RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB11FIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000107560

Ensembl transcript IDs: ENST00000355624.8, ENST00000369199.5, ENST00000483413.1

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATaGCCCAGCAGCACTGTGATCCTTTCCCTTATTTCAAAGGGACCA +
Preference number: 1 (lower is better)
Translates to: WGLSMCADRPFYIPS*PSSTVILSLISKGP
Trigger: TGGTCCCTTTGAAATAAGGGAAAGGATCACAGTGCTGCTGGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR TCA 90 bp GTGCTGACAGACCCTTCTACATACCATCATGGCCCAGCAGCACTGTaGTCCTTTCCCTTATTTCAAAGGGACCAAGTGAATGAGCATGCA +
Preference number: 1 (lower is better)
Translates to: VLTDPSTYHHGPAAL*SFPLFQRDQVNEHA
Trigger: TGCATGCTCATTCACTTGGTCCCTTTGAAATAAGGGAAAGGATCACAGTGCTGCTGGGCCATGATGGTATGTAGAAGGGTCTGTCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR TCA 90 bp TTTCTGGGCCTATGGCAGATTAGTGGGTCAGTACCAGCACCTGAGTaGGTCCTAAGGAACCACTTATTCATTGAGAATCTGGCCCATTTT +
Preference number: 1 (lower is better)
Translates to: FLGLWQISGSVPAPE*VLRNHLFIENLAHF
Trigger: AAAATGGGCCAGATTCTCAATGAATAAGTGGTTCCTTAGGACTCACTCAGGTGCTGGTACTGACCCACTAATCTGCCATAGGCCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR TCA 90 bp AGCAGCACTGTGATCCTTTCCCTTATTTCAAAGGGACCAAGTGAATaGGCATGCATCATACTTCACTTACACATACACACAAGTGACACC +
Preference number: 1 (lower is better)
Translates to: SSTVILSLISKGPSE*ACIILHLHIHTSDT
Trigger: GGTGTCACTTGTGTGTATGTGTAAGTGAAGTATGATGCATGCTCATTCACTTGGTCCCTTTGAAATAAGGGAAAGGATCACAGTGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR CCA 90 bp CTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTaGAATCTGCCCGCTGCTTTGGGTTATCAGACACACCAGGCAATC +
Preference number: 1 (lower is better)
Translates to: LYYLCNLKPSLILHS*NLPAALGYQTHQAI
Trigger: GATTGCCTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR CCA 90 bp TCCAATGATTGCATCTGGATTATTAAAGTTCTACATCTGTGCAAATaGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCA +
Preference number: 1 (lower is better)
Translates to: SNDCIWIIKVLHLCK*GLSMCADRPFYIPS
Trigger: TGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAACTTTAATAATCCAGATGCAATCATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCATCTGCCCGCTGCTTTaGGTTATCAGACACACCAGG +
Preference number: 2 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPICPLL*VIRHTR
Trigger: CCTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGAT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGTACCAGCACCTGAGTaGGTCCTAAGGAACCACTTA +
Preference number: 2 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPVPAPE*VLRNHL
Trigger: TAAGTGGTTCCTTAGGACTCACTCAGGTGCTGGTAC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCTTCAAAGGGACCAAGTaGATGAGCATGCATCATACT +
Preference number: 2 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPFKGTK*MSMHHT
Trigger: AGTATGATGCATGCTCATTCACTTGGTCCCTTTGAA...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATTCATTCCTGGAATCTaGCCGCTGCTTTGGGTTATC +
Preference number: 2 (lower is better)
Translates to: FYICANGGFPCVLTDPSTFIPGI*PLLWVI
Trigger: GATAACCCAAAGCAGCGGGCAGATTCCAGGAATGAA...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCACTACTTTGCACTTCTaGCCAAACACAGGAAACACT +
Preference number: 2 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPTTLHF*PNTGNT
Trigger: AGTGTTTCCTGTGTTTGGGCAGAAGTGCAAAGTAGT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTGTCAGTACCAGCACCTaGGTGAGTCCTAAGGAACCA +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCVSTST*VSPKEP
Trigger: TGGTTCCTTAGGACTCACTCAGGTGCTGGTACTGAC...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTGTCAGTACCAGCACCTaGGTGAGTCCTAAGGAACCA +
Preference number: 2 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIVSTST*VSPKEP
Trigger: TGGTTCCTTAGGACTCACTCAGGTGCTGGTACTGAC...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAAAGGGACCAAGTGAATaGGCATGCATCATACTTCAC +
Preference number: 2 (lower is better)
Translates to: FYICANGGFPCVLTDPSTKGPSE*ACIILH
Trigger: GTGAAGTATGATGCATGCTCATTCACTTGGTCCCTT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTATCTGCCCGCTGCTTTaGGTTATCAGACACACCAGG +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCICPLL*VIRHTR
Trigger: CCTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGAT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR CAA 90 bp CTGAAACCAAGCCTAATTCTTCATTCCTGGAATCTGCCCGCTGCTTaGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTA +
Preference number: 2 (lower is better)
Translates to: LKPSLILHSWNLPAA*GYQTHQAITYFPQL
Trigger: TAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGATTCCAGGAATGAAGAATTAGGCTTGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCTCAATAAATGAAACTTaGAGCGTAAGTGGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPSINET*SVSGRK
Trigger: CTTCCTACCACTTACGCTTCAAGTTTCATTTATTGA...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTGGCCCAGCAGCACTGTaGTCCTTTCCCTTATTTCAA +
Preference number: 2 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIGPAAL*SFPLFQ
Trigger: TTGAAATAAGGGAAAGGATCACAGTGCTGCTGGGCC...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTGCTTTCCATGTGTGCTaGCAGACCCTTCTACATACC +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCAFHVC*QTLLHT
Trigger: GGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGC...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTCTGGAATCTGCCCGCTaGTTTGGGTTATCAGACACA +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCLESAR*FGLSDT
Trigger: TGTGTCTGATAACCCAAAGCAGCGGGCAGATTCCAG...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTTCATTCCTGGAATCTaGCCGCTGCTTTGGGTTATC +
Preference number: 2 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIFIPGI*PLLWVI
Trigger: GATAACCCAAAGCAGCGGGCAGATTCCAGGAATGAA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTTCTACATACCATCATaGCCCAGCAGCACTGTGATC +
Preference number: 2 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIFYIPS*PSSTVI
Trigger: GATCACAGTGCTGCTGGGCCATGATGGTATGTAGAA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACACCAAAGGCAACCATCTaGTCTATTATTTATGTAACC +
Preference number: 2 (lower is better)
Translates to: FYICANGGFPCVLTDPSTPKATI*SIIYVT
Trigger: GGTTACATAAATAATAGAGCAGATGGTTGCCTTTGG...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTCTAATTCTTCATTCCTaGAATCTGCCCGCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCLILHS*NLPAAL
Trigger: CAAAGCAGCGGGCAGATTCCAGGAATGAAGAATTAG...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTCTAATTCTTCATTCCTaGAATCTGCCCGCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCILILHS*NLPAAL
Trigger: CAAAGCAGCGGGCAGATTCCAGGAATGAAGAATTAG...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTATAGCAGCTCACTTTaGAACCAAGGTCCATGTAGT +
Preference number: 2 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIYSSSL*NQGPCS
Trigger: ACTACATGGACCTTGGTTTCAAAGTGAGCTGCTATA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAAAATTAAAACTACTTTaGACTTCTGCCCAAACACAG +
Preference number: 2 (lower is better)
Translates to: FYICANGGFPCVLTDPSTKLKLL*TSAQTQ
Trigger: CTGTGTTTGGGCAGAAGTGCAAAGTAGTTTTAATTT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTAAAGTTCTACATCTGTaGAAATGGGGGCTTTCCATG +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCKVLHL*KWGLSM
Trigger: CATGGAAAGCCCCCATTTGCACAGATGTAGAACTTT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATTATAGCAGCTCACTTTaGAACCAAGGTCCATGTAGT +
Preference number: 2 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDYSSSL*NQGPCS
Trigger: ACTACATGGACCTTGGTTTCAAAGTGAGCTGCTATA...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTCAATAAATGAAACTTaGAGCGTAAGTGGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCISINET*SVSGRK
Trigger: CTTCCTACCACTTACGCTTCAAGTTTCATTTATTGA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR TCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTCTGGTATTCAATAAATaGAACTTGAAGCGTAAGTGG +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCLVFNK*NLKRKW
Trigger: CCACTTACGCTTCAAGTTTCATTTATTGAATACCAG...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAAAGGATGACTTGTCTTaGATCAATAGAGCACACACA +
Preference number: 2 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKKDDLS*INRAHT
Trigger: TGTGTGTGCTCTATTGATGCAAGACAAGTCATCCTT...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTAAATTAAAACTACTTTaGACTTCTGCCCAAACACAG +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCKLKLL*TSAQTQ
Trigger: CTGTGTTTGGGCAGAAGTGCAAAGTAGTTTTAATTT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTAATTCATGGAAAGATTaGGGAATATGTAAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCNSWKD*GICKSP
Trigger: TGGAGACTTACATATTCCCCAATCTTTCCATGAATT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR GCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATAAGGATGACTTGTCTTaGATCAATAGAGCACACACA +
Preference number: 2 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNKDDLS*INRAHT
Trigger: TGTGTGTGCTCTATTGATGCAAGACAAGTCATCCTT...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCAATCTGCCCGCTGCTTaGGGTTATCAGACACACCAG +
Preference number: 3 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPNLPAA*GYQTHQ
Trigger: CTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGATT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR TCA 72 bp TCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTaGCAGACCCTTCTACATACCATCATGGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: STSVQMGAFHVC*QTLLHTIMAQQ
Trigger: CTGCTGGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR CCA 72 bp TCCATGTGTGCTGACAGACCCTTCTACATACCATCATaGCCCAGCAGCACTGTGATCCTTTCCCTTATTTCA +
Preference number: 3 (lower is better)
Translates to: SMCADRPFYIPS*PSSTVILSLIS
Trigger: TGAAATAAGGGAAAGGATCACAGTGCTGCTGGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGGAACCACTTATTCATaGAGAATCTGGCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPGTTYS*RIWPIF
Trigger: GAAAATGGGCCAGATTCTCAATGAATAAGTGGTTCC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCAGTAGGAAGGATGACTaGTCTTGCATCAATAGAGCA +
Preference number: 3 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPSRKDD*SCINRA
Trigger: TGCTCTATTGATGCAAGACAAGTCATCCTTCCTACT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCACTAAGGTGACCTTTTaGGCCTCTTTTTCTACAACG +
Preference number: 3 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPTKVTF*ASFSTT
Trigger: CGTTGTAGAAAAAGAGGCCAAAAAGGTCACCTTAGT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGTAGTCAAGAGTGATTaGAAGCAGCTTCTCTATAAC +
Preference number: 3 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPVVKSD*KQLLYN
Trigger: GTTATAGAGAAGCTGCTTCAAATCACTCTTGACTAC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTAATCTGCCCGCTGCTTaGGGTTATCAGACACACCAG +
Preference number: 3 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCNLPAA*GYQTHQ
Trigger: CTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGATT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGTTGGTAGTAGTGTTTaGGGCATGCATTCTTTAAAG +
Preference number: 3 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPVGSSV*GMHSLK
Trigger: CTTTAAAGAATGCATGCCCAAAACACTACTACCAAC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGAAATTAAAACTACTTaGCACTTCTGCCCAAACACA +
Preference number: 3 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPEIKTT*HFCPNT
Trigger: TGTGTTTGGGCAGAAGTGCAAAGTAGTTTTAATTTC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR TCA 72 bp CTATGGCAGATTAGTGGGTCAGTACCAGCACCTGAGTaGGTCCTAAGGAACCACTTATTCATTGAGAATCTG +
Preference number: 3 (lower is better)
Translates to: LWQISGSVPAPE*VLRNHLFIENL
Trigger: CAGATTCTCAATGAATAAGTGGTTCCTTAGGACTCACTCAGGTGCTGGTACTGACCCACTAATCTGCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR CCA 72 bp TTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTaGAATCTGCCCGCTGCTTTGGGTTATCAGACACAC +
Preference number: 3 (lower is better)
Translates to: LCNLKPSLILHS*NLPAALGYQTH
Trigger: GTGTGTCTGATAACCCAAAGCAGCGGGCAGATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR CCA 72 bp TGCATCTGGATTATTAAAGTTCTACATCTGTGCAAATaGGGGCTTTCCATGTGTGCTGACAGACCCTTCTAC +
Preference number: 3 (lower is better)
Translates to: CIWIIKVLHLCK*GLSMCADRPFY
Trigger: GTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAACTTTAATAATCCAGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATTAGTAAGTCTTATTTaGGTTCAAGACCCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: FYICANGGFPCVLTDPSTLVSLI*VQDPKA
Trigger: TGCCTTTGGGTCTTGAACCAAAATAAGACTTACTAA...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTCTTCAAAGGTCACTCTaGATAGTCCCTGCTAATATT +
Preference number: 3 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCILQRSL*IVPANI
Trigger: AATATTAGCAGGGACTATCAAGAGTGACCTTTGAAG...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAGGAACCACTTATTCATaGAGAATCTGGCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKGTTYS*RIWPIF
Trigger: GAAAATGGGCCAGATTCTCAATGAATAAGTGGTTCC...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTTAGTAAGTCTTATTTaGGTTCAAGACCCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCLVSLI*VQDPKA
Trigger: TGCCTTTGGGTCTTGAACCAAAATAAGACTTACTAA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTTTACAAATACGAGCTaGGCCAAGTATTCTCTGATT +
Preference number: 3 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIFTNTS*AKYSLI
Trigger: AATCAGAGAATACTTGGCCAAGCTCGTATTTGTAAA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR TCA 72 bp GTGATCCTTTCCCTTATTTCAAAGGGACCAAGTGAATaGGCATGCATCATACTTCACTTACACATACACACA +
Preference number: 3 (lower is better)
Translates to: VILSLISKGPSE*ACIILHLHIHT
Trigger: TGTGTGTATGTGTAAGTGAAGTATGATGCATGCTCATTCACTTGGTCCCTTTGAAATAAGGGAAAGGATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR TCA 72 bp CACTGTGATCCTTTCCCTTATTTCAAAGGGACCAAGTaGATGAGCATGCATCATACTTCACTTACACATACA +
Preference number: 3 (lower is better)
Translates to: HCDPFPYFKGTK*MSMHHTSLTHT
Trigger: TGTATGTGTAAGTGAAGTATGATGCATGCTCATTCACTTGGTCCCTTTGAAATAAGGGAAAGGATCACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR-3UTR CAA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATCTTCAAAGGTCACTCTaGATAGTCCCTGCTAATATT +
Preference number: 3 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDLQRSL*IVPANI
Trigger: AATATTAGCAGGGACTATCAAGAGTGACCTTTGAAG...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGGCCTGCGGGGCACGTaGGGCCTGGCCACACGGACC +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPGLRGT*GLATRT
Trigger: GGTCCGTGTGGCCAGGCCTCACGTGCCCCGCAGGCC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATCCCGCCTGCCTCCTTaGGGCCGAGCAGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTSRLPP*GRAASA
Trigger: AGCGGAGGCTGCTCGGCCGCAAGGAGGCAGGCGGGA...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCCCAATTCTGCACCCCTaGCCTCCCGCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPPILHP*PPACLL
Trigger: AAGGAGGCAGGCGGGAGGCCAGGGGTGCAGAATTGG...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTCCCTGGCCTCCCGCCTaGCTCCTTGCGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCPWPPA*LLAAEQ
Trigger: CTGCTCGGCCGCAAGGAGGCAGGCGGGAGGCCAGGG...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTGCGCTTGGTTCGGCCTaGCCCGGCCGGCGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIALGSA*PGRRLL
Trigger: TAGGAGCCGCCGGCCGGGCCAGGCCGAACCAAGCGC...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355624.8
CDS-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCCGACTTCCCTATGGCTaGTGTCAAAACGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPRLPYG*CQNASR
Trigger: CCGCGAGGCGTTTTGACATCAGCCATAGGGAAGTCG...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGCTGACGAGAGTCGCTaGGGACCCAAGAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPADESR*GPKRKG
Trigger: GCCTTTTCTCTTGGGTCCTCAGCGACTCTCGTCAGC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTCCCGCCTGCCTCCTTaGGGCCGAGCAGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCISRLPP*GRAASA
Trigger: AGCGGAGGCTGCTCGGCCGCAAGGAGGCAGGCGGGA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTAGGCCCACCATCACCTaGCCGCGCCGTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCRPTIT*PRRAGL
Trigger: GAGGCCTGCACGGCGCGGCCAGGTGATGGTGGGCCT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATCCCTGGCCTCCCGCCTaGCTCCTTGCGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDPWPPA*LLAAEQ
Trigger: CTGCTCGGCCGCAAGGAGGCAGGCGGGAGGCCAGGG...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAGGGTCCCCTTTCGTCTaGAGAAACACAGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTGSPFV*RNTEAH
Trigger: GTGGGCCTCTGTGTTTCTCCAGACGAAAGGGGACCC...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCCTGGAATCTGCCCGCTaGTTTGGGTTATCAGACACA +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPLESAR*FGLSDT
Trigger: TGTGTCTGATAACCCAAAGCAGCGGGCAGATTCCAG...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGTTGGAAACCACTTTTaGGCTTGCTCGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPVGNHF*ACSDSI
Trigger: GATGCTGTCCGAGCAAGCCCAAAAGTGGTTTCCAAC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCAGCGGGCTGCAGGGCTaGGGGCGCTTGGTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIISGLQG*GRLVRP
Trigger: AGGCCGAACCAAGCGCCCGCAGCCCTGCAGCCCGCT...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355624.8
CDS-3UTR CCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAGACCTGCACGTGGGTTaGAAACCACTTTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTDLHVG*KPLLGL
Trigger: CAAGCCCAAAAGTGGTTTCCAACCCACGTGCAGGTC...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACACAGACTACGATACCCTaGAGTGGCATCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTQTTIP*SGIKGV
Trigger: AACCCCTTTGATGCCACTGCAGGGTATCGTAGTCTG...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACACTGGAATCTGCCCGCTaGTTTGGGTTATCAGACACA +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTLESAR*FGLSDT
Trigger: TGTGTCTGATAACCCAAAGCAGCGGGCAGATTCCAG...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATTCTCTGGACTTCCCTaGATTAGCAATCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTFSGLP*ISNPGS
Trigger: GCTACCTGGATTGCTAATTCAGGGAAGTCCAGAGAA...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAGCTGACGAGAGTCGCTaGGGACCCAAGAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKADESR*GPKRKG
Trigger: GCCTTTTCTCTTGGGTCCTCAGCGACTCTCGTCAGC...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATGTCCGGGATTTTCCTaGGGTCTTCATTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTCPGFS*GLHCLL
Trigger: CAACAAGCAATGAAGACCTCAGGAAAATCCCGGACA...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTGGAGCACTGTGACCTaGACGTGGGTTGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIWSTVT*TWVGNH
Trigger: GTGGTTTCCAACCCACGTGCAGGTCACAGTGCTCCA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAGCGGCACTTCCGGGTTaGCCTTCTCCATGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKAALPG*PSPCWS
Trigger: AGACCAACATGGAGAAGGCCAACCCGGAAGTGCCGC...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355624.8
CDS-3UTR CCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCGAGACTTCCACTTTCTaGAACTGTTCCAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPETSTF*NCSKGI
Trigger: GATTCCTTTGGAACAGTTCCAGAAAGTGGAAGTCTC...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCTTTTCCTTGCCCAGCTaGATTATAGTGTATGTGTCA +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPFSLPS*IIVYVS
Trigger: TGACACATACACTATAATTCAGCTGGGCAAGGAAAA...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCAAAATAAATTCATGCTaGTGTCCCATGTTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPKINSC*CPMFRC
Trigger: GCAGCGAAACATGGGACAGCAGCATGAATTTATTTT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCCAATTCTGCACCCCTaGCCTCCCGCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNPILHP*PPACLL
Trigger: AAGGAGGCAGGCGGGAGGCCAGGGGTGCAGAATTGG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTGACCTGCACGTGGGTTaGAAACCACTTTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCDLHVG*KPLLGL
Trigger: CAAGCCCAAAAGTGGTTTCCAACCCACGTGCAGGTC...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCTTCTCAGAAGACATATaGGACCCAGATAAATCAGAC +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPFSEDI*DPDKSD
Trigger: GTCTGATTTATCTGGGTCCCATATGTCTTCTGAGAA...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTCGAGTTCCCGGATGTaGGTGTCTTTCCTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCSSSRM*VSFLLR
Trigger: CCTTAGGAGGAAAGACACCCACATCCGGGAACTCGA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR CAA 72 bp AGCCTAATTCTTCATTCCTGGAATCTGCCCGCTGCTTaGGGTTATCAGACACACCAGGCAATCACATACTTC +
Preference number: 4 (lower is better)
Translates to: SLILHSWNLPAA*GYQTHQAITYF
Trigger: GAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGATTCCAGGAATGAAGAATTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCCTGTATTTCACCACTTaGAAATTCACTATTGGCATC +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPLYFTT*KFTIGI
Trigger: GATGCCAATAGTGAATTTTCAAGTGGTGAAATACAG...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATTCTGTGTGGAGATTTaGGACTTCCACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTFCVEI*DFHFLE
Trigger: TTCCAGAAAGTGGAAGTCTCAAATCTCCACACAGAA...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCAGATGGCATTATATTTaGAGCCCTGAATTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPRWHYI*SPEFCC
Trigger: ACAGCAAAATTCAGGGCTTCAAATATAATGCCATCT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATTGGAGCACTGTGACCTaGACGTGGGTTGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDWSTVT*TWVGNH
Trigger: GTGGTTTCCAACCCACGTGCAGGTCACAGTGCTCCA...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTACTGTGACCTGCACGTaGGTTGGAAACCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCITVTCT*VGNHFW
Trigger: CCAAAAGTGGTTTCCAACCCACGTGCAGGTCACAGT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAACCACTTTTGCCTTTTaGCTTCAGATCTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTTTFAF*LQIFGL
Trigger: CAAGCCAAAGATCTGAAGCCAAAAGGCAAAAGTGGT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAGCCAGCTTTCCTGGATaGTTCATACGGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKASFPG*FIRHSE
Trigger: CTCAGAGTGCCGTATGAACCATCCAGGAAAGCTGGC...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCAAAACACAAACCATCTaGAAGCTTCGAAGACTAACA +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPKTQTI*KLRRLT
Trigger: TGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGTTTT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCGACTTCCCTATGGCTaGTGTCAAAACGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNRLPYG*CQNASR
Trigger: CCGCGAGGCGTTTTGACATCAGCCATAGGGAAGTCG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTTCTCTGGACTTCCCTaGATTAGCAATCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCFSGLP*ISNPGS
Trigger: GCTACCTGGATTGCTAATTCAGGGAAGTCCAGAGAA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAAACCACTTTTGGGCTTaGTCGGACAGCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKNHFWA*SDSIIL
Trigger: CAGGATGATGCTGTCCGAGCAAGCCCAAAAGTGGTT...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCAGTACTTGGAATGATTaGAGAAGACGTATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPSTWND*RRRIRK
Trigger: TTTTCTGATACGTCTTCTGCAATCATTCCAAGTACT...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAAAGGATGACTTGTCTTaGATCAATAGAGCACACACA +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTKDDLS*INRAHT
Trigger: TGTGTGTGCTCTATTGATGCAAGACAAGTCATCCTT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTTCATTCCTGGAATCTaGCCGCTGCTTTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCFIPGI*PLLWVI
Trigger: GATAACCCAAAGCAGCGGGCAGATTCCAGGAATGAA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAACTGTGACCTGCACGTaGGTTGGAAACCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKTVTCT*VGNHFW
Trigger: CCAAAAGTGGTTTCCAACCCACGTGCAGGTCACAGT...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATTCGAGTTCCCGGATGTaGGTGTCTTTCCTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDSSSRM*VSFLLR
Trigger: CCTTAGGAGGAAAGACACCCACATCCGGGAACTCGA...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATATCTGCCCGCTGCTTTaGGTTATCAGACACACCAGG +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDICPLL*VIRHTR
Trigger: CCTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGAT...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTTCTACATACCATCATaGCCCAGCAGCACTGTGATC +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCFYIPS*PSSTVI
Trigger: GATCACAGTGCTGCTGGGCCATGATGGTATGTAGAA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTCTACATCTGTGCAAATaGGGGCTTTCCATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCLHLCK*GLSMCA
Trigger: AGCACACATGGAAAGCCCCCATTTGCACAGATGTAG...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAATTGGCATCGGGCATGTaGGTACTTGGAATGATTGCA +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKLASGM*VLGMIA
Trigger: TGCAATCATTCCAAGTACTCACATGCCCGATGCCAA...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACACTGTATTTCACCACTTaGAAATTCACTATTGGCATC +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTLYFTT*KFTIGI
Trigger: GATGCCAATAGTGAATTTTCAAGTGGTGAAATACAG...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATGTACCAGCACCTGAGTaGGTCCTAAGGAACCACTTA +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDVPAPE*VLRNHL
Trigger: TAAGTGGTTCCTTAGGACTCACTCAGGTGCTGGTAC...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATGCTTTCCATGTGTGCTaGCAGACCCTTCTACATACC +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDAFHVC*QTLLHT
Trigger: GGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGC...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAAGATTGATTGCCACCTaGCCTAAAAATTTATCCAGA +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTRLIAT*PKNLSR
Trigger: TCTGGATAAATTTTTAGGGCAGGTGGCAATCAATCT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAGTGTTTGACCTATGGTaGCAGCCTTCAGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKVFDLW*QPSVSQ
Trigger: CTGAGAAACTGAAGGCTGGCACCATAGGTCAAACAC...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAATCTCAGCTACAGAGGTaGAGTACTTTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKSQLQR*STFPCP
Trigger: TGGGCAAGGAAAAGTACTCCACCTCTGTAGCTGAGA...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTGTGAGTACTTGGAATaGTTGCAGAAGACGTATCAG +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCICEYLE*LQKTYQ
Trigger: CTGATACGTCTTCTGCAATCATTCCAAGTACTCACA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATGTTCATACGGCACTCTaGGAATACTGGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDVHTAL*EYWAFL
Trigger: AAGAAACGCCCAGTATTCTCAGAGTGCCGTATGAAC...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCGTCAGTACCAGCACCTaGGTGAGTCCTAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIVSTST*VSPKEP
Trigger: TGGTTCCTTAGGACTCACTCAGGTGCTGGTACTGAC...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTATAGCAGCTCACTTTaGAACCAAGGTCCATGTAGT +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCYSSSL*NQGPCS
Trigger: ACTACATGGACCTTGGTTTCAAAGTGAGCTGCTATA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTTCAAAGGGACCAAGTaGATGAGCATGCATCATACT +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCFKGTK*MSMHHT
Trigger: AGTATGATGCATGCTCATTCACTTGGTCCCTTTGAA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTACTACTTTGCACTTCTaGCCAAACACAGGAAACACT +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCITTLHF*PNTGNT
Trigger: AGTGTTTCCTGTGTTTGGGCAGAAGTGCAAAGTAGT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTCCCCGACTTCCCTATaGCTGATGTCAAAACGCCTC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNSPTSL*LMSKRL
Trigger: GAGGCGTTTTGACATCAGCCATAGGGAAGTCGGGGA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATATTTGCCAGCTTTCCTaGATGGTTCATACGGCACTC +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDICQLS*MVHTAL
Trigger: GAGTGCCGTATGAACCATCCAGGAAAGCTGGCAAAT...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTATATTTCTGGGCCTATaGCAGATTAGTGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIIFLGL*QISGSV
Trigger: TACTGACCCACTAATCTGCCATAGGCCCAGAAATAT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTATATTTCTGGGCCTATaGCAGATTAGTGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCIFLGL*QISGSV
Trigger: TACTGACCCACTAATCTGCCATAGGCCCAGAAATAT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCATCTGCCCGCTGCTTTaGGTTATCAGACACACCAGG +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIICPLL*VIRHTR
Trigger: CCTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGAT...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAAATTCATGGAAAGATTaGGGAATATGTAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FYICANGGFPCVLTDPSTNSWKD*GICKSP
Trigger: TGGAGACTTACATATTCCCCAATCTTTCCATGAATT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATCTACATCTGTGCAAATaGGGGCTTTCCATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDLHLCK*GLSMCA
Trigger: AGCACACATGGAAAGCCCCCATTTGCACAGATGTAG...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAATGTGAGTACTTGGAATaGTTGCAGAAGACGTATCAG +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKCEYLE*LQKTYQ
Trigger: CTGATACGTCTTCTGCAATCATTCCAAGTACTCACA...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTACTAAATGCATTAGGTaGTTTCAAGTCACAAGGGCT +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCITKCIR*FQVTRA
Trigger: AGCCCTTGTGACTTGAAATCACCTAATGCATTTAGT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATGTACCAGCACCTGAGTaGGTCCTAAGGAACCACTTA +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNVPAPE*VLRNHL
Trigger: TAAGTGGTTCCTTAGGACTCACTCAGGTGCTGGTAC...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCGGCCCAGCAGCACTGTaGTCCTTTCCCTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIGPAAL*SFPLFQ
Trigger: TTGAAATAAGGGAAAGGATCACAGTGCTGCTGGGCC...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATAACCACTTTTGGGCTTaGTCGGACAGCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNNHFWA*SDSIIL
Trigger: CAGGATGATGCTGTCCGAGCAAGCCCAAAAGTGGTT...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTCATTGGTACCACTTTTaGCTTTTGGCTTCAGATCTT +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCHWYHF*LLASDL
Trigger: AAGATCTGAAGCCAAAAGGCAAAAGTGGTACCAATG...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCAGACTACGATACCCTaGAGTGGCATCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNQTTIP*SGIKGV
Trigger: AACCCCTTTGATGCCACTGCAGGGTATCGTAGTCTG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTAAGGATGACTTGTCTTaGATCAATAGAGCACACACA +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIKDDLS*INRAHT
Trigger: TGTGTGTGCTCTATTGATGCAAGACAAGTCATCCTT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAACTACTTTGCACTTCTaGCCAAACACAGGAAACACT +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKTTLHF*PNTGNT
Trigger: AGTGTTTCCTGTGTTTGGGCAGAAGTGCAAAGTAGT...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTCATATGAAAAAGCTCTaGCCATCTCAAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIHMKKL*PSQRSS
Trigger: AGAGGATCTTTGAGATGGGCAGAGCTTTTTCATATG...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATGTTGGAAACCACTTTTaGGCTTGCTCGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNVGNHF*ACSDSI
Trigger: GATGCTGTCCGAGCAAGCCCAAAAGTGGTTTCCAAC...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTTCAGATCTTTGGCTTaGAGCACTGTGACCTGCACG +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNFRSLA*STVTCT
Trigger: CGTGCAGGTCACAGTGCTCCAAGCCAAAGATCTGAA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAACCACTTTTGCCTTTTaGCTTCAGATCTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKTTFAF*LQIFGL
Trigger: CAAGCCAAAGATCTGAAGCCAAAAGGCAAAAGTGGT...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATGGGCATGTGAGTACTTaGAATGATTGCAGAAGACGT +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDGHVST*NDCRRR
Trigger: ACGTCTTCTGCAATCATTCCAAGTACTCACATGCCC...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAACCAAAGGAATCTAACTaGTGTCCGAGAAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKPKESN*CPRRCV
Trigger: AACACATCTTCTCGGACACCAGTTAGATTCCTTTGG...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATCTAATTCTTCATTCCTaGAATCTGCCCGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDLILHS*NLPAAL
Trigger: CAAAGCAGCGGGCAGATTCCAGGAATGAAGAATTAG...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCTTGGCATCGGGCATGTaGGTACTTGGAATGATTGCA +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIILASGM*VLGMIA
Trigger: TGCAATCATTCCAAGTACTCACATGCCCGATGCCAA...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTAGATGGCATTATATTTaGAGCCCTGAATTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCRWHYI*SPEFCC
Trigger: ACAGCAAAATTCAGGGCTTCAAATATAATGCCATCT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTCTTGTTGGACTCATATaGAAACTTGAAGATGGCATT +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCILVGLI*KLEDGI
Trigger: AATGCCATCTTCAAGTTTTCATATGAGTCCAACAAG...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355624.8
CDS-3UTR TCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCGTTCATACGGCACTCTaGGAATACTGGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIVHTAL*EYWAFL
Trigger: AAGAAACGCCCAGTATTCTCAGAGTGCCGTATGAAC...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTGTCCCATGTTTCGCTaGTTTCTTCAAATGGATTTT +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCCPMFR*FLQMDF
Trigger: AAAATCCATTTGAAGAAAGCAGCGAAACATGGGACA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTTCATTCCTGGAATCTaGCCGCTGCTTTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNFIPGI*PLLWVI
Trigger: GATAACCCAAAGCAGCGGGCAGATTCCAGGAATGAA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATAAAGTTCTACATCTGTaGAAATGGGGGCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDKVLHL*KWGLSM
Trigger: CATGGAAAGCCCCCATTTGCACAGATGTAGAACTTT...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTACCCGCTAAATATATaGATTTCTAGATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIYPLNI*ISRSAA
Trigger: TGCTGCAGATCTAGAAATGCATATATTTAGCGGGTA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTTACCCGCTAAATATATaGATTTCTAGATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCYPLNI*ISRSAA
Trigger: TGCTGCAGATCTAGAAATGCATATATTTAGCGGGTA...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCTCTCAGCTACAGAGGTaGAGTACTTTTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIISQLQR*STFPCP
Trigger: TGGGCAAGGAAAAGTACTCCACCTCTGTAGCTGAGA...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATATTTGCCAGCTTTCCTaGATGGTTCATACGGCACTC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNICQLS*MVHTAL
Trigger: GAGTGCCGTATGAACCATCCAGGAAAGCTGGCAAAT...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTTCTACATACCATCATaGCCCAGCAGCACTGTGATC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNFYIPS*PSSTVI
Trigger: GATCACAGTGCTGCTGGGCCATGATGGTATGTAGAA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTAAAACACAAACCATCTaGAAGCTTCGAAGACTAACA +
Preference number: 4 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIKTQTI*KLRRLT
Trigger: TGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGTTTT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAATCAATAAATGAAACTTaGAGCGTAAGTGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKSINET*SVSGRK
Trigger: CTTCCTACCACTTACGCTTCAAGTTTCATTTATTGA...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATAAGGGACCAAGTGAATaGGCATGCATCATACTTCAC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNKGPSE*ACIILH
Trigger: GTGAAGTATGATGCATGCTCATTCACTTGGTCCCTT...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTAGTACTTGGAATGATTaGAGAAGACGTATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCSTWND*RRRIRK
Trigger: TTTTCTGATACGTCTTCTGCAATCATTCCAAGTACT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATAAAATAAATTCATGCTaGTGTCCCATGTTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDKINSC*CPMFRC
Trigger: GCAGCGAAACATGGGACAGCAGCATGAATTTATTTT...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATTTGAAAATTCACTATTaGCATCGGGCATGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDLKIHY*HRACEY
Trigger: GTACTCACATGCCCGATGCCAATAGTGAATTTTCAA...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTACAATGCTGTCAGGTTaGTTCATTTTAGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCTMLSG*FILEVS
Trigger: TGATACTTCTAAAATGAACCAACCTGACAGCATTGT...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCTAATTCTTCATTCCTaGAATCTGCCCGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNLILHS*NLPAAL
Trigger: CAAAGCAGCGGGCAGATTCCAGGAATGAAGAATTAG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCTTCTGTGTGGAGATTTaGGACTTCCACTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIFCVEI*DFHFLE
Trigger: TTCCAGAAAGTGGAAGTCTCAAATCTCCACACAGAA...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATCTGGTATTCAATAAATaGAACTTGAAGCGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDLVFNK*NLKRKW
Trigger: CCACTTACGCTTCAAGTTTCATTTATTGAATACCAG...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCTTCAAAGGGACCAAGTaGATGAGCATGCATCATACT +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIFKGTK*MSMHHT
Trigger: AGTATGATGCATGCTCATTCACTTGGTCCCTTTGAA...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCCACCTTCATCCACAATaGTGTCAGGTTGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIHLHPQ*CQVGSF
Trigger: AAATGAACCAACCTGACAGCATTGTGGATGAAGGTG...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCACCTTCATCCACAATaGTGTCAGGTTGGTTCATTT +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNHLHPQ*CQVGSF
Trigger: AAATGAACCAACCTGACAGCATTGTGGATGAAGGTG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATAAAGTTCTACATCTGTaGAAATGGGGGCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNKVLHL*KWGLSM
Trigger: CATGGAAAGCCCCCATTTGCACAGATGTAGAACTTT...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCCCAAAGGAATCTAACTaGTGTCCGAGAAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIPKESN*CPRRCV
Trigger: AACACATCTTCTCGGACACCAGTTAGATTCCTTTGG...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATGAGACTTCCACTTTCTaGAACTGTTCCAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNETSTF*NCSKGI
Trigger: GATTCCTTTGGAACAGTTCCAGAAAGTGGAAGTCTC...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAAATTCATGGAAAGATTaGGGAATATGTAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKNSWKD*GICKSP
Trigger: TGGAGACTTACATATTCCCCAATCTTTCCATGAATT...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTTTTCCTTGCCCAGCTaGATTATAGTGTATGTGTCA +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNFSLPS*IIVYVS
Trigger: TGACACATACACTATAATTCAGCTGGGCAAGGAAAA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCATTGGTACCACTTTTaGCTTTTGGCTTCAGATCTT +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNHWYHF*LLASDL
Trigger: AAGATCTGAAGCCAAAAGGCAAAAGTGGTACCAATG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATAAATTAAAACTACTTTaGACTTCTGCCCAAACACAG +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDKLKLL*TSAQTQ
Trigger: CTGTGTTTGGGCAGAAGTGCAAAGTAGTTTTAATTT...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTTGAAAATTCACTATTaGCATCGGGCATGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNLKIHY*HRACEY
Trigger: GTACTCACATGCCCGATGCCAATAGTGAATTTTCAA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTTCTCAGAAGACATATaGGACCCAGATAAATCAGAC +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNFSEDI*DPDKSD
Trigger: GTCTGATTTATCTGGGTCCCATATGTCTTCTGAGAA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CCA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATACAATGCTGTCAGGTTaGTTCATTTTAGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDTMLSG*FILEVS
Trigger: TGATACTTCTAAAATGAACCAACCTGACAGCATTGT...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR TCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCCTGGTATTCAATAAATaGAACTTGAAGCGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIILVFNK*NLKRKW
Trigger: CCACTTACGCTTCAAGTTTCATTTATTGAATACCAG...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCAGATTGATTGCCACCTaGCCTAAAAATTTATCCAGA +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIRLIAT*PKNLSR
Trigger: TCTGGATAAATTTTTAGGGCAGGTGGCAATCAATCT...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCCCAAAGGCAACCATCTaGTCTATTATTTATGTAACC +
Preference number: 4 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIPKATI*SIIYVT
Trigger: GGTTACATAAATAATAGAGCAGATGGTTGCCTTTGG...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
3UTR CAA 72 bp TTCTCTATAACAAACCATGACAGTAGGAAGGATGACTaGTCTTGCATCAATAGAGCACACACATTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FSITNHDSRKDD*SCINRAHTFSN
Trigger: ATTTGAAAATGTGTGTGCTCTATTGATGCAAGACAAGTCATCCTTCCTACTGTCATGGTTTGTTATAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR GCA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATAAATTAAAACTACTTTaGACTTCTGCCCAAACACAG +
Preference number: 4 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNKLKLL*TSAQTQ
Trigger: CTGTGTTTGGGCAGAAGTGCAAAGTAGTTTTAATTT...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTCTCCCGCCTGCCTCCTaGCGGCCGAGCAGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCILPPAS*RPSSLR
Trigger: GCGGAGGCTGCTCGGCCGCAAGGAGGCAGGCGGGAG...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CCA 90 bp CCTTTTGGCTTCAGATCTTTGGCTTGGAGCACTGTGACCTGCACGTaGGTTGGAAACCACTTTTGGGCTTGCTCGGACAGCATCATCCTG +
Preference number: 5 (lower is better)
Translates to: PFGFRSLAWSTVTCT*VGNHFWACSDSIIL
Trigger: CAGGATGATGCTGTCCGAGCAAGCCCAAAAGTGGTTTCCAACCCACGTGCAGGTCACAGTGCTCCAAGCCAAAGATCTGAAGCCAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCCTCCCGCCTGCCTCCTaGCGGCCGAGCAGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIILPPAS*RPSSLR
Trigger: GCGGAGGCTGCTCGGCCGCAAGGAGGCAGGCGGGAG...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCTCCGAGAAGATGTGTTaGACCTATGGTGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPSEKMC*TYGASL
Trigger: AAGGCTGGCACCATAGGTCAAACACATCTTCTCGGA...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAAATCTGCCCGCTGCTTaGGGTTATCAGACACACCAG +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTNLPAA*GYQTHQ
Trigger: CTGGTGTGTCTGATAACCCAAAGCAGCGGGCAGATT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCTCCTCAAAGATGTCATaGAGATTGATTGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPSSKMS*RLIATC
Trigger: GCAGGTGGCAATCAATCTCAATGACATCTTTGAGGA...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATACCATCATGGCCCTCTTCCTTGGCAGTGTaGCAAATTTTTGGGGTAATG +
Preference number: 5 (lower is better)
Translates to: KWGLSMCADRPFYIPSWPSSLAV*QIFGVM
Trigger: CATTACCCCAAAAATTTGCAACACTGCCAAGGAAGA...GGGCCATGATGGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS GCA 90 bp TTTCCTGAGGTCTTCATTGCTTGTTGGACTCATATGAAAAAGCTCTaGCCATCTCAAAGATCCTCTCCATTCAGCTACTGCAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: FPEVFIACWTHMKKL*PSQRSSPFSYCRGQ
Trigger: CTGACCCCTGCAGTAGCTGAATGGAGAGGATCTTTGAGATGGGCAGAGCTTTTTCATATGAGTCCAACAAGCAATGAAGACCTCAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369199.5
CDS CCA 90 bp CAGCTGAATTATAGTGTATGTGTCATTGGTACCACTTTTGCCTTTTaGCTTCAGATCTTTGGCTTGGAGCACTGTGACCTGCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: QLNYSVCVIGTTFAF*LQIFGLEHCDLHVG
Trigger: ACCCACGTGCAGGTCACAGTGCTCCAAGCCAAAGATCTGAAGCCAAAAGGCAAAAGTGGTACCAATGACACATACACTATAATTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCGGCGGCACTTCCGGGTaGGCCTTCTCCATGTTGGTC +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIGGTSG*AFSMLV
Trigger: GACCAACATGGAGAAGGCCAACCCGGAAGTGCCGCC...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355624.8
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTCTTCAGATCTTTGGCTaGGAGCACTGTGACCTGCAC +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCILQIFG*EHCDLH
Trigger: GTGCAGGTCACAGTGCTCCAAGCCAAAGATCTGAAG...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACACAGATAAATCAGACATaGAATGCGCTGACGAGAGTC +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTQINQT*NALTRV
Trigger: GACTCTCGTCAGCGCATTCAATGTCTGATTTATCTG...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS TCA 90 bp CTGTCCGGGATTTTCCTGAGGTCTTCATTGCTTGTTGGACTCATATaGAAAAGCTCTGCCCATCTCAAAGATCCTCTCCATTCAGCTACT +
Preference number: 5 (lower is better)
Translates to: LSGIFLRSSLLVGLI*KSSAHLKDPLHSAT
Trigger: AGTAGCTGAATGGAGAGGATCTTTGAGATGGGCAGAGCTTTTTCATATGAGTCCAACAAGCAATGAAGACCTCAGGAAAATCCCGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369199.5
CDS CCA 90 bp TTCCAAAGGAATCTAACTGGTGTCCGAGAAGATGTGTTTGACCTATaGTGCCAGCCTTCAGTTTCTCAGAAGACATATGGGACCCAGATA +
Preference number: 5 (lower is better)
Translates to: FQRNLTGVREDVFDL*CQPSVSQKTYGTQI
Trigger: TATCTGGGTCCCATATGTCTTCTGAGAAACTGAAGGCTGGCACCATAGGTCAAACACATCTTCTCGGACACCAGTTAGATTCCTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355624.8
ENST00000369199.5
ENST00000483413.1
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTAAACCACTTTTGGGCTaGCTCGGACAGCATCATCCT +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIKPLLG*LGQHHP
Trigger: AGGATGATGCTGTCCGAGCAAGCCCAAAAGTGGTTT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAGGTTGGAAACCACTTTaGGGCTTGCTCGGACAGCAT +
Preference number: 5 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKGWKPL*GLLGQH
Trigger: ATGCTGTCCGAGCAAGCCCAAAAGTGGTTTCCAACC...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAAAGATGTCATTGAGATaGATTGCCACCTGCCCTAAA +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTKMSLR*IATCPK
Trigger: TTTAGGGCAGGTGGCAATCAATCTCAATGACATCTT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTCCGAGAAGATGTGTTaGACCTATGGTGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCISEKMC*TYGASL
Trigger: AAGGCTGGCACCATAGGTCAAACACATCTTCTCGGA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATGTGGCATCAAAGGGGTaGCTGTCCGGGATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDVASKG*LSGIFL
Trigger: CAGGAAAATCCCGGACAGCAACCCCTTTGATGCCAC...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAACTAAGGTGACCTTTTaGGCCTCTTTTTCTACAACG +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTTKVTF*ASFSTT
Trigger: CGTTGTAGAAAAAGAGGCCAAAAAGGTCACCTTAGT...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAATTTGGCTTCAGATCTTaGGCTTGGAGCACTGTGACC +
Preference number: 5 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKFGFRS*AWSTVT
Trigger: GGTCACAGTGCTCCAAGCCAAAGATCTGAAGCCAAA...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACACTTCAAAGGTCACTCTaGATAGTCCCTGCTAATATT +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTLQRSL*IVPANI
Trigger: AATATTAGCAGGGACTATCAAGAGTGACCTTTGAAG...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAGTAGTCAAGAGTGATTaGAAGCAGCTTCTCTATAAC +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTVVKSD*KQLLYN
Trigger: GTTATAGAGAAGCTGCTTCAAATCACTCTTGACTAC...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS TCA 90 bp CTGTGCATAACTATAAGGAAAAGAATGTATTTCTCTGGACTTCCCTaGATTAGCAATCCAGGTAGCTCGAAAGAGGCCTCCTCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: LCITIRKRMYFSGLP*ISNPGSSKEASSFQ
Trigger: TTGGAAGGAGGAGGCCTCTTTCGAGCTACCTGGATTGCTAATTCAGGGAAGTCCAGAGAAATACATTCTTTTCCTTATAGTTATGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS GCA 90 bp CTTCTTTGTTTGTCCTCAAAGATGTCATTGAGATTGATTGCCACCTaGCCTAAAAATTTATCCAGACCCACCAGGGACCTGTGCATAACT +
Preference number: 5 (lower is better)
Translates to: LLCLSSKMSLRLIAT*PKNLSRPTRDLCIT
Trigger: AGTTATGCACAGGTCCCTGGTGGGTCTGGATAAATTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAAACAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAGTTTTCCTTCTTTGTTaGTCCTCAAAGATGTCATTG +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTVFLLC*SSKMSL
Trigger: CAATGACATCTTTGAGGACAAACAAAGAAGGAAAAC...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTCAGATAAATCAGACATaGAATGCGCTGACGAGAGTC +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIQINQT*NALTRV
Trigger: GACTCTCGTCAGCGCATTCAATGTCTGATTTATCTG...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTCTTCTGTGTGGAGATTaGAGACTTCCACTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCLLCGD*RLPLSG
Trigger: TCCAGAAAGTGGAAGTCTCAAATCTCCACACAGAAG...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATGTGGCATCAAAGGGGTaGCTGTCCGGGATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNVASKG*LSGIFL
Trigger: CAGGAAAATCCCGGACAGCAACCCCTTTGATGCCAC...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAACTCCTAAGGAGTTCTTaGTGTTTCACCAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKLLRSS*CFTSSC
Trigger: ACAGGAGCTGGTGAAACACAAAGAACTCCTTAGGAG...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAGAAGAAATCAGTATTTaGGGGGAGTGGACTTTAAAA +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTEEISI*GEWTLK
Trigger: TTTTAAAGTCCACTCCCCCAAAATACTGATTTCTTC...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACATTTACAAATACGAGCTaGGCCAAGTATTCTCTGATT +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTFTNTS*AKYSLI
Trigger: AATCAGAGAATACTTGGCCAAGCTCGTATTTGTAAA...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTCTACATCTGTGCAAATGGGGGCTTTCCATGTGTGCTGACAGACCCTTCTACAGAAATTAAAACTACTTaGCACTTCTGCCCAAACACA +
Preference number: 5 (lower is better)
Translates to: FYICANGGFPCVLTDPSTEIKTT*HFCPNT
Trigger: TGTGTTTGGGCAGAAGTGCAAAGTAGTTTTAATTTC...TGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAGATGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CCA 90 bp CAATTGGCTTTATTAACTGTTAGAGAATTTGCCAGCTTTCCTGGATaGTTCATACGGCACTCTGAGAATACTGGGCGTTTCTTCCATTAC +
Preference number: 5 (lower is better)
Translates to: QLALLTVREFASFPG*FIRHSENTGRFFHY
Trigger: GTAATGGAAGAAACGCCCAGTATTCTCAGAGTGCCGTATGAACCATCCAGGAAAGCTGGCAAATTCTCTAACAGTTAATAAAGCCAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATGGTTGGAAACCACTTTaGGGCTTGCTCGGACAGCAT +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNGWKPL*GLLGQH
Trigger: ATGCTGTCCGAGCAAGCCCAAAAGTGGTTTCCAACC...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCCTTCAGATCTTTGGCTaGGAGCACTGTGACCTGCAC +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIILQIFG*EHCDLH
Trigger: GTGCAGGTCACAGTGCTCCAAGCCAAAGATCTGAAG...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTTCATTGGTACCACTTTaGCCTTTTGGCTTCAGATCT +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCISLVPL*PFGFRS
Trigger: AGATCTGAAGCCAAAAGGCAAAAGTGGTACCAATGA...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTGGAACCACTTATTCATaGAGAATCTGGCCCATTTTC +
Preference number: 5 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCGTTYS*RIWPIF
Trigger: GAAAATGGGCCAGATTCTCAATGAATAAGTGGTTCC...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGTAGGAAGGATGACTaGTCTTGCATCAATAGAGCA +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCISRKDD*SCINRA
Trigger: TGCTCTATTGATGCAAGACAAGTCATCCTTCCTACT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTACTAAGGTGACCTTTTaGGCCTCTTTTTCTACAACG +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCITKVTF*ASFSTT
Trigger: CGTTGTAGAAAAAGAGGCCAAAAAGGTCACCTTAGT...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCAAACCACTTTTGGGCTaGCTCGGACAGCATCATCCT +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIKPLLG*LGQHHP
Trigger: AGGATGATGCTGTCCGAGCAAGCCCAAAAGTGGTTT...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCTTTGGCTTCAGATCTTaGGCTTGGAGCACTGTGACC +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIFGFRS*AWSTVT
Trigger: GGTCACAGTGCTCCAAGCCAAAGATCTGAAGCCAAA...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAATACCACTTTTGCCTTTaGGCTTCAGATCTTTGGCTT +
Preference number: 5 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKYHFCL*ASDLWL
Trigger: AAGCCAAAGATCTGAAGCCAAAAGGCAAAAGTGGTA...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp ACACAAACCATCTGGAAGCTTCGAAGACTAACAGGCCCACATGTATCATGTATTGTAGTCAAGAGTGATTaGAAGCAGCTTCTCTATAAC +
Preference number: 5 (lower is better)
Translates to: TQTIWKLRRLTGPHVSCIVVKSD*KQLLYN
Trigger: GTTATAGAGAAGCTGCTTCAAATCACTCTTGACTAC...AATACATGATACATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAACACAATGCTGTCAGGTaGGTTCATTTTAGAAGTATC +
Preference number: 5 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKHNAVR*VHFRSI
Trigger: GATACTTCTAAAATGAACCAACCTGACAGCATTGTG...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTTCGAAGACTAACAGGCCCACATGTATCATGTATTAGACTTCAACTCCACTGTCTATCAGATCCCCCATaGTTAAGTTTATCAGATCTT +
Preference number: 5 (lower is better)
Translates to: LRRLTGPHVSCIRLQLHCLSDPP*LSLSDL
Trigger: AAGATCTGATAAACTTAACAATGGGGGATCTGATAG...ACAGTGGAGTTGAAGTCTAATACATGATACATGTGGGCCTGTTAGTCTTCGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCCTCCTAAGGAGTTCTTaGTGTTTCACCAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIILLRSS*CFTSSC
Trigger: ACAGGAGCTGGTGAAACACAAAGAACTCCTTAGGAG...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAAGTTGGTAGTAGTGTTTaGGGCATGCATTCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKVGSSV*GMHSLK
Trigger: CTTTAAAGAATGCATGCCCAAAACACTACTACCAAC...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS TCA 90 bp ATCTGTATTTCACCACTTGAAAATTCACTATTGGCATCGGGCATGTaGGTACTTGGAATGATTGCAGAAGACGTATCAGAAAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: ICISPLENSLLASGM*VLGMIAEDVSENVP
Trigger: TGGAACATTTTCTGATACGTCTTCTGCAATCATTCCAAGTACTCACATGCCCGATGCCAATAGTGAATTTTCAAGTGGTGAAATACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CCA 90 bp TGTCTTCCGAAACACAATTCACCTTCATCCACAATGCTGTCAGGTTaGTTCATTTTAGAAGTATCAAAGCTTAATGTTCTTCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: CLPKHNSPSSTMLSG*FILEVSKLNVLLCG
Trigger: TCCACACAGAAGAACATTAAGCTTTGATACTTCTAAAATGAACCAACCTGACAGCATTGTGGATGAAGGTGAATTGTGTTTCGGAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355624.8
ENST00000369199.5
ENST00000483413.1
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTCCTCAAAGATGTCATaGAGATTGATTGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNSSKMS*RLIATC
Trigger: GCAGGTGGCAATCAATCTCAATGACATCTTTGAGGA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCTTCTGTGTGGAGATTaGAGACTTCCACTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNLLCGD*RLPLSG
Trigger: TCCAGAAAGTGGAAGTCTCAAATCTCCACACAGAAG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAATGTAAATGGGTCATTTaGTCTTCCGAAACACAATTC +
Preference number: 5 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKCKWVI*SSETQF
Trigger: GAATTGTGTTTCGGAAGACAAAATGACCCATTTACA...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp AAGGGTGGATGTGGAGTAATGCATAATGTCACGCTCGTAAAGTTCTCTTCTAAATTTACAAATACGAGCTaGGCCAAGTATTCTCTGATT +
Preference number: 5 (lower is better)
Translates to: KGGCGVMHNVTLVKFSSKFTNTS*AKYSLI
Trigger: AATCAGAGAATACTTGGCCAAGCTCGTATTTGTAAA...TTTAGAAGAGAACTTTACGAGCGTGACATTATGCATTACTCCACATCCACCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATGTTGGTAGTAGTGTTTaGGGCATGCATTCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDVGSSV*GMHSLK
Trigger: CTTTAAAGAATGCATGCCCAAAACACTACTACCAAC...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCTCATTGGTACCACTTTaGCCTTTTGGCTTCAGATCT +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIISLVPL*PFGFRS
Trigger: AGATCTGAAGCCAAAAGGCAAAAGTGGTACCAATGA...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATAAAGGAGATCTGGTTTaGTCCTTCATTGATAAGTCA +
Preference number: 5 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDKGDLV*SFIDKS
Trigger: TGACTTATCAATGAAGGACAAAACCAGATCTCCTTT...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCTCTTCCTTGGCAGTGTaGCAAATTTTTGGGGTAATG +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIISSLAV*QIFGVM
Trigger: CATTACCCCAAAAATTTGCAACACTGCCAAGGAAGA...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCAGTAGGAAGGATGACTaGTCTTGCATCAATAGAGCA +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIISRKDD*SCINRA
Trigger: TGCTCTATTGATGCAAGACAAGTCATCCTTCCTACT...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp TTGGGTTATCAGACACACCAGGCAATCACATACTTCCCACAATTATTTTCAGATTTAGTAAGTCTTATTTaGGTTCAAGACCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LGYQTHQAITYFPQLFSDLVSLI*VQDPKA
Trigger: TGCCTTTGGGTCTTGAACCAAAATAAGACTTACTAA...ATCTGAAAATAATTGTGGGAAGTATGTGATTGCCTGGTGTGTCTGATAACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCCACAATGCTGTCAGGTaGGTTCATTTTAGAAGTATC +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIHNAVR*VHFRSI
Trigger: GATACTTCTAAAATGAACCAACCTGACAGCATTGTG...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCGGTCTTCATTGCTTGTaGGACTCATATGAAAACTTG +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIGLHCL*DSYENL
Trigger: CAAGTTTTCATATGAGTCCAACAAGCAATGAAGACC...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355624.8
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCTTCAAAGGTCACTCTaGATAGTCCCTGCTAATATT +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNLQRSL*IVPANI
Trigger: AATATTAGCAGGGACTATCAAGAGTGACCTTTGAAG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCGGTCTTCATTGCTTGTaGGACTCATATGAAAAAGCT +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIGLHCL*DSYEKA
Trigger: AGCTTTTTCATATGAGTCCAACAAGCAATGAAGACC...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCGTTTTCCTTCTTTGTTaGTCCTCAAAGATGTCATTG +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIVFLLC*SSKMSL
Trigger: CAATGACATCTTTGAGGACAAACAAAGAAGGAAAAC...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp GTAACAAGTTTTTCCTTCCTTCCTTCTTTCTTTCTCTCTCTTTGTCCAATTATCAAAGGAGATCTGGTTTaGTCCTTCATTGATAAGTCA +
Preference number: 5 (lower is better)
Translates to: VTSFSFLPSFFLSLCPIIKGDLV*SFIDKS
Trigger: TGACTTATCAATGAAGGACAAAACCAGATCTCCTTT...GATAATTGGACAAAGAGAGAGAAAGAAAGAAGGAAGGAAGGAAAAACTTGTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATCTATCAGATCCCCCATaGTTAAGTTTATCAGATCTT +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNLSDPP*LSLSDL
Trigger: AAGATCTGATAAACTTAACAATGGGGGATCTGATAG...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATTTAGTAAGTCTTATTTaGGTTCAAGACCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNLVSLI*VQDPKA
Trigger: TGCCTTTGGGTCTTGAACCAAAATAAGACTTACTAA...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATGAAGAAATCAGTATTTaGGGGGAGTGGACTTTAAAA +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNEEISI*GEWTLK
Trigger: TTTTAAAGTCCACTCCCCCAAAATACTGATTTCTTC...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS-3UTR CAA 90 bp CTGCTCTATTATTTATGTAACCTGAAACCAAGCCTAATTCTTCATTCCTGGAATGAAATTAAAACTACTTaGCACTTCTGCCCAAACACA +
Preference number: 5 (lower is better)
Translates to: LLYYLCNLKPSLILHSWNEIKTT*HFCPNT
Trigger: TGTGTTTGGGCAGAAGTGCAAAGTAGTTTTAATTTC...ATTCCAGGAATGAAGAATTAGGCTTGGTTTCAGGTTACATAAATAATAGAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS GCA 72 bp GTGACCTGCACGTGGGTTGGAAACCACTTTTGGGCTTaGTCGGACAGCATCATCCTGTCCTGTTTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: VTCTWVGNHFWA*SDSIILSCFSA
Trigger: GGCAGAGAAACAGGACAGGATGATGCTGTCCGAGCAAGCCCAAAAGTGGTTTCCAACCCACGTGCAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CCA 72 bp TTCAGATCTTTGGCTTGGAGCACTGTGACCTGCACGTaGGTTGGAAACCACTTTTGGGCTTGCTCGGACAGC +
Preference number: 6 (lower is better)
Translates to: FRSLAWSTVTCT*VGNHFWACSDS
Trigger: GCTGTCCGAGCAAGCCCAAAAGTGGTTTCCAACCCACGTGCAGGTCACAGTGCTCCAAGCCAAAGATCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS GCA 72 bp TTTGGCTTCAGATCTTTGGCTTGGAGCACTGTGACCTaGACGTGGGTTGGAAACCACTTTTGGGCTTGCTCG +
Preference number: 6 (lower is better)
Translates to: FGFRSLAWSTVT*TWVGNHFWACS
Trigger: CGAGCAAGCCCAAAAGTGGTTTCCAACCCACGTGCAGGTCACAGTGCTCCAAGCCAAAGATCTGAAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CAA 90 bp CCTTCAGTTTCTCAGAAGACATATGGGACCCAGATAAATCAGACATaGAATGCGCTGACGAGAGTCGCTGAGGACCCAAGAGAAAAGGCT +
Preference number: 6 (lower is better)
Translates to: PSVSQKTYGTQINQT*NALTRVAEDPREKA
Trigger: AGCCTTTTCTCTTGGGTCCTCAGCGACTCTCGTCAGCGCATTCAATGTCTGATTTATCTGGGTCCCATATGTCTTCTGAGAAACTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355624.8
ENST00000369199.5
ENST00000483413.1
CDS CCA 72 bp CCTATGGTGCCAGCCTTCAGTTTCTCAGAAGACATATaGGACCCAGATAAATCAGACATTGAATGCGCTGAC +
Preference number: 6 (lower is better)
Translates to: PMVPAFSFSEDI*DPDKSDIECAD
Trigger: GTCAGCGCATTCAATGTCTGATTTATCTGGGTCCCATATGTCTTCTGAGAAACTGAAGGCTGGCACCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355624.8
ENST00000369199.5
ENST00000483413.1
CDS GCA 72 bp TTGTCCTCAAAGATGTCATTGAGATTGATTGCCACCTaGCCTAAAAATTTATCCAGACCCACCAGGGACCTG +
Preference number: 6 (lower is better)
Translates to: LSSKMSLRLIAT*PKNLSRPTRDL
Trigger: CAGGTCCCTGGTGGGTCTGGATAAATTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CCA 72 bp GCTGTCCGGGATTTTCCTGAGGTCTTCATTGCTTGTTaGACTCATATGAAAAAGCTCTGCCCATCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: AVRDFPEVFIAC*THMKKLCPSQR
Trigger: TCTTTGAGATGGGCAGAGCTTTTTCATATGAGTCCAACAAGCAATGAAGACCTCAGGAAAATCCCGGACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369199.5
CDS CAA 90 bp CACTCTGTTTTCCTTCTTTGTTTGTCCTCAAAGATGTCATTGAGATaGATTGCCACCTGCCCTAAAAATTTATCCAGACCCACCAGGGAC +
Preference number: 6 (lower is better)
Translates to: HSVFLLCLSSKMSLR*IATCPKNLSRPTRD
Trigger: GTCCCTGGTGGGTCTGGATAAATTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAAACAAAGAAGGAAAACAGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS TCA 72 bp TCAGCTACAGAGGTGGAGTACTTTTCCTTGCCCAGCTaGATTATAGTGTATGTGTCATTGGTACCACTTTTG +
Preference number: 6 (lower is better)
Translates to: SATEVEYFSLPS*IIVYVSLVPLL
Trigger: CAAAAGTGGTACCAATGACACATACACTATAATTCAGCTGGGCAAGGAAAAGTACTCCACCTCTGTAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS TCA 72 bp ACTATAAGGAAAAGAATGTATTTCTCTGGACTTCCCTaGATTAGCAATCCAGGTAGCTCGAAAGAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: TIRKRMYFSGLP*ISNPGSSKEAS
Trigger: GGAGGCCTCTTTCGAGCTACCTGGATTGCTAATTCAGGGAAGTCCAGAGAAATACATTCTTTTCCTTATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CCA 72 bp TTATTAACTGTTAGAGAATTTGCCAGCTTTCCTGGATaGTTCATACGGCACTCTGAGAATACTGGGCGTTTC +
Preference number: 6 (lower is better)
Translates to: LLTVREFASFPG*FIRHSENTGRF
Trigger: GAAACGCCCAGTATTCTCAGAGTGCCGTATGAACCATCCAGGAAAGCTGGCAAATTCTCTAACAGTTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS TCA 72 bp TCACCACTTGAAAATTCACTATTGGCATCGGGCATGTaGGTACTTGGAATGATTGCAGAAGACGTATCAGAA +
Preference number: 6 (lower is better)
Translates to: SPLENSLLASGM*VLGMIAEDVSE
Trigger: TTCTGATACGTCTTCTGCAATCATTCCAAGTACTCACATGCCCGATGCCAATAGTGAATTTTCAAGTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS TCA 72 bp ATTTTCCTGAGGTCTTCATTGCTTGTTGGACTCATATaGAAAAGCTCTGCCCATCTCAAAGATCCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: IFLRSSLLVGLI*KSSAHLKDPLH
Trigger: ATGGAGAGGATCTTTGAGATGGGCAGAGCTTTTTCATATGAGTCCAACAAGCAATGAAGACCTCAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369199.5
CDS CAA 90 bp CTAAACCACTCTGTTTTCCTTCTTTGTTTGTCCTCAAAGATGTCATaGAGATTGATTGCCACCTGCCCTAAAAATTTATCCAGACCCACC +
Preference number: 6 (lower is better)
Translates to: LNHSVFLLCLSSKMS*RLIATCPKNLSRPT
Trigger: GGTGGGTCTGGATAAATTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAAACAAAGAAGGAAAACAGAGTGGTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CAA 72 bp TTCCTTCTTTGTTTGTCCTCAAAGATGTCATTGAGATaGATTGCCACCTGCCCTAAAAATTTATCCAGACCC +
Preference number: 6 (lower is better)
Translates to: FLLCLSSKMSLR*IATCPKNLSRP
Trigger: GGGTCTGGATAAATTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAAACAAAGAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS GCA 72 bp ACTATTGGCATCGGGCATGTGAGTACTTGGAATGATTaGAGAAGACGTATCAGAAAATGTTCCATCATTTTT +
Preference number: 6 (lower is better)
Translates to: TIGIGHVSTWND*RRRIRKCSIIF
Trigger: AAAAATGATGGAACATTTTCTGATACGTCTTCTGCAATCATTCCAAGTACTCACATGCCCGATGCCAATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355624.8
ENST00000369199.5
CDS CCA 72 bp AAACACAATTCACCTTCATCCACAATGCTGTCAGGTTaGTTCATTTTAGAAGTATCAAAGCTTAATGTTCTT +
Preference number: 6 (lower is better)
Translates to: KHNSPSSTMLSG*FILEVSKLNVL
Trigger: AAGAACATTAAGCTTTGATACTTCTAAAATGAACCAACCTGACAGCATTGTGGATGAAGGTGAATTGTGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355624.8
ENST00000369199.5
ENST00000483413.1