE*LLWGLWRGFGW
Trigger: CCATCCAAAGCCTCTCCAAAGGCCCCATAGCAATCACTCCCAACACTTTGCTCGATGTGGAAGGCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 72 bp AGGAAGGAAGATGAGCCCACCGTAGGCAGGATACTCTaGAAGTCGTTCTTCACGTACCGAAGAGCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: RKEDEPTVGRIL*KSFFTYRRAKL
Trigger: CAGCTTGGCTCTTCGGTACGTGAAGAACGACTTCAAGAGTATCCTGCCTACGGTGGGCTCATCTTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416106.1
CDS CAA 72 bp TATTCCGGGAGGGGGAAGCCAGTGTTGCTGATCACGTaGTGTAAAATGTCACAGAATCCAACTGGCCATGGG +
Preference number: 6 (lower is better)
Translates to: YSGRGKPVLLIT*CKMSQNPTGHG
Trigger: CCCATGGCCAGTTGGATTCTGTGACATTTTACACAACGTGATCAGCAACACTGGCTTCCCCCTCCCGGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS GCA 72 bp TCTCCAGGACCTAATACAAAAGCTCTGGGCTACATATaGCGTGAAAGGGATCTCCACTTACTGGGAGTCCGA +
Preference number: 6 (lower is better)
Translates to: SPGPNTKALGYI*RERDLHLLGVR
Trigger: TCGGACTCCCAGTAAGTGGAGATCCCTTTCACGGCATATGTAGCCCAGAGCTTTTGTATTAGGTCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS TCA 72 bp CTTTGCAGTCACTGTCAATCGTCATCGTTTAATGAGTaGGCATTTCAGAGGCCCTTCAGTCTGCACGGGACT +
Preference number: 6 (lower is better)
Translates to: LCSHCQSSSFNE*AFQRPFSLHGT
Trigger: AGTCCCGTGCAGACTGAAGGGCCTCTGAAATGCTCACTCATTAAACGATGACGATTGACAGTGACTGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487008.1
CDS CAA 72 bp GTGGTCATTAGCTATTCCGGGAGGGGGAAGCCAGTGTaGCTGATCACGTTGTGTAAAATGTCACAGAATCCA +
Preference number: 6 (lower is better)
Translates to: VVISYSGRGKPV*LITLCKMSQNP
Trigger: TGGATTCTGTGACATTTTACACAACGTGATCAGCAACACTGGCTTCCCCCTCCCGGAATAGCTAATGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 90 bp CGGGGTTTCACTTCCAGGATCTCACTTTGGCACAGAATGTTTTTCTaGGCTCCTTCCTTGGAGCTGTATGGAATCTTTGTTGCACTTTGC +
Preference number: 6 (lower is better)
Translates to: RGFTSRISLWHRMFF*APSLELYGIFVALC
Trigger: GCAAAGTGCAACAAAGATTCCATACAGCTCCAAGGAAGGAGCCAAGAAAAACATTCTGTGCCAAAGTGAGATCCTGGAAGTGAAACCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487008.1
CDS TCA 72 bp TCATTAGCTATTCCGGGAGGGGGAAGCCAGTGTTGCTaGTCACGTTGTGTAAAATGTCACAGAATCCAACTG +
Preference number: 6 (lower is better)
Translates to: SLAIPGGGSQCC*SRCVKCHRIQL
Trigger: CAGTTGGATTCTGTGACATTTTACACAACGTGATCAGCAACACTGGCTTCCCCCTCCCGGAATAGCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CCA 72 bp CCAGCGCTGTTTATAAGAGAGTTTCCTAAGGACACCTaGTTCACTTCCAACAGTAAGATCCGAGAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: PALFIREFPKDT*FTSNSKIRESC
Trigger: GCAGCTTTCTCGGATCTTACTGTTGGAAGTGAACCAGGTGTCCTTAGGAAACTCTCTTATAAACAGCGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466244.1
CDS CAA 90 bp CGGGGTTTCACTTCCAGGATCTCACTTTGGCACAGAATGTTTTTCTaGGCTCCTTCCTTGGAGCTGTATGGAATCTTTGTTGCACTTGAA +
Preference number: 6 (lower is better)
Translates to: RGFTSRISLWHRMFF*APSLELYGIFVALE
Trigger: TTCAAGTGCAACAAAGATTCCATACAGCTCCAAGGAAGGAGCCAAGAAAAACATTCTGTGCCAAAGTGAGATCCTGGAAGTGAAACCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS TCA 72 bp CAACAGCCCAGAAGAGAAAAGAATATTCCGGTCAGATaGATTAATTCCTCCCACTGTCAGCTAGAAGCCATC +
Preference number: 6 (lower is better)
Translates to: QQPRREKNIPVR*INSSHCQLEAI
Trigger: GATGGCTTCTAGCTGACAGTGGGAGGAATTAATTCATCTGACCGGAATATTCTTTTCTCTTCTGGGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392001.6
CDS CCA 72 bp GAAGATAAATCTCTCCAGGACCTAATACAAAAGCTCTaGGCTACATATGCCGTGAAAGGGATCTCCACTTAC +
Preference number: 6 (lower is better)
Translates to: EDKSLQDLIQKL*ATYAVKGISTY
Trigger: GTAAGTGGAGATCCCTTTCACGGCATATGTAGCCCAGAGCTTTTGTATTAGGTCCTGGAGAGATTTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477149.5
CDS CAA 72 bp TTTTCTTGGCTCCTTCCTTGGAGCTGTATGGAATCTTaGTTGCACTTGAAAAACCAACAGCCCAGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: FSWLLPWSCMES*LHLKNQQPRRE
Trigger: TTCTCTTCTGGGCTGTTGGTTTTTCAAGTGCAACAAAGATTCCATACAGCTCCAAGGAAGGAGCCAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392001.6