Pregenerated sensors for RAB11A (Homo sapiens)
Ensembl gene IDs: ENSG00000103769Ensembl transcript IDs: ENST00000261890.7, ENST00000563580.5, ENST00000564910.5, ENST00000565075.5, ENST00000566233.5, ENST00000568850.5, ENST00000569896.1
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTGGCAGGAGAATGGCATaGACCCTGGAGGTGGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: EIMAFENNDIRLNQGTMAGRRMA*TLEVEL Trigger: AAGCTCCACCTCCAGGGTTCATGCCATTCTCCTGCC...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR TCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAGTGCCCCACACATCATaGGCACCGCAAGAGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRVPHTS*APQETK Trigger: TTTTGTCTCTTGCGGTGCTCATGATGTGTGGGGCAC...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAATTAGCCAGTCGTGGTaGCTGGCGCCTATAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRISQSW*LAPIIP Trigger: TGGGATTATAGGCGCCAGCCACCACGACTGGCTAAT...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR GCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTTCAGGATTCCACGGCTaGACCCAAAGCACTCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: NISWNSPKIQPYSKQHLSSGFHG*TQSTQR Trigger: CCTTTGAGTGCTTTGGGTGCAGCCGTGGAATCCTGA...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR TCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAGCTGAATTCACACACTaGTGCTCCCAATTCAATGTT | + |
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Preference number: 2 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRAEFTH*CSQFNV Trigger: AACATTGAATTGGGAGCATCAGTGTGTGAATTCAGC...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR TCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGATATCCACCCAGCCTTTaGATTCTTTTGCTTCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRYPPSL*ILLLLV Trigger: CACTAGAAGCAAAAGAATTCAAAGGCTGGGTGGATA...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR TCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAGGCATATTGTATAGGTaGGTGGGAAAGACTTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRGILYR*VGKTCQ Trigger: TTGACAAGTCTTTCCCACTCACCTATACAATATGCC...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTCTCAGACCTGGGAAATaGACTATACACAGCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: NISWNSPKIQPYSKQHLSLRPGK*TIHSLL Trigger: TAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAG...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR TCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTATGTCCTACATACAGTaGCAGGCTTCCATGATGAAA | + |
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Preference number: 2 (lower is better) Translates to: NISWNSPKIQPYSKQHLSMSYIQ*QASMMK Trigger: TTTCATCATGGAAGCCTGTCACTGTATGTAGGACAT...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR TCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAAACTTAAAAGATCACTaGTGTAAGGTCACTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRNLKDH*CKVTSW Trigger: CCAGCTAGTGACCTTACATCAGTGATCTTTTAAGTT...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR CAA 90 bp | CAGCCTAATGGTCTCCCTTACATAAATTATAATGACATAAGCATTTaGTATCACTTTATTGTTACCATCGACCTCCTACAGTTTGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QPNGLPYINYNDISI*YHFIVTIDLLQFGG Trigger: TCCCCCAAACTGTAGGAGGTCGATGGTAACAATAAAGTGATACAAAATGCTTATGTCATTATAATTTATGTAAGGGAGACCATTAGGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTACACATACATATTTTTaGGGATTTCCCACCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: EIMAFENNDIRLNQGTMATHTYF*GFPTIL Trigger: CAGGATGGTGGGAAATCCCCAAAAATATGTATGTGT...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAATACCTAATATTTCCTaGAATTCTCCCAAGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRIPNIS*NSPKIQ Trigger: CTGGATCTTGGGAGAATTCCAGGAAATATTAGGTAT...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTTTTAAATCTCAGACCTaGGAAATGGACTATACACAG | + |
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Preference number: 2 (lower is better) Translates to: EIMAFENNDIRLNQGTMAFKSQT*EMDYTQ Trigger: CTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAA...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CAA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAGTGAGTGGGAAAGACTaGTCAAATCCCAGAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRVSGKD*SNPRKG Trigger: CCCCTTTCTGGGATTTGACAAGTCTTTCCCACTCAC...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CAA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTCACACATACATATTTTaGGGGATTTCCCACCATCCT | + |
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Preference number: 3 (lower is better) Translates to: NISWNSPKIQPYSKQHLSHTYIF*GISHHP Trigger: AGGATGGTGGGAAATCCCCAAAAATATGTATGTGTG...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CAA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAATATCCACCCAGCCTTaGAATTCTTTTGCTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRISTQP*NSFASS Trigger: ACTAGAAGCAAAAGAATTCAAAGGCTGGGTGGATAT...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR TCA 72 bp | GAGTTCATTCAGAGAATTACAGAGTTCGAATTGGGATaGATCCCCAGAGTTTATTTAATCTGGTACCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: EFIQRITEFELG*IPRVYLIWYPH Trigger: ATGAGGGTACCAGATTAAATAAACTCTGGGGATTCATCCCAATTCGAACTCTGTAATTCTCTGAATGAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR-3UTR CAA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAATAACCTCAATCATATaGATTCTCAGCCTAATGGTC | + |
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Preference number: 3 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRITSII*ILSLMV Trigger: GACCATTAGGCTGAGAATCAATATGATTGAGGTTAT...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| 3UTR TCA 72 bp | AAATTTGACACTACCAGCATTAAACCAATTATTGCCTaGGCAATAAAATGCCACATAATCTACCGCTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: KFDTTSIKPIIA*AIKCHIIYRLE Trigger: TTCCAAGCGGTAGATTATGTGGCATTTTATTGCTCAGGCAATAATTGGTTTAATGCTGGTAGTGTCAAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR GCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAACCAGGGGGCGTCGCTaGAGGGGTAACCCGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGTRGRR*RGNPSA Trigger: GGCGCTCGGGTTACCCCTGCAGCGACGCCCCCTGGT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000261890.7 ENST00000564910.5 |
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| CDS-3UTR GCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAGTCGCGGGTGCCCATTaGGCGGCCGAGGAGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRVAGAH*AAEERK Trigger: CTTTCGCTCCTCGGCCGCGCAATGGGCACCCGCGAC...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR GCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAGTCGCGGGTGCCCATTaGGCGGCCGAGGAGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGVAGAH*AAEERK Trigger: CTTTCGCTCCTCGGCCGCGCAATGGGCACCCGCGAC...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
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| CDS-3UTR GCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAACTCGTCGTCGCGGGTaGCCATTGCGCGGCCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRTRRRG*PLRGRG Trigger: TCCTCGGCCGCGCAATGGGCACCCGCGACGACGAGT...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR GCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAACTCGTCGTCGCGGGTaGCCATTGCGCGGCCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGTRRRG*PLRGRG Trigger: TCCTCGGCCGCGCAATGGGCACCCGCGACGACGAGT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
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| CDS-3UTR CCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAGGGCGGGAGCAGCAGTaGTATCTGTGGGACCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRGREQQ*YLWDQG Trigger: CCCCTGGTCCCACAGATACCACTGCTGCTCCCGCCC...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR CCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAGGGCGGGAGCAGCAGTaGTATCTGTGGGACCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGGREQQ*YLWDQG Trigger: CCCCTGGTCCCACAGATACCACTGCTGCTCCCGCCC...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261890.7 ENST00000564910.5 |
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| CDS-3UTR CCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACAGCAGTGGTATCTGTaGGACCAGGGGGCGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGQQWYL*DQGASL Trigger: CAGCGACGCCCCCTGGTCCCACAGATACCACTGCTG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000261890.7 ENST00000564910.5 |
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| CDS-3UTR CCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTCAGCAGTGGTATCTGTaGGACCAGGGGGCGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: NISWNSPKIQPYSKQHLSQQWYL*DQGASL Trigger: CAGCGACGCCCCCTGGTCCCACAGATACCACTGCTG...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR CCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTTCCCAGAAAGGGGCGTaGCACCAGCACCACCCAACC | + |
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Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMASQKGA*HQHHPT Trigger: GGTTGGGTGGTGCTGGTGCCACGCCCCTTTCTGGGA...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR CCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACTTCAACTGCCGGACTaGGTGAAGAGCCCCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGLQLPD*VKSPSL Trigger: CAGGGAGGGGCTCTTCACCCAGTCCGGCAGTTGAAG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564910.5 |
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| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAGGCAGGAGAATGGCATaGACCCTGGAGGTGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGGRRMA*TLEVEL Trigger: AAGCTCCACCTCCAGGGTTCATGCCATTCTCCTGCC...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR TCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAAGGTGGAGCTTGCAGTaGGCTGAGATGGTGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRRWSLQ*AEMVPL Trigger: CAATGGCACCATCTCAGCTCACTGCAAGCTCCACCT...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR CCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTGCTGAGGCAGGAGAATaGCATGAACCCTGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMAAEAGE*HEPWRW Trigger: CCACCTCCAGGGTTCATGCCATTCTCCTGCCTCAGC...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAGTGCCCCACACATCATaGGCACCGCAAGAGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGVPHTS*APQETK Trigger: TTTTGTCTCTTGCGGTGCTCATGATGTGTGGGGCAC...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR GCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGATCAGGATTCCACGGCTaGACCCAAAGCACTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGSGFHG*TQSTQR Trigger: CCTTTGAGTGCTTTGGGTGCAGCCGTGGAATCCTGA...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR GCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAATATCGCTCTTGCCCTaGTGTGTCCCATATCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGISLLP*CVPYLC Trigger: GCACAGATATGGGACACAGCAGGGCAAGAGCGATAT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261890.7 ENST00000569896.1 |
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| CDS-3UTR CCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACAGAGGCACCCGAGATaGAATACCACAAGTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGQRHPR*NTTSLF Trigger: GAAGAGACTTGTGGTATTCCATCTCGGGTGCCTCTG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261890.7 ENST00000569896.1 |
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| CDS-3UTR CCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTATTAGCCAGTCGTGGTaGCTGGCGCCTATAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: NISWNSPKIQPYSKQHLSISQSW*LAPIIP Trigger: TGGGATTATAGGCGCCAGCCACCACGACTGGCTAAT...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR TCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTCCCTGGCTAACATGGTaGAACCCCGTCTCTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: NISWNSPKIQPYSKQHLSPWLTW*NPVSTK Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGG...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR GCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTATATCGCTCTTGCCCTaGTGTGTCCCATATCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMAISLLP*CVPYLC Trigger: GCACAGATATGGGACACAGCAGGGCAAGAGCGATAT...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR CCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTCAGAGGCACCCGAGATaGAATACCACAAGTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMAQRHPR*NTTSLF Trigger: GAAGAGACTTGTGGTATTCCATCTCGGGTGCCTCTG...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR TCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTAAATGTGACCAGCTCTaGTGGGCAACCCAAACTCAA | + |
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Preference number: 4 (lower is better) Translates to: NISWNSPKIQPYSKQHLSKCDQL*WATQTQ Trigger: TTGAGTTTGGGTTGCCCATCAGAGCTGGTCACATTT...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAATGATCAAAGAAATGTaGCCAGCTCTGATGGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGMIKEM*PALMGN Trigger: GTTGCCCATCAGAGCTGGTCACATTTCTTTGATCAT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
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| CDS-3UTR CCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACTCAGACCTGGGAAATaGACTATACACAGCCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGLRPGK*TIHSLL Trigger: TAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
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| CDS-3UTR CCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTCGACCTCCTACAGTTTaGGGGAACCCAATCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NISWNSPKIQPYSKQHLSRPPTV*GNPIIL Trigger: AAGAATGATTGGGTTCCCCCAAACTGTAGGAGGTCG...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAATGTCCTACATACAGTaGCAGGCTTCCATGATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGMSYIQ*QASMMK Trigger: TTTCATCATGGAAGCCTGTCACTGTATGTAGGACAT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
||
| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAGGCATATTGTATAGGTaGGTGGGAAAGACTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGGILYR*VGKTCQ Trigger: TTGACAAGTCTTTCCCACTCACCTATACAATATGCC...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGATGTGAGGCTCAAAAATaGAATGACCACAAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGCEAQK*NDHKSH Trigger: ATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACA...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR GCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGATTCTGCAAAAGCTCTTaGTTCATCTGTAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGFCKSS*FICRNC Trigger: GCAGTTCCTACAGATGAAGCAAGAGCTTTTGCAGAA...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
||
| CDS-3UTR CCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAGTTTTCAGTGGTTGGTaGAACATGAATAGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGVFSGW*NMNRNH Trigger: GTGGTTCCTATTCATGTTCCACCAACCACTGAAAAC...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
||
| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAGGGCCGAAGTTTCAATaGATGACAAACCATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGGPKFQ*MTNHSF Trigger: AAAAGAATGGTTTGTCATTCATTGAAACTTCGGCCC...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261890.7 ENST00000564910.5 |
||
| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGATTAAGTGGTACCACTTaGGCAGAAATTAACCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGLSGTT*AEINLS Trigger: TGAGAGGTTAATTTCTGCTCAAGTGGTACCACTTAA...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR TCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTTATCCACCCAGCCTTTaGATTCTTTTGCTTCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NISWNSPKIQPYSKQHLSYPPSL*ILLLLV Trigger: CACTAGAAGCAAAAGAATTCAAAGGCTGGGTGGATA...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR GCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTTTCTGCAAAAGCTCTTaGTTCATCTGTAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMAFCKSS*FICRNC Trigger: GCAGTTCCTACAGATGAAGCAAGAGCTTTTGCAGAA...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTAACCACATTGTTGCTTaGAGACATGTCATTTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMANHIVA*RHVIFA Trigger: CGCGAAAATGACATGTCTCCAAGCAACAATGTGGTT...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTGTTTTCAGTGGTTGGTaGAACATGAATAGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMAVFSGW*NMNRNH Trigger: GTGGTTCCTATTCATGTTCCACCAACCACTGAAAAC...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR TCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTGGGCCGAAGTTTCAATaGATGACAAACCATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMAGPKFQ*MTNHSF Trigger: AAAAGAATGGTTTGTCATTCATTGAAACTTCGGCCC...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACCACAAATTGAAACCTaGCAGGTTAGAATAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGPQIET*QVRISS Trigger: AGAACTTATTCTAACCTGTCAGGTTTCAATTTGTGG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAAATGACAACTCCAGTTaGTTTGGCATATTGTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGNDNSS*FGILYR Trigger: CCTATACAATATGCCAAATCAACTGGAGTTGTCATT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR TCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAATTTTCGCGTCTGTCTaGCATTTGCTTCATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGIFASV*HLLHSF Trigger: AAAAGAATGAAGCAAATGTCAGACAGACGCGAAAAT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569896.1 |
||
| CDS-3UTR GCA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGACAAACCATTCTTTTCTaGAAAAGCTCTTGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRQTILF*KSSCFI Trigger: GATGAAGCAAGAGCTTTTGCAGAAAAGAATGGTTTG...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR GCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACAAACCATTCTTTTCTaGAAAAGCTCTTGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGQTILF*KSSCFI Trigger: GATGAAGCAAGAGCTTTTGCAGAAAAGAATGGTTTG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000261890.7 ENST00000564910.5 |
||
| CDS-3UTR GCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGATGCTTCATTCTTTTCTaGAAAAGCTCTTGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGCFILF*KSSCFI Trigger: GATGAAGCAAGAGCTTTTGCAGAAAAGAATGAAGCA...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000569896.1 |
||
| CDS-3UTR CCA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGATTTAAATCTCAGACCTaGGAAATGGACTATACACAG | + |
|
Preference number: 4 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGFKSQT*EMDYTQ Trigger: CTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAA...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
||
| CDS-3UTR CCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTTTTAAATCTCAGACCTaGGAAATGGACTATACACAG | + |
|
Preference number: 4 (lower is better) Translates to: NISWNSPKIQPYSKQHLSFKSQT*EMDYTQ Trigger: CTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAA...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR GCA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTTACATGCTAGTATATTaGCTAGTACACAACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NISWNSPKIQPYSKQHLSYMLVY*LVHNIL Trigger: AAGGATGTTGTGTACTAGGCAATATACTAGCATGTA...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR GCA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTAAACATTCCACAAAGTaGATACCTCATTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIMAFENNDIRLNQGTMAKHSTK*IPHFDF Trigger: GAAGTCAAAATGAGGTATGCACTTTGTGGAATGTTT...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| 3UTR CAA 72 bp | GGTCTCCCTTACATAAATTATAATGACATAAGCATTTaGTATCACTTTATTGTTACCATCGACCTCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLPYINYNDISI*YHFIVTIDLLQ Trigger: CTGTAGGAGGTCGATGGTAACAATAAAGTGATACAAAATGCTTATGTCATTATAATTTATGTAAGGGAGACC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS GCA 90 bp | AAGGGCGGGAGCAGCAGTGGTATCTGTGGGACCAGGGGGCGTCGCTaGAGGGGTAACCCGAGCGCCGAGCTTCAACTGCCGGACTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KGGSSSGICGTRGRR*RGNPSAELQLPDWV Trigger: CACCCAGTCCGGCAGTTGAAGCTCGGCGCTCGGGTTACCCCTGCAGCGACGCCCCCTGGTCCCACAGATACCACTGCTGCTCCCGCCCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564910.5 ENST00000566233.5 |
||
| CDS TCA 90 bp | TCAGTTGGCGCGAACTGGATTCTTGTGCCTCTGGGTGACGAAAGGTaGAGGGATTGTACGCTTCGCCCACGCCAGCCTGGGGCTCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVGANWILVPLGDER*RDCTLRPRQPGARD Trigger: ATCCCGAGCCCCAGGCTGGCGTGGGCGAAGCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
||
| CDS TCA 90 bp | AAGAAACAGGTCAGTTGGCGCGAACTGGATTCTTGTGCCTCTGGGTaGCGAAAGGTGAAGGGATTGTACGCTTCGCCCACGCCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKQVSWRELDSCASG*RKVKGLYASPTPAW Trigger: CCAGGCTGGCGTGGGCGAAGCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGACCTGTTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
||
| CDS GCA 90 bp | GGGAGGAAGGAAGAAACAGGTCAGTTGGCGCGAACTGGATTCTTGTaGCTCTGGGTGACGAAAGGTGAAGGGATTGTACGCTTCGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRKEETGQLARTGFL*LWVTKGEGIVRFAH Trigger: GTGGGCGAAGCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGACCTGTTTCTTCCTTCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
||
| CDS CCA 90 bp | AAGGAAGAAACAGGTCAGTTGGCGCGAACTGGATTCTTGTGCCTCTaGGTGACGAAAGGTGAAGGGATTGTACGCTTCGCCCACGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEETGQLARTGFLCL*VTKGEGIVRFAHAS Trigger: GCTGGCGTGGGCGAAGCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGACCTGTTTCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
||
| CDS GCA 90 bp | GAGTTTCCTGGAGAATGTGAGCACCCTTGGTGGAGGAGCAGCAGCTaGTCAGATCTAGCAAGTCTGAGACGAACCGAGCAAGGCAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: EFPGECEHPWWRSSS*SDLASLRRTEQGNL Trigger: GAGATTGCCTTGCTCGGTTCGTCTCAGACTTGCTAGATCTGAGCAGCTGCTGCTCCTCCACCAAGGGTGCTCACATTCTCCAGGAAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563580.5 |
||
| CDS-3UTR CAA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACGTCGCGGGTGCCCATaGCGCGGCCGAGGAGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGRRGCP*RGRGAK Trigger: TTTCGCTCCTCGGCCGCGCAATGGGCACCCGCGACG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
||
| CDS-3UTR CAA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTCGTCGCGGGTGCCCATaGCGCGGCCGAGGAGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NISWNSPKIQPYSKQHLSRRGCP*RGRGAK Trigger: TTTCGCTCCTCGGCCGCGCAATGGGCACCCGCGACG...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATTGGAAGAATGTGAGGCTCAAAAATGAAATGACCACAAGAGCCATGACTAGAGCTGAGATGGTGCCATaGTACTCCAGCCTGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: NWKNVRLKNEMTTRAMTRAEMVP*YSSLGN Trigger: GTTGCCCAGGCTGGAGTACAATGGCACCATCTCAGC...TCTAGTCATGGCTCTTGTGGTCATTTCATTTTTGAGCCTCACATTCTTCCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAGTGAGTGGGAAAGACTaGTCAAATCCCAGAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGVSGKD*SNPRKG Trigger: CCCCTTTCTGGGATTTGACAAGTCTTTCCCACTCAC...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGATCGACCTCCTACAGTTaGGGGGAACCCAATCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGSTSYS*GEPNHS Trigger: AGAATGATTGGGTTCCCCCAAACTGTAGGAGGTCGA...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACGTAGATCACTCTTATaGCCCACAAGCATGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGRRSLL*PTSMIT Trigger: TGTTATCATGCTTGTGGGCAATAAGAGTGATCTACG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000569896.1 |
||
| CDS-3UTR CAA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTGAACCACATTGTTGCTaGGAGACATGTCATTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: NISWNSPKIQPYSKQHLSEPHCC*ETCHFR Trigger: GCGAAAATGACATGTCTCCAAGCAACAATGTGGTTC...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGACACACATACATATTTTaGGGGATTTCCCACCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGHTYIF*GISHHP Trigger: AGGATGGTGGGAAATCCCCAAAAATATGTATGTGTG...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTCGTAGATCACTCTTATaGCCCACAAGCATGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: NISWNSPKIQPYSKQHLSRRSLL*PTSMIT Trigger: TGTTATCATGCTTGTGGGCAATAAGAGTGATCTACG...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAACAACTCCAGTTGATTaGGCATATTGTATAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGTTPVD*AYCIGE Trigger: CTCACCTATACAATATGCCAAATCAACTGGAGTTGT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATATATTTAAATCTCAGACCTGGGAAATGGACTATACACAGCCTTCTAGGGGAATACATGCTAGTATATaGCCTAGTACACAACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: NIFKSQTWEMDYTQPSRGIHASI*PSTQHP Trigger: AGGATGTTGTGTACTAGGCAATATACTAGCATGTAT...TCCCCTAGAAGGCTGTGTATAGTCCATTTCCCAGGTCTGAGATTTAAATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | GAAATCATGGCATTTGAGAACAATGACATAAGATTAAATCAAGGCACCATGGCTTTTTGTATCACTTTATaGTTACCATCGACCTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: EIMAFENNDIRLNQGTMAFCITL*LPSTSY Trigger: GTAGGAGGTCGATGGTAACAATAAAGTGATACAAAA...AGCCATGGTGCCTTGATTTAATCTTATGTCATTGTTCTCAAATGCCATGATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS-3UTR CAA 90 bp | AATATTTCCTGGAATTCTCCCAAGATCCAGCCATACTCAAAGCAACATTTAAGTATAACCTCAATCATATaGATTCTCAGCCTAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NISWNSPKIQPYSKQHLSITSII*ILSLMV Trigger: GACCATTAGGCTGAGAATCAATATGATTGAGGTTAT...ACTTAAATGTTGCTTTGAGTATGGCTGGATCTTGGGAGAATTCCAGGAAATATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261890.7 |
||
| CDS CCA 72 bp | TTGCGCGGCCGAGGAGCGAAAGGGCGGGAGCAGCAGTaGTATCTGTGGGACCAGGGGGCGTCGCTGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRGRGAKGREQQ*YLWDQGASLQG Trigger: CCCCTGCAGCGACGCCCCCTGGTCCCACAGATACCACTGCTGCTCCCGCCCTTTCGCTCCTCGGCCGCGCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000261890.7 ENST00000564910.5 ENST00000565075.5 ENST00000566233.5 |
||
| CDS GCA 72 bp | AGCAGCAGTGGTATCTGTGGGACCAGGGGGCGTCGCTaGAGGGGTAACCCGAGCGCCGAGCTTCAACTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SSSGICGTRGRR*RGNPSAELQLP Trigger: CGGCAGTTGAAGCTCGGCGCTCGGGTTACCCCTGCAGCGACGCCCCCTGGTCCCACAGATACCACTGCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564910.5 ENST00000566233.5 |
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| CDS CCA 72 bp | AAGGTGAAGGGATTGTACGCTTCGCCCACGCCAGCCTaGGGCTCGGGATCTCCTGACCCGACGGGGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: KVKGLYASPTPA*GSGSPDPTGNH Trigger: GTGGTTCCCCGTCGGGTCAGGAGATCCCGAGCCCCAGGCTGGCGTGGGCGAAGCGTACAATCCCTTCACCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
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| CDS TCA 72 bp | GCGAACTGGATTCTTGTGCCTCTGGGTGACGAAAGGTaGAGGGATTGTACGCTTCGCCCACGCCAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ANWILVPLGDER*RDCTLRPRQPG Trigger: CCCAGGCTGGCGTGGGCGAAGCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
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| CDS CAA 90 bp | CCGGGGAGGAAGGAAGAAACAGGTCAGTTGGCGCGAACTGGATTCTaGTGCCTCTGGGTGACGAAAGGTGAAGGGATTGTACGCTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: PGRKEETGQLARTGF*CLWVTKGEGIVRFA Trigger: GGCGAAGCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGACCTGTTTCTTCCTTCCTCCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
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| CDS CAA 90 bp | CTCAGGACTCCCAGAGTGCCGGGGAGGAAGGAAGAAACAGGTCAGTaGGCGCGAACTGGATTCTTGTGCCTCTGGGTGACGAAAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LRTPRVPGRKEETGQ*ARTGFLCLWVTKGE Trigger: TTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGACCTGTTTCTTCCTTCCTCCCCGGCACTCTGGGAGTCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
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| CDS TCA 72 bp | GTCAGTTGGCGCGAACTGGATTCTTGTGCCTCTGGGTaGCGAAAGGTGAAGGGATTGTACGCTTCGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: VSWRELDSCASG*RKVKGLYASPT Trigger: CGTGGGCGAAGCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
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| CDS CCA 72 bp | ACAGGTCAGTTGGCGCGAACTGGATTCTTGTGCCTCTaGGTGACGAAAGGTGAAGGGATTGTACGCTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: TGQLARTGFLCL*VTKGEGIVRFA Trigger: GGCGAAGCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
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| CDS GCA 72 bp | GAAGAAACAGGTCAGTTGGCGCGAACTGGATTCTTGTaGCTCTGGGTGACGAAAGGTGAAGGGATTGTACGC | + |
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Preference number: 6 (lower is better) Translates to: EETGQLARTGFL*LWVTKGEGIVR Trigger: GCGTACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGACCTGTTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
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| CDS CAA 72 bp | AAGGAAGAAACAGGTCAGTTGGCGCGAACTGGATTCTaGTGCCTCTGGGTGACGAAAGGTGAAGGGATTGTA | + |
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Preference number: 6 (lower is better) Translates to: KEETGQLARTGF*CLWVTKGEGIV Trigger: TACAATCCCTTCACCTTTCGTCACCCAGAGGCACAAGAATCCAGTTCGCGCCAACTGACCTGTTTCTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563580.5 ENST00000568850.5 |
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| CDS CAA 72 bp | CCCAGCCTGGGCTATGGTAGTAAGACCTCGTCTTGTTaGAAACAAATTCTAGACATCATATCCTTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: PSLGYGSKTSSC*KQILDIISFHL Trigger: CAGATGGAAGGATATGATGTCTAGAATTTGTTTCAAACAAGACGAGGTCTTACTACCATAGCCCAGGCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563580.5 |
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