RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for QTRT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000151576

Ensembl transcript IDs: ENST00000281273.8, ENST00000460163.1, ENST00000462869.1, ENST00000462966.1, ENST00000466050.5, ENST00000466870.1, ENST00000467703.1, ENST00000472599.5, ENST00000479882.5, ENST00000482307.1, ENST00000483272.1, ENST00000485050.5, ENST00000488665.1, ENST00000490183.5, ENST00000493014.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGGCCTGGTGGGAGGTGTTTGGAGCACAAAGGTGGATCCCTCATaGATGGCCTGGGCCATCCCCTTGGTGATAAGTGACTTCTTGCTC +
Preference number: 1 (lower is better)
Translates to: WGLVGGVWSTKVDPS*MAWAIPLVISDFLL
Trigger: GAGCAAGAAGTCACTTATCACCAAGGGGATGGCCCAGGCCATTCATGAGGGATCCACCTTTGTGCTCCAAACACCTCCCACCAGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR CCA 90 bp TGGAAGGCAGACCACAATGGATCTGTACAACCAGAAGAAAGCAGCTaGGCAAACTTCTGGCTCCTAACAGGCAATTACATTGGCTCTAAA +
Preference number: 1 (lower is better)
Translates to: WKADHNGSVQPEESS*ANFWLLTGNYIGSK
Trigger: TTTAGAGCCAATGTAATTGCCTGTTAGGAGCCAGAAGTTTGCCCAGCTGCTTTCTTCTGGTTGTACAGATCCATTGTGGTCTGCCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR CCA 90 bp TATTACGTAGTTAGACTATTAATGAGCCTGGAAGGCAGACCACAATaGATCTGTACAACCAGAAGAAAGCAGCTGGGCAAACTTCTGGCT +
Preference number: 1 (lower is better)
Translates to: YYVVRLLMSLEGRPQ*ICTTRRKQLGKLLA
Trigger: AGCCAGAAGTTTGCCCAGCTGCTTTCTTCTGGTTGTACAGATCCATTGTGGTCTGCCTTCCAGGCTCATTAATAGTCTAACTACGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR CCA 90 bp CACAATGGATCTGTACAACCAGAAGAAAGCAGCTGGGCAAACTTCTaGCTCCTAACAGGCAATTACATTGGCTCTAAAAAGAAGTTGCAA +
Preference number: 1 (lower is better)
Translates to: HNGSVQPEESSWANF*LLTGNYIGSKKKLQ
Trigger: TTGCAACTTCTTTTTAGAGCCAATGTAATTGCCTGTTAGGAGCCAGAAGTTTGCCCAGCTGCTTTCTTCTGGTTGTACAGATCCATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR TCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGGGCCATGTGGTCAAATaGAGGAGTGTGACCTGGGAC +
Preference number: 2 (lower is better)
Translates to: AALPGQGGRQKYPEESPEGHVVK*RSVTWD
Trigger: GTCCCAGGTCACACTCCTTCATTTGACCACATGGCC...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR GCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTCCATTTCTGATTGGCTaGACTGCCAGGGCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: LAALPGQGGRQKYPEESPPFLIG*TARAGW
Trigger: CCACCCTGCCCTGGCAGTGCAGCCAATCAGAAATGG...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR CCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGCCAGAAGAAAGCAGCTaGGCAAACTTCTGGCTCCTA +
Preference number: 2 (lower is better)
Translates to: AALPGQGGRQKYPEESPEPEESS*ANFWLL
Trigger: TAGGAGCCAGAAGTTTGCCCAGCTGCTTTCTTCTGG...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR GCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGTGCAAGATCTCAAGATaGTTGCCTGTGGATGAGCTC +
Preference number: 2 (lower is better)
Translates to: AALPGQGGRQKYPEESPECKISR*LPVDEL
Trigger: GAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCA...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR CCA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCAGAGCCATTTCTGATTaGCTGCACTGCCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTARAISD*LHCQGR
Trigger: CCTGCCCTGGCAGTGCAGCCAATCAGAAATGGCTCT...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR TCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTCTGGCTCCAGTCTTCTaGCAAGACGAAGTCTACAAA +
Preference number: 2 (lower is better)
Translates to: LAALPGQGGRQKYPEESPLAPVF*QDEVYK
Trigger: TTTGTAGACTTCGTCTTGTCAGAAGACTGGAGCCAG...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR CCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGCCTCAATCCAATTCATaGGTCCCTCAGAATCTCATC +
Preference number: 2 (lower is better)
Translates to: AALPGQGGRQKYPEESPEPQSNS*VPQNLI
Trigger: GATGAGATTCTGAGGGACCCATGAATTGGATTGAGG...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR CCA 90 bp TGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGCCTCAATCCAATTCATaGGTCCCTCAGAATCTCATC +
Preference number: 2 (lower is better)
Translates to: WLHCQGRVEDKSIQKSLLPQSNS*VPQNLI
Trigger: GATGAGATTCTGAGGGACCCATGAATTGGATTGAGG...CAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR CCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCACTGCCAGGGCAGGGTaGAAGACAAAAGTATCCAGA +
Preference number: 2 (lower is better)
Translates to: RHMSRAHSSHTISPQASITARAG*KTKVSR
Trigger: TCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGT...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR TCA 90 bp AGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCGGTACAGGCTCAGTGTaGAGAGTGAGACTTGTATTT +
Preference number: 2 (lower is better)
Translates to: SPFVSHHFPSSLNPIHGSGTGSV*RVRLVF
Trigger: AAATACAAGTCTCACTCTTCACACTGAGCCTGTACC...GGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR CCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCTCTTCACCCTCATGTaGGCAGTTTGGTACAAAGAT +
Preference number: 2 (lower is better)
Translates to: RHMSRAHSSHTISPQASILFTLM*AVWYKD
Trigger: ATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAG...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR CCA 90 bp TGCCTGTGGATGAGCTCTTTCAACTGTGCCAGTTTGTCACTTTTTAGTGCTTCCAGTCCTCCTGGTACCTaGCTCCAGTCTTCTGACAAG +
Preference number: 2 (lower is better)
Translates to: CLWMSSFNCASLSLFSASSPPGT*LQSSDK
Trigger: CTTGTCAGAAGACTGGAGCCAGGTACCAGGAGGACT...GGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAAAGAGCTCATCCACAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR CCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTTGGTCACCAGCAGATaGTGGATGTATGCCCGAGTG +
Preference number: 2 (lower is better)
Translates to: PQTSQISSQINRHMSRAHLVTSR*WMYARV
Trigger: CACTCGGGCATACATCCACCATCTGCTGGTGACCAA...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR GCA 90 bp GTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATCAGATGGTGGATGTATaGCCGAGTGTGATTCTTACA +
Preference number: 2 (lower is better)
Translates to: VQSPFVSHHFPSSLNPIHQMVDV*PSVILT
Trigger: TGTAAGAATCACACTCGGGCATACATCCACCATCTG...ATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR CCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTGGGTTAAAGTCCTCCTaGTACCTGGCTCCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: LKPARFLLKSTGICPEPIGLKSS*YLAPVF
Trigger: GAAGACTGGAGCCAGGTACCAGGAGGACTTTAACCC...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR CCA 90 bp CTTTCAACTGTGCCAGTTTGTCACTTTTTAGTGCTTCCCGGATGTAATGGAAAACGGCCAGCAGCTCATTaGTCACCAGCAGATGGTGGA +
Preference number: 2 (lower is better)
Translates to: LSTVPVCHFLVLPGCNGKRPAAH*SPADGG
Trigger: TCCACCATCTGCTGGTGACCAATGAGCTGCTGGCCG...TTTTCCATTACATCCGGGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR CCA 90 bp TTCCAGGGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCCTCTTCACCCTCATGTaGGCAGTTTGGTACAAAGAT +
Preference number: 2 (lower is better)
Translates to: FQGYPSPVKSQEPFLIGCLFTLM*AVWYKD
Trigger: ATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAG...GCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCCCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR CCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTACTGCCAGGGCAGGGTaGAAGACAAAAGTATCCAGA +
Preference number: 2 (lower is better)
Translates to: LKPARFLLKSTGICPEPITARAG*KTKVSR
Trigger: TCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGT...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR TCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATGGTACAGGCTCAGTGTaGAGAGTGAGACTTGTATTT +
Preference number: 2 (lower is better)
Translates to: PQTSQISSQINRHMSRAHGTGSV*RVRLVF
Trigger: AAATACAAGTCTCACTCTTCACACTGAGCCTGTACC...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR TCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGCACAAGAGCCATTTCTaGTTGGCTGCACTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LKCANKKKTQETERYWTQHKSHF*LAALPG
Trigger: CCCTGGCAGTGCAGCCAATCAGAAATGGCTCTTGTG...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR GCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCAGTGAGACTTGTATTTaGAAGATCTCAAGATGCTTG +
Preference number: 2 (lower is better)
Translates to: RHMSRAHSSHTISPQASISETCI*KISRCL
Trigger: CAAGCATCTTGAGATCTTGCAAATACAAGTCTCACT...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR CCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGCTGGTGGGAGGTGTTTaGAGCACAAAGGTGGATCCC +
Preference number: 2 (lower is better)
Translates to: LKCANKKKTQETERYWTQLVGGV*STKVDP
Trigger: GGGATCCACCTTTGTGCTCCAAACACCTCCCACCAG...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR CCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGTGTAATCCCCAATACTaGAGGTGGGGCCTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: LKCANKKKTQETERYWTQCNPQY*RWGLVG
Trigger: TCCCACCAGGCCCCACCTCCAGTATTGGGGATTACA...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR TCA 90 bp CATGAATTTCATATGGATTCTGGAATATTTACCACTACTCCCCTAACGATGCATCCTGCTTTTGTCATGTaGTGTGCCTGCTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: HEFHMDSGIFTTTPLTMHPAFVM*CACSPF
Trigger: GAAGGGGGAGCAGGCACATCACATGACAAAAGCAGG...ATGCATCGTTAGGGGAGTAGTGGTAAATATTCCAGAATCCATATGAAATTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR CCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCTCATGTGGGCAGTTTaGTACAAAGATTCTTTATTT +
Preference number: 2 (lower is better)
Translates to: RHMSRAHSSHTISPQASILMWAV*YKDSLF
Trigger: AAATAAAGAATCTTTGTACCAAACTGCCCACATGAG...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR CCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTCAAGATGCTTGCCTGTaGATGAGCTCTTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: LKPARFLLKSTGICPEPIQDACL*MSSFNC
Trigger: ACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTG...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR CAA 90 bp CTCAGTGTGAAGAGTGAGACTTGTATTTGCAAGATCTCAAGATGCTaGCCTGTGGATGAGCTCTTTCAACTGTGCCAGTTTGTCACTTTT +
Preference number: 2 (lower is better)
Translates to: LSVKSETCICKISRC*PVDELFQLCQFVTF
Trigger: AAAAGTGACAAACTGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCAAATACAAGTCTCACTCTTCACACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR TCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGTCCAGAAGAGTCTCCTaGGAGTATGAGGGTGAACTA +
Preference number: 2 (lower is better)
Translates to: LKCANKKKTQETERYWTQSRRVS*EYEGEL
Trigger: TAGTTCACCCTCATACTCTCAGGAGACTCTTCTGGA...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR CCA 90 bp CCCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCACTCATGTGGGCAGTTTaGTACAAAGATTCTTTATTT +
Preference number: 2 (lower is better)
Translates to: PSNQPDFFSNQQAYVQSPLMWAV*YKDSLF
Trigger: AAATAAAGAATCTTTGTACCAAACTGCCCACATGAG...TGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR CAA 90 bp GTCACAGTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTaGAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGA +
Preference number: 2 (lower is better)
Translates to: VTVQFSLINPGHLSL*RKSLHPHVGSLVQR
Trigger: TCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAACTGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR TCA 90 bp CATGAATTTCATATGGATTCTGGAATATTTACCACTACTCCCCTAACGATGCATTCCTGGCTCATACGGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: HEFHMDSGIFTTTPLTMHSWLIR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTATGAGCCAGGA...ATGCATCGTTAGGGGAGTAGTGGTAAATATTCCAGAATCCATATGAAATTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR TCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGATCCTGGCTCATACGGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRSWLIR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTATGAGCCAGGA...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR TCA 90 bp CATGAATTTCATATGGATTCTGGAATATTTACCACTACTCCCCTAACGATGCATAGTGACTTCTTGCTCTaGGTCTTGTTCCTGCTTTTG +
Preference number: 2 (lower is better)
Translates to: HEFHMDSGIFTTTPLTMHSDFLL*VLFLLL
Trigger: CAAAAGCAGGAACAAGACTCAGAGCAAGAAGTCACT...ATGCATCGTTAGGGGAGTAGTGGTAAATATTCCAGAATCCATATGAAATTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR TCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTGGTACAGGCTCAGTGTaGAGAGTGAGACTTGTATTT +
Preference number: 2 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLGTGSV*RVRLVF
Trigger: AAATACAAGTCTCACTCTTCACACTGAGCCTGTACC...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR TCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGAATGGGTAATATAATTTaGCTATTTGTTCCCGCCCAA +
Preference number: 2 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRMGNII*LFVPAQ
Trigger: TTGGGCGGGAACAAATAGTCAAATTATATTACCCAT...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR CCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGCTCATGTGGGCAGTTTaGTACAAAGATTCTTTATTT +
Preference number: 2 (lower is better)
Translates to: LKCANKKKTQETERYWTQLMWAV*YKDSLF
Trigger: AAATAAAGAATCTTTGTACCAAACTGCCCACATGAG...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR CAA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTCCGGCCAGCAGCTCATaGGTCACCAGCAGATGGTGG +
Preference number: 3 (lower is better)
Translates to: LKPARFLLKSTGICPEPIPASSS*VTSRWW
Trigger: CCACCATCTGCTGGTGACCAATGAGCTGCTGGCCGG...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR TCA 72 bp GATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTaGTTGGCTGCACTGCCAGGGCAGGGTGGAAGACAA +
Preference number: 3 (lower is better)
Translates to: DIQAQLSHKSHF*LAALPGQGGRQ
Trigger: TTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR TCA 72 bp CTTCTTGCTCTGAGTCTTGTTCCTGCTTTTGTCATGTaGTGTGCCTGCTCCCCCTTCACCTTCTGTCATGAC +
Preference number: 3 (lower is better)
Translates to: LLALSLVPAFVM*CACSPFTFCHD
Trigger: GTCATGACAGAAGGTGAAGGGGGAGCAGGCACATCACATGACAAAAGCAGGAACAAGACTCAGAGCAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR TCA 72 bp CTCATGAATGGCCTGGGCCATCCCCTTGGTGATAAGTaGCTTCTTGCTCTGAGTCTTGTTCCTGCTTTTGTC +
Preference number: 3 (lower is better)
Translates to: LMNGLGHPLGDK*LLALSLVPAFV
Trigger: GACAAAAGCAGGAACAAGACTCAGAGCAAGAAGTCACTTATCACCAAGGGGATGGCCCAGGCCATTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR CAA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGCCTCATGTGGGCAGTTaGGTACAAAGATTCTTTATT +
Preference number: 3 (lower is better)
Translates to: AALPGQGGRQKYPEESPEPHVGS*VQRFFI
Trigger: AATAAAGAATCTTTGTACCAAACTGCCCACATGAGG...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR-3UTR CAA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTTTCAACTGTGCCAGTTaGTCACTTTTTAGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: LAALPGQGGRQKYPEESPFNCAS*SLFSAS
Trigger: GGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAA...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR TCA 72 bp TGGGCCATCCCCTTGGTGATAAGTGACTTCTTGCTCTaGGTCTTGTTCCTGCTTTTGTCATGTGATGTGCCT +
Preference number: 3 (lower is better)
Translates to: WAIPLVISDFLL*VLFLLLSCDVP
Trigger: AGGCACATCACATGACAAAAGCAGGAACAAGACTCAGAGCAAGAAGTCACTTATCACCAAGGGGATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR-3UTR CAA 90 bp GTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATCCTCATGTGGGCAGTTaGGTACAAAGATTCTTTATT +
Preference number: 3 (lower is better)
Translates to: VQSPFVSHHFPSSLNPIHPHVGS*VQRFFI
Trigger: AATAAAGAATCTTTGTACCAAACTGCCCACATGAGG...ATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
3UTR CCA 72 bp GACCACAATGGATCTGTACAACCAGAAGAAAGCAGCTaGGCAAACTTCTGGCTCCTAACAGGCAATTACATT +
Preference number: 3 (lower is better)
Translates to: DHNGSVQPEESS*ANFWLLTGNYI
Trigger: AATGTAATTGCCTGTTAGGAGCCAGAAGTTTGCCCAGCTGCTTTCTTCTGGTTGTACAGATCCATTGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR CCA 72 bp GTTAGACTATTAATGAGCCTGGAAGGCAGACCACAATaGATCTGTACAACCAGAAGAAAGCAGCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: VRLLMSLEGRPQ*ICTTRRKQLGK
Trigger: TTTGCCCAGCTGCTTTCTTCTGGTTGTACAGATCCATTGTGGTCTGCCTTCCAGGCTCATTAATAGTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR TCA 72 bp AAAGAATTACCTTCCCCTACCAGCCTCAGGATCTCCTaGTACCAATTCAATAACCACTTAAAAACCCACAGG +
Preference number: 3 (lower is better)
Translates to: KELPSPTSLRIS*YQFNNHLKTHR
Trigger: CCTGTGGGTTTTTAAGTGGTTATTGAATTGGTATCAGGAGATCCTGAGGCTGGTAGGGGAAGGTAATTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR CCA 72 bp AGACTTGTATTTGCAAGATCTCAAGATGCTTGCCTGTaGATGAGCTCTTTCAACTGTGCCAGTTTGTCACTT +
Preference number: 3 (lower is better)
Translates to: RLVFARSQDACL*MSSFNCASLSL
Trigger: AAGTGACAAACTGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCAAATACAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR TCA 72 bp TTGTATTTGCAAGATCTCAAGATGCTTGCCTGTGGATaGGCTCTTTCAACTGTGCCAGTTTGTCACTTTTTA +
Preference number: 3 (lower is better)
Translates to: LYLQDLKMLACG*ALSTVPVCHFL
Trigger: TAAAAAGTGACAAACTGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCAAATACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR-3UTR CAA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGCCTCATGTGGGCAGTTaGGTACAAAGATTCTTTATT +
Preference number: 3 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKPHVGS*VQRFFI
Trigger: AATAAAGAATCTTTGTACCAAACTGCCCACATGAGG...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGATGACAGCGTAAGCTaGGCCATGGCAGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPDDSVS*AMAGTP
Trigger: CGGGGTTCCTGCCATGGCTCAGCTTACGCTGTCATC...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp TGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGCCATTTCTGATTGGCTaGACTGCCAGGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: WLHCQGRVEDKSIQKSLLPFLIG*TARAGW
Trigger: CCACCCTGCCCTGGCAGTGCAGCCAATCAGAAATGG...CAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp TGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGCACAAGAGCCATTTCTaGTTGGCTGCACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WLHCQGRVEDKSIQKSLLHKSHF*LAALPG
Trigger: CCCTGGCAGTGCAGCCAATCAGAAATGGCTCTTGTG...CAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGCTGGTGGGAGGTGTTTaGAGCACAAAGGTGGATCCC +
Preference number: 4 (lower is better)
Translates to: AALPGQGGRQKYPEESPELVGGV*STKVDP
Trigger: GGGATCCACCTTTGTGCTCCAAACACCTCCCACCAG...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp TGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGTGTAATCCCCAATACTaGAGGTGGGGCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: WLHCQGRVEDKSIQKSLLCNPQY*RWGLVG
Trigger: TCCCACCAGGCCCCACCTCCAGTATTGGGGATTACA...CAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCCATTTCTGATTGGCTaGACTGCCAGGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RHMSRAHSSHTISPQASIPFLIG*TARAGW
Trigger: CCACCCTGCCCTGGCAGTGCAGCCAATCAGAAATGG...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCGGCCAGCAGCTCATTaGTCACCAGCAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: RHMSRAHSSHTISPQASIRPAAH*SPADGG
Trigger: TCCACCATCTGCTGGTGACCAATGAGCTGCTGGCCG...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp CCCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCAGATGACAGCGTAAGCTaGGCCATGGCAGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: PSNQPDFFSNQQAYVQSPDDSVS*AMAGTP
Trigger: CGGGGTTCCTGCCATGGCTCAGCTTACGCTGTCATC...TGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGGCTGGTAATCAAAACTaGAAGTCAGGGCACATCCCC +
Preference number: 4 (lower is better)
Translates to: WLHCQGRVEDKSIQKSLLAGNQN*KSGHIP
Trigger: GGGGATGTGCCCTGACTTTCAGTTTTGATTACCAGC...CAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCACAAGAGCCATTTCTaGTTGGCTGCACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RHMSRAHSSHTISPQASIHKSHF*LAALPG
Trigger: CCCTGGCAGTGCAGCCAATCAGAAATGGCTCTTGTG...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTCTGCCCCAAAATCACTaGCTCCAGTGCAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPLPQNH*LQCRAN
Trigger: ATTGGCTCTGCACTGGAGGCAGTGATTTTGGGGCAG...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTACCTCTGACTCTTCCTaGAGCCGCAGACAGTTATCC +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPTSDSS*SRRQLS
Trigger: GGATAACTGTCTGCGGCTGCAGGAAGAGTCAGAGGT...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CCCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCAGTGATGGGTGAGGTGTaGGGCGGAGCCAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PSNQPDFFSNQQAYVQSPVMGEV*GGASLG
Trigger: ACCAAGACTGGCTCCGCCCCACACCTCACCCATCAC...TGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCCGCACTGGAACCAGTCTaGCTGAAGGGCCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: AHSSHTISPQASIQFMGPALEPV*LKGLLN
Trigger: ATTCAGAAGGCCCTTCAGCCAGACTGGTTCCAGTGC...GGGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGGGTTAAAGTCCTCCTaGTACCTGGCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPGLKSS*YLAPVF
Trigger: GAAGACTGGAGCCAGGTACCAGGAGGACTTTAACCC...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR TCA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCCTTCTGAAGAACCTCTaGCTCTTCCTGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTALLKNL*LFLQPQ
Trigger: CTGCGGCTGCAGGAAGAGTCAGAGGTTCTTCAGAAG...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGCCATGTGGTCAAATaGAGGAGTGTGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VQSPFVSHHFPSSLNPIHGHVVK*RSVTWD
Trigger: GTCCCAGGTCACACTCCTTCATTTGACCACATGGCC...ATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp AGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCGCCTGTCTCCCAGGATaGCAACTAGGGCTATTAAGG +
Preference number: 4 (lower is better)
Translates to: SPFVSHHFPSSLNPIHGSACLPG*QLGLLR
Trigger: CCTTAATAGCCCTAGTTGTCATCCTGGGAGACAGGC...GGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATAAGGTGGATCCCTCATaGATGGCCTGGGCCATCCCC +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHKVDPS*MAWAIP
Trigger: GGGGATGGCCCAGGCCATTCATGAGGGATCCACCTT...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTGTGATGGGTGAGGTGTaGGGCGGAGCCAGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIVMGEV*GGASLG
Trigger: ACCAAGACTGGCTCCGCCCCACACCTCACCCATCAC...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCCCTCGAGCACCTCATCTaGCCGACTAACACCAGATAT +
Preference number: 4 (lower is better)
Translates to: AHSSHTISPQASIQFMGPLEHLI*PTNTRY
Trigger: ATATCTGGTGTTAGTCGGCCAGATGAGGTGCTCGAG...GGGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCTTGGTCACCAGCAGATaGTGGATGTATGCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RHMSRAHSSHTISPQASILVTSR*WMYARV
Trigger: CACTCGGGCATACATCCACCATCTGCTGGTGACCAA...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp TGTCCAAGTGAACACATTGAGAATGAATCTTCACAAGAGATAGGTCTTCAGTTACAGCCGGGCAGGGGCTaGCTGGATCGTGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CPSEHIENESSQEIGLQLQPGRG*LDRAGS
Trigger: GCTCCCTGCACGATCCAGTCAGCCCCTGCCCGGCTG...TAACTGAAGACCTATCTCTTGTGAAGATTCATTCTCAATGTGTTCACTTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGACAGCCGGGCAGGGGCTaGCTGGATCGTGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRQPGRG*LDRAGS
Trigger: GCTCCCTGCACGATCCAGTCAGCCCCTGCCCGGCTG...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATGGCTGTCTCTCGTGCTaGCCTCAGCCTCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHGCLSC*PQPLFH
Trigger: ATGGAAGAGAGGCTGAGGTCAGCACGAGAGACAGCC...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TTCCAGGGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCGGCCATGTGGTCAAATaGAGGAGTGTGACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: FQGYPSPVKSQEPFLIGCGHVVK*RSVTWD
Trigger: GTCCCAGGTCACACTCCTTCATTTGACCACATGGCC...GCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCCCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTCCCCTTGGTGATAAGTaGCTTCTTGCTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPPLGDK*LLALSL
Trigger: AAGACTCAGAGCAAGAAGTCACTTATCACCAAGGGG...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCCCTGGCTCCAGTCTTCTaGCAAGACGAAGTCTACAAA +
Preference number: 4 (lower is better)
Translates to: AHSSHTISPQASIQFMGPLAPVF*QDEVYK
Trigger: TTTGTAGACTTCGTCTTGTCAGAAGACTGGAGCCAG...GGGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR GCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTTGCAAGATCTCAAGATaGTTGCCTGTGGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPCKISR*LPVDEL
Trigger: GAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCA...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTTTTTGTCATGTGATGTaGCTGCTCCCCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPFCHVM*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACATCACATGACAAAA...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATCGGCCAGCAGCTCATTaGTCACCAGCAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHRPAAH*SPADGG
Trigger: TCCACCATCTGCTGGTGACCAATGAGCTGCTGGCCG...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGCAAGATGCTTGCCTGTaGATGAGCTCTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: AALPGQGGRQKYPEESPEQDACL*MSSFNC
Trigger: ACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTG...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGGAAGGCAGACCACAATaGATCTGTACAACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AALPGQGGRQKYPEESPEEGRPQ*ICTTRR
Trigger: TCTTCTGGTTGTACAGATCCATTGTGGTCTGCCTTC...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp TTCCAGGGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCCTGGTGGGAGGTGTTTaGAGCACAAAGGTGGATCCC +
Preference number: 4 (lower is better)
Translates to: FQGYPSPVKSQEPFLIGCLVGGV*STKVDP
Trigger: GGGATCCACCTTTGTGCTCCAAACACCTCCCACCAG...GCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCCCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCCACCCCTTGCCATTCATaGAAGAGTTATGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: AHSSHTISPQASIQFMGPTPCHS*KSYEDA
Trigger: GGCATCCTCATAACTCTTCCATGAATGGCAAGGGGT...GGGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTATATTATGCAGCGTGTaGTGGGTGAGGTGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIILCSV*WVRCGA
Trigger: CGCCCCACACCTCACCCATCACACGCTGCATAATAT...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGGAGCAGTACAAGAGTaGTTCTGGCATGCCTATAAA +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPGAVQE*FWHAYK
Trigger: TTTATAGGCATGCCAGAATCACTCTTGTACTGCTCC...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCCATGATCACACTCTTCTaGAGAACCTCTGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: AHSSHTISPQASIQFMGPMITLF*RTSDSS
Trigger: GGAAGAGTCAGAGGTTCTTCAGAAGAGTGTGATCAT...GGGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGGTTGTTGGATTTCCTTaGAAACCATCCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: AALPGQGGRQKYPEESPEVVGFP*KPSRRK
Trigger: CTTCCTTCTGGATGGTTTTCAAGGAAATCCAACAAC...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp AGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCTCCAGAAGAGTCTCCTaGGAGTATGAGGGTGAACTA +
Preference number: 4 (lower is better)
Translates to: SPFVSHHFPSSLNPIHGSSRRVS*EYEGEL
Trigger: TAGTTCACCCTCATACTCTCAGGAGACTCTTCTGGA...GGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp TGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGCATGGAGAAGTTAAGTaGATTGCCCAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: WLHCQGRVEDKSIQKSLLHGEVK*IAQESY
Trigger: ATATGACTCCTGGGCAATTCACTTAACTTCTCCATG...CAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CCCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCAGCCTGTCTCCCAGGATaGCAACTAGGGCTATTAAGG +
Preference number: 4 (lower is better)
Translates to: PSNQPDFFSNQQAYVQSPACLPG*QLGLLR
Trigger: CCTTAATAGCCCTAGTTGTCATCCTGGGAGACAGGC...TGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTAGTGACTTCTTGCTCTaGGTCTTGTTCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPSDFLL*VLFLLL
Trigger: CAAAAGCAGGAACAAGACTCAGAGCAAGAAGTCACT...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATAATCACTGCCTCCAGTaGAGAGCCAATCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: VQSPFVSHHFPSSLNPIHNHCLQ*RANQGV
Trigger: TACTCCCTGATTGGCTCTGCACTGGAGGCAGTGATT...ATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCTGCAAGATCTCAAGATaGTTGCCTGTGGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: RHMSRAHSSHTISPQASICKISR*LPVDEL
Trigger: GAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCA...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGATTCTTCTAGGTCCTaGCAACAAACCATTCGACTC +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPDSSRS*QQTIRL
Trigger: GAGTCGAATGGTTTGTTGGCAGGACCTAGAAGAATC...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTACCAGATATGAGCCTTaGCTTGTCCTCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAITRYEP*LVLRQL
Trigger: GAGCTGCCGGAGGACAAGCCAAGGCTCATATCTGGT...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATACCAGATATGAGCCTTaGCTTGTCCTCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHTRYEP*LVLRQL
Trigger: GAGCTGCCGGAGGACAAGCCAAGGCTCATATCTGGT...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCCCCTCAATCCAATTCATaGGTCCCTCAGAATCTCATC +
Preference number: 4 (lower is better)
Translates to: AHSSHTISPQASIQFMGPPQSNS*VPQNLI
Trigger: GATGAGATTCTGAGGGACCCATGAATTGGATTGAGG...GGGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTCATGAACCCAGGAGGTaGAGGTTGCATAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIHEPRR*RLHRAE
Trigger: CTCGGCTCTATGCAACCTCCACCTCCTGGGTTCATG...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGATCCAAGAAAAGAAGTaGTCGGTCAACAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: AALPGQGGRQKYPEESPEIQEKK*SVNRLS
Trigger: AGAAAGTCTGTTGACCGATCACTTCTTTTCTTGGAT...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TTCCAGGGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCATGCTTGCCTGTGGATaGGCTCTTTCAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FQGYPSPVKSQEPFLIGCMLACG*ALSTVP
Trigger: TGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCAT...GCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCGGTACAGGCTCAGTGTaGAGAGTGAGACTTGTATTT +
Preference number: 4 (lower is better)
Translates to: RHMSRAHSSHTISPQASIGTGSV*RVRLVF
Trigger: AAATACAAGTCTCACTCTTCACACTGAGCCTGTACC...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTCATGGAGAAGTTAAGTaGATTGCCCAGGAGTCATAT +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPHGEVK*IAQESY
Trigger: ATATGACTCCTGGGCAATTCACTTAACTTCTCCATG...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp AGGCATATGTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCAGCCTCAGGATCTCCTaGTACCAATTCAATAACCAC +
Preference number: 4 (lower is better)
Translates to: RHMSRAHSSHTISPQASISLRIS*YQFNNH
Trigger: GTGGTTATTGAATTGGTATCAGGAGATCCTGAGGCT...GATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGACATATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTAAAGACCCAGGAAACTaGACGATATTGGACACAGTT +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPKDPGN*TILDTV
Trigger: AACTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTT...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTGGGCTGACTGGATCGTaGAGGGAGCAGTACAAGAGT +
Preference number: 4 (lower is better)
Translates to: LKPARFLLKSTGICPEPIGLTGS*REQYKS
Trigger: ACTCTTGTACTGCTCCCTGCACGATCCAGTCAGCCC...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTGGAATATCCATGGTGTaGTCCCCTGTTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIGISMV*SPVLPR
Trigger: CCTGGGCAAAACAGGGGACCACACCATGGATATTCC...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp TTCCAGGGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCAGCCTGGAATATCCATaGTGTGGTCCCCTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: FQGYPSPVKSQEPFLIGCSLEYP*CGPLFC
Trigger: GCAAAACAGGGGACCACACCATGGATATTCCAGGCT...GCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGCACCCACAGGCCGCTTaGCTGTCTCTCGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQHPQAA*LSLVLT
Trigger: GGTCAGCACGAGAGACAGCCAAGCGGCCTGTGGGTG...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CAGCAGATGGTGGATGTATGCCCGAGTGTGATTCTTACAGCAGTAACAGGAACAACTGCCAGGGCAGGGTaGAAGACAAAAGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: QQMVDVCPSVILTAVTGTTARAG*KTKVSR
Trigger: TCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGT...TGTTCCTGTTACTGCTGTAAGAATCACACTCGGGCATACATCCACCATCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR CCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTAGAGCCATTTCTGATTaGCTGCACTGCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKPARFLLKSTGICPEPIRAISD*LHCQGR
Trigger: CCTGCCCTGGCAGTGCAGCCAATCAGAAATGGCTCT...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp AGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCGGTCAACAGACTTTCTaGCCCTTTTTATGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SPFVSHHFPSSLNPIHGSGQQTF*PFLWKL
Trigger: CAACTTCCATAAAAAGGGTCAGAAAGTCTGTTGACC...GGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCGGTACAGGCTCAGTGTaGAGAGTGAGACTTGTATTT +
Preference number: 4 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTAGTGSV*RVRLVF
Trigger: AAATACAAGTCTCACTCTTCACACTGAGCCTGTACC...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGAAGGTGGATCCCTCATaGATGGCCTGGGCCATCCCC +
Preference number: 4 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKKVDPS*MAWAIP
Trigger: GGGGATGGCCCAGGCCATTCATGAGGGATCCACCTT...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTCATTTCCACTCGTCCTaGAACACTCCACACAGACAC +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIHFHSS*NTPHRH
Trigger: GTGTCTGTGTGGAGTGTTGCAGGACGAGTGGAAATG...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATCATTTCCACTCGTCCTaGAACACTCCACACAGACAC +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHHFHSS*NTPHRH
Trigger: GTGTCTGTGTGGAGTGTTGCAGGACGAGTGGAAATG...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp AGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCAAGGGCCTTCTGAATTaGCATGAACTTGGAAACAGT +
Preference number: 4 (lower is better)
Translates to: SPFVSHHFPSSLNPIHGSKGLLN*HELGNS
Trigger: ACTGTTTCCAAGTTCATGGCAATTCAGAAGGCCCTT...GGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp CCCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATGCAAGATCTCAAGATaGTTGCCTGTGGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: PSNQPDFFSNQQAYVQSPCKISR*LPVDEL
Trigger: GAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCA...TGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGACACCCACAGGCCGCTTaGCTGTCTCTCGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRHPQAA*LSLVLT
Trigger: GGTCAGCACGAGAGACAGCCAAGCGGCCTGTGGGTG...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTTTGGTCACCAGCAGATaGTGGATGTATGCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LKPARFLLKSTGICPEPILVTSR*WMYARV
Trigger: CACTCGGGCATACATCCACCATCTGCTGGTGACCAA...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCCTCTTCACCCTCATGTaGGCAGTTTGGTACAAAGAT +
Preference number: 4 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTALFTLM*AVWYKD
Trigger: ATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAG...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATCCAGAAGAAAGCAGCTaGGCAAACTTCTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHPEESS*ANFWLL
Trigger: TAGGAGCCAGAAGTTTGCCCAGCTGCTTTCTTCTGG...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCGAAGGCAGACCACAATaGATCTGTACAACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTAEGRPQ*ICTTRR
Trigger: TCTTCTGGTTGTACAGATCCATTGTGGTCTGCCTTC...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGACTGGAGGTGGGGCCTaGTGGGAGGTGTTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKTGGGA*WEVFGA
Trigger: TGCTCCAAACACCTCCCACCAGGCCCCACCTCCAGT...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CAAGATGCTTGCCTGTGGATGAGCTCTTTCAACTGTGCCAGTTTGTCACTTTTTAGTCCTCCTGGTACCTaGCTCCAGTCTTCTGACAAG +
Preference number: 4 (lower is better)
Translates to: QDACLWMSSFNCASLSLFSPPGT*LQSSDK
Trigger: CTTGTCAGAAGACTGGAGCCAGGTACCAGGAGGACT...AAAAAGTGACAAACTGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR TCA 90 bp CCCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCAATGATCACACTCTTCTaGAGAACCTCTGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSNQPDFFSNQQAYVQSPMITLF*RTSDSS
Trigger: GGAAGAGTCAGAGGTTCTTCAGAAGAGTGTGATCAT...TGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CAGCAGATGGTGGATGTATGCCCGAGTGTGATTCTTACAGCAGTAACAGGAACAGGTACAGGCTCAGTGTaGAGAGTGAGACTTGTATTT +
Preference number: 4 (lower is better)
Translates to: QQMVDVCPSVILTAVTGTGTGSV*RVRLVF
Trigger: AAATACAAGTCTCACTCTTCACACTGAGCCTGTACC...TGTTCCTGTTACTGCTGTAAGAATCACACTCGGGCATACATCCACCATCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR TCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTCCAGAAGAGTCTCCTaGGAGTATGAGGGTGAACTA +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHSRRVS*EYEGEL
Trigger: TAGTTCACCCTCATACTCTCAGGAGACTCTTCTGGA...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp GTCCAGAGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATTTCACTACCACGTGTTaGAAAATTCTCTGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: VQSPFVSHHFPSSLNPIHFTTTC*KILCPK
Trigger: TTTGGGGCAGAGAATTTTGCAACACGTGGTAGTGAA...ATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCTCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTACCATTTCTGATTGGCTaGACTGCCAGGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLPFLIG*TARAGW
Trigger: CCACCCTGCCCTGGCAGTGCAGCCAATCAGAAATGG...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTTTTTGTCATGTGATGTaGCTGCTCCCCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIFCHVM*LLPLHL
Trigger: AAGGTGAAGGGGGAGCAGGCACATCACATGACAAAA...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAGGGCGGAGCCAGTCTTaGTATACAGAAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLGRSQS*YTEGSL
Trigger: CAGGCTGCCTTCTGTATACCAAGACTGGCTCCGCCC...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTCTCGAGCACCTCATCTaGCCGACTAACACCAGATAT +
Preference number: 4 (lower is better)
Translates to: LKPARFLLKSTGICPEPILEHLI*PTNTRY
Trigger: ATATCTGGTGTTAGTCGGCCAGATGAGGTGCTCGAG...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp TTCCAGGGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCCAAGATGCTTGCCTGTaGATGAGCTCTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: FQGYPSPVKSQEPFLIGCQDACL*MSSFNC
Trigger: ACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTG...GCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCCCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp CTTTCAACTGTGCCAGTTTGTCACTTTTTAGTGCTTCCCGGATGTAATGGAAAAAGAGCCATTTCTGATTaGCTGCACTGCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSTVPVCHFLVLPGCNGKRAISD*LHCQGR
Trigger: CCTGCCCTGGCAGTGCAGCCAATCAGAAATGGCTCT...TTTTCCATTACATCCGGGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR CCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATAGCTGGGCAAACTTCTaGCTCCTAACAGGCAATTAC +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHSWANF*LLTGNY
Trigger: GTAATTGCCTGTTAGGAGCCAGAAGTTTGCCCAGCT...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTAGCTGGGCAAACTTCTaGCTCCTAACAGGCAATTAC +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAISWANF*LLTGNY
Trigger: GTAATTGCCTGTTAGGAGCCAGAAGTTTGCCCAGCT...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGAACTGGAGGTGGGGCCTaGTGGGAGGTGTTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRTGGGA*WEVFGA
Trigger: TGCTCCAAACACCTCCCACCAGGCCCCACCTCCAGT...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTTCTGTCAAGACTTCATaGTGTTCTGCTAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAISVKTS*CSARDD
Trigger: GTCATCCCTAGCAGAACATCATGAAGTCTTGACAGA...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCATCCAAGAAAAGAAGTaGTCGGTCAACAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTAIQEKK*SVNRLS
Trigger: AGAAAGTCTGTTGACCGATCACTTCTTTTCTTGGAT...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGCTTCTGAAGAACCTCTaGCTCTTCCTGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKLLKNL*LFLQPQ
Trigger: CTGCGGCTGCAGGAAGAGTCAGAGGTTCTTCAGAAG...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TGTCCAAGTGAACACATTGAGAATGAATCTTCACAAGAGATAGGTCTTCAGTTAGGCTGTCTCTCGTGCTaGCCTCAGCCTCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: CPSEHIENESSQEIGLQLGCLSC*PQPLFH
Trigger: ATGGAAGAGAGGCTGAGGTCAGCACGAGAGACAGCC...TAACTGAAGACCTATCTCTTGTGAAGATTCATTCTCAATGTGTTCACTTGGACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTACACAAGAGCCATTTCTaGTTGGCTGCACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLHKSHF*LAALPG
Trigger: CCCTGGCAGTGCAGCCAATCAGAAATGGCTCTTGTG...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR TCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGCCTGCTTTTGTCATGTaGTGTGCCTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQPAFVM*CACSPF
Trigger: GAAGGGGGAGCAGGCACATCACATGACAAAAGCAGG...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTCCTTTTTATGGAAGTTaGTTCCTTACAAGATACTTC +
Preference number: 4 (lower is better)
Translates to: LAALPGQGGRQKYPEESPPFYGS*FLTRYF
Trigger: GAAGTATCTTGTAAGGAAGCAACTTCCATAAAAAGG...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp CCCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCAAAATATCTCTACTGTTaGCTGTCTCCCAGGATGACA +
Preference number: 4 (lower is better)
Translates to: PSNQPDFFSNQQAYVQSPKYLYC*LSPRMT
Trigger: TGTCATCCTGGGAGACAGGCAACAGTAGAGATATTT...TGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCTCCATAAGTACCCCTTaGCATTCATGGAAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTASISTP*HSWKSY
Trigger: ATAACTCTTCCATGAATGGCAAGGGGTACTTATGGA...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTAGCCTCCAGGGTTGTTaGATTTCCTTGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAISLQGC*ISLKTI
Trigger: GATGGTTTTCAAGGAAATCCAACAACCCTGGAGGCT...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CATGAATTTCATATGGATTCTGGAATATTTACCACTACTCCCCTAACGATGCATCGGCCAGCAGCTCATTaGTCACCAGCAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: HEFHMDSGIFTTTPLTMHRPAAH*SPADGG
Trigger: TCCACCATCTGCTGGTGACCAATGAGCTGCTGGCCG...ATGCATCGTTAGGGGAGTAGTGGTAAATATTCCAGAATCCATATGAAATTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCCCTCATGTGGGCAGTTTaGTACAAAGATTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: AHSSHTISPQASIQFMGPLMWAV*YKDSLF
Trigger: AAATAAAGAATCTTTGTACCAAACTGCCCACATGAG...GGGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTCTCTTCACCCTCATGTaGGCAGTTTGGTACAAAGAT +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAILFTLM*AVWYKD
Trigger: ATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAG...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp TGCCTGTGGATGAGCTCTTTCAACTGTGCCAGTTTGTCACTTTTTAGTGCTTCCCCTCAATCCAATTCATaGGTCCCTCAGAATCTCATC +
Preference number: 4 (lower is better)
Translates to: CLWMSSFNCASLSLFSASPQSNS*VPQNLI
Trigger: GATGAGATTCTGAGGGACCCATGAATTGGATTGAGG...GGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAAAGAGCTCATCCACAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR CCA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGCATGAACCCAGGAGGTaGAGGTTGCATAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKHEPRR*RLHRAE
Trigger: CTCGGCTCTATGCAACCTCCACCTCCTGGGTTCATG...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTATGTAATCCCCAATACTaGAGGTGGGGCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLCNPQY*RWGLVG
Trigger: TCCCACCAGGCCCCACCTCCAGTATTGGGGATTACA...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTGGAGCAGTACAAGAGTaGTTCTGGCATGCCTATAAA +
Preference number: 4 (lower is better)
Translates to: LKPARFLLKSTGICPEPIGAVQE*FWHAYK
Trigger: TTTATAGGCATGCCAGAATCACTCTTGTACTGCTCC...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATGGTCAACAGACTTTCTaGCCCTTTTTATGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHGQQTF*PFLWKL
Trigger: CAACTTCCATAAAAAGGGTCAGAAAGTCTGTTGACC...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTGTTGTTGGATTTCCTTaGAAACCATCCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIVVGFP*KPSRRK
Trigger: CTTCCTTCTGGATGGTTTTCAAGGAAATCCAACAAC...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TGTCCAAGTGAACACATTGAGAATGAATCTTCACAAGAGATAGGTCTTCAGTTACCTGCTTTTGTCATGTaGTGTGCCTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CPSEHIENESSQEIGLQLPAFVM*CACSPF
Trigger: GAAGGGGGAGCAGGCACATCACATGACAAAAGCAGG...TAACTGAAGACCTATCTCTTGTGAAGATTCATTCTCAATGTGTTCACTTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTTCACTACCACGTGTTaGAAAATTCTCTGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHFTTTC*KILCPK
Trigger: TTTGGGGCAGAGAATTTTGCAACACGTGGTAGTGAA...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATAAATATCTCTACTGTTaGCTGTCTCCCAGGATGACA +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHKYLYC*LSPRMT
Trigger: TGTCATCCTGGGAGACAGGCAACAGTAGAGATATTT...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGGCACTGGAACCAGTCTaGCTGAAGGGCCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQALEPV*LKGLLN
Trigger: ATTCAGAAGGCCCTTCAGCCAGACTGGTTCCAGTGC...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CTCAGTGTGAAGAGTGAGACTTGTATTTGCAAGATCTCAAGATGCTTGCCTGTGCTCTTCACCCTCATGTaGGCAGTTTGGTACAAAGAT +
Preference number: 4 (lower is better)
Translates to: LSVKSETCICKISRCLPVLFTLM*AVWYKD
Trigger: ATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAG...CACAGGCAAGCATCTTGAGATCTTGCAAATACAAGTCTCACTCTTCACACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
3UTR CAA 72 bp TATAATTTGACTATTTGTTCCCGCCCAAACCTCAAGTaGAAATGTAATCCCCAATACTGGAGGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: YNLTICSRPNLK*KCNPQYWRWGL
Trigger: CAGGCCCCACCTCCAGTATTGGGGATTACATTTCAACTTGAGGTTTGGGCGGGAACAAATAGTCAAATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTATATTATGCAGCGTGTaGTGGGTGAGGTGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLILCSV*WVRCGA
Trigger: CGCCCCACACCTCACCCATCACACGCTGCATAATAT...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATCCTTCTGAATTGCCATaGACTTGGAAACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHPSELP*TWKQSF
Trigger: AAATGACTGTTTCCAAGTTCATGGCAATTCAGAAGG...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATCTTCAATCACTCCAATaGTCACACTCTTCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PQTSQISSQINRHMSRAHLQSLQ*SHSSEE
Trigger: TTCTTCAGAAGAGTGTGATCATTGGAGTGATTGAAG...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGGCTGGTAATCAAAACTaGAAGTCAGGGCACATCCCC +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQAGNQN*KSGHIP
Trigger: GGGGATGTGCCCTGACTTTCAGTTTTGATTACCAGC...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAATGCTTGCCTGTGGATaGGCTCTTTCAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLMLACG*ALSTVP
Trigger: TGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCAT...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGAATCACTGCCTCCAGTaGAGAGCCAATCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQNHCLQ*RANQGV
Trigger: TACTCCCTGATTGGCTCTGCACTGGAGGCAGTGATT...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTGGGCTGACTGGATCGTaGAGGGAGCAGTACAAGAGT +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLGLTGS*REQYKS
Trigger: ACTCTTGTACTGCTCCCTGCACGATCCAGTCAGCCC...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCCCTTTTTATGGAAGTTaGTTCCTTACAAGATACTTC +
Preference number: 4 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTAPFYGS*FLTRYF
Trigger: GAAGTATCTTGTAAGGAAGCAACTTCCATAAAAAGG...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTAGAGCCATTTCTGATTaGCTGCACTGCCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLRAISD*LHCQGR
Trigger: CCTGCCCTGGCAGTGCAGCCAATCAGAAATGGCTCT...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGCCAGAAGAAAGCAGCTaGGCAAACTTCTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKPEESS*ANFWLL
Trigger: TAGGAGCCAGAAGTTTGCCCAGCTGCTTTCTTCTGG...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
3UTR CAA 72 bp AAGAGTGAGACTTGTATTTGCAAGATCTCAAGATGCTaGCCTGTGGATGAGCTCTTTCAACTGTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: KSETCICKISRC*PVDELFQLCQF
Trigger: AAACTGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCAAATACAAGTCTCACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR TCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGAATGCTTGCCTGTGGATaGGCTCTTTCAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRMLACG*ALSTVP
Trigger: TGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCAT...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp TGTCCAAGTGAACACATTGAGAATGAATCTTCACAAGAGATAGGTCTTCAGTTAGTGACCTGGGACAGATaGTCATCACAGGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: CPSEHIENESSQEIGLQLVTWDR*SSQEQC
Trigger: ACATTGCTCCTGTGATGATCATCTGTCCCAGGTCAC...TAACTGAAGACCTATCTCTTGTGAAGATTCATTCTCAATGTGTTCACTTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGAGTGACCTGGGACAGATaGTCATCACAGGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRVTWDR*SSQEQC
Trigger: ACATTGCTCCTGTGATGATCATCTGTCCCAGGTCAC...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGTCCTGGCTCATACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQSWLIR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTATGAGCCAGGA...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGCCCCTTGGTGATAAGTaGCTTCTTGCTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQPLGDK*LLALSL
Trigger: AAGACTCAGAGCAAGAAGTCACTTATCACCAAGGGG...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTCTGCCCCAAAATCACTaGCTCCAGTGCAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLLPQNH*LQCRAN
Trigger: ATTGGCTCTGCACTGGAGGCAGTGATTTTGGGGCAG...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTACCTCTGACTCTTCCTaGAGCCGCAGACAGTTATCC +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLTSDSS*SRRQLS
Trigger: GGATAACTGTCTGCGGCTGCAGGAAGAGTCAGAGGT...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp CTTTCAACTGTGCCAGTTTGTCACTTTTTAGTGCTTCCCGGATGTAATGGAAAACAGATGGTGGATGTATaGCCGAGTGTGATTCTTACA +
Preference number: 4 (lower is better)
Translates to: LSTVPVCHFLVLPGCNGKQMVDV*PSVILT
Trigger: TGTAAGAATCACACTCGGGCATACATCCACCATCTG...TTTTCCATTACATCCGGGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR CCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTGGAATATCCATGGTGTaGTCCCCTGTTTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLGISMV*SPVLPR
Trigger: CCTGGGCAAAACAGGGGACCACACCATGGATATTCC...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp CATGAATTTCATATGGATTCTGGAATATTTACCACTACTCCCCTAACGATGCATACTGCCAGGGCAGGGTaGAAGACAAAAGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: HEFHMDSGIFTTTPLTMHTARAG*KTKVSR
Trigger: TCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGT...ATGCATCGTTAGGGGAGTAGTGGTAAATATTCCAGAATCCATATGAAATTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp TGTCCAAGTGAACACATTGAGAATGAATCTTCACAAGAGATAGGTCTTCAGTTAACTGCCAGGGCAGGGTaGAAGACAAAAGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: CPSEHIENESSQEIGLQLTARAG*KTKVSR
Trigger: TCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGT...TAACTGAAGACCTATCTCTTGTGAAGATTCATTCTCAATGTGTTCACTTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGTCTGTCAAGACTTCATaGTGTTCTGCTAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQSVKTS*CSARDD
Trigger: GTCATCCCTAGCAGAACATCATGAAGTCTTGACAGA...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGATCCAGAAGAGTCTCCTaGGAGTATGAGGGTGAACTA +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRSRRVS*EYEGEL
Trigger: TAGTTCACCCTCATACTCTCAGGAGACTCTTCTGGA...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATTATGGGTAATATAATTTaGCTATTTGTTCCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: LKPARFLLKSTGICPEPIMGNII*LFVPAQ
Trigger: TTGGGCGGGAACAAATAGTCAAATTATATTACCCAT...AATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTATGTTGCAAAATTCTCTaGCCCAAAATCACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLCCKIL*PKITAS
Trigger: GGAGGCAGTGATTTTGGGGCAGAGAATTTTGCAACA...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTACAGATGGTGGATGTATaGCCGAGTGTGATTCTTACA +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLQMVDV*PSVILT
Trigger: TGTAAGAATCACACTCGGGCATACATCCACCATCTG...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGCAGATGGTGGATGTATaGCCGAGTGTGATTCTTACA +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQQMVDV*PSVILT
Trigger: TGTAAGAATCACACTCGGGCATACATCCACCATCTG...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTAGCCTGGAATATCCATaGTGTGGTCCCCTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLSLEYP*CGPLFC
Trigger: GCAAAACAGGGGACCACACCATGGATATTCCAGGCT...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTACAAGATGCTTGCCTGTaGATGAGCTCTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLQDACL*MSSFNC
Trigger: ACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTG...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGCCTCAATCCAATTCATaGGTCCCTCAGAATCTCATC +
Preference number: 4 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKPQSNS*VPQNLI
Trigger: GATGAGATTCTGAGGGACCCATGAATTGGATTGAGG...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CCA 90 bp TGTCCAAGTGAACACATTGAGAATGAATCTTCACAAGAGATAGGTCTTCAGTTAACCCCTTGCCATTCATaGAAGAGTTATGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: CPSEHIENESSQEIGLQLTPCHS*KSYEDA
Trigger: GGCATCCTCATAACTCTTCCATGAATGGCAAGGGGT...TAACTGAAGACCTATCTCTTGTGAAGATTCATTCTCAATGTGTTCACTTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGAAGCCTCAGGATCTCCTaGTACCAATTCAATAACCAC +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRSLRIS*YQFNNH
Trigger: GTGGTTATTGAATTGGTATCAGGAGATCCTGAGGCT...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTATCTGAGTCTTGTTCCTaGTTTTGTCATGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLSESCS*FCHVMC
Trigger: GCACATCACATGACAAAAGCAGGAACAAGACTCAGA...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGAAGCCTCCAGGGTTGTTaGATTTCCTTGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRSLQGC*ISLKTI
Trigger: GATGGTTTTCAAGGAAATCCAACAACCCTGGAGGCT...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTACCTTCTGAATTGCCATaGACTTGGAAACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLPSELP*TWKQSF
Trigger: AAATGACTGTTTCCAAGTTCATGGCAATTCAGAAGG...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CTCAAATGTGCTAATAAGAAAAAGACCCAGGAAACTGAACGATATTGGACACAGCTTCAATCACTCCAATaGTCACACTCTTCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LKCANKKKTQETERYWTQLQSLQ*SHSSEE
Trigger: TTCTTCAGAAGAGTGTGATCATTGGAGTGATTGAAG...CTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTTTTCTTATTAGCACATTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp CATGAATTTCATATGGATTCTGGAATATTTACCACTACTCCCCTAACGATGCATAAAGACCCAGGAAACTaGACGATATTGGACACAGTT +
Preference number: 4 (lower is better)
Translates to: HEFHMDSGIFTTTPLTMHKDPGN*TILDTV
Trigger: AACTGTGTCCAATATCGTTCAGTTTCCTGGGTCTTT...ATGCATCGTTAGGGGAGTAGTGGTAAATATTCCAGAATCCATATGAAATTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR TCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGACGCTCACACGATTTATaGGAATCTGAACTTACAGAA +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRRSHDL*ESELTE
Trigger: TTCTGTAAGTTCAGATTCTCATAAATCGTGTGAGCG...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281273.8
CDS-3UTR GCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTAAGGGCCTTCTGAATTaGCATGAACTTGGAAACAGT +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLKGLLN*HELGNS
Trigger: ACTGTTTCCAAGTTCATGGCAATTCAGAAGGCCCTT...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGTGAGACTTGTATTTaGAAGATCTCAAGATGCTTG +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLSETCI*KISRCL
Trigger: CAAGCATCTTGAGATCTTGCAAATACAAGTCTCACT...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGAGTGAGACTTGTATTTaGAAGATCTCAAGATGCTTG +
Preference number: 4 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKSETCI*KISRCL
Trigger: CAAGCATCTTGAGATCTTGCAAATACAAGTCTCACT...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR GCA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTTCTGAGTCTTGTTCCTaGTTTTGTCATGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLSESCS*FCHVMC
Trigger: GCACATCACATGACAAAAGCAGGAACAAGACTCAGA...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp TGTCCAAGTGAACACATTGAGAATGAATCTTCACAAGAGATAGGTCTTCAGTTATCCATAAGTACCCCTTaGCATTCATGGAAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: CPSEHIENESSQEIGLQLSISTP*HSWKSY
Trigger: ATAACTCTTCCATGAATGGCAAGGGGTACTTATGGA...TAACTGAAGACCTATCTCTTGTGAAGATTCATTCTCAATGTGTTCACTTGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGACATTCCTATCCATTATaGCTGTCCCTATTTATTCAG +
Preference number: 4 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRHSYPL*LSLFIQ
Trigger: CTGAATAAATAGGGACAGGCATAATGGATAGGAATG...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR GCA 90 bp CATGAATTTCATATGGATTCTGGAATATTTACCACTACTCCCCTAACGATGCATCATTCCTATCCATTATaGCTGTCCCTATTTATTCAG +
Preference number: 4 (lower is better)
Translates to: HEFHMDSGIFTTTPLTMHHSYPL*LSLFIQ
Trigger: CTGAATAAATAGGGACAGGCATAATGGATAGGAATG...ATGCATCGTTAGGGGAGTAGTGGTAAATATTCCAGAATCCATATGAAATTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CCA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTACTCATGTGGGCAGTTTaGTACAAAGATTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: EEISSPSCGQFGTKILYLLMWAV*YKDSLF
Trigger: AAATAAAGAATCTTTGTACCAAACTGCCCACATGAG...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS TCA 90 bp GAGCCATGGCAGGAACCCCGTGGATATTATGCAGCGTGTGATGGGTaGGGTGTGGGGCGGAGCCAGTCTTGGTATACAGAAGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: EPWQEPRGYYAACDG*GVGRSQSWYTEGSL
Trigger: CAGGCTGCCTTCTGTATACCAAGACTGGCTCCGCCCCACACCTCACCCATCACACGCTGCATAATATCCACGGGGTTCCTGCCATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281273.8
ENST00000460163.1
ENST00000466050.5
ENST00000466870.1
ENST00000472599.5
ENST00000482307.1
ENST00000485050.5
ENST00000490183.5
CDS-3UTR CAA 90 bp TGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGCCGGCCAGCAGCTCATaGGTCACCAGCAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: WLHCQGRVEDKSIQKSLLPASSS*VTSRWW
Trigger: CCACCATCTGCTGGTGACCAATGAGCTGCTGGCCGG...CAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS CCA 90 bp GGCAGGAACCCCGTGGATATTATGCAGCGTGTGATGGGTGAGGTGTaGGGCGGAGCCAGTCTTGGTATACAGAAGGCAGCCTGGAATATC +
Preference number: 5 (lower is better)
Translates to: GRNPVDIMQRVMGEV*GGASLGIQKAAWNI
Trigger: GATATTCCAGGCTGCCTTCTGTATACCAAGACTGGCTCCGCCCCACACCTCACCCATCACACGCTGCATAATATCCACGGGGTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281273.8
ENST00000460163.1
ENST00000466050.5
ENST00000466870.1
ENST00000472599.5
ENST00000482307.1
ENST00000485050.5
ENST00000490183.5
CDS-3UTR CAA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTCCACCCACAGGCCGCTaGGCTGTCTCTCGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIPPTGR*AVSRAD
Trigger: GTCAGCACGAGAGACAGCCAAGCGGCCTGTGGGTGG...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp AGCCCATTCGTCTCACACCATTTCCCCTCAAGCCTCAATCCAATTCATGGGTCCGATATGAGCCTTGGCTaGTCCTCCGGCAGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: SPFVSHHFPSSLNPIHGSDMSLG*SSGSSA
Trigger: TGCAGAGCTGCCGGAGGACAAGCCAAGGCTCATATC...GGACCCATGAATTGGATTGAGGCTTGAGGGGAAATGGTGTGAGACGAATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATCCGGCCAGCAGCTCATaGGTCACCAGCAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: PQTSQISSQINRHMSRAHPASSS*VTSRWW
Trigger: CCACCATCTGCTGGTGACCAATGAGCTGCTGGCCGG...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS TCA 90 bp GGGGCCCTTTTATCTCAGAGGTGTCGGCGACGCTCACACGATTTATaGGAATCTGAACTTACAGAAACCAATCCACCAGGACACCCTGCC +
Preference number: 5 (lower is better)
Translates to: GALLSQRCRRRSHDL*ESELTETNPPGHPA
Trigger: GGCAGGGTGTCCTGGTGGATTGGTTTCTGTAAGTTCAGATTCTCATAAATCGTGTGAGCGTCGCCGACACCTCTGAGATAAAAGGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000488665.1
ENST00000490183.5
CDS CCA 90 bp AAAAGCCTCCCTTGGGAAGCAGTGGTTGTATGCTCAGTCCTCCCCTaGGAAGAACAACAACAGGCAACTTGCAGGGTTCCCTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: KSLPWEAVVVCSVLP*EEQQQATCRVPFRM
Trigger: CATTCTGAAGGGAACCCTGCAAGTTGCCTGTTGTTGTTCTTCCCAGGGGAGGACTGAGCATACAACCACTGCTTCCCAAGGGAGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472599.5
CDS-3UTR CAA 90 bp CCTCAAACCAGCCAGATTTCTTCTCAAATCAACAGGCATATGTCCAGAGCCCATGGGGCGGAGCCAGTCTaGGTATACAGAAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PQTSQISSQINRHMSRAHGAEPV*VYRRQP
Trigger: AGGCTGCCTTCTGTATACCAAGACTGGCTCCGCCCC...ATGGGCTCTGGACATATGCCTGTTGATTTGAGAAGAAATCTGGCTGGTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp TTCCAGGGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCGATATGAGCCTTGGCTaGTCCTCCGGCAGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: FQGYPSPVKSQEPFLIGCDMSLG*SSGSSA
Trigger: TGCAGAGCTGCCGGAGGACAAGCCAAGGCTCATATC...GCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS TCA 90 bp AGAGGCACTGGAACCAGTCTGGCTGAAGGGCCTTCTGAATTGCCATaGACTTGGAAACAGTCATTTCCACTCGTCCTGCAACACTCCACA +
Preference number: 5 (lower is better)
Translates to: RGTGTSLAEGPSELP*TWKQSFPLVLQHST
Trigger: TGTGGAGTGTTGCAGGACGAGTGGAAATGACTGTTTCCAAGTTCATGGCAATTCAGAAGGCCCTTCAGCCAGACTGGTTCCAGTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281273.8
ENST00000466050.5
ENST00000467703.1
ENST00000472599.5
ENST00000479882.5
ENST00000485050.5
ENST00000493014.1
CDS GCA 90 bp CCCTCAAACTCCTCACAGTTCACTACCACGTGTTGCAAAATTCTCTaGCCCAAAATCACTGCCTCCAGTGCAGAGCCAATCAGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: PSNSSQFTTTCCKIL*PKITASSAEPIREY
Trigger: GTACTCCCTGATTGGCTCTGCACTGGAGGCAGTGATTTTGGGGCAGAGAATTTTGCAACACGTGGTAGTGAACTGTGAGGAGTTTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp TTGGCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGTCTTGTTCCTGCTTTaGTCATGTGATGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LAALPGQGGRQKYPEESPVLFLL*SCDVPA
Trigger: AGCAGGCACATCACATGACAAAAGCAGGAACAAGAC...AGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp GCTGCACTGCCAGGGCAGGGTGGAAGACAAAAGTATCCAGAAGAGTCTCCTGAGTTCCATAAGTACCCCTaGCCATTCATGGAAGAGTTA +
Preference number: 5 (lower is better)
Translates to: AALPGQGGRQKYPEESPEFHKYP*PFMEEL
Trigger: TAACTCTTCCATGAATGGCAAGGGGTACTTATGGAA...CTCAGGAGACTCTTCTGGATACTTTTGTCTTCCACCCTGCCCTGGCAGTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGACCACCCACAGGCCGCTaGGCTGTCTCTCGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRPPTGR*AVSRAD
Trigger: GTCAGCACGAGAGACAGCCAAGCGGCCTGTGGGTGG...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS TCA 90 bp AATTATCCTCTACTCTACATTCTGAAATCAAGGCCAGGACAGCCTTaGTGGAAACTCCCCTTACAGTCTGCCTCAGCACCTCAGCAGACT +
Preference number: 5 (lower is better)
Translates to: NYPLLYILKSRPGQP*WKLPLQSASAPQQT
Trigger: AGTCTGCTGAGGTGCTGAGGCAGACTGTAAGGGGAGTTTCCATCAAGGCTGTCCTGGCCTTGATTTCAGAATGTAGAGTAGAGGATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS CCA 90 bp TTCCTTACAAGATACTTCTCCATCGGAGAGGCACTGGAACCAGTCTaGCTGAAGGGCCTTCTGAATTGCCATGAACTTGGAAACAGTCAT +
Preference number: 5 (lower is better)
Translates to: FLTRYFSIGEALEPV*LKGLLNCHELGNSH
Trigger: ATGACTGTTTCCAAGTTCATGGCAATTCAGAAGGCCCTTCAGCCAGACTGGTTCCAGTGCCTCTCCGATGGAGAAGTATCTTGTAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281273.8
ENST00000466050.5
ENST00000467703.1
ENST00000472599.5
ENST00000479882.5
ENST00000485050.5
ENST00000493014.1
CDS-3UTR CAA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAGGGGCGGAGCCAGTCTaGGTATACAGAAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: EEISSPSCGQFGTKILYLGAEPV*VYRRQP
Trigger: AGGCTGCCTTCTGTATACCAAGACTGGCTCCGCCCC...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp GCTCTCAAATATCTCTACTGTTGCCTGTCTCCCAGGATGACAACTAGGGCTATTCAGACACAGACTTGTTaGTTACATAACCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: ALKYLYCCLSPRMTTRAIQTQTC*LHNQPG
Trigger: GCCCGGCTGGTTATGTAACAAACAAGTCTGTGTCTG...AATAGCCCTAGTTGTCATCCTGGGAGACAGGCAACAGTAGAGATATTTGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp GGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCACTGCCTTCAACTGTGCCAGTTaGTCACTTTTTAGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GYPSPVKSQEPFLIGCTAFNCAS*SLFSAS
Trigger: GGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAA...GGCAGTGCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CAA 90 bp TTCCAGGGATATCCAAGCCCAGTTAAGTCACAAGAGCCATTTCTGATTGGCTGCCCTCATGTGGGCAGTTaGGTACAAAGATTCTTTATT +
Preference number: 5 (lower is better)
Translates to: FQGYPSPVKSQEPFLIGCPHVGS*VQRFFI
Trigger: AATAAAGAATCTTTGTACCAAACTGCCCACATGAGG...GCAGCCAATCAGAAATGGCTCTTGTGACTTAACTGGGCTTGGATATCCCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS TCA 90 bp TTTGTTGTAGTAGTGTCTCTTCAGGATTCGGCTGGTAATCAAAACTaGAAGTCAGGGCACATCCCCGCTCTGTTACTTGATAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: FVVVVSLQDSAGNQN*KSGHIPALLLDKGK
Trigger: TTTTCCCTTATCAAGTAACAGAGCGGGGATGTGCCCTGACTTTCAGTTTTGATTACCAGCCGAATCCTGAAGAGACACTACTACAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281273.8
ENST00000479882.5
ENST00000483272.1
ENST00000485050.5
ENST00000493014.1
CDS CCA 90 bp TCTAAATCTTTACTCTGCTTTATAAGCCCATTTATCACCCCTAAATaGGCTGTCTCTGGAAACACCTCGGCTAAGCCAATAAGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SKSLLCFISPFITPK*AVSGNTSAKPISLD
Trigger: ATCCAGGCTTATTGGCTTAGCCGAGGTGTTTCCAGAGACAGCCCATTTAGGGGTGATAAATGGGCTTATAAAGCAGAGTAAAGATTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488665.1
CDS-3UTR CAA 90 bp AGAGTGAGACTTGTATTTGCAAGATCTCAAGATGCTTGCCTGTGGATGAGCTCTTTCAACTGTGCCAGTTaGTCACTTTTTAGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RVRLVFARSQDACLWMSSFNCAS*SLFSAS
Trigger: GGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAA...AGAGCTCATCCACAGGCAAGCATCTTGAGATCTTGCAAATACAAGTCTCACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462966.1
CDS-3UTR CAA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAGTTCACTACCACGTGTaGCAAAATTCTCTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: EEISSPSCGQFGTKILYLVHYHV*QNSLPQ
Trigger: TTGGGGCAGAGAATTTTGCAACACGTGGTAGTGAAC...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS TCA 90 bp AAAATGTCTAGAAATACTGGTGCTGAAGTGTTATGTGCACCAGAGTaGAACAAGTACAGGAGAGGGAGCAATGAACACAAAAGAACTAGG +
Preference number: 5 (lower is better)
Translates to: KMSRNTGAEVLCAPE*NKYRRGSNEHKRTR
Trigger: CCTAGTTCTTTTGTGTTCATTGCTCCCTCTCCTGTACTTGTTTCACTCTGGTGCACATAACACTTCAGCACCAGTATTTCTAGACATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS CCA 90 bp CAACATGACACTGAAAGGAAATGCTCACTGGAGAATTTTGGATTTTaGACTTTCAAATTAGGGATGCCCAACCAGTACGTACTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: QHDTERKCSLENFGF*TFKLGMPNQYVLCK
Trigger: TTTGCAGAGTACGTACTGGTTGGGCATCCCTAATTTGAAAGTCCAAAATCCAAAATTCTCCAGTGAGCATTTCCTTTCAGTGTCATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS-3UTR CAA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGAGTTCACTACCACGTGTaGCAAAATTCTCTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRVHYHV*QNSLPQ
Trigger: TTGGGGCAGAGAATTTTGCAACACGTGGTAGTGAAC...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp GAGGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTACGCCCAAACCTCAAGTaGAAATGTAATCCCCAATAC +
Preference number: 5 (lower is better)
Translates to: EEISSPSCGQFGTKILYLRPNLK*KCNPQY
Trigger: GTATTGGGGATTACATTTCAACTTGAGGTTTGGGCG...TAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS TCA 90 bp GCAGACAGTTATCCAAGAAAAGAAGTGATCGGTCAACAGACTTTCTaGCCCTTTTTATGGAAGTTGCTTCCTTACAAGATACTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: ADSYPRKEVIGQQTF*PFLWKLLPYKILLH
Trigger: ATGGAGAAGTATCTTGTAAGGAAGCAACTTCCATAAAAAGGGTCAGAAAGTCTGTTGACCGATCACTTCTTTTCTTGGATAACTGTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281273.8
ENST00000467703.1
ENST00000479882.5
ENST00000485050.5
ENST00000493014.1
CDS-3UTR CAA 90 bp GGAAATCTCTTCACCCTCATGTGGGCAGTTTGGTACAAAGATTCTTTATTTAAGTTCAACTGTGCCAGTTaGTCACTTTTTAGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GNLFTLMWAVWYKDSLFKFNCAS*SLFSAS
Trigger: GGAAGCACTAAAAAGTGACAAACTGGCACAGTTGAA...CTTAAATAAAGAATCTTTGTACCAAACTGCCCACATGAGGGTGAAGAGATTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000462966.1
ENST00000485050.5
CDS-3UTR CAA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTGTCTTGTTCCTGCTTTaGTCATGTGATGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLVLFLL*SCDVPA
Trigger: AGCAGGCACATCACATGACAAAAGCAGGAACAAGAC...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp GTTATGAGGATGCCCATGAATTTATTCATGGACACTCCCATACTAAGAAAAAGACCTCATGTGGGCAGTTaGGTACAAAGATTCTTTATT +
Preference number: 5 (lower is better)
Translates to: VMRMPMNLFMDTPILRKRPHVGS*VQRFFI
Trigger: AATAAAGAATCTTTGTACCAAACTGCCCACATGAGG...TCTTTTTCTTAGTATGGGAGTGTCCATGAATAAATTCATGGGCATCCTCATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp GTTCAATTCTCTCTGATCAATCCAGGTCATTTAAGTCTTTTGAGGAAATCTCTTTTCCATAAGTACCCCTaGCCATTCATGGAAGAGTTA +
Preference number: 5 (lower is better)
Translates to: VQFSLINPGHLSLLRKSLFHKYP*PFMEEL
Trigger: TAACTCTTCCATGAATGGCAAGGGGTACTTATGGAA...AAGAGATTTCCTCAAAAGACTTAAATGACCTGGATTGATCAGAGAGAATTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS-3UTR CAA 90 bp TGTCCAAGTGAACACATTGAGAATGAATCTTCACAAGAGATAGGTCTTCAGTTACCCTTTTTATGGAAGTaGCTTCCTTACAAGATACTT +
Preference number: 5 (lower is better)
Translates to: CPSEHIENESSQEIGLQLPFLWK*LPYKIL
Trigger: AAGTATCTTGTAAGGAAGCAACTTCCATAAAAAGGG...TAACTGAAGACCTATCTCTTGTGAAGATTCATTCTCAATGTGTTCACTTGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281273.8
ENST00000485050.5
CDS CCA 72 bp CATCCCTTGAGGCCAGCCTGTGTCCTAACCGAACACTaGCCTTGGCTTGTCCTCCGGCAGCTCTGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: HPLRPACVLTEH*PWLVLRQLCSD
Trigger: GTCACTGCAGAGCTGCCGGAGGACAAGCCAAGGCCAGTGTTCGGTTAGGACACAGGCTGGCCTCAAGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS TCA 72 bp GCCATGGCAGGAACCCCGTGGATATTATGCAGCGTGTaGTGGGTGAGGTGTGGGGCGGAGCCAGTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: AMAGTPWILCSV*WVRCGAEPVLV
Trigger: TACCAAGACTGGCTCCGCCCCACACCTCACCCATCACACGCTGCATAATATCCACGGGGTTCCTGCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281273.8
ENST00000460163.1
ENST00000466050.5
ENST00000466870.1
ENST00000472599.5
ENST00000482307.1
ENST00000485050.5
ENST00000490183.5
CDS CAA 90 bp GCCATCTCCATGGCCCCAGACCTCCCTAGGCACCTGGCTCAGAGATaGAAGACGGTCCCACCCTCCCATGGGCAGTTCGGAATAAAAACT +
Preference number: 6 (lower is better)
Translates to: AISMAPDLPRHLAQR*KTVPPSHGQFGIKT
Trigger: AGTTTTTATTCCGAACTGCCCATGGGAGGGTGGGACCGTCTTCAATCTCTGAGCCAGGTGCCTAGGGAGGTCTGGGGCCATGGAGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488665.1
CDS CCA 72 bp CCCGTGGATATTATGCAGCGTGTGATGGGTGAGGTGTaGGGCGGAGCCAGTCTTGGTATACAGAAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: PVDIMQRVMGEV*GGASLGIQKAA
Trigger: GGCTGCCTTCTGTATACCAAGACTGGCTCCGCCCCACACCTCACCCATCACACGCTGCATAATATCCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281273.8
ENST00000460163.1
ENST00000466050.5
ENST00000466870.1
ENST00000472599.5
ENST00000482307.1
ENST00000485050.5
ENST00000490183.5
CDS CAA 90 bp GTCTCTGGAAACACCTCGGCTAAGCCAATAAGCCTGGATTTATCTTaGCTCCATGGGCCATCTCCATGGCCCCAGACCTCCCTAGGCACC +
Preference number: 6 (lower is better)
Translates to: VSGNTSAKPISLDLS*LHGPSPWPQTSLGT
Trigger: GGTGCCTAGGGAGGTCTGGGGCCATGGAGATGGCCCATGGAGCAAAGATAAATCCAGGCTTATTGGCTTAGCCGAGGTGTTTCCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488665.1
CDS TCA 72 bp CAGGAACCCCGTGGATATTATGCAGCGTGTGATGGGTaGGGTGTGGGGCGGAGCCAGTCTTGGTATACAGAA +
Preference number: 6 (lower is better)
Translates to: QEPRGYYAACDG*GVGRSQSWYTE
Trigger: TTCTGTATACCAAGACTGGCTCCGCCCCACACCTCACCCATCACACGCTGCATAATATCCACGGGGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281273.8
ENST00000460163.1
ENST00000466050.5
ENST00000466870.1
ENST00000472599.5
ENST00000482307.1
ENST00000485050.5
ENST00000490183.5
CDS CCA 72 bp CCTTGGGAAGCAGTGGTTGTATGCTCAGTCCTCCCCTaGGAAGAACAACAACAGGCAACTTGCAGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: PWEAVVVCSVLP*EEQQQATCRVP
Trigger: GGGAACCCTGCAAGTTGCCTGTTGTTGTTCTTCCCAGGGGAGGACTGAGCATACAACCACTGCTTCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472599.5
CDS GCA 72 bp TGTGGGAAAAGCCTCCCTTGGGAAGCAGTGGTTGTATaGTCAGTCCTCCCCTGGGAAGAACAACAACAGGCA +
Preference number: 6 (lower is better)
Translates to: CGKSLPWEAVVV*SVLPWEEQQQA
Trigger: TGCCTGTTGTTGTTCTTCCCAGGGGAGGACTGAGCATACAACCACTGCTTCCCAAGGGAGGCTTTTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472599.5
CDS CAA 90 bp ACACTATTTAATATACAATCGGCCAGCACTCCTTCCCTGCATCCCTaGAGGCCAGCCTGTGTCCTAACCGAACACTGGCCTTGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: TLFNIQSASTPSLHP*RPACVLTEHWPWLV
Trigger: GACAAGCCAAGGCCAGTGTTCGGTTAGGACACAGGCTGGCCTCAAGGGATGCAGGGAAGGAGTGCTGGCCGATTGTATATTAAATAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS TCA 72 bp GGGGCTGACTGGATCGTGCAGGGAGCAGTACAAGAGTaGTTCTGGCATGCCTATAAACTTTCCAACTCCTTC +
Preference number: 6 (lower is better)
Translates to: GADWIVQGAVQE*FWHAYKLSNSF
Trigger: GAAGGAGTTGGAAAGTTTATAGGCATGCCAGAATCACTCTTGTACTGCTCCCTGCACGATCCAGTCAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281273.8
ENST00000466870.1
ENST00000472599.5
ENST00000482307.1
ENST00000485050.5
CDS CCA 72 bp AGATACTTCTCCATCGGAGAGGCACTGGAACCAGTCTaGCTGAAGGGCCTTCTGAATTGCCATGAACTTGGA +
Preference number: 6 (lower is better)
Translates to: RYFSIGEALEPV*LKGLLNCHELG
Trigger: TCCAAGTTCATGGCAATTCAGAAGGCCCTTCAGCCAGACTGGTTCCAGTGCCTCTCCGATGGAGAAGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281273.8
ENST00000466050.5
ENST00000467703.1
ENST00000472599.5
ENST00000479882.5
ENST00000485050.5
ENST00000493014.1
CDS CCA 72 bp GTCCACTCCTCTTTCAATACACTCGAGCACCTCATCTaGCCGACTAACACCAGATATGAGCCTTGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: VHSSFNTLEHLI*PTNTRYEPWLV
Trigger: GACAAGCCAAGGCTCATATCTGGTGTTAGTCGGCCAGATGAGGTGCTCGAGTGTATTGAAAGAGGAGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281273.8
ENST00000462869.1
ENST00000479882.5
ENST00000485050.5
ENST00000493014.1
CDS TCA 72 bp GGAACCAGTCTGGCTGAAGGGCCTTCTGAATTGCCATaGACTTGGAAACAGTCATTTCCACTCGTCCTGCAA +
Preference number: 6 (lower is better)
Translates to: GTSLAEGPSELP*TWKQSFPLVLQ
Trigger: TTGCAGGACGAGTGGAAATGACTGTTTCCAAGTTCATGGCAATTCAGAAGGCCCTTCAGCCAGACTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000281273.8
ENST00000466050.5
ENST00000467703.1
ENST00000472599.5
ENST00000479882.5
ENST00000485050.5
ENST00000493014.1
CDS TCA 72 bp ATAAGGGATCATCCCAGACAGTGGGATCTGAGCATCTaGGGGATACACCATAGGCTGACTTCCTGGGACAAA +
Preference number: 6 (lower is better)
Translates to: IRDHPRQWDLSI*GIHHRLTSWDK
Trigger: TTTGTCCCAGGAAGTCAGCCTATGGTGTATCCCTCAGATGCTCAGATCCCACTGTCTGGGATGATCCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466870.1
CDS TCA 72 bp CTACTCTACATTCTGAAATCAAGGCCAGGACAGCCTTaGTGGAAACTCCCCTTACAGTCTGCCTCAGCACCT +
Preference number: 6 (lower is better)
Translates to: LLYILKSRPGQP*WKLPLQSASAP
Trigger: AGGTGCTGAGGCAGACTGTAAGGGGAGTTTCCATCAAGGCTGTCCTGGCCTTGATTTCAGAATGTAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS CAA 90 bp CAATTATCCTCTACTCTACATTCTGAAATCAAGGCCAGGACAGCCTaGATGGAAACTCCCCTTACAGTCTGCCTCAGCACCTCAGCAGAC +
Preference number: 6 (lower is better)
Translates to: QLSSTLHSEIKARTA*METPLTVCLSTSAD
Trigger: GTCTGCTGAGGTGCTGAGGCAGACTGTAAGGGGAGTTTCCATCAAGGCTGTCCTGGCCTTGATTTCAGAATGTAGAGTAGAGGATAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS TCA 72 bp GTAGTGTCTCTTCAGGATTCGGCTGGTAATCAAAACTaGAAGTCAGGGCACATCCCCGCTCTGTTACTTGAT +
Preference number: 6 (lower is better)
Translates to: VVSLQDSAGNQN*KSGHIPALLLD
Trigger: ATCAAGTAACAGAGCGGGGATGTGCCCTGACTTTCAGTTTTGATTACCAGCCGAATCCTGAAGAGACACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281273.8
ENST00000479882.5
ENST00000483272.1
ENST00000485050.5
ENST00000493014.1
CDS TCA 72 bp ATCGTGTCTCTTCAGGATTCGGCTGGTAATCAAAACTaGAAGTCAGGGCACATCCCCGCTCTGTTACTTGAT +
Preference number: 6 (lower is better)
Translates to: IVSLQDSAGNQN*KSGHIPALLLD
Trigger: ATCAAGTAACAGAGCGGGGATGTGCCCTGACTTTCAGTTTTGATTACCAGCCGAATCCTGAAGAGACACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462869.1
CDS CCA 72 bp GTCCACTCCTCTTTCAATACACTCGAGCACCTCATCTaGCCGACTAACACCAGATATGAGCCTGTAAAAGTA +
Preference number: 6 (lower is better)
Translates to: VHSSFNTLEHLI*PTNTRYEPVKV
Trigger: TACTTTTACAGGCTCATATCTGGTGTTAGTCGGCCAGATGAGGTGCTCGAGTGTATTGAAAGAGGAGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483272.1
CDS TCA 72 bp TTATCTCAGAGGTGTCGGCGACGCTCACACGATTTATaGGAATCTGAACTTACAGAAACCAATCCACCAGGA +
Preference number: 6 (lower is better)
Translates to: LSQRCRRRSHDL*ESELTETNPPG
Trigger: TCCTGGTGGATTGGTTTCTGTAAGTTCAGATTCTCATAAATCGTGTGAGCGTCGCCGACACCTCTGAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281273.8
ENST00000488665.1
ENST00000490183.5
CDS CAA 72 bp GGCATTCTGAGACTATTAATGGCACTCGGCCAGGTTTaGCCACTCCATGAAAACAGATGTGGAGATGTACTA +
Preference number: 6 (lower is better)
Translates to: GILRLLMALGQV*PLHENRCGDVL
Trigger: TAGTACATCTCCACATCTGTTTTCATGGAGTGGCAAAACCTGGCCGAGTGCCATTAATAGTCTCAGAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS TCA 72 bp TCTCTTCCATCACATCTCCACCTTCAATCACTCCAATaGTCACACTCTTCTGAAGAACCTCTGACTCTTCCT +
Preference number: 6 (lower is better)
Translates to: SLPSHLHLQSLQ*SHSSEEPLTLP
Trigger: AGGAAGAGTCAGAGGTTCTTCAGAAGAGTGTGATCATTGGAGTGATTGAAGGTGGAGATGTGATGGAAGAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281273.8
ENST00000467703.1
ENST00000479882.5
ENST00000485050.5
ENST00000493014.1
CDS CCA 72 bp TTACTCTGCTTTATAAGCCCATTTATCACCCCTAAATaGGCTGTCTCTGGAAACACCTCGGCTAAGCCAATA +
Preference number: 6 (lower is better)
Translates to: LLCFISPFITPK*AVSGNTSAKPI
Trigger: TATTGGCTTAGCCGAGGTGTTTCCAGAGACAGCCCATTTAGGGGTGATAAATGGGCTTATAAAGCAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488665.1
CDS TCA 72 bp CCTACTAGTGTTGTCAGTCCCCTCAATTTCAAAAATTaGCACCACTCACTACCAGCCTCAAATCTAAGAGCT +
Preference number: 6 (lower is better)
Translates to: PTSVVSPLNFKN*HHSLPASNLRA
Trigger: AGCTCTTAGATTTGAGGCTGGTAGTGAGTGGTGTCAATTTTTGAAATTGAGGGGACTGACAACACTAGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS TCA 72 bp AGAAATACTGGTGCTGAAGTGTTATGTGCACCAGAGTaGAACAAGTACAGGAGAGGGAGCAATGAACACAAA +
Preference number: 6 (lower is better)
Translates to: RNTGAEVLCAPE*NKYRRGSNEHK
Trigger: TTTGTGTTCATTGCTCCCTCTCCTGTACTTGTTTCACTCTGGTGCACATAACACTTCAGCACCAGTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS TCA 72 bp CCCAACCAGTACGTACTCTGCAAATATTCCAGGATCTaGAAAAATCCAAAATCTCAAGCACTTCTGGTCCCT +
Preference number: 6 (lower is better)
Translates to: PNQYVLCKYSRI*KNPKSQALLVP
Trigger: AGGGACCAGAAGTGCTTGAGATTTTGGATTTTTTCAGATCCTGGAATATTTGCAGAGTACGTACTGGTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS TCA 72 bp ACTAGGTTAAAATTGGGGATCAAAGGCTGGCTAAGGTaGTGGAAATACCTTGTTCTGGGTAGTGTTTACACA +
Preference number: 6 (lower is better)
Translates to: TRLKLGIKGWLR*WKYLVLGSVYT
Trigger: TGTGTAAACACTACCCAGAACAAGGTATTTCCATCACCTTAGCCAGCCTTTGATCCCCAATTTTAACCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467703.1
CDS TCA 72 bp TCTCTTCCATCACATCTCCACCTTCAATCACTCCAATaGTCACACTCTTCTGAAGAACCTTGTTTGTTACAT +
Preference number: 6 (lower is better)
Translates to: SLPSHLHLQSLQ*SHSSEEPCLLH
Trigger: ATGTAACAAACAAGGTTCTTCAGAAGAGTGTGATCATTGGAGTGATTGAAGGTGGAGATGTGATGGAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482307.1
CDS CAA 72 bp AATTCCATGAGAGCAGCAACTGTTTCCTATTCAATCTaGACTTGCCAATGCCTGGCTCTTAGATGTTCAAAT +
Preference number: 6 (lower is better)
Translates to: NSMRAATVSYSI*TCQCLALRCSN
Trigger: ATTTGAACATCTAAGAGCCAGGCATTGGCAAGTCAAGATTGAATAGGAAACAGTTGCTGCTCTCATGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460163.1
CDS TCA 72 bp TTTCCAACTCCTTCTTTATATTCTGTCAAGACTTCATaGTGTTCTGCTCTTGGTAAGACTCAGCTTCATCCT +
Preference number: 6 (lower is better)
Translates to: FPTPSLYSVKTS*CSALGKTQLHP
Trigger: AGGATGAAGCTGAGTCTTACCAAGAGCAGAACATCATGAAGTCTTGACAGAATATAAAGAAGGAGTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479882.5
CDS GCA 72 bp ATGAGAGCAGCAACTGTTTCCTATTCAATCTTGACTTaGCAATGCCTGGCTCTTAGATGTTCAAATAATACT +
Preference number: 6 (lower is better)
Translates to: MRAATVSYSILT*QCLALRCSNNT
Trigger: AGTATTATTTGAACATCTAAGAGCCAGGCATTGGCAAGTCAAGATTGAATAGGAAACAGTTGCTGCTCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460163.1
CDS TCA 72 bp TATCCAAGAAAAGAAGTGATCGGTCAACAGACTTTCTaGCCCTTTTTATGGAAGTTGCTTCCTTACAAGATA +
Preference number: 6 (lower is better)
Translates to: YPRKEVIGQQTF*PFLWKLLPYKI
Trigger: TATCTTGTAAGGAAGCAACTTCCATAAAAAGGGTCAGAAAGTCTGTTGACCGATCACTTCTTTTCTTGGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281273.8
ENST00000467703.1
ENST00000479882.5
ENST00000485050.5
ENST00000493014.1
CDS CAA 90 bp CTCAACTTTCCTCAATTTAAACCAGCATTCCATGTGACTTTACACTaGGTCTCCAGGTACCATATTATAACAACAATATTTGTAATTGGC +
Preference number: 6 (lower is better)
Translates to: LNFPQFKPAFHVTLH*VSRYHIITTIFVIG
Trigger: GCCAATTACAAATATTGTTGTTATAATATGGTACCTGGAGACCAAGTGTAAAGTCACATGGAATGCTGGTTTAAATTGAGGAAAGTTGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467703.1