RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB11FIP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000135631

Ensembl transcript IDs: ENST00000258098.6, ENST00000475951.1, ENST00000479196.1, ENST00000482554.5, ENST00000486777.7, ENST00000493523.2

Found 582 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAACAGCCCACAGCAGTGCTGTCCATTCCCATTCCCAGGGCCCTaGGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCC +
Preference number: 1 (lower is better)
Translates to: GNSPQQCCPFPFPGP*ESHPYVFNRWEGDA
Trigger: GGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCCCTGGGAATGGGAATGGACAGCACTGCTGTGGGCTGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 90 bp GTTACAGGGGCTTTCCTCCATGTGTGGCGCTCCTCTGCTCCATCCTaGCAGCAGACAGACATCACCCAGAGGGCACGTGTCTGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: VTGAFLHVWRSSAPS*QQTDITQRARVCLR
Trigger: CCTCAGGCAGACACGTGCCCTCTGGGTGATGTCTGTCTGCTGCCAGGATGGAGCAGAGGAGCGCCACACATGGAGGAAAGCCCCTGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR GCA 90 bp AGACTCAGGACATGGCAGAGACTGGCCCAGACCACACAGGCTTCTTaGTCTCAGGGGAATGGGTGTGAGGCTGAAGAGGCTGGTTGCCCG +
Preference number: 1 (lower is better)
Translates to: RLRTWQRLAQTTQAS*SQGNGCEAEEAGCP
Trigger: CGGGCAACCAGCCTCTTCAGCCTCACACCCATTCCCCTGAGAGCAAGAAGCCTGTGTGGTCTGGGCCAGTCTCTGCCATGTCCTGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR TCA 90 bp GAAAGACCCAGGGCTCCCAAAGACACACAAGTTGTGCACAGAACCTaGTGCCTCCAAAGGGAATCCAGAGGGCCCCCTTCCAGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: ERPRAPKDTQVVHRT*CLQRESRGPPSSSP
Trigger: GGGGCTGCTGGAAGGGGGCCCTCTGGATTCCCTTTGGAGGCATCAGGTTCTGTGCACAACTTGTGTGTCTTTGGGAGCCCTGGGTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 90 bp TCAGGGAGCAGCCTGAAGCACACACATCATCCACCACTGTCCACATaGCACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGA +
Preference number: 1 (lower is better)
Translates to: SGSSLKHTHHPPLST*HSPHKQLQTEADSG
Trigger: TCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTGCCATGTGGACAGTGGTGGATGATGTGTGTGCTTCAGGCTGCTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 90 bp CTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTaGTGGTCCCAGAGGAGCTCTTGCCTCCTCACTAAGCTGTTAAGT +
Preference number: 1 (lower is better)
Translates to: LRPSKSKPTGPLLKK*WSQRSSCLLTKLLS
Trigger: ACTTAACAGCTTAGTGAGGAGGCAAGAGCTCCTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 90 bp GTGGAGTTTAAGGTAGGTAACGTTACAGGGGCTTTCCTCCATGTGTaGCGCTCCTCTGCTCCATCCTGGCAGCAGACAGACATCACCCAG +
Preference number: 1 (lower is better)
Translates to: VEFKVGNVTGAFLHV*RSSAPSWQQTDITQ
Trigger: CTGGGTGATGTCTGTCTGCTGCCAGGATGGAGCAGAGGAGCGCCACACATGGAGGAAAGCCCCTGTAACGTTACCTACCTTAAACTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 90 bp AGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTaGTCCCAGAGGAGCTCTTGCCTCCTCACTAAGCTGTTAAGTATC +
Preference number: 1 (lower is better)
Translates to: RPSKSKPTGPLLKKW*SQRSSCLLTKLLSI
Trigger: GATACTTAACAGCTTAGTGAGGAGGCAAGAGCTCCTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR GCA 90 bp ACAAACAGCAAAGCAGAACCATGCCTGCTCCCTGCCCAACCCACCTaGAACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAG +
Preference number: 1 (lower is better)
Translates to: TNSKAEPCLLPAQPT*NFPPSVARRRNINK
Trigger: CTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTTGCAGGTGGGTTGGGCAGGGAGCAGGCATGGTTCTGCTTTGCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR GCA 90 bp GGGATAATAAAGTATGTGCTAGCAACCAGTCTTGTCCCAGATTACTaGATCAAGCTACAGTTCACCCCTGCTCTGTCTTGGGGGAAGAGT +
Preference number: 1 (lower is better)
Translates to: GIIKYVLATSLVPDY*IKLQFTPALSWGKS
Trigger: ACTCTTCCCCCAAGACAGAGCAGGGGTGAACTGTAGCTTGATGCAGTAATCTGGGACAAGACTGGTTGCTAGCACATACTTTATTATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGCTCCGCACCCGCCCCTaGGCCCCACACATTCCCATG +
Preference number: 2 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVLRTRP*APHIPM
Trigger: CATGGGAATGTGTGGGGCGCAGGGGCGGGTGCGGAG...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACACATCCAGGGGCTCTTaGCCCCGCCCACCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHTSRGS*PRPPKA
Trigger: TGCCTTTGGTGGGCGGGGTCAAGAGCCCCTGGATGT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCGAAAAGCAAAAAGGTaGTCTCTCCGCACCCGCCCC +
Preference number: 2 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHRKAKR*SLRTRP
Trigger: GGGGCGGGTGCGGAGAGAGCACCTTTTTGCTTTTCG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCAGCCCCAGGCCTGCCTaGCCGCCTGCCCAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: GQRTDTSFQSALQPSQASSPRPA*PPAQQC
Trigger: ACACTGCTGGGCAGGCGGGCAGGCAGGCCTGGGGCT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACAGCAGACTCAGGACATaGCAGAGACTGGCCCAGACC +
Preference number: 2 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHSRLRT*QRLAQT
Trigger: GGTCTGGGCCAGTCTCTGCCATGTCCTGAGTCTGCT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGAGACAGCAGGAAGGTTaGGGGAGCAGCAACTTGGCC +
Preference number: 2 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPERQQEG*GSSNLA
Trigger: GGCCAAGTTGCTGCTCCCTCAACCTTCCTGCTGTCT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGCAGGGTGCCCCAAGCTaGCAAAGTTCCCTGCAGATG +
Preference number: 2 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVQGAPS*QSSLQM
Trigger: CATCTGCAGGGAACTTTGGCAGCTTGGGGCACCCTG...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCCACCACTGTCCACATaGCACTCGCCCCACAAACAG +
Preference number: 2 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEPPLST*HSPHKQ
Trigger: CTGTTTGTGGGGCGAGTGCCATGTGGACAGTGGTGG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTACATCCAGGGGCTCTTaGCCCCGCCCACCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: KNSSEAIHALGIREAHKGTSRGS*PRPPKA
Trigger: TGCCTTTGGTGGGCGGGGTCAAGAGCCCCTGGATGT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACAGGCAAGACAGACGATaGCCCACTGCAGATGAGAGA +
Preference number: 2 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHRQDRR*PTADER
Trigger: TCTCTCATCTGCAGTGGGGCATCGTCTGTCTTGCCT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGAGCCCCTCCAGGGACTaGAGGGAAATGAAGGGGATG +
Preference number: 2 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGSPSRD*REMKGM
Trigger: CATCCCCTTCATTTCCCTCCAGTCCCTGGAGGGGCT...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACATGCCCCACTGCAGATaGGAGAGTTCAGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDMPHCR*ESSGGE
Trigger: CTCTCCTCCTGAACTCTCTCATCTGCAGTGGGGCAT...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAATGCCCCACTGCAGATaGGAGAGTTCAGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEMPHCR*ESSGGE
Trigger: CTCTCCTCCTGAACTCTCTCATCTGCAGTGGGGCAT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTTGTGCACAGAACCTaGTGCCTCCAAAGGGAATCC +
Preference number: 2 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVVVHRT*CLQRES
Trigger: GGATTCCCTTTGGAGGCATCAGGTTCTGTGCACAAC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTCCACAGGCCCTCTCCTaGAGAAGTGGTGGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: KNSSEAIHALGIREAHKGPQALS*RSGGPR
Trigger: TCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGG...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGCCTGCCTGCCCGCCTaGCCAGCAGTGTTTATCCTG +
Preference number: 2 (lower is better)
Translates to: GQRTDTSFQSALQPSQASACLPA*PAVFIL
Trigger: CAGGATAAACACTGCTGGGCAGGCGGGCAGGCAGGC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCATTTCAAAGTGCACTaGAGCCAAGCCAGGCAAGCC +
Preference number: 2 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEHFKVH*SQARQA
Trigger: GGCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGACCCCTGCTCTGTCTTaGGGGAAGAGTTCCAATTCC +
Preference number: 2 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVTPALS*GKSSNS
Trigger: GGAATTGGAACTCTTCCCCCAAGACAGAGCAGGGGT...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAAGGCAAGACAGACGATaGCCCACTGCAGATGAGAGA +
Preference number: 2 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEERQDRR*PTADER
Trigger: TCTCTCATCTGCAGTGGGGCATCGTCTGTCTTGCCT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACTCCGCACCCGCCCCTaGGCCCCACACATTCCCATG +
Preference number: 2 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKALRTRP*APHIPM
Trigger: CATGGGAATGTGTGGGGCGCAGGGGCGGGTGCGGAG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTGCTGCCAAAGTTCCCTaGAGATGCCTTGGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: KNSSEAIHALGIREAHKGAAKVP*RCLGEA
Trigger: GGCTTCCCCAAGGCATCTGCAGGGAACTTTGGCAGC...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTCAGGGTGCCCCAAGCTaGCAAAGTTCCCTGCAGATG +
Preference number: 2 (lower is better)
Translates to: KNSSEAIHALGIREAHKGQGAPS*QSSLQM
Trigger: CATCTGCAGGGAACTTTGGCAGCTTGGGGCACCCTG...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTAGCCCCTCCAGGGACTaGAGGGAAATGAAGGGGATG +
Preference number: 2 (lower is better)
Translates to: KNSSEAIHALGIREAHKGSPSRD*REMKGM
Trigger: CATCCCCTTCATTTCCCTCCAGTCCCTGGAGGGGCT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGATGAAAACAGGCAGGTaGGAAAGACCCAGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMMKTGR*ERPRAP
Trigger: GGGAGCCCTGGGTCTTTCCCACCTGCCTGTTTTCAT...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAAAGCAAACCAGGGGCTaGGCCAAAGGACAGATACTT +
Preference number: 2 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEKQTRG*AKGQIL
Trigger: AAGTATCTGTCCTTTGGCCCAGCCCCTGGTTTGCTT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAAAGACACACAAGTTGTaGACAGAACCTGATGCCTCC +
Preference number: 2 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEKTHKL*TEPDAS
Trigger: GGAGGCATCAGGTTCTGTGCACAACTTGTGTGTCTT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACAAGACACACAAGTTGTaGACAGAACCTGATGCCTCC +
Preference number: 2 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDKTHKL*TEPDAS
Trigger: GGAGGCATCAGGTTCTGTGCACAACTTGTGTGTCTT...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAGCCTGCCTGCCCGCCTaGCCAGCAGTGTTTATCCTG +
Preference number: 2 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAACLPA*PAVFIL
Trigger: CAGGATAAACACTGCTGGGCAGGCGGGCAGGCAGGC...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATTTGCTAATTCAGGGTaGCCCAAGCTGCCAAAGTTC +
Preference number: 2 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEFANSG*PKLPKF
Trigger: GAACTTTGGCAGCTTGGGGCACCCTGAATTAGCAAA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTTATGTATTCAACAGGTaGGAGGGGGACGCCACACAG +
Preference number: 2 (lower is better)
Translates to: KNSSEAIHALGIREAHKGYVFNR*EGDATQ
Trigger: CTGTGTGGCGTCCCCCTCCCACCTGTTGAATACATA...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGTTGTGCACAGAACCTaGTGCCTCCAAAGGGAATCC +
Preference number: 2 (lower is better)
Translates to: GQRTDTSFQSALQPSQASVVHRT*CLQRES
Trigger: GGATTCCCTTTGGAGGCATCAGGTTCTGTGCACAAC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGGTGGGAAGAAATGGCTaGCCATCCTTGGGGGATAAT +
Preference number: 2 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMVGRNG*PSLGDN
Trigger: ATTATCCCCCAAGGATGGTCAGCCATTTCTTCCCAC...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCAAAAGTTCAAACCCTaGAGCAACACAGAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEQKFKP*SNTEFW
Trigger: CCAAAACTCTGTGTTGCTGCAGGGTTTGAACTTTTG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTAAAGTTCCCTGCAGATaGCTTGGGGAAGCCTACCAT +
Preference number: 2 (lower is better)
Translates to: KNSSEAIHALGIREAHKGKVPCR*LGEAYH
Trigger: ATGGTAGGCTTCCCCAAGGCATCTGCAGGGAACTTT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTTCCCAGAGGAGCTCTTaGCTCCTCACTAAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: KNSSEAIHALGIREAHKGSQRSS*LLTKLL
Trigger: TAACAGCTTAGTGAGGAGGCAAGAGCTCCTCTGGGA...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCACCCCTGCTCTGTCTTaGGGGAAGAGTTCCAATTCC +
Preference number: 2 (lower is better)
Translates to: GQRTDTSFQSALQPSQASTPALS*GKSSNS
Trigger: GGAATTGGAACTCTTCCCCCAAGACAGAGCAGGGGT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCAGCAGACTCAGGACATaGCAGAGACTGGCCCAGACC +
Preference number: 2 (lower is better)
Translates to: SSCLLTKLLSILLQHLITSRLRT*QRLAQT
Trigger: GGTCTGGGCCAGTCTCTGCCATGTCCTGAGTCTGCT...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACCATTCCCAGGGCCCTaGGAGAGCCATCCCTATGTA +
Preference number: 2 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAPFPGP*ESHPYV
Trigger: TACATAGGGATGGCTCTCTCAGGGCCCTGGGAATGG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACAAAAGTTCAAACCCTaGAGCAACACAGAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEQKFKP*SNTEFW
Trigger: CCAAAACTCTGTGTTGCTGCAGGGTTTGAACTTTTG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCCCACACATTCCCATGTaGCACTCGTGGAAAGGTCAG +
Preference number: 2 (lower is better)
Translates to: SSCLLTKLLSILLQHLITPHIPM*HSWKGQ
Trigger: CTGACCTTTCCACGAGTGTCACATGGGAATGTGTGG...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR TCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTCCACACATTCCCATGTaGCACTCGTGGAAAGGTCAG +
Preference number: 2 (lower is better)
Translates to: NFPPSVARRRNINKDPGLPHIPM*HSWKGQ
Trigger: CTGACCTTTCCACGAGTGTCACATGGGAATGTGTGG...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCTTGTCCCAGATTACTaGATCAAGCTACAGTTCACC +
Preference number: 2 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMLVPDY*IKLQFT
Trigger: GGTGAACTGTAGCTTGATGCAGTAATCTGGGACAAG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCGAGGGACCTACACATTaGAGGTGGTCAAGAGCTCGA +
Preference number: 2 (lower is better)
Translates to: SSCLLTKLLSILLQHLITEGPTH*RWSRAR
Trigger: TCGAGCTCTTGACCACCTCCAATGTGTAGGTCCCTC...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCGAAAAGCAAAAAGGTaGTCTCTCCGCACCCGCCCC +
Preference number: 2 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSRKAKR*SLRTRP
Trigger: GGGGCGGGTGCGGAGAGAGCACCTTTTTGCTTTTCG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAAACAGCCCACAGCAGTaGTGTCCATTCCCATTCCCA +
Preference number: 2 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKANSPQQ*CPFPFP
Trigger: TGGGAATGGGAATGGACAGCACTGCTGTGGGCTGTT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCCACCACTGTCCACATaGCACTCGCCCCACAAACAG +
Preference number: 2 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSPPLST*HSPHKQ
Trigger: CTGTTTGTGGGGCGAGTGCCATGTGGACAGTGGTGG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCTCCCAAGCCCCAGCCTaGAGGGACCTACACATTGGA +
Preference number: 2 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSSQAPA*RDLHIG
Trigger: TCCAATGTGTAGGTCCCTCCAGGCTGGGGCTTGGGA...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTCCAGGCAAGCTGACTaGTCTAGTATGGCTAAGTCC +
Preference number: 2 (lower is better)
Translates to: NFPPSVARRRNINKDPGLSRQAD*SSMAKS
Trigger: GGACTTAGCCATACTAGACCAGTCAGCTTGCCTGGA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTACTTCATTTCAAAGTaGACTGCAGCCAAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: NFPPSVARRRNINKDPGLYFISK*TAAKPG
Trigger: GCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCATGAAAACAGGCAGGTaGGAAAGACCCAGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSMKTGR*ERPRAP
Trigger: GGGAGCCCTGGGTCTTTCCCACCTGCCTGTTTTCAT...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCATGGCTGACCATCCTTaGGGGATAATAAAGTATGTG +
Preference number: 2 (lower is better)
Translates to: GQRTDTSFQSALQPSQASMADHP*GIIKYV
Trigger: CACATACTTTATTATCCCCCAAGGATGGTCAGCCAT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCAGAGTTTTGGCATCTaGACAGGCAACAAGAATAGA +
Preference number: 2 (lower is better)
Translates to: GQRTDTSFQSALQPSQASQSFGI*TGNKNR
Trigger: TCTATTCTTGTTGCCTGTCCAGATGCCAAAACTCTG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCCAGCAGTGTTTATCCTaGGATCCTCCTATTGGGGTT +
Preference number: 2 (lower is better)
Translates to: SSCLLTKLLSILLQHLITQQCLS*DPPIGV
Trigger: AACCCCAATAGGAGGATCCCAGGATAAACACTGCTG...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCATCCAGGCAAGCTGACTaGTCTAGTATGGCTAAGTCC +
Preference number: 2 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKASRQAD*SSMAKS
Trigger: GGACTTAGCCATACTAGACCAGTCAGCTTGCCTGGA...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACCTACACATTGGAGGTaGTCAAGAGCTCGAAAAGCA +
Preference number: 2 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAPTHWR*SRARKA
Trigger: TGCTTTTCGAGCTCTTGACCACCTCCAATGTGTAGG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCCTACACATTGGAGGTaGTCAAGAGCTCGAAAAGCA +
Preference number: 2 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSPTHWR*SRARKA
Trigger: TGCTTTTCGAGCTCTTGACCACCTCCAATGTGTAGG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAGAGTTTTGGCATCTaGACAGGCAACAAGAATAGA +
Preference number: 2 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSQSFGI*TGNKNR
Trigger: TCTATTCTTGTTGCCTGTCCAGATGCCAAAACTCTG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCCTGGGATCCTCCTATaGGGGTTGAGGGAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEPGILL*GLREGK
Trigger: CTTCCCCTCCCTCAACCCCAATAGGAGGATCCCAGG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGGAAGGGGATGGGGCTTaGGCTGTGGGAAGAAATGGC +
Preference number: 3 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEEGDGA*AVGRNG
Trigger: GCCATTTCTTCCCACAGCCAAAGCCCCATCCCCTTC...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR TCA 72 bp CAAGCCAGGCAAGCCCCTGGGGCAGAAGGGACAGGCTaGGATAGCAGCTTAATGGATGGATGGGAGGACAAC +
Preference number: 3 (lower is better)
Translates to: QARQAPGAEGTG*DSSLMDGWEDN
Trigger: GTTGTCCTCCCATCCATCCATTAAGCTGCTATCTCAGCCTGTCCCTTCTGCCCCAGGGGCTTGCCTGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCACCCCTGCTCTGTCTaGGGGGAAGAGTTCCAATTC +
Preference number: 3 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGHPCSV*GEEFQF
Trigger: GAATTGGAACTCTTCCCCCAAGACAGAGCAGGGGTG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR TCA 72 bp AGGGCTCCCAAAGACACACAAGTTGTGCACAGAACCTaGTGCCTCCAAAGGGAATCCAGAGGGCCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: RAPKDTQVVHRT*CLQRESRGPPS
Trigger: GGAAGGGGGCCCTCTGGATTCCCTTTGGAGGCATCAGGTTCTGTGCACAACTTGTGTGTCTTTGGGAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 72 bp AAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTaGTCCCAGAGGAGCTCTTGCCTCCTCACTAAGCTG +
Preference number: 3 (lower is better)
Translates to: KSKPTGPLLKKW*SQRSSCLLTKL
Trigger: CAGCTTAGTGAGGAGGCAAGAGCTCCTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 72 bp TCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTaGTGGTCCCAGAGGAGCTCTTGCCTCCTCACTAAG +
Preference number: 3 (lower is better)
Translates to: SKSKPTGPLLKK*WSQRSSCLLTK
Trigger: CTTAGTGAGGAGGCAAGAGCTCCTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 72 bp AGCCTGAAGCACACACATCATCCACCACTGTCCACATaGCACTCGCCCCACAAACAGCTCCAGACTGAAGCA +
Preference number: 3 (lower is better)
Translates to: SLKHTHHPPLST*HSPHKQLQTEA
Trigger: TGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTGCCATGTGGACAGTGGTGGATGATGTGTGTGCTTCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACCAAAGACACACAAGTaGTGCACAGAACCTGATGCC +
Preference number: 3 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEPKTHK*CTEPDA
Trigger: GGCATCAGGTTCTGTGCACAACTTGTGTGTCTTTGG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCCAAAGACACACAAGTaGTGCACAGAACCTGATGCC +
Preference number: 3 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGPKTHK*CTEPDA
Trigger: GGCATCAGGTTCTGTGCACAACTTGTGTGTCTTTGG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTAAGACAGCAGGAAGGTaGAGGGAGCAGCAACTTGGC +
Preference number: 3 (lower is better)
Translates to: KNSSEAIHALGIREAHKGKTAGR*REQQLG
Trigger: GCCAAGTTGCTGCTCCCTCAACCTTCCTGCTGTCTT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 72 bp GGTGCCCCAAGCTGCCAAAGTTCCCTGCAGATGCCTTaGGGAAGCCTACCATGTTTTCTACAAGCAAACCAG +
Preference number: 3 (lower is better)
Translates to: GAPSCQSSLQMP*GSLPCFLQANQ
Trigger: CTGGTTTGCTTGTAGAAAACATGGTAGGCTTCCCCAAGGCATCTGCAGGGAACTTTGGCAGCTTGGGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTTTCCCTGCAGATGCCTaGGGGAAGCCTACCATGTTT +
Preference number: 3 (lower is better)
Translates to: KNSSEAIHALGIREAHKGFPADA*GKPTMF
Trigger: AAACATGGTAGGCTTCCCCAAGGCATCTGCAGGGAA...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR GCA 72 bp TGTCCCAGATTACTGCATCAAGCTACAGTTCACCCCTaGTCTGTCTTGGGGGAAGAGTTCCAATTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: CPRLLHQATVHP*SVLGEEFQFPG
Trigger: CCCAGGGAATTGGAACTCTTCCCCCAAGACAGAGCAGGGGTGAACTGTAGCTTGATGCAGTAATCTGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTGAAGGGGATGGGGCTTaGGCTGTGGGAAGAAATGGC +
Preference number: 3 (lower is better)
Translates to: NFPPSVARRRNINKDPGLEGDGA*AVGRNG
Trigger: GCCATTTCTTCCCACAGCCAAAGCCCCATCCCCTTC...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR-3UTR CAA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCTTCCCTGCAGATGCCTaGGGGAAGCCTACCATGTTT +
Preference number: 3 (lower is better)
Translates to: SSCLLTKLLSILLQHLITFPADA*GKPTMF
Trigger: AAACATGGTAGGCTTCCCCAAGGCATCTGCAGGGAA...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 72 bp AGTTCAAACCCTGCAGCAACACAGAGTTTTGGCATCTaGACAGGCAACAAGAATAGACATGGAGGCTTGATC +
Preference number: 3 (lower is better)
Translates to: SSNPAATQSFGI*TGNKNRHGGLI
Trigger: GATCAAGCCTCCATGTCTATTCTTGTTGCCTGTCCAGATGCCAAAACTCTGTGTTGCTGCAGGGTTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CCA 72 bp GAAGCCTACCATGTTTTCTACAAGCAAACCAGGGGCTaGGCCAAAGGACAGATACTTCATTTCAAAGTGCAC +
Preference number: 3 (lower is better)
Translates to: EAYHVFYKQTRG*AKGQILHFKVH
Trigger: GTGCACTTTGAAATGAAGTATCTGTCCTTTGGCCCAGCCCCTGGTTTGCTTGTAGAAAACATGGTAGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGACCCCAGGACCTGGTaGCAAACCCGGCCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHDPRTW*QTRPRQ
Trigger: CTGCCGCGGCCGGGTTTGTCACCAGGTCCTGGGGTC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGTGCTGGGCGCGGCCTaGGCCGAAGACCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHVLGAA*AEDLVQ
Trigger: CTGGACGAGGTCTTCGGCGCAGGCCGCGCCCAGCAC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGCTTCCTGTCGGGGCTaGCCTCCACAGGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHASCRG*PPQGRH
Trigger: GTGCCGCCCCTGTGGAGGGCAGCCCCGACAGGAAGC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACAGCCCCAGGCCTGCCTaGCCGCCTGCCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHSPRPA*PPAQQC
Trigger: ACACTGCTGGGCAGGCGGGCAGGCAGGCCTGGGGCT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGCGACCCGAGGAGCCCTaGGTCAGCCGCGCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVRPEEP*VSRARA
Trigger: AGCGCGAGCGCGGCTGACCCAGGGCTCCTCGGGTCG...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCCCCACGGTGGTGGCTaGCCCAAGGCGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEPHGGG*PKAGEG
Trigger: CCCCTCTCCCGCCTTGGGCCAGCCACCACCGTGGGG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGGCGGGGAGGCTGGGGTaGCTGCAGCGAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEAGRLG*LQRGPP
Trigger: GGGAGGACCTCGCTGCAGCCACCCCAGCCTCCCCGC...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGGCTTGGTGAGCGGGTaGGGAGTTCGGCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHGLVSG*GVRRQV
Trigger: GACCTGGCGCCGAACTCCTCACCCGCTCACCAAGCC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGTCTGGCCGAGCCGGTaGAGACCCCAGGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHVWPSR*RPQDLV
Trigger: CACCAGGTCCTGGGGTCTGCACCGGCTCGGCCAGAC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACACCATCTGGCCAGCCTaGGGGGCCTGGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHTIWPA*GAWVTG
Trigger: GCCTGTGACCCAGGCCCCCCAGGCTGGCCAGATGGT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGAGGCTCGGGCTCCGGTaGGGGAAGCCCCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGRLGLR*GKPLAP
Trigger: GGGAGCGAGGGGCTTCCCCCACCGGAGCCCGAGCCT...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCAAGCTCCCGCTGGCTaGGGACAGGGTGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHQAPAG*GQGAVR
Trigger: TCGGACAGCACCCTGTCCTCAGCCAGCGGGAGCTTG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGACGCGTCGCTGGTGCTaGCCGCTCCCGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVTRRWC*PLPSSC
Trigger: GCAAGAGCTCGGGAGCGGGCAGCACCAGCGACGCGT...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCCGTGTACGCGTCGCTaGTGCTGCCCGCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGPCTRR*CCPLPS
Trigger: GCTCGGGAGCGGGCAGCACCAGCGACGCGTACACGG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACTCACGGGGTGGGGACTaGCACTGGGCTGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHSRGGD*HWAVAP
Trigger: AGGAGCCACAGCCCAGTGCCAGTCCCCACCCCGTGA...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACAGGGGCTTCACGGGGTaGGGACTGGCACTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHRGFTG*GLALGC
Trigger: ACAGCCCAGTGCCAGTCCCCACCCCGTGAAGCCCCT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTAGCGGTGCATGGTGGTaGGCACCAGCTCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGSGAWW*APARRR
Trigger: CCGCCTGCGAGCTGGTGCTCACCACCATGCACCGCT...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACACTTGTCGACGCCGATaGGCGAGCGGTGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHTCRRR*ASGAWW
Trigger: CCACCATGCACCGCTCGCTCATCGGCGTCGACAAGT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTCTGGCCGAGCCGGTaGAGACCCCAGGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEVWPSR*RPQDLV
Trigger: CACCAGGTCCTGGGGTCTGCACCGGCTCGGCCAGAC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACACGCGTCGCTGGTGCTaGCCGCTCCCGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDTRRWC*PLPSSC
Trigger: GCAAGAGCTCGGGAGCGGGCAGCACCAGCGACGCGT...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCAGTGGACAGCCAGCTaGTACGGCTTGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHQWTAS*YGLVSG
Trigger: CCCGCTCACCAAGCCGTAGCAGCTGGCTGTCCACTG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCTCCGCACCCGCCCCTaGGCCCCACACATTCCCATG +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGLRTRP*APHIPM
Trigger: CATGGGAATGTGTGGGGCGCAGGGGCGGGTGCGGAG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGTGGGTCTTGCAGCCCTaGCGCCTCCAGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGWVLQP*RLQPHS
Trigger: GGAGTGGGGCTGGAGGCGGCAGGGCTGCAAGACCCA...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGTCACCTGGACGTGCGTaGGCAGCCAGCGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGSPGRA*AASGKA
Trigger: GGCCTTCCCGCTGGCTGCCCACGCACGTCCAGGTGA...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCGCAGCACCGTCACCTaGACGTGCGTGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGRSTVT*TCVGSQ
Trigger: CTGGCTGCCCACGCACGTCCAGGTGACGGTGCTGCG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCGCAGCACCGTCACCTaGACGTGCGTGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDRSTVT*TCVGSQ
Trigger: CTGGCTGCCCACGCACGTCCAGGTGACGGTGCTGCG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGAGCGCCACCGTGGCCTaGCCCAGGAACTTGTCGACG +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPESATVA*PRNLST
Trigger: CGTCGACAAGTTCCTGGGCCAGGCCACGGTGGCGCT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATACCACTGCGTGTGCTaGGCGCGGCCTGCGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEYHCVC*ARPAPK
Trigger: CTTCGGCGCAGGCCGCGCCCAGCACACGCAGTGGTA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTGACCCTCAGGGCAGCTaGCGGGTGCAGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGDPQGS*RVQTGR
Trigger: CCTGCCTGTCTGCACCCGCCAGCTGCCCTGAGGGTC...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACGCTGCTACGGCTTGGTaGGCGGGTGAGGAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDAATAW*AGEEFG
Trigger: GCCGAACTCCTCACCCGCTCACCAAGCCGTAGCAGC...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGGGATCTTGAGGGTGTaGAGAGGCGCGGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVGILRV*RGAVAW
Trigger: CCAAGCCACCGCGCCTCTTCACACCCTCAAGATCCC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGGGTCAGGGACGACTTaGGCAGCTTGTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHGSGTT*AACCGG
Trigger: TCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACTGGCTGAGGACAGGGTaGTGTCCGAGCCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDWLRTG*CPSPAR
Trigger: CCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCA...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCAACCTGGACTGGCTTaGCCTCTGGTAGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGQPGLA*PLVAGP
Trigger: GGGCCCGGCTACCAGAGGGCAAGCCAGTCCAGGTTG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGGCTCCCTCCTTCTCTaGCACAGCCTCAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVGSLLL*HSLRGG
Trigger: GCCTCCTCTGAGGCTGTGGCAGAGAAGGAGGGAGCC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTGCTTCCTGTCGGGGCTaGCCTCCACAGGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGASCRG*PPQGRH
Trigger: GTGCCGCCCCTGTGGAGGGCAGCCCCGACAGGAAGC...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAAGACTGGAGCGGGACTaGTTCCTGTCGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEERLERD*FLSGLP
Trigger: GGGCAGCCCCGACAGGAAGCAGTCCCGCTCCAGTCT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGAGCTCCCGCTCCCGCTaGAGGAGCAGGCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGSSRSR*RSRLMS
Trigger: GCTCATCAGCCTGCTCCTGCAGCGGGAGCGGGAGCT...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATCCCTGGGGCTCAGCTaGCTTCGCAGTCATGGCCCC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEESLGLS*LRSHGP
Trigger: GGGGCCATGACTGCGAAGGCAGCTGAGCCCCAGGGA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTTGCCGGACTCTGCCCTaGTTCCACTTCCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGCRTLP*FHFRGW
Trigger: CCAGCCCCGGAAGTGGAAGCAGGGCAGAGTCCGGCA...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTAGCGCCACCGTGGCCTaGCCCAGGAACTTGTCGACG +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGSATVA*PRNLST
Trigger: CGTCGACAAGTTCCTGGGCCAGGCCACGGTGGCGCT...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACGTCCAGCGCCACCGTaGCCTGGCCCAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEERPAPP*PGPGTC
Trigger: ACAAGTTCCTGGGCCAGGCCACGGTGGCGCTGGACG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACAGCCCAGCGAGGTGTTaGACTGGGTCAGGGACGACT +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHSPARC*TGSGTT
Trigger: AGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCCCTGCCCCCTTCAGTaGACAGCCAGCTGCTACGGC +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGPCPLQ*TASCYG
Trigger: GCCGTAGCAGCTGGCTGTCCACTGAAGGGGGCAGGG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGAAGCGAGCCCGAGATaGAGCTGCGGTGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEEASPR*SCGAAQ
Trigger: CTGTGCGGCACCGCAGCTCCATCTCGGGCTCGCTTC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCCTTGGTGGTGGTGGTaGAAGAGACCCATCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEPWWWW*KRPIRG
Trigger: GCCCCGGATGGGTCTCTTCCACCACCACCACCAAGG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAAGCCAGGCAAGCCCCTaGGGCAGAAGGGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEESQASP*GRRDRL
Trigger: CAGCCTGTCCCTTCTGCCCCAGGGGCTTGCCTGGCT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATGGGAGGTGGGGTGCTaGGCTGCAGCCCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEWEVGC*AAAPCQ
Trigger: CTGACAAGGGGCTGCAGCCCAGCACCCCACCTCCCA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGGCTGGCTCCCCTGGTaGTGCAGAGGAGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVGWLPW*CRGGSQ
Trigger: CTGACTACCTCCTCTGCACCACCAGGGGAGCCAGCC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGGGTGGGGAGGGCTCATaGGGGCCAGGGAGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGGGEGS*GPGSKA
Trigger: AGCCTTACTCCCTGGCCCCCATGAGCCCTCCCCACC...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAACTTGTCGACGCCGATaGGCGAGCGGTGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEETCRRR*ASGAWW
Trigger: CCACCATGCACCGCTCGCTCATCGGCGTCGACAAGT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGCCAGGACTTTAGCCTaGGCACTCAGCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHARTLA*ALSSSC
Trigger: ACAGGAGGAGCTGAGTGCTCAGGCTAAAGTCCTGGC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCTGCAGCAGCGTGGGTaGGGTCTCCATGATCCGCAC +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGLQQRG*GLHDPH
Trigger: GTGCGGATCATGGAGACCTCACCCACGCTGCTGCAG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCTGCAGCAGCGTGGGTaGGGTCTCCATGATCCGCAC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGLQQRG*GLHDPH
Trigger: GTGCGGATCATGGAGACCTCACCCACGCTGCTGCAG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATGGCGGGGATGCAGATaGGAGGCTGGGAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEWRGCR*EAGRIS
Trigger: CGAGATCCTCCCAGCCTCTCATCTGCATCCCCGCCA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACCGATGAGCGAGCGGTaGATGGTGGTGAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEPMSER*MVVSTS
Trigger: GCTGGTGCTCACCACCATGCACCGCTCGCTCATCGG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTTTGTACCACTGCGTGTaGTGGGCGCGGCCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGLYHCV*WARPAP
Trigger: CGGCGCAGGCCGCGCCCAGCACACGCAGTGGTACAA...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCAGCTTGGGGGACTGTaGAGAGTCCCTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDQLGGL*RVPAPF
Trigger: GAAGGGGGCAGGGACTCTGCACAGTCCCCCAAGCTG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCTCCGCACCCGCCCCTaGGCCCCACACATTCCCATG +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMLRTRP*APHIPM
Trigger: CATGGGAATGTGTGGGGCGCAGGGGCGGGTGCGGAG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGCCTGCCTGCCCGCCTaGCCAGCAGTGTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEACLPA*PAVFIL
Trigger: CAGGATAAACACTGCTGGGCAGGCGGGCAGGCAGGC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCAGAGGGCACGTGTCTaGCTGAGGCCTTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHQRARV*LRPSKS
Trigger: GCTTTTGGAAGGCCTCAGGCAGACACGTGCCCTCTG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACACCCACACATCAGCCTaGTGGGAGGTGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHTHTSA*WEVADK
Trigger: CTTGTCAGCCACCTCCCAGCAGGCTGATGTGTGGGT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGTGGCTCCCCTGGTGGTaGAGAGGAGGTAGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGWLPWW*RGGSQG
Trigger: CCCCTGACTACCTCCTCTGCACCACCAGGGGAGCCA...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTTCACCTGGACGTGCGTaGGCAGCCAGCGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGSPGRA*AASGKA
Trigger: GGCCTTCCCGCTGGCTGCCCACGCACGTCCAGGTGA...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACTTCTCGCGGCCCACCTaGATCACCGTGTACGCGTCG +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDFSRPT*ITVYAS
Trigger: CGACGCGTACACGGTGATCCAGGTGGGCCGCGAGAA...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACAGGCCACTATGGGTGTaGCAACCTGGACTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHRPLWV*QPGLAC
Trigger: GCAAGCCAGTCCAGGTTGCCACACCCATAGTGGCCT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACCTTGGTGGTGGTGGTaGAAGAGACCCATCCGGGGC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEPWWWW*KRPIRG
Trigger: GCCCCGGATGGGTCTCTTCCACCACCACCACCAAGG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCGACTTAGGCCTTGGTaGTGGTGGTGGAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHRLRPW*WWWKRP
Trigger: GGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGACCATCTGGCCAGCCTaGGGGGCCTGGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMTIWPA*GAWVTG
Trigger: GCCTGTGACCCAGGCCCCCCAGGCTGGCCAGATGGT...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTACATGCTCGTCCCGCTaGCTCAGCTCCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGTCSSR*LSSRSR
Trigger: GCGGGAGCGGGAGCTGAGCCAGCGGGACGAGCATGT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACGCCCCTCGCTCCCCTTaGGGCTCACAGTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDAPRSP*GSQFLV
Trigger: CACCAGAAACTGTGAGCCCCAAGGGGAGCGAGGGGC...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGGCTTGGTGAGCGGGTaGGGAGTTCGGCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASGLVSG*GVRRQV
Trigger: GACCTGGCGCCGAACTCCTCACCCGCTCACCAAGCC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACCACAGGCCCTCTCCTaGAGAAGTGGTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEPQALS*RSGGPR
Trigger: TCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACGGGTCAGGGACGACTTaGGCAGCTTGTTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDGSGTT*AACCGG
Trigger: TCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCC...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCAGCCCGAGATGGAGCTaGGGTGCCGCACAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASSPRWS*GAAQGP
Trigger: AGGGCCCTGTGCGGCACCGCAGCTCCATCTCGGGCT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACTGCTGTTGCTACGACTaGCTCTGGGCCAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHCCCYD*LWARCH
Trigger: ATGACACCTGGCCCAGAGGCAGTCGTAGCAACAGCA...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACCTCTGAGCTGCTGTTaGTACGACTGCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEPLSCC*YDCLWA
Trigger: GGCCCAGAGGCAGTCGTAGCAACAGCAGCTCAGAGG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCAACCTGGACTGGCTTaGCCTCTGGTAGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMQPGLA*PLVAGP
Trigger: GGGCCCGGCTACCAGAGGGCAAGCCAGTCCAGGTTG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGACCATGCCTGCTCCCTaGCCAACCCACCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVTMPAP*PTHLQL
Trigger: AAGTTGCAGGTGGGTTGGGCAGGGAGCAGGCATGGT...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGGGTGGGGTGCTGGGCTaGAGCCCCTTGTCAGACACC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMGGVLG*SPLSDT
Trigger: GGTGTCTGACAAGGGGCTGCAGCCCAGCACCCCACC...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGGGGACCGACAACCAGTaGACTTGGGGAGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEGTDNQ*TWGGIF
Trigger: GAAGATGCCTCCCCAAGTGCACTGGTTGTCGGTCCC...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCTGGCCCAGCAGGGTTaGAGAGGAGCAGCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDLAQQG*RGAAVR
Trigger: TCTGACAGCTGCTCCTCTGCAACCCTGCTGGGCCAG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAAGCCCAGCGAGGTGTTaGACTGGGTCAGGGACGACT +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEESPARC*TGSGTT
Trigger: AGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGATGGGTGTGGCAACCTaGACTGGCTTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEMGVAT*TGLPSG
Trigger: ACCAGAGGGCAAGCCAGTCCAGGTTGCCACACCCAT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCAGAGGAGGCCACTATaGGTGTGGCAACCTGGACTG +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEQRRPL*VWQPGL
Trigger: CAGTCCAGGTTGCCACACCCATAGTGGCCTCCTCTG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGTCACGGGGTGGGGACTaGGTTTCTGAGTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGSRGGD*VSESGP
Trigger: AGGACCCGACTCAGAAACCCAGTCCCCACCCCGTGA...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000258098.6
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCACATGCTCGTCCCGCTaGCTCAGCTCCCGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASTCSSR*LSSRSR
Trigger: GCGGGAGCGGGAGCTGAGCCAGCGGGACGAGCATGT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACATGAAAACAGGCAGGTaGGAAAGACCCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHMKTGR*ERPRAP
Trigger: GGGAGCCCTGGGTCTTTCCCACCTGCCTGTTTTCAT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGAAGCCATCCATGCCCTaGGCATTAGGGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEKPSMP*ALGRPT
Trigger: TGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCCAGGATCTCGCTCCTaGCCTCTGGACGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMPGSRS*PLDAAC
Trigger: GCAGGCTGCGTCCAGAGGCCAGGAGCGAGATCCTGG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGCCGCGCTCGCGCTCTaGTGGTTCGGTCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASAALAL*WFGPKS
Trigger: GGACTTGGGACCGAACCACCAGAGCGCGAGCGCGGC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGTTCCACTTCCGGGGCTaGCAGTTCCCTGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEFHFRG*QFPVWF
Trigger: GAACCAGACAGGGAACTGCCAGCCCCGGAAGTGGAA...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGCCTTCTCCAACCTCTaGAGTCCCCCAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVAFSNL*SPPDVL
Trigger: CAGCACATCTGGGGGACTCCAGAGGTTGGAGAAGGC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCTGTGGCTCCTCAGCTaGTCGTGTCTCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGLWLLS*SCLQGQ
Trigger: CTGCCCTTGGAGACACGACCAGCTGAGGAGCCACAG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGATGCCCCACTGCAGATaGGAGAGTTCAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVMPHCR*ESSGGE
Trigger: CTCTCCTCCTGAACTCTCTCATCTGCAGTGGGGCAT...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTAGACAGCAGGAAGGTTaGGGGAGCAGCAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGRQQEG*GSSNLA
Trigger: GGCCAAGTTGCTGCTCCCTCAACCTTCCTGCTGTCT...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGGGGTCAGATTCTACCTaGGGAGACACGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGGSDST*GDTSRL
Trigger: CAGCCTGGACGTGTCTCCTCAGGTAGAATCTGACCC...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCTGCAGGAGAAATGGTaGCCACATCCCAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGLQEKW*PHPKAR
Trigger: CCTGGCCTTGGGATGTGGTCACCATTTCTCCTGCAG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTGTGCTGGGCGCGGCCTaGGCCGAAGACCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLVLGAA*AEDLVQ
Trigger: CTGGACGAGGTCTTCGGCGCAGGCCGCGCCCAGCAC...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGTGCAGCTTGTACCACTaGGTGTGCTGGGCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMCSLYH*VCWARP
Trigger: AGGCCGCGCCCAGCACACGCAGTGGTACAAGCTGCA...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGGATCCTCTATGGCGCTaGTTGGGAGGATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGDPLWR*LGGWQR
Trigger: CCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATC...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCCATCTTGCCCAGGCTaGCCAGGTCAGGATCCTCTA +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGPSCPG*PGQDPL
Trigger: TAGAGGATCCTGACCTGGGCAGCCTGGGCAAGATGG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGAGAAGCCTTTGGCTTTaGCCATCTTGCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPERSLWL*PSCPGC
Trigger: GCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCAGTGGACAGCCAGCTaGTACGGCTTGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMQWTAS*YGLVSG
Trigger: CCCGCTCACCAAGCCGTAGCAGCTGGCTGTCCACTG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCGAGATGGAGCTGCGGTaGCGCACAGGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITEMELR*RTGPWG
Trigger: GCCCCAGGGCCCTGTGCGGCACCGCAGCTCCATCTC...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTGCACTGCCTCTGAGCTaGTGTTGCTACGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGALPLS*CCYDCL
Trigger: GAGGCAGTCGTAGCAACAGCAGCTCAGAGGCAGTGC...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACGCACTGCCTCTGAGCTaGTGTTGCTACGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDALPLS*CCYDCL
Trigger: GAGGCAGTCGTAGCAACAGCAGCTCAGAGGCAGTGC...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGACCCATCCGGGGCTTaGGTTCCTCCTTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASDPSGA*VPPSGL
Trigger: GAGCCCGGAAGGAGGAACGCAAGCCCCGGATGGGTC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCACTGCTCAGGGCTATaGTCAGACTGGAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGHCSGL*SDWSGT
Trigger: AGTCCCGCTCCAGTCTGAGCATAGCCCTGAGCAGTG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGGCTTCTCCAGCCCACTaGTCAGGGCTATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGASPAH*SGLCSD
Trigger: GTCTGAGCATAGCCCTGAGCAGTGGGCTGGAGAAGC...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGGCTGCCAAAGTTCCCTaGAGATGCCTTGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGAAKVP*RCLGEA
Trigger: GGCTTCCCCAAGGCATCTGCAGGGAACTTTGGCAGC...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCAGGGTGCCCCAAGCTaGCAAAGTTCCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGQGAPS*QSSLQM
Trigger: CATCTGCAGGGAACTTTGGCAGCTTGGGGCACCCTG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTAAGCAGAACCATGCCTaGTCCCTGCCCAACCCACCT +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGKQNHA*SLPNPP
Trigger: AGGTGGGTTGGGCAGGGAGCAGGCATGGTTCTGCTT...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAAGCAAAGCAGAACCATaGCTGCTCCCTGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEESKAEP*LLPAQP
Trigger: GGGTTGGGCAGGGAGCAGGCATGGTTCTGCTTTGCT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGGCTCCAGCCACACGCTaGTCCCACCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMAPATR*SHLFLL
Trigger: GAGGAGGAAGAGGTGGGAGCAGCGTGTGGCTGGAGC...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGGGTCAGGATCCTCTATaGCGCTGCTTGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGGQDPL*RCLGGW
Trigger: CCATCCTCCCAAGCAGCGCCATAGAGGATCCTGACC...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCAAGGAGCCAGAGGATaGAAGCGAGCCCGAGATGGA +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDQGARG*KRARDG
Trigger: TCCATCTCGGGCTCGCTTCCATCCTCTGGCTCCTTG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGTGCTACGACTGCCTCTaGGCCAGGTGTCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGCYDCL*ARCHLW
Trigger: CCACAGATGACACCTGGCCCAGAGGCAGTCGTAGCA...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACTCTGAGTCGGGTCCTTaGCTTCTCTCAAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHSESGP*LLSSQT
Trigger: GGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAGA...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGGGCTATGCTCAGACTaGAGCGGGACTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEGLCSD*SGTASC
Trigger: ACAGGAAGCAGTCCCGCTCCAGTCTGAGCATAGCCC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGATGAAAACAGGCAGGTaGGAAAGACCCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEMKTGR*ERPRAP
Trigger: GGGAGCCCTGGGTCTTTCCCACCTGCCTGTTTTCAT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTAGCAGACTCAGGACATaGCAGAGACTGGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGSRLRT*QRLAQT
Trigger: GGTCTGGGCCAGTCTCTGCCATGTCCTGAGTCTGCT...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCCACCACTGTCCACATaGCACTCGCCCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGPPLST*HSPHKQ
Trigger: CTGTTTGTGGGGCGAGTGCCATGTGGACAGTGGTGG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACTCCCAAGCCCCAGCCTaGAGGGACCTACACATTGGA +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDSQAPA*RDLHIG
Trigger: TCCAATGTGTAGGTCCCTCCAGGCTGGGGCTTGGGA...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATCCCAAGCCCCAGCCTaGAGGGACCTACACATTGGA +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEESQAPA*RDLHIG
Trigger: TCCAATGTGTAGGTCCCTCCAGGCTGGGGCTTGGGA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGATTCAGGCTGCACCTaGGGAGCAGGCTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEDSGCT*GAGSSD
Trigger: GTCTGATGAGCCTGCTCCCCAGGTGCAGCCTGAATC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAATGCAGATGAGAGGCTaGGAGGATCTCGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEMQMRG*EDLGSP
Trigger: AGGGGAGCCGAGATCCTCCCAGCCTCTCATCTGCAT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACAGGTCCTCTTATGGGTaGACAGCTTGGGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDRSSYG*TAWGTV
Trigger: CACAGTCCCCCAAGCTGTTCACCCATAAGAGGACCT...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGAAATGTGGCTCCCATTaGCACAGAGCGAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGKCGSH*HRAKSG
Trigger: CCCGCTCTTCGCTCTGTGTCAATGGGAGCCACATTT...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGGGGCACGTGTCTGCCTaGGGCCTTCCAAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMGHVSA*GLPKAS
Trigger: GCTTGCTTTTGGAAGGCCTCAGGCAGACACGTGCCC...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACATTCAAAAACTCCTCTaGAGCCATCCATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHIQKLL*SHPCPG
Trigger: CCCAGGGCATGGATGGCTTCAGAGGAGTTTTTGAAT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGGTGCTATGTCGGCTATaGGCTCCTCGAAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGVLCRL*APRRRG
Trigger: ACCCCTTCTTCGAGGAGCTCATAGCCGACATAGCAC...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGGTTCCTTCTCCTTCTTaGCTGGCTTGGAGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEVPSPS*LAWSAA
Trigger: AGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAAC...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACAGAAGCCTTTGGCTTTaGCCATCTTGCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDRSLWL*PSCPGC
Trigger: GCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCT...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACGGGAAGAGACAGCTTaGAAGGAGCCAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEREETA*KEPEDG
Trigger: TCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCCTCTGAGCTGCTGTTaGTACGACTGCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMPLSCC*YDCLWA
Trigger: GGCCCAGAGGCAGTCGTAGCAACAGCAGCTCAGAGG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGAACAGCCCACAGCAGTaGTGTCCATTCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVNSPQQ*CPFPFP
Trigger: TGGGAATGGGAATGGACAGCACTGCTGTGGGCTGTT...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCTGTCTGCCGGACTCTaGCCTGCTTCCACTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASLSAGL*PASTSG
Trigger: CCCGGAAGTGGAAGCAGGGCAGAGTCCGGCAGACAG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGGTTACTCAGCCCCACTaGGGCCTTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMVTQPH*GLLLLL
Trigger: GAGGAGGAGGAGAAGGCCGCAGTGGGGCTGAGTAAC...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGGGAGGAAGAAGCCTTTaGCTTTGCCCATCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEGGRSL*LCPSCP
Trigger: TGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCC...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGGAGGAAGAAGCCTTTaGCTTTGCCCATCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVGGRSL*LCPSCP
Trigger: TGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTAGGCCTTGGTGGTGGTaGTGGAAGAGACCCATCCGG +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGRPWWW*WKRPIR
Trigger: CCGGATGGGTCTCTTCCACCACCACCACCAAGGCCT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCTCCGACTTAGGCCTTaGTGGTGGTGGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDLRLRP*WWWWKR
Trigger: TCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACTCAGGTGGTAGTACTTaGCCGACTGGTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDSGGST*PTGPAQ
Trigger: CTGTGCTGGACCAGTCGGCCAAGTACTACCACCTGA...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGACCCCTGCTCTGTCTTaGGGGAAGAGTTCCAATTCC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPETPALS*GKSSNS
Trigger: GGAATTGGAACTCTTCCCCCAAGACAGAGCAGGGGT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCTCCTGAAGAAGTGGTaGTCCCAGAGGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDLLKKW*SQRSSC
Trigger: GCAAGAGCTCCTCTGGGACCACCACTTCTTCAGGAG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCCTCTCCTGAAGAAGTaGTGGTCCCAGAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGPLLKK*WSQRSS
Trigger: AGAGCTCCTCTGGGACCACCACTTCTTCAGGAGAGG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACCTCTCCTGAAGAAGTaGTGGTCCCAGAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEPLLKK*WSQRSS
Trigger: AGAGCTCCTCTGGGACCACCACTTCTTCAGGAGAGG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCATAATCCAGGTGGGGTaGCTTCAGGGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASIIQVG*LQGRRW
Trigger: CCACCGCCGCCCCTGAAGCCACCCCACCTGGATTAT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCCTCGCTCCTGGCCTCTaGACGCAGCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITLAPGL*TQPAGS
Trigger: GCTGCCAGCAGGCTGCGTCCAGAGGCCAGGAGCGAG...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCTGCCTTCGCAGTCATaGCCCCAGGGCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASLPSQS*PQGLGL
Trigger: AAGACCCAGGCCCTGGGGCCATGACTGCGAAGGCAG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGACAACCAGTGCACTTaGGGAGGCATCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEDNQCT*GGIFSL
Trigger: GAGGGAGAAGATGCCTCCCCAAGTGCACTGGTTGTC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGTCTCTCCCTCCTCCTTaGTCTCCGGGGGACCGACAA +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMSLPPP*SPGDRQ
Trigger: TTGTCGGTCCCCCGGAGACCAAGGAGGAGGGAGAGA...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACTCAAGGCATCTTCCTTaGAGACCCACACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHSRHLP*RPTHQP
Trigger: AGGCTGATGTGTGGGTCTCCAAGGAAGATGCCTTGA...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTCAAGCTCCCGCTGGCTaGGGACAGGGTGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLQAPAG*GQGAVR
Trigger: TCGGACAGCACCCTGTCCTCAGCCAGCGGGAGCTTG...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTGCTGCTACGGCTTGGTaGGCGGGTGAGGAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLAATAW*AGEEFG
Trigger: GCCGAACTCCTCACCCGCTCACCAAGCCGTAGCAGC...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTGCCTGGGTCACAGGCTaGATGCTCCCAGATGTGACT +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGAWVTG*MLPDVT
Trigger: AGTCACATCTGGGAGCATTCAGCCTGTGACCCAGGC...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTGTTGTGCACAGAACCTaGTGCCTCCAAAGGGAATCC +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGVVHRT*CLQRES
Trigger: GGATTCCCTTTGGAGGCATCAGGTTCTGTGCACAAC...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACCACACATTCCCATGTaGCACTCGTGGAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEPHIPM*HSWKGQ
Trigger: CTGACCTTTCCACGAGTGTCACATGGGAATGTGTGG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCCATTCCCAGGGCCCTaGGAGAGCCATCCCTATGTA +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMPFPGP*ESHPYV
Trigger: TACATAGGGATGGCTCTCTCAGGGCCCTGGGAATGG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGCAGAAGGGACAGGCTaGGATAGCAGCTTAATGGAT +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVAEGTG*DSSLMD
Trigger: ATCCATTAAGCTGCTATCTCAGCCTGTCCCTTCTGC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTGCTCACAGTTTCTGGTaGTTCAGGCTGCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGAHSFW*FRLHLG
Trigger: CCCCAGGTGCAGCCTGAATCACCAGAAACTGTGAGC...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCATTGTACCACTGCGTGTaGTGGGCGCGGCCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKALYHCV*WARPAP
Trigger: CGGCGCAGGCCGCGCCCAGCACACGCAGTGGTACAA...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCTGGCTGAGGACAGGGTaGTGTCCGAGCCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITWLRTG*CPSPAR
Trigger: CCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCA...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAAGCCCGAGATGGAGCTaGGGTGCCGCACAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKASPRWS*GAAQGP
Trigger: AGGGCCCTGTGCGGCACCGCAGCTCCATCTCGGGCT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTAGCTCCCGCTCCCGCTaGAGGAGCAGGCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLSSRSR*RSRLMS
Trigger: GCTCATCAGCCTGCTCCTGCAGCGGGAGCGGGAGCT...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACAGGCAAGACAGACGATaGCCCACTGCAGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDRQDRR*PTADER
Trigger: TCTCTCATCTGCAGTGGGGCATCGTCTGTCTTGCCT...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACAAGACACACAAGTTGTaGACAGAACCTGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHKTHKL*TEPDAS
Trigger: GGAGGCATCAGGTTCTGTGCACAACTTGTGTGTCTT...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTAGCCCCAGGCCTGCCTaGCCGCCTGCCCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLSPRPA*PPAQQC
Trigger: ACACTGCTGGGCAGGCGGGCAGGCAGGCCTGGGGCT...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTTCTGGTGATTCAGGCTaGACCTGGGGAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGSGDSG*TWGAGS
Trigger: TGAGCCTGCTCCCCAGGTGCAGCCTGAATCACCAGA...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTGGAGGCTGGGGTGGCTaGAGCGAGGTCCTCCCTAAG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLGGWGG*SEVLPK
Trigger: CTTAGGGAGGACCTCGCTGCAGCCACCCCAGCCTCC...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCAGCGAGGTGTTGGACTaGGTCAGGGACGACTTGCGC +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASSEVLD*VRDDLR
Trigger: GCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCCACTCGCATCTGGTTaGCCTCATCGCTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMPLASG*PHRCRS
Trigger: GGACCTACAGCGATGAGGCCAACCAGATGCGAGTGG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGTGCTACGACTGCCTCTaGGCCAGGTGTCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMCYDCL*ARCHLW
Trigger: CCACAGATGACACCTGGCCCAGAGGCAGTCGTAGCA...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTAGGCCACTATGGGTGTaGCAACCTGGACTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGRPLWV*QPGLAC
Trigger: GCAAGCCAGTCCAGGTTGCCACACCCATAGTGGCCT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCAAACCAGCTACTCTTaGCCTTTTCCTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDQTSYS*PFPPHW
Trigger: CCAGTGGGGAGGAAAAGGCCAAGAGTAGCTGGTTTG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACGAGGGACCTACACATTaGAGGTGGTCAAGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDEGPTH*RWSRAR
Trigger: TCGAGCTCTTGACCACCTCCAATGTGTAGGTCCCTC...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTTATGTATTCAACAGGTaGGAGGGGGACGCCACACAG +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGYVFNR*EGDATQ
Trigger: CTGTGTGGCGTCCCCCTCCCACCTGTTGAATACATA...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGGAGGGAGCAGCAACTTaGCCAGACCAAGAGATTAAC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEEGAAT*PDQEIN
Trigger: GTTAATCTCTTGGTCTGGCCAAGTTGCTGCTCCCTC...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGAGGGAGCAGCAACTTaGCCAGACCAAGAGATTAAC +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVEGAAT*PDQEIN
Trigger: GTTAATCTCTTGGTCTGGCCAAGTTGCTGCTCCCTC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCAGCCAGGCAAGCCCCTaGGGCAGAAGGGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITSQASP*GRRDRL
Trigger: CAGCCTGTCCCTTCTGCCCCAGGGGCTTGCCTGGCT...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCTGGCCCTCGAGGCACTaGGGAGAGAGGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITWPSRH*GEREQV
Trigger: CACCTGCTCCCTCTCTCCCCAGTGCCTCGAGGGCCA...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCACACATCAGCCTGCTaGGAGGTGGCTGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMHTSAC*EVADKD
Trigger: GTCCTTGTCAGCCACCTCCCAGCAGGCTGATGTGTG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCGACCCCAGGACCTGGTaGCAAACCCGGCCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSDPRTW*QTRPRQ
Trigger: CTGCCGCGGCCGGGTTTGTCACCAGGTCCTGGGGTC...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTAAATGTGGCTCCCATTaGCACAGAGCGAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGKCGSH*HRAKSG
Trigger: CCCGCTCTTCGCTCTGTGTCAATGGGAGCCACATTT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGTCCAAGCACTGCCTCTaGGCTGCTGTTGCTACGACT +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMSKHCL*AAVATT
Trigger: AGTCGTAGCAACAGCAGCTCAGAGGCAGTGCTTGGA...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGCCAGGACTTTAGCCTaGGCACTCAGCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASARTLA*ALSSSC
Trigger: ACAGGAGGAGCTGAGTGCTCAGGCTAAAGTCCTGGC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCTGGGGACTGGGTTTCTaGGTCGGGTCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASWGLGF*VGSLAS
Trigger: AGAAGCCAAGGACCCGACTCAGAAACCCAGTCCCCA...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258098.6
CDS-3UTR TCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGCCTGGGTCACAGGCTaGATGCTCCCAGATGTGACT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASAWVTG*MLPDVT
Trigger: AGTCACATCTGGGAGCATTCAGCCTGTGACCCAGGC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACGTGGGAAGAAATGGCTaGCCATCCTTGGGGGATAAT +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDVGRNG*PSLGDN
Trigger: ATTATCCCCCAAGGATGGTCAGCCATTTCTTCCCAC...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGGAAGAAATGGCTaGCCATCCTTGGGGGATAAT +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEVGRNG*PSLGDN
Trigger: ATTATCCCCCAAGGATGGTCAGCCATTTCTTCCCAC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTACATCCAGGGGCTCTTaGCCCCGCCCACCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLTSRGS*PRPPKA
Trigger: TGCCTTTGGTGGGCGGGGTCAAGAGCCCCTGGATGT...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTGGATCTCGGCTCCCCTaGAACAAGAAGGGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGGSRLP*NKKGFK
Trigger: CTTGAACCCCTTCTTGTTTCAGGGGAGCCGAGATCC...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCATGTACGCGTCGCTGGTaGTGCCCGCTCCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKACTRRW*CPLPSS
Trigger: AGAGCTCGGGAGCGGGCAGCACCAGCGACGCGTACA...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGTTGCCTGGCTTGGAGTaGAGCTTGTACCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMLPGLE*SLYHCV
Trigger: CACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAA...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGATCCTCTATGGCGCTaGTTGGGAGGATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASDPLWR*LGGWQR
Trigger: CCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCCATCTTGCCCAGGCTaGCCAGGTCAGGATCCTCTA +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASPSCPG*PGQDPL
Trigger: TAGAGGATCCTGACCTGGGCAGCCTGGGCAAGATGG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCGAGATGGAGCTGCGGTaGCGCACAGGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSEMELR*RTGPWG
Trigger: GCCCCAGGGCCCTGTGCGGCACCGCAGCTCCATCTC...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTGGCTCCCTCCTTCTCTaGCACAGCCTCAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLGSLLL*HSLRGG
Trigger: GCCTCCTCTGAGGCTGTGGCAGAGAAGGAGGGAGCC...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCAGGGTGCCCCAAGCTaGCAAAGTTCCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASQGAPS*QSSLQM
Trigger: CATCTGCAGGGAACTTTGGCAGCTTGGGGCACCCTG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGTCCCAGAGGAGCTCTTaGCTCCTCACTAAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGSQRSS*LLTKLL
Trigger: TAACAGCTTAGTGAGGAGGCAAGAGCTCCTCTGGGA...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCACCATGCCTGCTCCCTaGCCAACCCACCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASTMPAP*PTHLQL
Trigger: AAGTTGCAGGTGGGTTGGGCAGGGAGCAGGCATGGT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACTCCAGCCCCACTCCTaGAGGGGCCAGGATCTCGCT +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKALQPHS*RGQDLA
Trigger: AGCGAGATCCTGGCCCCTGCAGGAGTGGGGCTGGAG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACGTCCAGCGCCACCGTaGCCTGGCCCAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKARPAPP*PGPGTC
Trigger: ACAAGTTCCTGGGCCAGGCCACGGTGGCGCTGGACG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGGTCAGGATCCTCTATaGCGCTGCTTGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASGQDPL*RCLGGW
Trigger: CCATCCTCCCAAGCAGCGCCATAGAGGATCCTGACC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCGACTTAGGCCTTGGTaGTGGTGGTGGAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASRLRPW*WWWKRP
Trigger: GGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTCTCCGACTTAGGCCTTaGTGGTGGTGGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGLRLRP*WWWWKR
Trigger: TCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAG...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCCTACACATTGGAGGTaGTCAAGAGCTCGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEPTHWR*SRARKA
Trigger: TGCTTTTCGAGCTCTTGACCACCTCCAATGTGTAGG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTTCCAGGCAAGCTGACTaGTCTAGTATGGCTAAGTCC +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGSRQAD*SSMAKS
Trigger: GGACTTAGCCATACTAGACCAGTCAGCTTGCCTGGA...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACTCCAGGCAAGCTGACTaGTCTAGTATGGCTAAGTCC +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDSRQAD*SSMAKS
Trigger: GGACTTAGCCATACTAGACCAGTCAGCTTGCCTGGA...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTTCCCTGCAGATGCCTTaGGGAAGCCTACCATGTTTT +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGSLQMP*GSLPCF
Trigger: AAAACATGGTAGGCTTCCCCAAGGCATCTGCAGGGA...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTCAGCCTGCTGGGAGGTaGCTGACAAGGACCCAAGCC +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLQPAGR*LTRTQA
Trigger: GGCTTGGGTCCTTGTCAGCCACCTCCCAGCAGGCTG...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCCAGGCTCTGGGGGAGTaGGCAGCTCTTCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITQALGE*AALLDQ
Trigger: CTGGTCCAGAAGAGCTGCCCACTCCCCCAGAGCCTG...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCTCCAAGCACTGCCTCTaGGCTGCTGTTGCTACGACT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASSKHCL*AAVATT
Trigger: AGTCGTAGCAACAGCAGCTCAGAGGCAGTGCTTGGA...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTCCACACATTCCCATGTaGCACTCGTGGAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGPHIPM*HSWKGQ
Trigger: CTGACCTTTCCACGAGTGTCACATGGGAATGTGTGG...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGTGGCAGCAAAGACGTTaGAGGTGTTGTCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMWQQRR*RCCPTQ
Trigger: CTGAGTGGGACAACACCTTCAACGTCTTTGCTGCCA...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCATGCAGCTTGTACCACTaGGTGTGCTGGGCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKACSLYH*VCWARP
Trigger: AGGCCGCGCCCAGCACACGCAGTGGTACAAGCTGCA...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTGACCCATCCGGGGCTTaGGTTCCTCCTTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLDPSGA*VPPSGL
Trigger: GAGCCCGGAAGGAGGAACGCAAGCCCCGGATGGGTC...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTAGACTGGAGCGGGACTaGTTCCTGTCGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLRLERD*FLSGLP
Trigger: GGGCAGCCCCGACAGGAAGCAGTCCCGCTCCAGTCT...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGCTTGTCCCAGATTACTaGATCAAGCTACAGTTCACC +
Preference number: 4 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPELVPDY*IKLQFT
Trigger: GGTGAACTGTAGCTTGATGCAGTAATCTGGGACAAG...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTCATTTCAAAGTGCACTaGAGCCAAGCCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGHFKVH*SQARQA
Trigger: GGCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATG...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATACTTCATTTCAAAGTaGACTGCAGCCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEYFISK*TAAKPG
Trigger: GCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCATTCTCGCGGCCCACCTaGATCACCGTGTACGCGTCG +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAFSRPT*ITVYAS
Trigger: CGACGCGTACACGGTGATCCAGGTGGGCCGCGAGAA...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCTACCACTGCGTGTGCTaGGCGCGGCCTGCGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSYHCVC*ARPAPK
Trigger: CTTCGGCGCAGGCCGCGCCCAGCACACGCAGTGGTA...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCCTTCTTGCCTGGCTTaGAGTGCAGCTTGTACCACT +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMPSCLA*SAACTT
Trigger: AGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTCCTTCTTGCCTGGCTTaGAGTGCAGCTTGTACCACT +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGPSCLA*SAACTT
Trigger: AGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGG...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCAGCGAGGTGTTGGACTaGGTCAGGGACGACTTGCGC +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITSEVLD*VRDDLR
Trigger: GCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCT...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGAGTCCTTCAGCCTTTTaGTGTCCACCATCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMSPSAF*CPPSGQ
Trigger: CTGGCCAGATGGTGGACACCAAAAGGCTGAAGGACT...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCTCAGGTGGTAGTACTTaGCCGACTGGTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASSGGST*PTGPAQ
Trigger: CTGTGCTGGACCAGTCGGCCAAGTACTACCACCTGA...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCAGAGTTTTGGCATCTaGACAGGCAACAAGAATAGA +
Preference number: 4 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHQSFGI*TGNKNR
Trigger: TCTATTCTTGTTGCCTGTCCAGATGCCAAAACTCTG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCTCCTGAAGAAGTGGTaGTCCCAGAGGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASLLKKW*SQRSSC
Trigger: GCAAGAGCTCCTCTGGGACCACCACTTCTTCAGGAG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGAACCCTGGGGACCAGTaGATACTTTTCTCAGATTTG +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVNPGDQ*ILFSDL
Trigger: CAAATCTGAGAAAAGTATCCACTGGTCCCCAGGGTT...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAGCGCTCGCGCTCTGGTaGTTCGGTCCCAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAALALW*FGPKSR
Trigger: TCTGGACTTGGGACCGAACCACCAGAGCGCGAGCGC...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCATCTTCCAGGCCAGGCTaGCCCAGCAGGGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKASSRPG*PSRVAE
Trigger: CTCTGCAACCCTGCTGGGCCAGCCTGGCCTGGAAGA...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTCCATTCCCAGGGCCCTaGGAGAGCCATCCCTATGTA +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLPFPGP*ESHPYV
Trigger: TACATAGGGATGGCTCTCTCAGGGCCCTGGGAATGG...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTCCAGGCTGGGTTTCTaGGTCGGGTCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLSRLGF*VGSLAS
Trigger: AGAAGCCAAGGACCCGACTCAGAAACCCAGCCTGGA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTCTCCTCCTGGGATCTTaGGGGTGTGAAGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLLLLGS*GCEEAR
Trigger: CCGCGCCTCTTCACACCCTCAAGATCCCAGGAGGAG...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCTGCTGGGAGGTGGCTaGCAAGGACCCAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSLLGGG*QGPKPL
Trigger: GAGGGGCTTGGGTCCTTGTCAGCCACCTCCCAGCAG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATCTTCTGGACCAGAATaGATAGAAGATTCCCTCGAC +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEESSGPE*IEDSLD
Trigger: GTCGAGGGAATCTTCTATTCATTCTGGTCCAGAAGA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTGCTTCTCCAGCCCACTaGTCAGGGCTATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLASPAH*SGLCSD
Trigger: GTCTGAGCATAGCCCTGAGCAGTGGGCTGGAGAAGC...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTGCCTGCCTGCCCGCCTaGCCAGCAGTGTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLACLPA*PAVFIL
Trigger: CAGGATAAACACTGCTGGGCAGGCGGGCAGGCAGGC...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTCAGAGGGCACGTGTCTaGCTGAGGCCTTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLQRARV*LRPSKS
Trigger: GCTTTTGGAAGGCCTCAGGCAGACACGTGCCCTCTG...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCAGCAAAGCAGAACCATaGCTGCTCCCTGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITSKAEP*LLPAQP
Trigger: GGGTTGGGCAGGGAGCAGGCATGGTTCTGCTTTGCT...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCGAAGCGAGCCCGAGATaGAGCTGCGGTGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSEASPR*SCGAAQ
Trigger: CTGTGCGGCACCGCAGCTCCATCTCGGGCTCGCTTC...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCATGGGTGTGGCAACCTaGACTGGCTTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITMGVAT*TGLPSG
Trigger: ACCAGAGGGCAAGCCAGTCCAGGTTGCCACACCCAT...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCCAGAGGAGGCCACTATaGGTGTGGCAACCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITQRRPL*VWQPGL
Trigger: CAGTCCAGGTTGCCACACCCATAGTGGCCTCCTCTG...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTGGGCTATGCTCAGACTaGAGCGGGACTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLGLCSD*SGTASC
Trigger: ACAGGAAGCAGTCCCGCTCCAGTCTGAGCATAGCCC...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCAGTCCTTCAGCCTTTTaGTGTCCACCATCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASSPSAF*CPPSGQ
Trigger: CTGGCCAGATGGTGGACACCAAAAGGCTGAAGGACT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGATGGCTGACCATCCTTaGGGGATAATAAAGTATGTG +
Preference number: 4 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVMADHP*GIIKYV
Trigger: CACATACTTTATTATCCCCCAAGGATGGTCAGCCAT...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTCCACCACTGTCCACATaGCACTCGCCCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLPPLST*HSPHKQ
Trigger: CTGTTTGTGGGGCGAGTGCCATGTGGACAGTGGTGG...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTGCTTTCCTCCATGTGTaGCGCTCCTCTGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLAFLHV*RSSAPS
Trigger: GGATGGAGCAGAGGAGCGCCACACATGGAGGAAAGC...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTAAGCCATCCATGCCCTaGGCATTAGGGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLKPSMP*ALGRPT
Trigger: TGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTT...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTCATCAACAAGGACCCTaGGCTTCGATTCAAAAACTC +
Preference number: 4 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGHQQGP*ASIQKL
Trigger: GAGTTTTTGAATCGAAGCCCAGGGTCCTTGTTGATG...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCGAGACACGTCCAGGCTaGGTTTCTGAGTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITETRPG*VSESGP
Trigger: AGGACCCGACTCAGAAACCCAGCCTGGACGTGTCTC...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAGAGGACTCATCGTCCTaGCCCTCAGCAGCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAEDSSS*PSAALS
Trigger: AGAGAGCGCTGCTGAGGGCCAGGACGATGAGTCCTC...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAACTGGCACTGGGCTGTaGCTCCTCAGCTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKATGTGL*LLSWSC
Trigger: ACACGACCAGCTGAGGAGCCACAGCCCAGTGCCAGT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCGCAGAAGGGACAGGCTaGGATAGCAGCTTAATGGAT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASAEGTG*DSSLMD
Trigger: ATCCATTAAGCTGCTATCTCAGCCTGTCCCTTCTGC...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTCCACAGGCCCTCTCCTaGAGAAGTGGTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLPQALS*RSGGPR
Trigger: TCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGG...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCATTCAAAAACTCCTCTaGAGCCATCCATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASIQKLL*SHPCPG
Trigger: CCCAGGGCATGGATGGCTTCAGAGGAGTTTTTGAAT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTTGCCTGGCTTGGAGTaGAGCTTGTACCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLLPGLE*SLYHCV
Trigger: CACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAGCTTGGGGGACTGTaGAGAGTCCCTGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSQLGGL*RVPAPF
Trigger: GAAGGGGGCAGGGACTCTGCACAGTCCCCCAAGCTG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTGCTGTTGCTACGACTaGCTCTGGGCCAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLCCCYD*LWARCH
Trigger: ATGACACCTGGCCCAGAGGCAGTCGTAGCAACAGCA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGAAGACACACAAGTTGTaGACAGAACCTGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMKTHKL*TEPDAS
Trigger: GGAGGCATCAGGTTCTGTGCACAACTTGTGTGTCTT...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACGAAAAGCAAAAAGGTaGTCTCTCCGCACCCGCCCC +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKARKAKR*SLRTRP
Trigger: GGGGCGGGTGCGGAGAGAGCACCTTTTTGCTTTTCG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCTTCTCCTTCTTGCCTaGCTTGGAGTGCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASLLLLA*LGVQLV
Trigger: TACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTAGGCCTTGGTGGTGGTaGTGGAAGAGACCCATCCGG +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLRPWWW*WKRPIR
Trigger: CCGGATGGGTCTCTTCCACCACCACCACCAAGGCCT...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAAGCCCCTCCAGGGACTaGAGGGAAATGAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKASPSRD*REMKGM
Trigger: CATCCCCTTCATTTCCCTCCAGTCCCTGGAGGGGCT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCAGAGTTTTGGCATCTaGACAGGCAACAAGAATAGA +
Preference number: 4 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDQSFGI*TGNKNR
Trigger: TCTATTCTTGTTGCCTGTCCAGATGCCAAAACTCTG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCAAGCAAACCAGGGGCTaGGCCAAAGGACAGATACTT +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASKQTRG*AKGQIL
Trigger: AAGTATCTGTCCTTTGGCCCAGCCCCTGGTTTGCTT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAACTTTCCTCCAAGTGTaGCTAGGAGAAGAAACATCA +
Preference number: 4 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEETFLQV*LGEETS
Trigger: TGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGT...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTCCTCCTCCTCCTCCTaGGATCTTGAGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLSSSSS*DLEGVK
Trigger: CTTCACACCCTCAAGATCCCAGGAGGAGGAGGAGGA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTTTGAGTGACAGGGTATaGGGGCAGGACCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLLSDRV*GQDPQG
Trigger: GCCCTGAGGGTCCTGCCCCCATACCCTGTCACTCAA...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTAGACAGCAGGAAGGTTaGGGGAGCAGCAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLRQQEG*GSSNLA
Trigger: GGCCAAGTTGCTGCTCCCTCAACCTTCCTGCTGTCT...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCGGGCACGTGTCTGCCTaGGGCCTTCCAAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSGHVSA*GLPKAS
Trigger: GCTTGCTTTTGGAAGGCCTCAGGCAGACACGTGCCC...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTCGAAAAGCAAAAAGGTaGTCTCTCCGCACCCGCCCC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLRKAKR*SLRTRP
Trigger: GGGGCGGGTGCGGAGAGAGCACCTTTTTGCTTTTCG...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTAACAGCCCACAGCAGTaGTGTCCATTCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLNSPQQ*CPFPFP
Trigger: TGGGAATGGGAATGGACAGCACTGCTGTGGGCTGTT...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCAAGAAGGGGTTGCTCTaGAAAGAGGTGAGGAACGGG +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITKKGLL*KEVRNG
Trigger: CCCGTTCCTCACCTCTTTGCAGAGCAACCCCTTCTT...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CCA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCCTACACATTGGAGGTaGTCAAGAGCTCGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GQRTDTSFQSALQPSQASPTHWR*SRARKA
Trigger: TGCTTTTCGAGCTCTTGACCACCTCCAATGTGTAGG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTATGTATTCAACAGGTaGGAGGGGGACGCCACACAG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLYVFNR*EGDATQ
Trigger: CTGTGTGGCGTCCCCCTCCCACCTGTTGAATACATA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTGCTTTCCTCCATGTGTaGCGCTCCTCTGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLAFLHV*RSSAPS
Trigger: GGATGGAGCAGAGGAGCGCCACACATGGAGGAAAGC...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCGTGAGGAAGAGCAGCTaGGTCAGATTCTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITVRKSS*VRFYLR
Trigger: CCTCAGGTAGAATCTGACCCAGCTGCTCTTCCTCAC...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCGCCAAGCTCTTTGAGTaGCAGGGTATGGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSAKLFE*QGMGAG
Trigger: TCCTGCCCCCATACCCTGTCACTCAAAGAGCTTGGC...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCACTGCTCAGGGCTATaGTCAGACTGGAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSHCSGL*SDWSGT
Trigger: AGTCCCGCTCCAGTCTGAGCATAGCCCTGAGCAGTG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCAAGCAGAACCATGCCTaGTCCCTGCCCAACCCACCT +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSKQNHA*SLPNPP
Trigger: AGGTGGGTTGGGCAGGGAGCAGGCATGGTTCTGCTT...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAGCTGAAGGGAGACCTTaGCTTGTCCTTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAAEGRP*LVLHGQ
Trigger: CTGTCCATGAAGGACAAGCCAAGGTCTCCCTTCAGC...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAGGAGCCAGAGGATaGAAGCGAGCCCGAGATGGA +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSQGARG*KRARDG
Trigger: TCCATCTCGGGCTCGCTTCCATCCTCTGGCTCCTTG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCATCTGAGTCGGGTCCTTaGCTTCTCTCAAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKASESGP*LLSSQT
Trigger: GGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAGA...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAACCCCTGCTCTGTCTTaGGGGAAGAGTTCCAATTCC +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKATPALS*GKSSNS
Trigger: GGAATTGGAACTCTTCCCCCAAGACAGAGCAGGGGT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTACTTTCCTCCAAGTGTaGCTAGGAGAAGAAACATCA +
Preference number: 4 (lower is better)
Translates to: KNSSEAIHALGIREAHKGTFLQV*LGEETS
Trigger: TGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGT...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCTGGAAAGTCAGGCTCTaGGGGAGTGGGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSWKVRL*GSGQLF
Trigger: GAAGAGCTGCCCACTCCCCCAGAGCCTGACTTTCCA...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR TCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCAGGTCCTCTTATGGGTaGACAGCTTGGGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSRSSYG*TAWGTV
Trigger: CACAGTCCCCCAAGCTGTTCACCCATAAGAGGACCT...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAAGTATGGCTAAGTCCTaGGGCCAGACAATGAGAGTG +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKASMAKS*GQTMRV
Trigger: CACTCTCATTGTCTGGCCTCAGGACTTAGCCATACT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCAAGAGCCAAGCTCTTTaGGTGACAGGGTATGGGGGC +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSKSQAL*VTGYGG
Trigger: GCCCCCATACCCTGTCACTCAAAGAGCTTGGCTCTT...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTGTTCCTTCTCCTTCTTaGCTGGCTTGGAGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLVPSPS*LAWSAA
Trigger: AGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAAC...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTAGGCAAGACAGACGATaGCCCACTGCAGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLRQDRR*PTADER
Trigger: TCTCTCATCTGCAGTGGGGCATCGTCTGTCTTGCCT...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTCATTTCAAAGTGCACTaGAGCCAAGCCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLHFKVH*SQARQA
Trigger: GGCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATG...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAAAAGTTCCCTGCAGATaGCTTGGGGAAGCCTACCAT +
Preference number: 4 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAKVPCR*LGEAYH
Trigger: ATGGTAGGCTTCCCCAAGGCATCTGCAGGGAACTTT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCTTTGCTAATTCAGGGTaGCCCAAGCTGCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITFANSG*PKLPKF
Trigger: GAACTTTGGCAGCTTGGGGCACCCTGAATTAGCAAA...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTTGTTGCGCGTGAACTaGATGGTGACTTCAATCTCG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLLLRVN*MVTSIS
Trigger: CGAGATTGAAGTCACCATCCAGTTCACGCGCAACAA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTGCTGAAGGGAGACCTTaGCTTGTCCTTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLAEGRP*LVLHGQ
Trigger: CTGTCCATGAAGGACAAGCCAAGGTCTCCCTTCAGC...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTCAAACCAGCTACTCTTaGCCTTTTCCTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLQTSYS*PFPPHW
Trigger: CCAGTGGGGAGGAAAAGGCCAAGAGTAGCTGGTTTG...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTGAGGGACCTACACATTaGAGGTGGTCAAGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLEGPTH*RWSRAR
Trigger: TCGAGCTCTTGACCACCTCCAATGTGTAGGTCCCTC...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTCAGCAGTGTTTATCCTaGGATCCTCCTATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLQQCLS*DPPIGV
Trigger: AACCCCAATAGGAGGATCCCAGGATAAACACTGCTG...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR TCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTAGTATGGCTAAGTCCTaGGGCCAGACAATGAGAGTG +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLSMAKS*GQTMRV
Trigger: CACTCTCATTGTCTGGCCTCAGGACTTAGCCATACT...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCCTTGTCCCAGATTACTaGATCAAGCTACAGTTCACC +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITLVPDY*IKLQFT
Trigger: GGTGAACTGTAGCTTGATGCAGTAATCTGGGACAAG...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTAAAGTTCCCTGCAGATaGCTTGGGGAAGCCTACCAT +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLKVPCR*LGEAYH
Trigger: ATGGTAGGCTTCCCCAAGGCATCTGCAGGGAACTTT...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTTCCCAGAGGAGCTCTTaGCTCCTCACTAAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLSQRSS*LLTKLL
Trigger: TAACAGCTTAGTGAGGAGGCAAGAGCTCCTCTGGGA...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTCTTCTCCTTCTTGCCTaGCTTGGAGTGCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLLLLLA*LGVQLV
Trigger: TACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAG...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTAACCCTGGGGACCAGTaGATACTTTTCTCAGATTTG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLNPGDQ*ILFSDL
Trigger: CAAATCTGAGAAAAGTATCCACTGGTCCCCAGGGTT...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCCAAAAGTTCAAACCCTaGAGCAACACAGAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SSCLLTKLLSILLQHLITQKFKP*SNTEFW
Trigger: CCAAAACTCTGTGTTGCTGCAGGGTTTGAACTTTTG...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTTACTTCATTTCAAAGTaGACTGCAGCCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLYFISK*TAAKPG
Trigger: GCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTA...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTATGGCTGACCATCCTTaGGGGATAATAAAGTATGTG +
Preference number: 4 (lower is better)
Translates to: NFPPSVARRRNINKDPGLMADHP*GIIKYV
Trigger: CACATACTTTATTATCCCCCAAGGATGGTCAGCCAT...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCTTGTTGCGCGTGAACTaGATGGTGACTTCAATCTCG +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSLLRVN*MVTSIS
Trigger: CGAGATTGAAGTCACCATCCAGTTCACGCGCAACAA...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTCATCAACAAGGACCCTaGGCTTCGATTCAAAAACTC +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLHQQGP*ASIQKL
Trigger: GAGTTTTTGAATCGAAGCCCAGGGTCCTTGTTGATG...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
3UTR CAA 72 bp TTTCCAAAAGTTCAAACCCTGCAGCAACACAGAGTTTaGGCATCTGGACAGGCAACAAGAATAGACATGGAG +
Preference number: 4 (lower is better)
Translates to: FPKVQTLQQHRV*ASGQATRIDME
Trigger: CTCCATGTCTATTCTTGTTGCCTGTCCAGATGCCAAAACTCTGTGTTGCTGCAGGGTTTGAACTTTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR GCA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTCAAAAGTTCAAACCCTaGAGCAACACAGAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: EMADHPWGIIKYVLATSLQKFKP*SNTEFW
Trigger: CCAAAACTCTGTGTTGCTGCAGGGTTTGAACTTTTG...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CCA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCAGTGGGCAGCTCTTCTaGACCAGAATGAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSSGQLF*TRMNRR
Trigger: TCTTCTATTCATTCTGGTCCAGAAGAGCTGCCCACT...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 90 bp GCCCCTACCGACCCGAGGAGCCCTGGGTCAGCCGCGCTCGCGCTCTaGTGGTTCGGTCCCAAGTCCAGAGGAACCCTGGGCTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: APTDPRSPGSAALAL*WFGPKSRGTLGSSH
Trigger: GTGGCTGGAGCCCAGGGTTCCTCTGGACTTGGGACCGAACCACCAGAGCGCGAGCGCGGCTGACCCAGGGCTCCTCGGGTCGGTAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 90 bp CCTACCGACCCGAGGAGCCCTGGGTCAGCCGCGCTCGCGCTCTGGTaGTTCGGTCCCAAGTCCAGAGGAACCCTGGGCTCCAGCCACACG +
Preference number: 5 (lower is better)
Translates to: PTDPRSPGSAALALW*FGPKSRGTLGSSHT
Trigger: CGTGTGGCTGGAGCCCAGGGTTCCTCTGGACTTGGGACCGAACCACCAGAGCGCGAGCGCGGCTGACCCAGGGCTCCTCGGGTCGGTAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 90 bp GAGAAGAGGGGAGCAGGCAGAACTCAGTCACGGGCCCAGGGAGCCTaGCTCCCGCCCGGTACCAGGCACTGCCCAGACCCCTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: EKRGAGRTQSRAQGA*LPPGTRHCPDPSLL
Trigger: GAGCAAGGAGGGGTCTGGGCAGTGCCTGGTACCGGGCGGGAGCCAGGCTCCCTGGGCCCGTGACTGAGTTCTGCCTGCTCCCCTCTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493523.2
CDS TCA 90 bp GAGGAGTTCGGCGCCAGGTCCCTGGTAGGCCAAGCTCCCGCTGGCTaGGGACAGGGTGCTGTCCGAGCCCAGCGAGGTGTTGGACTGGGT +
Preference number: 5 (lower is better)
Translates to: EEFGARSLVGQAPAG*GQGAVRAQRGVGLG
Trigger: ACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCAGCGGGAGCTTGGCCTACCAGGGACCTGGCGCCGAACTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS TCA 90 bp TGCCCCCTTCAGTGGACAGCCAGCTGCTACGGCTTGGTGAGCGGGTaGGGAGTTCGGCGCCAGGTCCCTGGTAGGCCAAGCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CPLQWTASCYGLVSG*GVRRQVPGRPSSRW
Trigger: CCAGCGGGAGCTTGGCCTACCAGGGACCTGGCGCCGAACTCCTCACCCGCTCACCAAGCCGTAGCAGCTGGCTGTCCACTGAAGGGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS GCA 90 bp CGCCAGGTCCCTGGTAGGCCAAGCTCCCGCTGGCTGAGGACAGGGTaGTGTCCGAGCCCAGCGAGGTGTTGGACTGGGTCAGGGACGACT +
Preference number: 5 (lower is better)
Translates to: RQVPGRPSSRWLRTG*CPSPARCWTGSGTT
Trigger: AGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCAGCGGGAGCTTGGCCTACCAGGGACCTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS GCA 90 bp CAGCCTCAGAGGAGGCCACTATGGGTGTGGCAACCTGGACTGGCTTaGCCTCTGGTAGCCGGGCCCCCTCCTCCTCTCCAGGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: QPQRRPLWVWQPGLA*PLVAGPPPPLQGGW
Trigger: CCAGCCACCCTGGAGAGGAGGAGGGGGCCCGGCTACCAGAGGGCAAGCCAGTCCAGGTTGCCACACCCATAGTGGCCTCCTCTGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS TCA 90 bp AGAGTCCCTGCCCCCTTCAGTGGACAGCCAGCTGCTACGGCTTGGTaGGCGGGTGAGGAGTTCGGCGCCAGGTCCCTGGTAGGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: RVPAPFSGQPAATAW*AGEEFGARSLVGQA
Trigger: AGCTTGGCCTACCAGGGACCTGGCGCCGAACTCCTCACCCGCTCACCAAGCCGTAGCAGCTGGCTGTCCACTGAAGGGGGCAGGGACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS GCA 90 bp GAAGCTCCTCGGGTGCCACCAGGTAGGGCGGCGGTTACCACACCATaGCTCCTCCCACCCCAGGACCTTCTCCTGGTGCTCAGAGACCTC +
Preference number: 5 (lower is better)
Translates to: EAPRVPPGRAAVTTP*LLPPQDLLLVLRDL
Trigger: GAGGTCTCTGAGCACCAGGAGAAGGTCCTGGGGTGGGAGGAGGCATGGTGTGGTAACCGCCGCCCTACCTGGTGGCACCCGAGGAGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493523.2
CDS GCA 90 bp GGTTCGGTCCCAAGTCCAGAGGAACCCTGGGCTCCAGCCACACGCTaGTCCCACCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GSVPSPEEPWAPATR*SHLFLLLLLLLLLL
Trigger: GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTGGGAGCAGCGTGTGGCTGGAGCCCAGGGTTCCTCTGGACTTGGGACCGAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 90 bp CTCCTCGGAGAACCGGGAAGAGACAGCTTGCAAGGAGCCAGAGGATaGAAGCGAGCCCGAGATGGAGCTGCGGTGCCGCACAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LLGEPGRDSLQGARG*KRARDGAAVPHRAL
Trigger: CAGGGCCCTGTGCGGCACCGCAGCTCCATCTCGGGCTCGCTTCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCGGTTCTCCGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp CTTCGGCGACCCAACTCGCTCCGACTTAGGCCTTGGTGGTGGTGGTaGAAGAGACCCATCCGGGGCTTGCGTTCCTCCTTCCGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LRRPNSLRLRPWWWW*KRPIRGLRSSFRAP
Trigger: GGGAGCCCGGAAGGAGGAACGCAAGCCCCGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000479196.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp TTCGCCTCGGGAGGACTCATCGTCCTGGCCCTCAGCAGCGCTCTCTaGGCCCGGCAGCCTCTCCCACACACTGATCACTTCTGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: FASGGLIVLALSSAL*ARQPLPHTDHFWGA
Trigger: AGCTCCCCAGAAGTGATCAGTGTGTGGGAGAGGCTGCCGGGCCCAGAGAGCGCTGCTGAGGGCCAGGACGATGAGTCCTCCCGAGGCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 90 bp TCCCGCTGGCTGAGGACAGGGTGCTGTCCGAGCCCAGCGAGGTGTTaGACTGGGTCAGGGACGACTTGCGCAGCTTGTTGCGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: SRWLRTGCCPSPARC*TGSGTTCAACCGGR
Trigger: TCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp GAGCTTCGGCGACCCAACTCGCTCCGACTTAGGCCTTGGTGGTGGTaGTGGAAGAGACCCATCCGGGGCTTGCGTTCCTCCTTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: ELRRPNSLRLRPWWW*WKRPIRGLRSSFRA
Trigger: AGCCCGGAAGGAGGAACGCAAGCCCCGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000479196.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp TCCCCCAGAGAGCTTCGGCGACCCAACTCGCTCCGACTTAGGCCTTaGTGGTGGTGGTGGAAGAGACCCATCCGGGGCTTGCGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPRELRRPNSLRLRP*WWWWKRPIRGLRSS
Trigger: GGAGGAACGCAAGCCCCGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGAAGCTCTCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000479196.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp CTCCAGCCCCACTCCTGCAGGGGCCAGGATCTCGCTCCTGGCCTCTaGACGCAGCCTGCTGGCAGCAAAGACGTTGAAGGTGTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: LQPHSCRGQDLAPGL*TQPAGSKDVEGVVP
Trigger: TGGGACAACACCTTCAACGTCTTTGCTGCCAGCAGGCTGCGTCCAGAGGCCAGGAGCGAGATCCTGGCCCCTGCAGGAGTGGGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS TCA 90 bp GGCATCTTCCTTGGAGACCCACACATCAGCCTGCTGGGAGGTGGCTaGCAAGGACCCAAGCCCCTCTCCTACTGGATCCTGGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GIFLGDPHISLLGGG*QGPKPLSYWILALG
Trigger: GCCCAGGGCCAGGATCCAGTAGGAGAGGGGCTTGGGTCCTTGTCAGCCACCTCCCAGCAGGCTGATGTGTGGGTCTCCAAGGAAGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS GCA 90 bp TCTGTGGAACGAGGCCCCTCCTCGGAGAACCGGGAAGAGACAGCTTaGAAGGAGCCAGAGGATGGAAGCGAGCCCGAGATGGAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SVERGPSSENREETA*KEPEDGSEPEMELR
Trigger: CCGCAGCTCCATCTCGGGCTCGCTTCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCGGTTCTCCGAGGAGGGGCCTCGTTCCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp CTGGCTGAGGACAGGGTGCTGTCCGAGCCCAGCGAGGTGTTGGACTaGGTCAGGGACGACTTGCGCAGCTTGTTGCGGAGGAAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LAEDRVLSEPSEVLD*VRDDLRSLLRRKKP
Trigger: AGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp CCCAGAGAGCTTCGGCGACCCAACTCGCTCCGACTTAGGCCTTGGTaGTGGTGGTGGAAGAGACCCATCCGGGGCTTGCGTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PRELRRPNSLRLRPW*WWWKRPIRGLRSSF
Trigger: GAAGGAGGAACGCAAGCCCCGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGAAGCTCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000479196.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp CTCTCCCTCCTCCTTGGTCTCCGGGGGACCGACAACCAGTGCACTTaGGGAGGCATCTTCTCCCTCTGTCTCCGGCCCCCTGTTACTCAG +
Preference number: 5 (lower is better)
Translates to: LSLLLGLRGTDNQCT*GGIFSLCLRPPVTQ
Trigger: CTGAGTAACAGGGGGCCGGAGACAGAGGGAGAAGATGCCTCCCCAAGTGCACTGGTTGTCGGTCCCCCGGAGACCAAGGAGGAGGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGCAACCTGGACTGGCTaGCCCTCTGGTAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVATWTG*PSGSRA
Trigger: GGCCCGGCTACCAGAGGGCAAGCCAGTCCAGGTTGC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GTGAGGCTGAAGAGGCTGGTTGCCCGTAACTCACAGACAAACAGGCAGCGTGGTGCAACCTGGACTGGCTaGCCCTCTGGTAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: VRLKRLVARNSQTNRQRGATWTG*PSGSRA
Trigger: GGCCCGGCTACCAGAGGGCAAGCCAGTCCAGGTTGC...ACCACGCTGCCTGTTTGTCTGTGAGTTACGGGCAACCAGCCTCTTCAGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS TCA 90 bp TCCCAAGGCCAGGCATCATCAGCTGTCTCGACGTCAGGGCAAAGCTaGTTTTCGCCTCGGGAGGACTCATCGTCCTGGCCCTCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: SQGQASSAVSTSGQS*FSPREDSSSWPSAA
Trigger: CGCTGCTGAGGGCCAGGACGATGAGTCCTCCCGAGGCGAAAATCAGCTTTGCCCTGACGTCGAGACAGCTGATGATGCCTGGCCTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS GCA 90 bp CCAGCGAGGTGTTGGACTGGGTCAGGGACGACTTGCGCAGCTTGTTaGGGAGGAAGAAGCCTTTGGCTTTGCCCATCTTGCCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: PARCWTGSGTTCAAC*GGRSLWLCPSCPGC
Trigger: GCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp CTGGATGGTGACTTCAATCTCGCCGCGTTCCTTCTCCTTCTTGCCTaGCTTGGAGTGCAGCTTGTACCACTGCGTGTGCTGGGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: LDGDFNLAAFLLLLA*LGVQLVPLRVLGAA
Trigger: GGCCGCGCCCAGCACACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTCACCATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS CCA 90 bp AGTGGCAGCAGCGGGGGAGGCGGCTGGGTTTCTGAGTCGGGTCCTTaGCTTCTCTCAAGCCAAACCAGCTACTCTTGGCCTTTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SGSSGGGGWVSESGP*LLSSQTSYSWPFPP
Trigger: GGGAGGAAAAGGCCAAGAGTAGCTGGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAGAAACCCAGCCGCCTCCCCCGCTGCTGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479196.1
CDS-3UTR CAA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCTGGCGCTCAGGTTGTaGCGCGTGAACTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHLALRL*RVNWMV
Trigger: CACCATCCAGTTCACGCGCAACAACCTGAGCGCCAG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGTGGGTCAGGGACGACTaGCGCAGCTTGTTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEWVRDD*RSLLRR
Trigger: CCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCA...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACGAGCCCAGCGAGGTGTaGGACTGGGTCAGGGACGAC +
Preference number: 5 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDEPSEV*DWVRDD
Trigger: GTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTC...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGCCTCTGAGCTGCTGTaGCTACGACTGCCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVASELL*LRLPLG
Trigger: GCCCAGAGGCAGTCGTAGCAACAGCAGCTCAGAGGC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACGCTGGCCCAGCAGGGTaGCAGAGGAGCAGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDAGPAG*QRSSCQ
Trigger: CTGACAGCTGCTCCTCTGCAACCCTGCTGGGCCAGC...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS TCA 90 bp CCACTCGCATCTGGTTGGCCTCATCGCTGTAGGTCCTCTTATGGGTaGACAGCTTGGGGGACTGTGCAGAGTCCCTGCCCCCTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: PLASGWPHRCRSSYG*TAWGTVQSPCPLQW
Trigger: CCACTGAAGGGGGCAGGGACTCTGCACAGTCCCCCAAGCTGTTCACCCATAAGAGGACCTACAGCGATGAGGCCAACCAGATGCGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS GCA 90 bp TGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATCTTGCCCAGGCTaGCCAGGTCAGGATCCTCTATGGCGCTGCTTGGGAGGATGGCAG +
Preference number: 5 (lower is better)
Translates to: CCGGRSLWLCPSCPG*PGQDPLWRCLGGWQ
Trigger: CTGCCATCCTCCCAAGCAGCGCCATAGAGGATCCTGACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS GCA 90 bp TGCGCAGCTTGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATCTTaGCCAGGCTGCCCAGGTCAGGATCCTCTATGGCGCTGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: CAACCGGRSLWLCPS*PGCPGQDPLWRCLG
Trigger: TCCCAAGCAGCGCCATAGAGGATCCTGACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS GCA 90 bp TGCTGTCCGAGCCCAGCGAGGTGTTGGACTGGGTCAGGGACGACTTaGGCAGCTTGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATCT +
Preference number: 5 (lower is better)
Translates to: CCPSPARCWTGSGTT*AACCGGRSLWLCPS
Trigger: AGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 90 bp TCAAGGCATCTTCCTTGGAGACCCACACATCAGCCTGCTGGGAGGTaGCTGACAAGGACCCAAGCCCCTCTCCTACTGGATCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: SRHLPWRPTHQPAGR*LTRTQAPLLLDPGP
Trigger: AGGGCCAGGATCCAGTAGGAGAGGGGCTTGGGTCCTTGTCAGCCACCTCCCAGCAGGCTGATGTGTGGGTCTCCAAGGAAGATGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCGGAGGAAGAAGCCTTaGGCTTTGCCCATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHRRKKP*ALPILP
Trigger: GGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGGAGGGACCTACACATaGGAGGTGGTCAAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHGGTYT*EVVKSS
Trigger: CGAGCTCTTGACCACCTCCAATGTGTAGGTCCCTCC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACGACTTGCGCAGCTTGTaGCGGAGGAAGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHDLRSL*RRKKPL
Trigger: CAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTC...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGCCGGGAAGAGACAGCTaGCAAGGAGCCAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGPGRDS*QGARGW
Trigger: CCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCGG...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCCAAACCAGCTACTCTaGGCCTTTTCCTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHPNQLL*AFSSPL
Trigger: CAGTGGGGAGGAAAAGGCCAAGAGTAGCTGGTTTGG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS TCA 90 bp GGAAAGTCAGGCTCTGGGGGAGTGGGCAGCTCTTCTGGACCAGAATaGATAGAAGATTCCCTCGACCCTGGCGGGGATGCAGATGAGAGG +
Preference number: 5 (lower is better)
Translates to: GKSGSGGVGSSSGPE*IEDSLDPGGDADER
Trigger: CCTCTCATCTGCATCCCCGCCAGGGTCGAGGGAATCTTCTATTCATTCTGGTCCAGAAGAGCTGCCCACTCCCCCAGAGCCTGACTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS GCA 90 bp ACTTCAATCTCGCCGCGTTCCTTCTCCTTCTTGCCTGGCTTGGAGTaGAGCTTGTACCACCAGGTCTCATGCTCCAGCCTCCTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: TSISPRSFSFLPGLE*SLYHQVSCSSLLPG
Trigger: ACCAGGCAGGAGGCTGGAGCATGAGACCTGGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475951.1
CDS GCA 90 bp ACTTCTGGGGAGCTAAATAGAGATGTCCCACTGTCTGCCGGACTCTaGCCTGCTTCCACTTCCGGGGCTGGCAGTTCCCTGTCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TSGELNRDVPLSAGL*PASTSGAGSSLSGS
Trigger: AGAACCAGACAGGGAACTGCCAGCCCCGGAAGTGGAAGCAGGGCAGAGTCCGGCAGACAGTGGGACATCTCTATTTAGCTCCCCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp CACTCGCCCCACAAACAGCTCCAGACTGAAGCAGACTCAGGACATGGCAGAGACCGTTCCTTCTCCTTCTaGCCTGGCTTGGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: HSPHKQLQTEADSGHGRDRSFSF*PGLECS
Trigger: GCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACG...GTCTCTGCCATGTCCTGAGTCTGCTTCAGTCTGGAGCTGTTTGTGGGGCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTCCTCTATGGCGCTGCTaGGGAGGATGGCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: KNSSEAIHALGIREAHKGPLWRC*GGWQRQ
Trigger: CTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGG...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGGACTTGCGCAGCTTGTaGCGGAGGAAGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEDLRSL*RRKKPL
Trigger: CAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTC...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGTTATGGGTGAACAGCTaGGGGGACTGTGCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVLWVNS*GDCAES
Trigger: GGACTCTGCACAGTCCCCCAAGCTGTTCACCCATAA...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTGCCTCTGAGCTGCTGTaGCTACGACTGCCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: KNSSEAIHALGIREAHKGASELL*LRLPLG
Trigger: GCCCAGAGGCAGTCGTAGCAACAGCAGCTCAGAGGC...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCCAGATGTGACTGTTTaGAGCTTCTCCAGCCCACTG +
Preference number: 5 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHPDVTV*SFSSPL
Trigger: CAGTGGGCTGGAGAAGCTCAAAACAGTCACATCTGG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGAAGGGGATGGGGCTTaGGCTGTGGGAAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEEGDGA*AVGRNG
Trigger: GCCATTTCTTCCCACAGCCAAAGCCCCATCCCCTTC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGGAGGGACCTACACATaGGAGGTGGTCAAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEEGGTYT*EVVKSS
Trigger: CGAGCTCTTGACCACCTCCAATGTGTAGGTCCCTCC...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGATCCTCCTATTGGGGTaGAGGGAGGGGAAGACAGCA +
Preference number: 5 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEILLLG*REGKTA
Trigger: TGCTGTCTTCCCCTCCCTCAACCCCAATAGGAGGAT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAACGACAACCAGTGCACTaGGGGAGGCATCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEERQPVH*GRHLLP
Trigger: AGGGAGAAGATGCCTCCCCAAGTGCACTGGTTGTCG...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTTTCTCTCCCTCCTCCTaGGTCTCCGGGGGACCGACA +
Preference number: 5 (lower is better)
Translates to: KNSSEAIHALGIREAHKGFSPSS*VSGGPT
Trigger: TGTCGGTCCCCCGGAGACCAAGGAGGAGGGAGAGAA...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGGAAGAGCCAAGCTCTTaGAGTGACAGGGTATGGGGG +
Preference number: 5 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEEEPSS*SDRVWG
Trigger: CCCCCATACCCTGTCACTCAAAGAGCTTGGCTCTTC...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS TCA 90 bp CTCCCCGAAAGACTAGTGAGGCTGTCTCAGCTGCAGGAGAAATGGTaGCCACATCCCAAGGCCAGGCATCATCAGCTGTCTCGACGTCAG +
Preference number: 5 (lower is better)
Translates to: LPERLVRLSQLQEKW*PHPKARHHQLSRRQ
Trigger: CTGACGTCGAGACAGCTGATGATGCCTGGCCTTGGGATGTGGTCACCATTTCTCCTGCAGCTGAGACAGCCTCACTAGTCTTTCGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 90 bp CTGGATGGTGACTTCAATCTCGCCGCGTTCCTTCTCCTTCTTGCCTaGCTTGGAGTGCAGCTTGTACCACCAGGTCTCATGCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LDGDFNLAAFLLLLA*LGVQLVPPGLMLQP
Trigger: AGGCTGGAGCATGAGACCTGGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTCACCATCCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475951.1
CDS CCA 90 bp CTGGATGGTGACTTCAATCTCGCCGCGTTCCTTCTCCTTCTTGCCTaGCTTGGAGTGCAGCTTGTACCACCTGTGAGAAGAGGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LDGDFNLAAFLLLLA*LGVQLVPPVRRGEQ
Trigger: CTGCTCCCCTCTTCTCACAGGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTCACCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493523.2
CDS-3UTR CAA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTGGCTTGGAGTGCAGCTaGTACCACTGCGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: KNSSEAIHALGIREAHKGGLECS*YHCVCW
Trigger: CCAGCACACGCAGTGGTACAAGCTGCACTCCAAGCC...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp ACGTGTCTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAATCCTTCTTGCCTGGCTaGGAGTGCAGCTTGTACCAC +
Preference number: 5 (lower is better)
Translates to: TCLPEAFQKQAHRPSPEESFLPG*ECSLYH
Trigger: GTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGA...TTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAGACACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGCTGGCGCTCAGGTTGTaGCGCGTGAACTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMLALRL*RVNWMV
Trigger: CACCATCCAGTTCACGCGCAACAACCTGAGCGCCAG...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGATACTGGCGCTCAGGTaGTTGCGCGTGAACTGGATG +
Preference number: 5 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGILALR*LRVNWM
Trigger: CATCCAGTTCACGCGCAACAACCTGAGCGCCAGTAT...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGAAGGGAGACCTTGGCTaGTCCTTCATGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEKGDLG*SFMDRS
Trigger: TGACCTGTCCATGAAGGACAAGCCAAGGTCTCCCTT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGTCCCAGAGATCTTGTCCCTGATCTaGCTGAAGGGAGACCTTGGC +
Preference number: 5 (lower is better)
Translates to: AFQKQAHRPSPEEVVVPEILSLI*LKGDLG
Trigger: GCCAAGGTCTCCCTTCAGCAAGATCAGGGACAAGAT...CTCTGGGACCACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCCTCTATGGCGCTGCTaGGGAGGATGGCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GQRTDTSFQSALQPSQASPLWRC*GGWQRQ
Trigger: CTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGTTGGCTTTGCCCATCTaGCCCAGGCTGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMLALPI*PRLPRS
Trigger: TGACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAA...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCTGGGTCAGGGACGACTaGCGCAGCTTGTTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GQRTDTSFQSALQPSQASWVRDD*RSLLRR
Trigger: CCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCA...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGTTATGGGTGAACAGCTaGGGGGACTGTGCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGLWVNS*GDCAES
Trigger: GGACTCTGCACAGTCCCCCAAGCTGTTCACCCATAA...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCCTGAGAGAGCCATCCCTATGTATTCAACAGGTGGGAGGGGGACGCCACACCCAAAGACACACAAGTaGTGCACAGAACCTGATGCC +
Preference number: 5 (lower is better)
Translates to: GPERAIPMYSTGGRGTPHPKTHK*CTEPDA
Trigger: GGCATCAGGTTCTGTGCACAACTTGTGTGTCTTTGG...GTGTGGCGTCCCCCTCCCACCTGTTGAATACATAGGGATGGCTCTCTCAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTCCTGGGATCCTCCTATaGGGGTTGAGGGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: KNSSEAIHALGIREAHKGPGILL*GLREGK
Trigger: CTTCCCCTCCCTCAACCCCAATAGGAGGATCCCAGG...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGTTCAAGGCATCTTCCTaGGAGACCCACACATCAGCC +
Preference number: 5 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVFKASS*ETHTSA
Trigger: GGCTGATGTGTGGGTCTCCAAGGAAGATGCCTTGAA...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 90 bp CCAGGCTGCCCAGGTCAGGATCCTCTATGGCGCTGCTTGGGAGGATaGCAGAGGCAGATTCCAGATCATACTTCTTCTTGCCCTTCATCT +
Preference number: 5 (lower is better)
Translates to: PGCPGQDPLWRCLGG*QRQIPDHTSSCPSS
Trigger: AGATGAAGGGCAAGAAGAAGTATGATCTGGAATCTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATCCTGACCTGGGCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS-3UTR CAA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCTTGGCTTTGCCCATCTaGCCCAGGCTGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GQRTDTSFQSALQPSQASLALPI*PRLPRS
Trigger: TGACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAA...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp AAAAACTCCTCTGAAGCCATCCATGCCCTGGGCATTAGGGAGGCCCACAAAGGTGACGACTTGCGCAGCTaGTTGCGGAGGAAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: KNSSEAIHALGIREAHKGDDLRS*LRRKKP
Trigger: AGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTC...ACCTTTGTGGGCCTCCCTAATGCCCAGGGCATGGATGGCTTCAGAGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCAGACCCATCCGGGGCTaGCGTTCCTCCTTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: SSCLLTKLLSILLQHLITRPIRG*RSSFRA
Trigger: AGCCCGGAAGGAGGAACGCAAGCCCCGGATGGGTCT...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CTGCCTGAGGCCTTCCAAAAGCAAGCCCACAGGCCCTCTCCTGAAGAAGTGGTGGAGGTGAGGAACGGGTaGGTAAGACCCAATAATCCA +
Preference number: 5 (lower is better)
Translates to: LPEAFQKQAHRPSPEEVVEVRNG*VRPNNP
Trigger: TGGATTATTGGGTCTTACCAACCCGTTCCTCACCTC...CACCACTTCTTCAGGAGAGGGCCTGTGGGCTTGCTTTTGGAAGGCCTCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAAGACCCATCCGGGGCTaGCGTTCCTCCTTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKARPIRG*RSSFRA
Trigger: AGCCCGGAAGGAGGAACGCAAGCCCCGGATGGGTCT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCATACTGGCGCTCAGGTaGTTGCGCGTGAACTGGATG +
Preference number: 5 (lower is better)
Translates to: GQRTDTSFQSALQPSQASILALR*LRVNWM
Trigger: CATCCAGTTCACGCGCAACAACCTGAGCGCCAGTAT...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp ACATGGAGGCTTGATCCCCAAATCATAAGCAGTCCCAAGCCCCAGCCTGGAGGGTTCTTGCCCTTCATCTaGTCCCTGATCTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TWRLDPQIISSPKPQPGGFLPFI*SLILLK
Trigger: CTTCAGCAAGATCAGGGACAAGATGAAGGGCAAGAA...CCCTCCAGGCTGGGGCTTGGGACTGCTTATGATTTGGGGATCAAGCCTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCACCCCTGCTCTGTCTaGGGGGAAGAGTTCCAATTC +
Preference number: 5 (lower is better)
Translates to: GQRTDTSFQSALQPSQASHPCSV*GEEFQF
Trigger: GAATTGGAACTCTTCCCCCAAGACAGAGCAGGGGTG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp CGTGGTCATTGTCCCAGTAATACTAGAAGCCCCTCCAGGGACTGGAGGGAAATGTTCCCTGCAGATGCCTaGGGGAAGCCTACCATGTTT +
Preference number: 5 (lower is better)
Translates to: RGHCPSNTRSPSRDWREMFPADA*GKPTMF
Trigger: AAACATGGTAGGCTTCCCCAAGGCATCTGCAGGGAA...CATTTCCCTCCAGTCCCTGGAGGGGCTTCTAGTATTACTGGGACAATGACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCGAGCCCAGCGAGGTGTaGGACTGGGTCAGGGACGAC +
Preference number: 5 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSEPSEV*DWVRDD
Trigger: GTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTC...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GGCCAAAGGACAGATACTTCATTTCAAAGTGCACTGCAGCCAAGCCAGGCAAGCCCAAAGACACACAAGTaGTGCACAGAACCTGATGCC +
Preference number: 5 (lower is better)
Translates to: GQRTDTSFQSALQPSQASPKTHK*CTEPDA
Trigger: GGCATCAGGTTCTGTGCACAACTTGTGTGTCTTTGG...GCTTGCCTGGCTTGGCTGCAGTGCACTTTGAAATGAAGTATCTGTCCTTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCTCCTCGAAGAAGGGGTaGCTCTGCAAAGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SSCLLTKLLSILLQHLITSSKKG*LCKEVR
Trigger: CCTCACCTCTTTGCAGAGCAACCCCTTCTTCGAGGA...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp AGCTCTTGCCTCCTCACTAAGCTGTTAAGTATCCTTCTTCAGCACCTCATCACCAAGACGTTGAAGGTGTaGTCCCACTCAGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SSCLLTKLLSILLQHLITKTLKV*SHSGRA
Trigger: AGCCCTGCCTGAGTGGGACAACACCTTCAACGTCTT...GGTGATGAGGTGCTGAAGAAGGATACTTAACAGCTTAGTGAGGAGGCAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCGGCTTGGAGTGCAGCTaGTACCACTGCGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSGLECS*YHCVCW
Trigger: CCAGCACACGCAGTGGTACAAGCTGCACTCCAAGCC...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp GAAATGGCTGACCATCCTTGGGGGATAATAAAGTATGTGCTAGCAACCAGTCTTGACGACTTGCGCAGCTaGTTGCGGAGGAAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: EMADHPWGIIKYVLATSLDDLRS*LRRKKP
Trigger: AGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTC...AAGACTGGTTGCTAGCACATACTTTATTATCCCCCAAGGATGGTCAGCCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACCAAACCAGCTACTCTaGGCCTTTTCCTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAPNQLL*AFSSPL
Trigger: CAGTGGGGAGGAAAAGGCCAAGAGTAGCTGGTTTGG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAATCCTCCTATTGGGGTaGAGGGAGGGGAAGACAGCA +
Preference number: 5 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAILLLG*REGKTA
Trigger: TGCTGTCTTCCCCTCCCTCAACCCCAATAGGAGGAT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCCTGGGATCCTCCTATaGGGGTTGAGGGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSPGILL*GLREGK
Trigger: CTTCCCCTCCCTCAACCCCAATAGGAGGATCCCAGG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAAAGGGAGACCTTGGCTaGTCCTTCATGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAKGDLG*SFMDRS
Trigger: TGACCTGTCCATGAAGGACAAGCCAAGGTCTCCCTT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCAATCTTGTCCCTGATCTaGCTGAAGGGAGACCTTGGC +
Preference number: 5 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAILSLI*LKGDLG
Trigger: GCCAAGGTCTCCCTTCAGCAAGATCAGGGACAAGAT...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACCAGATGTGACTGTTTaGAGCTTCTCCAGCCCACTG +
Preference number: 5 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAPDVTV*SFSSPL
Trigger: CAGTGGGCTGGAGAAGCTCAAAACAGTCACATCTGG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCGAAGGGGATGGGGCTTaGGCTGTGGGAAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSEGDGA*AVGRNG
Trigger: GCCATTTCTTCCCACAGCCAAAGCCCCATCCCCTTC...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCATTCCCTGCAGATGCCTaGGGGAAGCCTACCATGTTT +
Preference number: 5 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKAFPADA*GKPTMF
Trigger: AAACATGGTAGGCTTCCCCAAGGCATCTGCAGGGAA...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCAAAGGCACTGGCAGCAAAGACGTaGAAGGTGTTGTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: WMGGQQRLFPKYRCLPKALAAKT*KVLSHS
Trigger: TGAGTGGGACAACACCTTCAACGTCTTTGCTGCCAG...TGCCTTTGGGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS-3UTR CAA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCTCCTTCTTGCCTGGCTaGGAGTGCAGCTTGTACCAC +
Preference number: 5 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSSFLPG*ECSLYH
Trigger: GTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGA...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp AACTTTCCTCCAAGTGTGGCTAGGAGAAGAAACATCAACAAGGACCCTGGGCTTTTCTTGCCCTTCATCTaGTCCCTGATCTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: NFPPSVARRRNINKDPGLFLPFI*SLILLK
Trigger: CTTCAGCAAGATCAGGGACAAGATGAAGGGCAAGAA...AAGCCCAGGGTCCTTGTTGATGTTTCTTCTCCTAGCCACACTTGGAGGAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCCACCCCTGCTCTGTCTaGGGGGAAGAGTTCCAATTC +
Preference number: 5 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSHPCSV*GEEFQF
Trigger: GAATTGGAACTCTTCCCCCAAGACAGAGCAGGGGTG...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS-3UTR CAA 90 bp TTAATGGATGGATGGGAGGACAACAAAGGCTTTTTCCTAAGTATAGGTGTCTCCAAGACAGCAGGAAGGTaGAGGGAGCAGCAACTTGGC +
Preference number: 5 (lower is better)
Translates to: LMDGWEDNKGFFLSIGVSKTAGR*REQQLG
Trigger: GCCAAGTTGCTGCTCCCTCAACCTTCCTGCTGTCTT...GGAGACACCTATACTTAGGAAAAAGCCTTTGTTGTCCTCCCATCCATCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS CCA 72 bp GGAGGGCAGGCCAGCCCCTACCGACCCGAGGAGCCCTaGGTCAGCCGCGCTCGCGCTCTGGTGGTTCGGTCC +
Preference number: 6 (lower is better)
Translates to: GGQASPYRPEEP*VSRARALVVRS
Trigger: GGACCGAACCACCAGAGCGCGAGCGCGGCTGACCCAGGGCTCCTCGGGTCGGTAGGGGCTGGCCTGCCCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS GCA 72 bp GTGCAGCTTGTACCACTGCGTGTGCTGGGCGCGGCCTaGGCCGAAGACCTCGTCCAGCGCCACCGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: VQLVPLRVLGAA*AEDLVQRHRGL
Trigger: CAGGCCACGGTGGCGCTGGACGAGGTCTTCGGCGCAGGCCGCGCCCAGCACACGCAGTGGTACAAGCTGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS CCA 72 bp GACCCGAGGAGCCCTGGGTCAGCCGCGCTCGCGCTCTaGTGGTTCGGTCCCAAGTCCAGAGGAACCCTGGGC +
Preference number: 6 (lower is better)
Translates to: DPRSPGSAALAL*WFGPKSRGTLG
Trigger: GCCCAGGGTTCCTCTGGACTTGGGACCGAACCACCAGAGCGCGAGCGCGGCTGACCCAGGGCTCCTCGGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS TCA 72 bp AGGTCTGGCCGAGCCGGTGCAGACCCCAGGACCTGGTaGCAAACCCGGCCGCGGCAGAAGGCGGTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RSGRAGADPRTW*QTRPRQKAVRN
Trigger: GTTCCTGACCGCCTTCTGCCGCGGCCGGGTTTGTCACCAGGTCCTGGGGTCTGCACCGGCTCGGCCAGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS GCA 72 bp CCACTGCTCAGGGCTATGCTCAGACTGGAGCGGGACTaGTTCCTGTCGGGGCTGCCCTCCACAGGGGCGGCA +
Preference number: 6 (lower is better)
Translates to: PLLRAMLRLERD*FLSGLPSTGAA
Trigger: TGCCGCCCCTGTGGAGGGCAGCCCCGACAGGAAGCAGTCCCGCTCCAGTCTGAGCATAGCCCTGAGCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000482554.5
ENST00000486777.7
ENST00000493523.2
CDS GCA 72 bp CGGGTGCCACCAGGTAGGGCGGCGGTTACCACACCATaGCTCCTCCCACCCCAGGACCTTCTCCTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: RVPPGRAAVTTP*LLPPQDLLLVL
Trigger: GAGCACCAGGAGAAGGTCCTGGGGTGGGAGGAGGCATGGTGTGGTAACCGCCGCCCTACCTGGTGGCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493523.2
CDS TCA 72 bp CAGTGGACAGCCAGCTGCTACGGCTTGGTGAGCGGGTaGGGAGTTCGGCGCCAGGTCCCTGGTAGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: QWTASCYGLVSG*GVRRQVPGRPS
Trigger: GCTTGGCCTACCAGGGACCTGGCGCCGAACTCCTCACCCGCTCACCAAGCCGTAGCAGCTGGCTGTCCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS TCA 72 bp GCCCCCTTCAGTGGACAGCCAGCTGCTACGGCTTGGTaGGCGGGTGAGGAGTTCGGCGCCAGGTCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: APFSGQPAATAW*AGEEFGARSLV
Trigger: TACCAGGGACCTGGCGCCGAACTCCTCACCCGCTCACCAAGCCGTAGCAGCTGGCTGTCCACTGAAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS GCA 72 bp CCTGGTAGGCCAAGCTCCCGCTGGCTGAGGACAGGGTaGTGTCCGAGCCCAGCGAGGTGTTGGACTGGGTCA +
Preference number: 6 (lower is better)
Translates to: PGRPSSRWLRTG*CPSPARCWTGS
Trigger: TGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCAGCGGGAGCTTGGCCTACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 72 bp CCTCCTTGGTCTCCGGGGGACCGACAACCAGTGCACTaGGGGAGGCATCTTCTCCCTCTGTCTCCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: PPWSPGDRQPVH*GRHLLPLSPAP
Trigger: GGGGGCCGGAGACAGAGGGAGAAGATGCCTCCCCAAGTGCACTGGTTGTCGGTCCCCCGGAGACCAAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CAA 90 bp CTCCCGCTGGCTGAGGACAGGGTGCTGTCCGAGCCCAGCGAGGTGTaGGACTGGGTCAGGGACGACTTGCGCAGCTTGTTGCGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LPLAEDRVLSEPSEV*DWVRDDLRSLLRRK
Trigger: CTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGCCAGCGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS TCA 72 bp CACTGCGGCCTTCTCCTCCTCCTCCTCCTGGGATCTTaGGGGTGTGAAGAGGCGCGGTGGCTTGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: HCGLLLLLLLGS*GCEEARWLGRW
Trigger: CCACCTCCCAAGCCACCGCGCCTCTTCACACCCTCAAGATCCCAGGAGGAGGAGGAGGAGAAGGCCGCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS GCA 72 bp CCAAGTCCAGAGGAACCCTGGGCTCCAGCCACACGCTaGTCCCACCTCTTCCTCCTCCTCCTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: PSPEEPWAPATR*SHLFLLLLLLL
Trigger: GAGGAGGAGGAGGAGGAGGAGGAAGAGGTGGGAGCAGCGTGTGGCTGGAGCCCAGGGTTCCTCTGGACTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 72 bp GACAGGGTGCTGTCCGAGCCCAGCGAGGTGTTGGACTaGGTCAGGGACGACTTGCGCAGCTTGTTGCGGAGG +
Preference number: 6 (lower is better)
Translates to: DRVLSEPSEVLD*VRDDLRSLLRR
Trigger: CCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp GCTTCTCCAGCCCACTGCTCAGGGCTATGCTCAGACTaGAGCGGGACTGCTTCCTGTCGGGGCTGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: ASPAHCSGLCSD*SGTASCRGCPP
Trigger: TGGAGGGCAGCCCCGACAGGAAGCAGTCCCGCTCCAGTCTGAGCATAGCCCTGAGCAGTGGGCTGGAGAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000482554.5
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp GGAGGACTCATCGTCCTGGCCCTCAGCAGCGCTCTCTaGGCCCGGCAGCCTCTCCCACACACTGATCACTTC +
Preference number: 6 (lower is better)
Translates to: GGLIVLALSSAL*ARQPLPHTDHF
Trigger: GAAGTGATCAGTGTGTGGGAGAGGCTGCCGGGCCCAGAGAGCGCTGCTGAGGGCCAGGACGATGAGTCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 72 bp CTCCTTGGTCTCCGGGGGACCGACAACCAGTGCACTTaGGGAGGCATCTTCTCCCTCTGTCTCCGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: LLGLRGTDNQCT*GGIFSLCLRPP
Trigger: AGGGGGCCGGAGACAGAGGGAGAAGATGCCTCCCCAAGTGCACTGGTTGTCGGTCCCCCGGAGACCAAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS GCA 72 bp TCGCCGCGTTCCTTCTCCTTCTTGCCTGGCTTGGAGTaGAGCTTGTACCACTGCGTGTGCTGGGCGCGGCCT +
Preference number: 6 (lower is better)
Translates to: SPRSFSFLPGLE*SLYHCVCWARP
Trigger: AGGCCGCGCCCAGCACACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS GCA 72 bp CGAGGCCCCTCCTCGGAGAACCGGGAAGAGACAGCTTaGAAGGAGCCAGAGGATGGAAGCGAGCCCGAGATG +
Preference number: 6 (lower is better)
Translates to: RGPSSENREETA*KEPEDGSEPEM
Trigger: CATCTCGGGCTCGCTTCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCGGTTCTCCGAGGAGGGGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS GCA 72 bp TCCCTCCTCCTTGGTCTCCGGGGGACCGACAACCAGTaGACTTGGGGAGGCATCTTCTCCCTCTGTCTCCGG +
Preference number: 6 (lower is better)
Translates to: SLLLGLRGTDNQ*TWGGIFSLCLR
Trigger: CCGGAGACAGAGGGAGAAGATGCCTCCCCAAGTGCACTGGTTGTCGGTCCCCCGGAGACCAAGGAGGAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 72 bp CTGAGGACAGGGTGCTGTCCGAGCCCAGCGAGGTGTTaGACTGGGTCAGGGACGACTTGCGCAGCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: LRTGCCPSPARC*TGSGTTCAACC
Trigger: GCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp GAACCGGGAAGAGACAGCTTGCAAGGAGCCAGAGGATaGAAGCGAGCCCGAGATGGAGCTGCGGTGCCGCAC +
Preference number: 6 (lower is better)
Translates to: EPGRDSLQGARG*KRARDGAAVPH
Trigger: GTGCGGCACCGCAGCTCCATCTCGGGCTCGCTTCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp CGACCCAACTCGCTCCGACTTAGGCCTTGGTGGTGGTaGTGGAAGAGACCCATCCGGGGCTTGCGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: RPNSLRLRPWWW*WKRPIRGLRSS
Trigger: GGAGGAACGCAAGCCCCGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000479196.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp CTTCGGCGACCCAACTCGCTCCGACTTAGGCCTTGGTaGTGGTGGTGGAAGAGACCCATCCGGGGCTTGCGT +
Preference number: 6 (lower is better)
Translates to: LRRPNSLRLRPW*WWWKRPIRGLR
Trigger: ACGCAAGCCCCGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000479196.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp GAGCTTCGGCGACCCAACTCGCTCCGACTTAGGCCTTaGTGGTGGTGGTGGAAGAGACCCATCCGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: ELRRPNSLRLRP*WWWWKRPIRGL
Trigger: CAAGCCCCGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGGTCGCCGAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000479196.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp CACTCCTGCAGGGGCCAGGATCTCGCTCCTGGCCTCTaGACGCAGCCTGCTGGCAGCAAAGACGTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: HSCRGQDLAPGL*TQPAGSKDVEG
Trigger: ACCTTCAACGTCTTTGCTGCCAGCAGGCTGCGTCCAGAGGCCAGGAGCGAGATCCTGGCCCCTGCAGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479196.1
ENST00000486777.7
CDS CAA 72 bp GCTGAGGACAGGGTGCTGTCCGAGCCCAGCGAGGTGTaGGACTGGGTCAGGGACGACTTGCGCAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: AEDRVLSEPSEV*DWVRDDLRSLL
Trigger: CAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCACCCTGTCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 72 bp GGACGCAGCCTGCTGGCAGCAAAGACGTTGAAGGTGTaGTCCCACTCAGGCAGGGCTTTCCCAGGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: GRSLLAAKTLKV*SHSGRAFPGEA
Trigger: GGCCTCCCCTGGGAAAGCCCTGCCTGAGTGGGACAACACCTTCAACGTCTTTGCTGCCAGCAGGCTGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479196.1
ENST00000486777.7
CDS CAA 90 bp ATCTGTGGAACGAGGCCCCTCCTCGGAGAACCGGGAAGAGACAGCTaGCAAGGAGCCAGAGGATGGAAGCGAGCCCGAGATGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: ICGTRPLLGEPGRDS*QGARGWKRARDGAA
Trigger: CGCAGCTCCATCTCGGGCTCGCTTCCATCCTCTGGCTCCTTGCAAGCTGTCTCTTCCCGGTTCTCCGAGGAGGGGCCTCGTTCCACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS CAA 90 bp TGGCATCCTCCACTAGCTCTTCCAGGCCAGGCTGGCCCAGCAGGGTaGCAGAGGAGCAGCTGTCAGACTCCTCCGACTCACGCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: WHPPLALPGQAGPAG*QRSSCQTPPTHASL
Trigger: GAGAGAAGCGTGAGTCGGAGGAGTCTGACAGCTGCTCCTCTGCAACCCTGCTGGGCCAGCCTGGCCTGGAAGAGCTAGTGGAGGATGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CAA 90 bp CCTCTGGAGTCCCCCAGATGTGCTGACTCTGAAGAGCCAAGCTCTTaGAGTGACAGGGTATGGGGGCAGGACCCTCAGGGCAGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: PLESPRCADSEEPSS*SDRVWGQDPQGSWR
Trigger: CCGCCAGCTGCCCTGAGGGTCCTGCCCCCATACCCTGTCACTCAAAGAGCTTGGCTCTTCAGAGTCAGCACATCTGGGGGACTCCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 72 bp CCCAACTCGCTCCGACTTAGGCCTTGGTGGTGGTGGTaGAAGAGACCCATCCGGGGCTTGCGTTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: PNSLRLRPWWWW*KRPIRGLRSSF
Trigger: GAAGGAGGAACGCAAGCCCCGGATGGGTCTCTTCCACCACCACCACCAAGGCCTAAGTCGGAGCGAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000479196.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 90 bp CCCAGCGAGGTGTTGGACTGGGTCAGGGACGACTTGCGCAGCTTGTaGCGGAGGAAGAAGCCTTTGGCTTTGCCCATCTTGCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: PSEVLDWVRDDLRSL*RRKKPLALPILPRL
Trigger: CAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 90 bp GAGCCCAGCGAGGTGTTGGACTGGGTCAGGGACGACTTGCGCAGCTaGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATCTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: EPSEVLDWVRDDLRS*LRRKKPLALPILPR
Trigger: CCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 90 bp GTGCTGTCCGAGCCCAGCGAGGTGTTGGACTGGGTCAGGGACGACTaGCGCAGCTTGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATC +
Preference number: 6 (lower is better)
Translates to: VLSEPSEVLDWVRDD*RSLLRRKKPLALPI
Trigger: GATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTCGGACAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS TCA 72 bp TGGCCTCTGGACGCAGCCTGCTGGCAGCAAAGACGTTaGAGGTGTTGTCCCACTCAGGCAGGGCTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: WPLDAACWQQRR*RCCPTQAGLSQ
Trigger: CTGGGAAAGCCCTGCCTGAGTGGGACAACACCTTCAACGTCTTTGCTGCCAGCAGGCTGCGTCCAGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479196.1
ENST00000486777.7
CDS TCA 72 bp GAGCCACTGATAGCCTCTCCCCAAAGGCTCCTGCTCTaGCCCATCGGCCTGGGCTTCCAGGCTTCAGATGCA +
Preference number: 6 (lower is better)
Translates to: EPLIASPQRLLL*PIGLGFQASDA
Trigger: TGCATCTGAAGCCTGGAAGCCCAGGCCGATGGGTCAGAGCAGGAGCCTTTGGGGAGAGGCTATCAGTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493523.2
CDS TCA 72 bp CTTGGAGACCCACACATCAGCCTGCTGGGAGGTGGCTaGCAAGGACCCAAGCCCCTCTCCTACTGGATCCTG +
Preference number: 6 (lower is better)
Translates to: LGDPHISLLGGG*QGPKPLSYWIL
Trigger: CAGGATCCAGTAGGAGAGGGGCTTGGGTCCTTGTCAGCCACCTCCCAGCAGGCTGATGTGTGGGTCTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS GCA 72 bp GTCCAAGCACTGCCTCTGAGCTGCTGTTGCTACGACTaGCTCTGGGCCAGGTGTCATCTGTGGAACGAGGCC +
Preference number: 6 (lower is better)
Translates to: VQALPLSCCCYD*LWARCHLWNEA
Trigger: GGCCTCGTTCCACAGATGACACCTGGCCCAGAGGCAGTCGTAGCAACAGCAGCTCAGAGGCAGTGCTTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp CAATCTCGCCGCGTTCCTTCTCCTTCTTGCCTGGCTTaGAGTGCAGCTTGTACCACTGCGTGTGCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: QSRRVPSPSCLA*SAACTTACAGR
Trigger: GCGCCCAGCACACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS CCA 72 bp AGCGGGGGAGGCGGCTGGGTTTCTGAGTCGGGTCCTTaGCTTCTCTCAAGCCAAACCAGCTACTCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: SGGGGWVSESGP*LLSSQTSYSWP
Trigger: AGGCCAAGAGTAGCTGGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAGAAACCCAGCCGCCTCCCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479196.1
CDS CCA 72 bp CTGGGCCTCAGGAGCCTCAGGGCCTTCTCCAACCTCTaGAGTCCCCCAGATGTGCTGACTCTGAAGAGCCAA +
Preference number: 6 (lower is better)
Translates to: LGLRSLRAFSNL*SPPDVLTLKSQ
Trigger: TTGGCTCTTCAGAGTCAGCACATCTGGGGGACTCCAGAGGTTGGAGAAGGCCCTGAGGCTCCTGAGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CAA 72 bp GAGCCCAGCGAGGTGTTGGACTGGGTCAGGGACGACTaGCGCAGCTTGTTGCGGAGGAAGAAGCCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: EPSEVLDWVRDD*RSLLRRKKPLA
Trigger: AGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 72 bp CTGGCCTCTGGACGCAGCCTGCTGGCAGCAAAGACGTaGAAGGTGTTGTCCCACTCAGGCAGGGCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: LASGRSLLAAKT*KVLSHSGRAFP
Trigger: TGGGAAAGCCCTGCCTGAGTGGGACAACACCTTCAACGTCTTTGCTGCCAGCAGGCTGCGTCCAGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479196.1
ENST00000486777.7
CDS CAA 90 bp TTGCGCAGCTTGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATCTaGCCCAGGCTGCCCAGGTCAGGATCCTCTATGGCGCTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: LRSLLRRKKPLALPI*PRLPRSGSSMALLG
Trigger: CCCAAGCAGCGCCATAGAGGATCCTGACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS TCA 72 bp TCTGGTTGGCCTCATCGCTGTAGGTCCTCTTATGGGTaGACAGCTTGGGGGACTGTGCAGAGTCCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: SGWPHRCRSSYG*TAWGTVQSPCP
Trigger: GGGGCAGGGACTCTGCACAGTCCCCCAAGCTGTTCACCCATAAGAGGACCTACAGCGATGAGGCCAACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258098.6
ENST00000486777.7
ENST00000493523.2
CDS TCA 72 bp CAGGCATCATCAGCTGTCTCGACGTCAGGGCAAAGCTaGTTTTCGCCTCGGGAGGACTCATCGTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: QASSAVSTSGQS*FSPREDSSSWP
Trigger: GGGCCAGGACGATGAGTCCTCCCGAGGCGAAAATCAGCTTTGCCCTGACGTCGAGACAGCTGATGATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS TCA 72 bp GGCTCTGGGGGAGTGGGCAGCTCTTCTGGACCAGAATaGATAGAAGATTCCCTCGACCCTGGCGGGGATGCA +
Preference number: 6 (lower is better)
Translates to: GSGGVGSSSGPE*IEDSLDPGGDA
Trigger: TGCATCCCCGCCAGGGTCGAGGGAATCTTCTATTCATTCTGGTCCAGAAGAGCTGCCCACTCCCCCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS GCA 72 bp TGCCCAGGCTGCCCAGGTCAGGATCCTCTATGGCGCTaGTTGGGAGGATGGCAGAGGCAGATTCCAGATCAT +
Preference number: 6 (lower is better)
Translates to: CPGCPGQDPLWR*LGGWQRQIPDH
Trigger: ATGATCTGGAATCTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATCCTGACCTGGGCAGCCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS GCA 72 bp TGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATCTTaGCCAGGCTGCCCAGGTCAGGATCCTCTATGGCGC +
Preference number: 6 (lower is better)
Translates to: CCGGRSLWLCPS*PGCPGQDPLWR
Trigger: GCGCCATAGAGGATCCTGACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS GCA 72 bp AGCCCAGCGAGGTGTTGGACTGGGTCAGGGACGACTTaGGCAGCTTGTTGCGGAGGAAGAAGCCTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: SPARCWTGSGTT*AACCGGRSLWL
Trigger: AAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTCGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS GCA 72 bp GAGCTAAATAGAGATGTCCCACTGTCTGCCGGACTCTaGCCTGCTTCCACTTCCGGGGCTGGCAGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: ELNRDVPLSAGL*PASTSGAGSSL
Trigger: CAGGGAACTGCCAGCCCCGGAAGTGGAAGCAGGGCAGAGTCCGGCAGACAGTGGGACATCTCTATTTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 72 bp CTTCCTTGGAGACCCACACATCAGCCTGCTGGGAGGTaGCTGACAAGGACCCAAGCCCCTCTCCTACTGGAT +
Preference number: 6 (lower is better)
Translates to: LPWRPTHQPAGR*LTRTQAPLLLD
Trigger: ATCCAGTAGGAGAGGGGCTTGGGTCCTTGTCAGCCACCTCCCAGCAGGCTGATGTGTGGGTCTCCAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 72 bp AAGGCATCTTCCTTGGAGACCCACACATCAGCCTGCTaGGAGGTGGCTGACAAGGACCCAAGCCCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: KASSLETHTSAC*EVADKDPSPSP
Trigger: AGGAGAGGGGCTTGGGTCCTTGTCAGCCACCTCCCAGCAGGCTGATGTGTGGGTCTCCAAGGAAGATGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CAA 72 bp TCCCCCAGATGTGCTGACTCTGAAGAGCCAAGCTCTTaGAGTGACAGGGTATGGGGGCAGGACCCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: SPRCADSEEPSS*SDRVWGQDPQG
Trigger: GCCCTGAGGGTCCTGCCCCCATACCCTGTCACTCAAAGAGCTTGGCTCTTCAGAGTCAGCACATCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CAA 90 bp GTGAACTGGATGGTGACTTCAATCTCGCCGCGTTCCTTCTCCTTCTaGCCTGGCTTGGAGTGCAGCTTGTACCACTGCGTGTGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: VNWMVTSISPRSFSF*PGLECSLYHCVCWA
Trigger: CGCCCAGCACACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTCACCATCCAGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS CCA 72 bp TCACGGGGTGGGGACTGGGTTTCTGAGTCGGGTCCTTaGCTTCTCTCAAGCCAAACCAGCTACTCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: SRGGDWVSESGP*LLSSQTSYSWP
Trigger: AGGCCAAGAGTAGCTGGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAGAAACCCAGTCCCCACCCCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000493523.2
CDS CCA 72 bp GGGACTGTTTGTATAGAATCAGCAAAGGGCTCTCCCTaGAGGAAGGGACTCCAAGCACCAGGCCTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: GTVCIESAKGSP*RKGLQAPGLAG
Trigger: GCCTGCCAGGCCTGGTGCTTGGAGTCCCTTCCTCCAGGGAGAGCCCTTTGCTGATTCTATACAAACAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482554.5
CDS CAA 72 bp TTGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATCTaGCCCAGGCTGCCCAGGTCAGGATCCTCTATGGCG +
Preference number: 6 (lower is better)
Translates to: LLRRKKPLALPI*PRLPRSGSSMA
Trigger: CGCCATAGAGGATCCTGACCTGGGCAGCCTGGGCAAGATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 72 bp GAGGTGTTGGACTGGGTCAGGGACGACTTGCGCAGCTaGTTGCGGAGGAAGAAGCCTTTGGCTTTGCCCATC +
Preference number: 6 (lower is better)
Translates to: EVLDWVRDDLRS*LRRKKPLALPI
Trigger: GATGGGCAAAGCCAAAGGCTTCTTCCTCCGCAACAAGCTGCGCAAGTCGTCCCTGACCCAGTCCAACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp GACTTCAATCTCGCCGCGTTCCTTCTCCTTCTTGCCTaGCTTGGAGTGCAGCTTGTACCACTGCGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: DFNLAAFLLLLA*LGVQLVPLRVL
Trigger: CAGCACACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS CCA 72 bp CAGGCTGCCCAGGTCAGGATCCTCTATGGCGCTGCTTaGGAGGATGGCAGAGGCAGATTCCAGATCATACTT +
Preference number: 6 (lower is better)
Translates to: QAAQVRILYGAA*EDGRGRFQIIL
Trigger: AAGTATGATCTGGAATCTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATCCTGACCTGGGCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp GAGACACGTCCAGGCTGGGTTTCTGAGTCGGGTCCTTaGCTTCTCTCAAGCCAAACCAGCTACTCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: ETRPGWVSESGP*LLSSQTSYSWP
Trigger: AGGCCAAGAGTAGCTGGTTTGGCTTGAGAGAAGCCAAGGACCCGACTCAGAAACCCAGCCTGGACGTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 72 bp TTGGGGCTCACAGTTTCTGGTGATTCAGGCTGCACCTaGGGAGCAGGCTCATCAGACTCTCCCCGAAAGACT +
Preference number: 6 (lower is better)
Translates to: LGLTVSGDSGCT*GAGSSDSPRKT
Trigger: AGTCTTTCGGGGAGAGTCTGATGAGCCTGCTCCCCAGGTGCAGCCTGAATCACCAGAAACTGTGAGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CAA 90 bp GTGAACTGGATGGTGACTTCAATCTCGCCGCGTTCCTTCTCCTTCTaGCCTGGCTTGGAGTGCAGCTTGTACCACCAGGTCTCATGCTCC +
Preference number: 6 (lower is better)
Translates to: VNWMVTSISPRSFSF*PGLECSLYHQVSCS
Trigger: GGAGCATGAGACCTGGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTCACCATCCAGTTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475951.1
CDS CAA 72 bp ATGGTGACTTCAATCTCGCCGCGTTCCTTCTCCTTCTaGCCTGGCTTGGAGTGCAGCTTGTACCACTGCGTG +
Preference number: 6 (lower is better)
Translates to: MVTSISPRSFSF*PGLECSLYHCV
Trigger: CACGCAGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTCACCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258098.6
ENST00000486777.7
CDS CAA 72 bp ATGGTGACTTCAATCTCGCCGCGTTCCTTCTCCTTCTaGCCTGGCTTGGAGTGCAGCTTGTACCACCAGGTC +
Preference number: 6 (lower is better)
Translates to: MVTSISPRSFSF*PGLECSLYHQV
Trigger: GACCTGGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTCACCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475951.1
CDS TCA 72 bp AGACTAGTGAGGCTGTCTCAGCTGCAGGAGAAATGGTaGCCACATCCCAAGGCCAGGCATCATCAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: RLVRLSQLQEKW*PHPKARHHQLS
Trigger: AGACAGCTGATGATGCCTGGCCTTGGGATGTGGTCACCATTTCTCCTGCAGCTGAGACAGCCTCACTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486777.7
CDS CCA 72 bp CCAGGTCAGGATCCTCTATGGCGCTGCTTGGGAGGATaGCAGAGGCAGATTCCAGATCATACTTCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: PGQDPLWRCLGG*QRQIPDHTSSC
Trigger: GCAAGAAGAAGTATGATCTGGAATCTGCCTCTGCCATCCTCCCAAGCAGCGCCATAGAGGATCCTGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CCA 72 bp GACTTCAATCTCGCCGCGTTCCTTCTCCTTCTTGCCTaGCTTGGAGTGCAGCTTGTACCACCTGTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: DFNLAAFLLLLA*LGVQLVPPVRR
Trigger: TCTTCTCACAGGTGGTACAAGCTGCACTCCAAGCCAGGCAAGAAGGAGAAGGAACGCGGCGAGATTGAAGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493523.2
CDS TCA 72 bp GAGCAGGTGAAGGAGAGTTTAGTGCTATGTCGGCTATaGGCTCCTCGAAGAAGGGGTTGCTCTGCAAAGAGG +
Preference number: 6 (lower is better)
Translates to: EQVKESLVLCRL*APRRRGCSAKR
Trigger: CCTCTTTGCAGAGCAACCCCTTCTTCGAGGAGCTCATAGCCGACATAGCACTAAACTCTCCTTCACCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479196.1
ENST00000486777.7
CDS CAA 72 bp AAGAAGGGGTTGCTCTGCAAAGAGGTGAGGAACGGGTaGGTAAGACCCAATAATCCAGGTGGGGTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: KKGLLCKEVRNG*VRPNNPGGVAS
Trigger: TGAAGCCACCCCACCTGGATTATTGGGTCTTACCAACCCGTTCCTCACCTCTTTGCAGAGCAACCCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479196.1
ENST00000486777.7
CDS CAA 72 bp AGTGCTATGTCGGCTATGAGCTCCTCGAAGAAGGGGTaGCTCTGCAAAGAGGTGAGGAACGGGTTGGTAAGA +
Preference number: 6 (lower is better)
Translates to: SAMSAMSSSKKG*LCKEVRNGLVR
Trigger: TCTTACCAACCCGTTCCTCACCTCTTTGCAGAGCAACCCCTTCTTCGAGGAGCTCATAGCCGACATAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479196.1
ENST00000486777.7
CDS CAA 90 bp CTGCTTGGGAGGATGGCAGAGGCAGATTCCAGATCATACTTCTTCTaGCCCTTCATCTTGTCCCTGATCTTGCTGAAGGGAGACCTTGGC +
Preference number: 6 (lower is better)
Translates to: LLGRMAEADSRSYFF*PFILSLILLKGDLG
Trigger: GCCAAGGTCTCCCTTCAGCAAGATCAGGGACAAGATGAAGGGCAAGAAGAAGTATGATCTGGAATCTGCCTCTGCCATCCTCCCAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 90 bp GGAGAGTTTAGTGCTATGTCGGCTATGAGCTCCTCGAAGAAGGGGTaGCTCTGCAAAGAGGTGAGGAACGGGTTGGTAAGACCCAATAAT +
Preference number: 6 (lower is better)
Translates to: GEFSAMSAMSSSKKG*LCKEVRNGLVRPNN
Trigger: ATTATTGGGTCTTACCAACCCGTTCCTCACCTCTTTGCAGAGCAACCCCTTCTTCGAGGAGCTCATAGCCGACATAGCACTAAACTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479196.1
ENST00000486777.7
CDS CAA 90 bp ATGGCAGAGGCAGATTCCAGATCATACTTCTTCTTGCCCTTCATCTaGTCCCTGATCTTGCTGAAGGGAGACCTTGGCTTGTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: MAEADSRSYFFLPFI*SLILLKGDLGLSFM
Trigger: CATGAAGGACAAGCCAAGGTCTCCCTTCAGCAAGATCAGGGACAAGATGAAGGGCAAGAAGAAGTATGATCTGGAATCTGCCTCTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2
CDS CAA 72 bp GCAGATTCCAGATCATACTTCTTCTTGCCCTTCATCTaGTCCCTGATCTTGCTGAAGGGAGACCTTGGCTTG +
Preference number: 6 (lower is better)
Translates to: ADSRSYFFLPFI*SLILLKGDLGL
Trigger: CAAGCCAAGGTCTCCCTTCAGCAAGATCAGGGACAAGATGAAGGGCAAGAAGAAGTATGATCTGGAATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258098.6
ENST00000475951.1
ENST00000486777.7
ENST00000493523.2