RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for QSER1 (Homo sapiens)

Ensembl gene IDs: ENSG00000060749

Ensembl transcript IDs: ENST00000399302.7, ENST00000524678.1, ENST00000527250.5, ENST00000527788.5, ENST00000528034.1, ENST00000528155.1, ENST00000650167.2

Found 661 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACAGTTCCATGATGGAAGCGGCCGGCCTGCAGAAGGCCACTACTTaGCATCTGATTATCTTTGACCACCCCATATCTGCCATTTCATTA +
Preference number: 1 (lower is better)
Translates to: DSSMMEAAGLQKATT*HLIIFDHPISAISL
Trigger: TAATGAAATGGCAGATATGGGGTGGTCAAAGATAATCAGATGTCAAGTAGTGGCCTTCTGCAGGCCGGCCGCTTCCATCATGGAACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR TCA 90 bp AGCGGCCGGCCTGCAGAAGGCCACTACTTGACATCTGATTATCTTTaGCCACCCCATATCTGCCATTTCATTAGTGCTATAAAAAGATGG +
Preference number: 1 (lower is better)
Translates to: SGRPAEGHYLTSDYL*PPHICHFISAIKRW
Trigger: CCATCTTTTTATAGCACTAATGAAATGGCAGATATGGGGTGGTCAAAGATAATCAGATGTCAAGTAGTGGCCTTCTGCAGGCCGGCCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR TCA 90 bp CTAAGGCCTGAGGTTGACATCTTTGCCTATGCTCTATGGATCAAATaGGAGAAGATGATGCATCTACACAATAGGGTCTCTTTGAGGCAG +
Preference number: 1 (lower is better)
Translates to: LRPEVDIFAYALWIK*EKMMHLHNRVSLRQ
Trigger: CTGCCTCAAAGAGACCCTATTGTGTAGATGCATCATCTTCTCTCATTTGATCCATAGAGCATAGGCAAAGATGTCAACCTCAGGCCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR GCA 90 bp CACCTAGGTTTGTGTAAGTACACTAGGATGTTCGCACAACGGAATTaGCTAACAATGCATTTCTCAGAATGTATCCCTGCTGTTAAGCAA +
Preference number: 1 (lower is better)
Translates to: HLGLCKYTRMFAQRN*LTMHFSECIPAVKQ
Trigger: TTGCTTAACAGCAGGGATACATTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTTACACAAACCTAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR TCA 90 bp ACCTCTTTACATAATGTACAGTATTTCTGGTTTTGTGGCCAGATGTaGGTACAAACATATGGTTTCTGCCACTTCTCTGTCATTCTGGTG +
Preference number: 1 (lower is better)
Translates to: TSLHNVQYFWFCGQM*VQTYGFCHFSVILV
Trigger: CACCAGAATGACAGAGAAGTGGCAGAAACCATATGTTTGTACTCACATCTGGCCACAAAACCAGAAATACTGTACATTATGTAAAGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR GCA 90 bp AACGAAAGACATCAATTCTGTCCAGAGTCAATACTATCATATGGCTaGTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTC +
Preference number: 1 (lower is better)
Translates to: NERHQFCPESILSYG*FLLLSTWKIHFMML
Trigger: GAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAGCAGCCATATGATAGTATTGACTCTGGACAGAATTGATGTCTTTCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 90 bp TGGAAACGAAAGACATCAATTCTGTCCAGAGTCAATACTATCATATaGCTGCTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGAT +
Preference number: 1 (lower is better)
Translates to: WKRKTSILSRVNTII*LLPTPLHLENSFYD
Trigger: ATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAGCAGCCATATGATAGTATTGACTCTGGACAGAATTGATGTCTTTCGTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 90 bp GAAGCAACATTTGAGAAAGCTGCTTCAATAACCCTGCTGTTATATTaGTTTTATAGGTATATCTCCAAAGTCATGGGTTGGGATATAGCT +
Preference number: 1 (lower is better)
Translates to: EATFEKAASITLLLY*FYRYISKVMGWDIA
Trigger: AGCTATATCCCAACCCATGACTTTGGAGATATACCTATAAAACCAATATAACAGCAGGGTTATTGAAGCAGCTTTCTCAAATGTTGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 90 bp ATTTACAATGCCACATTAGGAAATGTAGTTCCCTACTCTGCACTTTaGAAACGAAAGACATCAATTCTGTCCAGAGTCAATACTATCATA +
Preference number: 1 (lower is better)
Translates to: IYNATLGNVVPYSAL*KRKTSILSRVNTII
Trigger: TATGATAGTATTGACTCTGGACAGAATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGGAACTACATTTCCTAATGTGGCATTGTAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 90 bp TCCCCATCTTTCCAATGTTTCCTATTTGATAGTGTAATACAGAAATaGGCAGTTTCTAGTGTCAACTTAACTGTGCTAATTCATAAGTCA +
Preference number: 1 (lower is better)
Translates to: SPSFQCFLFDSVIQK*AVSSVNLTVLIHKS
Trigger: TGACTTATGAATTAGCACAGTTAAGTTGACACTAGAAACTGCCCATTTCTGTATTACACTATCAAATAGGAAACATTGGAAAGATGGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTGGAAGCGGCCGGCCTaGAGAAGGCCACTACTTGAC +
Preference number: 2 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSWKRPA*RRPLLD
Trigger: GTCAAGTAGTGGCCTTCTGCAGGCCGGCCGCTTCCA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR GCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTGGAAGCGGCCGGCCTaGAGAAGGCCACTACTTGAC +
Preference number: 2 (lower is better)
Translates to: CHEAYHEENVASEFKHRFWKRPA*RRPLLD
Trigger: GTCAAGTAGTGGCCTTCTGCAGGCCGGCCGCTTCCA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAGTAATGACAGTTCCATaGTGGAAGCGGCCGGCCTGC +
Preference number: 2 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRVMTVP*WKRPAC
Trigger: GCAGGCCGGCCGCTTCCATCATGGAACTGTCATTAC...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGATCCGCGTGTCTTATTTaGGCATTGAGCAGTAACACT +
Preference number: 2 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGSACLI*ALSSNT
Trigger: AGTGTTACTGCTCAATGCCCAAATAAGACACGCGGA...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAACATCTGATTATCTTTaGCCACCCCATATCTGCCAT +
Preference number: 2 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGTSDYL*PPHICH
Trigger: ATGGCAGATATGGGGTGGTCAAAGATAATCAGATGT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAGTGTGTATAAAGGCTaGAAAGGCACCAAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGSVYKG*KGTKRR
Trigger: TCTCCTTTTGGTGCCTTTCCAGCCTTTATACACACT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGTCAATACTATCATATaGCTGCTTCCTACTCCTCTC +
Preference number: 2 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGVNTII*LLPTPL
Trigger: GAGAGGAGTAGGAAGCAGCCATATGATAGTATTGAC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACATACTTTCCTGGGTTGTaGCAACATGTGCTTTACCTC +
Preference number: 2 (lower is better)
Translates to: PRVYTVHLCSYASNATDTYFPGL*QHVLYL
Trigger: GAGGTAAAGCACATGTTGCCACAACCCAGGAAAGTA...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGCCACTACTTGACATCTaGTTATCTTTGACCACCCCA +
Preference number: 2 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKPLLDI*LSLTTP
Trigger: TGGGGTGGTCAAAGATAATCAGATGTCAAGTAGTGG...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACCACTACTTGACATCTaGTTATCTTTGACCACCCCA +
Preference number: 2 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRPLLDI*LSLTTP
Trigger: TGGGGTGGTCAAAGATAATCAGATGTCAAGTAGTGG...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGGAACATTTAACCCTTaGGAGAAACTTCCATTACTG +
Preference number: 2 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGGTFNP*EKLPLL
Trigger: CAGTAATGGAAGTTTCTCTCAAGGGTTAAATGTTCC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCACTTCTCTGTCATTCTaGTGTTTAGCCGGAGTCAGA +
Preference number: 2 (lower is better)
Translates to: CHEAYHEENVASEFKHRFTSLSF*CLAGVR
Trigger: TCTGACTCCGGCTAAACACCAGAATGACAGAGAAGT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CAA 90 bp TCCAGAGTCAATACTATCATATGGCTGCTTCCTACTCCTCTCCACTaGGAAAATTCATTTTATGATGCTCCCACTGTTGATACTCTGCAT +
Preference number: 2 (lower is better)
Translates to: SRVNTIIWLLPTPLH*ENSFYDAPTVDTLH
Trigger: ATGCAGAGTATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAGCAGCCATATGATAGTATTGACTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAACATCTGATTATCTTTaGCCACCCCATATCTGCCAT +
Preference number: 2 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRTSDYL*PPHICH
Trigger: ATGGCAGATATGGGGTGGTCAAAGATAATCAGATGT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACATTTTGTGGCCAGATGTaGGTACAAACATATGGTTTC +
Preference number: 2 (lower is better)
Translates to: PRVYTVHLCSYASNATDTFCGQM*VQTYGF
Trigger: GAAACCATATGTTTGTACTCACATCTGGCCACAAAA...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGTCTTATTTGGGCATTaGGCAGTAACACTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSVLFGH*AVTLLS
Trigger: AGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGAC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGTCTTATTTGGGCATTaGGCAGTAACACTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDVLFGH*AVTLLS
Trigger: AGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGAC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAACAATAGGGTCTCTTTaGGGCAGTATCATAGACTTG +
Preference number: 2 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRTIGSL*GSIIDL
Trigger: CAAGTCTATGATACTGCCTCAAAGAGACCCTATTGT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR GCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACAAACATATGGTTTCTaGCACTTCTCTGTCATTCTG +
Preference number: 2 (lower is better)
Translates to: PRVYTVHLCSYASNATDTQTYGF*HFSVIL
Trigger: CAGAATGACAGAGAAGTGGCAGAAACCATATGTTTG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR GCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAAGCAGTCAGAGAATTaGACCAATTCCACATCCAGT +
Preference number: 2 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKKQSEN*TNSTSS
Trigger: ACTGGATGTGGAATTGGTGCAATTCTCTGACTGCTT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTGTAGTTCCCTACTCTaGACTTTGGAAACGAAAGAC +
Preference number: 2 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSCSSLL*TLETKD
Trigger: GTCTTTCGTTTCCAAAGTGCAGAGTAGGGAACTACA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTTTTGTGGCCAGATGTaGGTACAAACATATGGTTTC +
Preference number: 2 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSFCGQM*VQTYGF
Trigger: GAAACCATATGTTTGTACTCACATCTGGCCACAAAA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAGAAACTTCCATTACTaGGTACCTAGTCTAATGGCA +
Preference number: 2 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRRNFHY*VPSLMA
Trigger: TGCCATTAGACTAGGTACTCAGTAATGGAAGTTTCT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGGAACATTTAACCCTTaGGAGAAACTTCCATTACTG +
Preference number: 2 (lower is better)
Translates to: CHEAYHEENVASEFKHRFGTFNP*EKLPLL
Trigger: CAGTAATGGAAGTTTCTCTCAAGGGTTAAATGTTCC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCTCTGCATCTCTCATATaGGTTAGGCAAAATGAATCT +
Preference number: 2 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVSASLI*VRQNES
Trigger: AGATTCATTTTGCCTAACTCATATGAGAGATGCAGA...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATCAAACATATGGTTTCTaGCACTTCTCTGTCATTCTG +
Preference number: 2 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDQTYGF*HFSVIL
Trigger: CAGAATGACAGAGAAGTGGCAGAAACCATATGTTTG...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGGAAACATCTTTGTTTaGCACGAGGCATATCATGAA +
Preference number: 2 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEGNIFV*HEAYHE
Trigger: TTCATGATATGCCTCGTGGCAAACAAAGATGTTTCC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR GCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATTCGCACAACGGAATTaGCTAACAATGCATTTCTCA +
Preference number: 2 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRFAQRN*LTMHFS
Trigger: TGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAACTTCTCTGTCATTCTaGTGTTTAGCCGGAGTCAGA +
Preference number: 2 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKTSLSF*CLAGVR
Trigger: TCTGACTCCGGCTAAACACCAGAATGACAGAGAAGT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGTGAGTACAAACATATaGTTTCTGCCACTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDVSTNI*FLPLLC
Trigger: ACAGAGAAGTGGCAGAAACCATATGTTTGTACTCAC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCCCTACTCTGCACTTTaGAAACGAAAGACATCAATT +
Preference number: 2 (lower is better)
Translates to: CHEAYHEENVASEFKHRFPYSAL*KRKTSI
Trigger: AATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCCAAAGCGATAACTCATaGACGGCTGTCATAATAACA +
Preference number: 2 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSQSDNS*TAVIIT
Trigger: TGTTATTATGACAGCCGTCCATGAGTTATCGCTTTG...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CAA 90 bp CTCAAAAGCAAGACAATAGCAATATCCGCGTGTCTTATTTGGGCATaGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGCACTAAAT +
Preference number: 2 (lower is better)
Translates to: LKSKTIAISACLIWA*SSNTAFLIGFKALN
Trigger: ATTTAGTGCCTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGCGGATATTGCTATTGTCTTGCTTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATCTGCATCTCTCATATaGGTTAGGCAAAATGAATCT +
Preference number: 2 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRSASLI*VRQNES
Trigger: AGATTCATTTTGCCTAACTCATATGAGAGATGCAGA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTTAAAAATACTTTCCTaGGTTGTGGCAACATGTGCT +
Preference number: 2 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSLKILS*VVATCA
Trigger: AGCACATGTTGCCACAACCCAGGAAAGTATTTTTAA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CAA 90 bp ATATCCGCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTaGATAGGATTTAAGGCACTAAATGGTGGTAAAATAAACAAAAGG +
Preference number: 2 (lower is better)
Translates to: ISACLIWALSSNTAF*IGFKALNGGKINKR
Trigger: CCTTTTGTTTATTTTACCACCATTTAGTGCCTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGCGGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAATTAGGGTAAAAATGTaGTGGGATTTAGGTCCATTT +
Preference number: 2 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEIRVKM*WDLGPF
Trigger: AAATGGACCTAAATCCCACCACATTTTTACCCTAAT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATTTAGGAACGTAGGCTaGAAGAGTAATATAAAGATG +
Preference number: 2 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEFRNVG*KSNIKM
Trigger: CATCTTTATATTACTCTTCCAGCCTACGTTCCTAAA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CAA 90 bp TATTTACAATGCCACATTAGGAAATGTAGTTCCCTACTCTGCACTTaGGAAACGAAAGACATCAATTCTGTCCAGAGTCAATACTATCAT +
Preference number: 2 (lower is better)
Translates to: YLQCHIRKCSSLLCT*ETKDINSVQSQYYH
Trigger: ATGATAGTATTGACTCTGGACAGAATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGGAACTACATTTCCTAATGTGGCATTGTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR TCA 72 bp AAGCGGCCGGCCTGCAGAAGGCCACTACTTGACATCTaGTTATCTTTGACCACCCCATATCTGCCATTTCAT +
Preference number: 3 (lower is better)
Translates to: KRPACRRPLLDI*LSLTTPYLPFH
Trigger: ATGAAATGGCAGATATGGGGTGGTCAAAGATAATCAGATGTCAAGTAGTGGCCTTCTGCAGGCCGGCCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAAAGCAGTCAGAGAATaGCACCAATTCCACATCCAG +
Preference number: 3 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVKAVRE*HQFHIQ
Trigger: CTGGATGTGGAATTGGTGCAATTCTCTGACTGCTTT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGACTTAAGGAAACATCTTaGTTTGCCACGAGGCATATC +
Preference number: 3 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGLKETS*FATRHI
Trigger: GATATGCCTCGTGGCAAACAAAGATGTTTCCTTAAG...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR TCA 72 bp CCTGCAGAAGGCCACTACTTGACATCTGATTATCTTTaGCCACCCCATATCTGCCATTTCATTAGTGCTATA +
Preference number: 3 (lower is better)
Translates to: PAEGHYLTSDYL*PPHICHFISAI
Trigger: TATAGCACTAATGAAATGGCAGATATGGGGTGGTCAAAGATAATCAGATGTCAAGTAGTGGCCTTCTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR TCA 72 bp CACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTaGCACAGAAGCAGTTATCCTGGGATATTTCACTCT +
Preference number: 3 (lower is better)
Translates to: HCSFVQLCVKCD*HRSSYPGIFHS
Trigger: AGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR GCA 72 bp GTGTTACAACTGCCTACAGTATTCAGTACAGTAACATaGTGTACAGGTTTACCATATAGCCTGGGTACGTTG +
Preference number: 3 (lower is better)
Translates to: VLQLPTVFSTVT*CTGLPYSLGTL
Trigger: CAACGTACCCAGGCTATATGGTAAACCTGTACAGCATGTTACTGTACTGAATACTGTAGGCAGTTGTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCAAAGCAGTCAGAGAATaGCACCAATTCCACATCCAG +
Preference number: 3 (lower is better)
Translates to: CHEAYHEENVASEFKHRFKAVRE*HQFHIQ
Trigger: CTGGATGTGGAATTGGTGCAATTCTCTGACTGCTTT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGATCTCAGCTAAACTACTaGAAACGCTACCTATCAAAC +
Preference number: 3 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGSQLNY*KRYLSN
Trigger: GTTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGA...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAATGATGCTCCCACTGTaGATACTCTGCATCTCTCAT +
Preference number: 3 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEMMLPL*ILCISH
Trigger: ATGAGAGATGCAGAGTATCAACAGTGGGAGCATCAT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACATCCCTACTCTGCACTTaGGAAACGAAAGACATCAAT +
Preference number: 3 (lower is better)
Translates to: PRVYTVHLCSYASNATDTSLLCT*ETKDIN
Trigger: ATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGGA...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCACAATAGGGTCTCTTaGAGGCAGTATCATAGACTT +
Preference number: 3 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVHNRVS*RQYHRL
Trigger: AAGTCTATGATACTGCCTCAAAGAGACCCTATTGTG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCCTGAGGTTGACATCTTaGCCTATGCTCTATGGATCA +
Preference number: 3 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSLRLTS*PMLYGS
Trigger: TGATCCATAGAGCATAGGCAAAGATGTCAACCTCAG...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACTCCAAAGTCATGGGTaGGGATATAGCTGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: PRVYTVHLCSYASNATDTLQSHG*GYSCFK
Trigger: TTTAAAGCAGCTATATCCCAACCCATGACTTTGGAG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR GCA 72 bp TTGTGTAAGTACACTAGGATGTTCGCACAACGGAATTaGCTAACAATGCATTTCTCAGAATGTATCCCTGCT +
Preference number: 3 (lower is better)
Translates to: LCKYTRMFAQRN*LTMHFSECIPA
Trigger: AGCAGGGATACATTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTTACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 72 bp GCCACATTAGGAAATGTAGTTCCCTACTCTGCACTTTaGAAACGAAAGACATCAATTCTGTCCAGAGTCAAT +
Preference number: 3 (lower is better)
Translates to: ATLGNVVPYSAL*KRKTSILSRVN
Trigger: ATTGACTCTGGACAGAATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGGAACTACATTTCCTAATGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 72 bp ATGCGTCAAATGCGACTGACACAGAAGCAGTTATCCTaGGATATTTCACTCTATATGAAAAGCATCTTGGAG +
Preference number: 3 (lower is better)
Translates to: MRQMRLTQKQLS*DISLYMKSILE
Trigger: CTCCAAGATGCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCATTTGACGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCACAGTATTTCTGGTTTaGTGGCCAGATGTGAGTACA +
Preference number: 3 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSTVFLV*WPDVST
Trigger: TGTACTCACATCTGGCCACAAAACCAGAAATACTGT...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACATCTCAGCTAAACTACTaGAAACGCTACCTATCAAAC +
Preference number: 3 (lower is better)
Translates to: PRVYTVHLCSYASNATDTSQLNY*KRYLSN
Trigger: GTTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGA...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTGTCTTATTTGGGCATaGAGCAGTAACACTGCTTTC +
Preference number: 3 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDCLIWA*SSNTAF
Trigger: GAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTCCCTACTCTGCACTTaGGAAACGAAAGACATCAAT +
Preference number: 3 (lower is better)
Translates to: CHEAYHEENVASEFKHRFSLLCT*ETKDIN
Trigger: ATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGGA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTTAAGGAAACATCTTaGTTTGCCACGAGGCATATC +
Preference number: 3 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRLKETS*FATRHI
Trigger: GATATGCCTCGTGGCAAACAAAGATGTTTCCTTAAG...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAGGCAGTATCATAGACTaGGCCTCCCATATTATGAAA +
Preference number: 3 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRGSIID*ASHIMK
Trigger: TTTCATAATATGGGAGGCCAAGTCTATGATACTGCC...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGGCAGTATCATAGACTaGGCCTCCCATATTATGAAA +
Preference number: 3 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEGSIID*ASHIMK
Trigger: TTTCATAATATGGGAGGCCAAGTCTATGATACTGCC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAGATACACAAATACCATaGTGTTACAACTGCCTACAG +
Preference number: 3 (lower is better)
Translates to: PRVYTVHLCSYASNATDTDTQIP*CYNCLQ
Trigger: CTGTAGGCAGTTGTAACACAATGGTATTTGTGTATC...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAAATACTTTCCTGGGTaGTGGCAACATGTGCTTTAC +
Preference number: 3 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRKYFPG*WQHVLY
Trigger: GTAAAGCACATGTTGCCACAACCCAGGAAAGTATTT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACCTACTCCTCTCCACTaGGAAAATTCATTTTATGAT +
Preference number: 3 (lower is better)
Translates to: PRVYTVHLCSYASNATDTPTPLH*ENSFYD
Trigger: ATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR TCA 72 bp GCCGCATTACAACTTTTCAAAGACAGACCGCGTATTTaGCAGTGGTCCCGTAAGATTATAATACCATATTCT +
Preference number: 3 (lower is better)
Translates to: AALQLFKDRPRI*QWSRKIIIPYS
Trigger: AGAATATGGTATTATAATCTTACGGGACCACTGTCAAATACGCGGTCTGTCTTTGAAAAGTTGTAATGCGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 72 bp AAAAGCAAGACAATAGCAATATCCGCGTGTCTTATTTaGGCATTGAGCAGTAACACTGCTTTCTTGATAGGA +
Preference number: 3 (lower is better)
Translates to: KSKTIAISACLI*ALSSNTAFLIG
Trigger: TCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGCGGATATTGCTATTGTCTTGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 72 bp AAGACATCAATTCTGTCCAGAGTCAATACTATCATATaGCTGCTTCCTACTCCTCTCCACTTGGAAAATTCA +
Preference number: 3 (lower is better)
Translates to: KTSILSRVNTII*LLPTPLHLENS
Trigger: TGAATTTTCCAAGTGGAGAGGAGTAGGAAGCAGCCATATGATAGTATTGACTCTGGACAGAATTGATGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAAACACAAGGTCATGTaGAACCTAATACATTCACTG +
Preference number: 3 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEKHKVM*NLIHSL
Trigger: CAGTGAATGTATTAGGTTCAACATGACCTTGTGTTT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAGTAACACTGCTTTCTaGATAGGATTTAAGGCACTA +
Preference number: 3 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDSNTAF*IGFKAL
Trigger: TAGTGCCTTAAATCCTATCAAGAAAGCAGTGTTACT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCCTACTCCTCTCCACTaGGAAAATTCATTTTATGAT +
Preference number: 3 (lower is better)
Translates to: CHEAYHEENVASEFKHRFPTPLH*ENSFYD
Trigger: ATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR TCA 72 bp ATGGAACATTTAACCCTTGAGAGAAACTTCCATTACTaGGTACCTAGTCTAATGGCAAGTACAGTATTAAGG +
Preference number: 3 (lower is better)
Translates to: MEHLTLERNFHY*VPSLMASTVLR
Trigger: CCTTAATACTGTACTTGCCATTAGACTAGGTACTCAGTAATGGAAGTTTCTCTCAAGGGTTAAATGTTCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 72 bp TTTGAGAAAGCTGCTTCAATAACCCTGCTGTTATATTaGTTTTATAGGTATATCTCCAAAGTCATGGGTTGG +
Preference number: 3 (lower is better)
Translates to: FEKAASITLLLY*FYRYISKVMGW
Trigger: CCAACCCATGACTTTGGAGATATACCTATAAAACCAATATAACAGCAGGGTTATTGAAGCAGCTTTCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CCA 72 bp ATGACTGTATTTAACTTCATACAAAGCGATAACTCATaGACGGCTGTCATAATAACATTTCCACTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: MTVFNFIQSDNS*TAVIITFPLFS
Trigger: AGAGAAAAGTGGAAATGTTATTATGACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGGGCGGCGGCGGCCGCTaGGCCCCATGTTGGTGGATT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRGGGGR*APCWWI
Trigger: AATCCACCAACATGGGGCGCAGCGGCCGCCGCCGCC...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGCCCCAGATTGGGCCATaGCCAACAGTGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRPQIGP*PTVQVH
Trigger: GTGCACTTGCACTGTTGGCCATGGCCCAATCTGGGG...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAGCGGCGGCGGCTCGGTaGAGCCCGAGGTCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRAAAAR*SPRSRS
Trigger: ACTACGCGACCTCGGGCTTCACCGAGCCGCCGCCGC...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGAACCATCTGGGTCCCTaGCCGTCTAGTCCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRNHLGP*PSSPVR
Trigger: CCTAACAGGACTAGACGGCCAGGGACCCAGATGGTT...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGCGGCGAGGCCCCAGCTaGGCGTCAGGGAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKRRGPS*ASGKRR
Trigger: CCTCCGCTTCCCTGACGCCCAGCTGGGGCCTCGCCG...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS-3UTR CCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGCGCGCTGGCGAGTCTaGGCCGCAAAGACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKARWRV*AAKTRA
Trigger: GGCCCGGGTCTTTGCGGCCCAGACTCGCCAGCGCGC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAGCTGCCCCCTCACATaGCCCCGGCGAGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRSCPLT*PRRAGG
Trigger: CCCGCCTGCTCGCCGGGGCCATGTGAGGGGGCAGCT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTGCTCCTGGACTTCATaGCTTGGTCCAACCACTGCT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRCSWTS*LGPTTA
Trigger: AGCAGTGGTTGGACCAAGTCATGAAGTCCAGGAGCA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTGTGGGTGTTGTAGATaGAGGCTTGGGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRCGCCR*RLGKWW
Trigger: CCACCACTTCCCAAGCCTTCATCTACAACACCCACA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACATGCAGCTGCCACTGCTaGAGCTGCTGCTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTCSCHC*SCCWRR
Trigger: CCGCCGCCAGCAGCAGCTGCAGCAGTGGCAGCTGCA...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTTAGGAAGAGATGCCTaGTGGCCATGCCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRLGRDA*WPCPKA
Trigger: TGCTTTAGGGCATGGCCATCAGGCATCTCTTCCTAA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGATCATGGCAGCTTTCTaGGGAAGGAGGAGTATACGG +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRIMAAF*GRRSIR
Trigger: CCGTATACTCCTCCTTCCTCAGAAAGCTGCCATGAT...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTGTTCAAAAAGCGAGTaGCAAAGGGAGCGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRCSKSE*QREREV
Trigger: AACCTCCCGCTCCCTTTGTCACTCGCTTTTTGAACA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATGCAGCTGCCACTGCTaGAGCTGCTGCTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSECSCHC*SCCWRR
Trigger: CCGCCGCCAGCAGCAGCTGCAGCAGTGGCAGCTGCA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGGCAGGCAAAAACTTCTaGGACTGGGGAGATGATGAC +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRAGKNF*DWGDDD
Trigger: GTCATCATCTCCCCAGTCCCAGAAGTTTTTGCCTGC...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGGGAGAAGGGCGCGCTaGCGAGTCTGGGCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDGRRAR*RVWAAK
Trigger: CTTTGCGGCCCAGACTCGCCAGCGCGCCCTTCTCCC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS-3UTR GCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGGCTGCTGCCGCTACTaGAGCTGCCACTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKGCCRY*SCHCCS
Trigger: GCTGCAGCAGTGGCAGCTGCAGTAGCGGCAGCAGCC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAAGTTCCTGTCCATCGTaGGGGTGGCGTAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTSSCPS*GWRREG
Trigger: GCCCTCCCTACGCCACCCCCACGATGGACAGGAACT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGGTACCTGAAGGCCGCTaGTGGTGTTTAATAACACTA +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRVPEGR*WCLITL
Trigger: TAGTGTTATTAAACACCATCAGCGGCCTTCAGGTAC...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTTTAGGGGTCTTGGTTaGTGTCAGTGGTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRFRGLG*CQWLFC
Trigger: ACAGAACAACCACTGACATCAACCAAGACCCCTAAA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGAAAGATGCCTTTACTTaGCCTAAACCTGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRKDAFT*PKPACS
Trigger: ACTGCAGGCAGGTTTAGGTCAAGTAAAGGCATCTTT...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTGGACCTTGGACTCATaGACCTTAAGTATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRWTLDS*TLSMRG
Trigger: TCCTCTCATACTTAAGGTGCATGAGTCCAAGGTCCA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGAATATCTGTTCCCCTTaGATTCTGGCGTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRNICSP*ILAFAL
Trigger: CAAGGCAAACGCCAGAATCCAAGGGGAACAGATATT...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTACTTTCCTGGGTTGTaGCAACATGTGCTTTACCTC +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRYFPGL*QHVLYL
Trigger: GAGGTAAAGCACATGTTGCCACAACCCAGGAAAGTA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGACAGCTCAGTTGCTGCTaGGGAATGCATGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGQLSCC*GMHACL
Trigger: CAGACAGGCATGCATTCCTCAGCAGCAACTGAGCTG...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGACTGAGCAAGTTCCACTaGGACCTGGGAGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGLSKFH*DLGGLL
Trigger: CAGAAGACCTCCCAGGTCTCAGTGGAACTTGCTCAG...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGACATCTGATTATCTTTaGCCACCCCATATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRTSDYL*PPHICH
Trigger: ATGGCAGATATGGGGTGGTCAAAGATAATCAGATGT...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAGGCTGCTGCCGCTACTaGAGCTGCCACTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKGCCRY*SCHCCS
Trigger: GCTGCAGCAGTGGCAGCTGCAGTAGCGGCAGCAGCC...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTGGAAGCGGCCGGCCTaGAGAAGGCCACTACTTGAC +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDWKRPA*RRPLLD
Trigger: GTCAAGTAGTGGCCTTCTGCAGGCCGGCCGCTTCCA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTGTAGTTCCCTACTCTaGACTTTGGAAACGAAAGAC +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRCSSLL*TLETKD
Trigger: GTCTTTCGTTTCCAAAGTGCAGAGTAGGGAACTACA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTCCCCAGATTGGGCCATaGCCAACAGTGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAPQIGP*PTVQVH
Trigger: GTGCACTTGCACTGTTGGCCATGGCCCAATCTGGGG...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAACTGCATCCCCAGATTaGGCCATGGCCAACAGTGCA +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGTASPD*AMANSA
Trigger: TGCACTGTTGGCCATGGCCCAATCTGGGGATGCAGT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGAGTGTGTATAAAGGCTaGAAAGGCACCAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRSVYKG*KGTKRR
Trigger: TCTCCTTTTGGTGCCTTTCCAGCCTTTATACACACT...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGGTCAATACTATCATATaGCTGCTTCCTACTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRVNTII*LLPTPL
Trigger: GAGAGGAGTAGGAAGCAGCCATATGATAGTATTGAC...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGCCTGAAGCAGCAGCCTaGGCAGTTCGGGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKPEAAA*AVRDSA
Trigger: TGCTGAATCCCGAACTGCTCAGGCTGCTGCTTCAGG...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACAGCTCAGTTGCTGCTaGGGAATGCATGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTQLSCC*GMHACL
Trigger: CAGACAGGCATGCATTCCTCAGCAGCAACTGAGCTG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGATGGGGTGCAGACTCTTaGGCTGAGCGGTATGTTGAA +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGWGADS*AERYVE
Trigger: TTCAACATACCGCTCAGCTCAAGAGTCTGCACCCCA...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTCCTCCGTTGCTCACCTaGGTGGAATCTCCAATTGGG +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAPPLLT*VESPIG
Trigger: CCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGG...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACCTAGCTGGGTTCATTaGCACACCACTGTCGTCACC +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTPSWVH*HTTVVT
Trigger: GGTGACGACAGTGGTGTGTCAATGAACCCAGCTAGG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGTAATGACAGTTCCATaGTGGAAGCGGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDVMTVP*WKRPAC
Trigger: GCAGGCCGGCCGCTTCCATCATGGAACTGTCATTAC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGTAATGACAGTTCCATaGTGGAAGCGGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEVMTVP*WKRPAC
Trigger: GCAGGCCGGCCGCTTCCATCATGGAACTGTCATTAC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGGGAACATTTAACCCTTaGGAGAAACTTCCATTACTG +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRGTFNP*EKLPLL
Trigger: CAGTAATGGAAGTTTCTCTCAAGGGTTAAATGTTCC...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACTGCTGAGGAATGCATaGCTGTCTGCCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTLLRNA*LSARME
Trigger: CTCCATCCTGGCAGACAGGCATGCATTCCTCAGCAG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGGCCATGGCCAACAGTaGAAGTGCACTCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFGHGQQ*KCTPSW
Trigger: CCAGCTAGGAGTGCACTTGCACTGTTGGCCATGGCC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGGGTTGTGGCAACATGTaGTTTACCTCTTTAACTCTA +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRGCGNM*FTSLTL
Trigger: TAGAGTTAAAGAGGTAAAGCACATGTTGCCACAACC...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTTCAGCATAAGACTTTaGGTCAGGGGAAGTTATGTT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRFSIRL*VRGSYV
Trigger: AACATAACTTCCCCTGACCCAAAGTCTTATGCTGAA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTACTGCATCCCCAGATTaGGCCATGGCCAACAGTGCA +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEATASPD*AMANSA
Trigger: TGCACTGTTGGCCATGGCCCAATCTGGGGATGCAGT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGTTCCCCTTGGATTCTaGCGTTTGCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVVPLGF*RLPWAG
Trigger: ACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAAC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGGTGAGTACAAACATATaGTTTCTGCCACTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRVSTNI*FLPLLC
Trigger: ACAGAGAAGTGGCAGAAACCATATGTTTGTACTCAC...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTCCAAAGTCATGGGTTaGGATATAGCTGCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRSKVMG*DIAALK
Trigger: CTTTAAAGCAGCTATATCCCAACCCATGACTTTGGA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGATTCTCATTTGTAACTaGAGACAATACCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRILICN*RQYLLL
Trigger: CAGCAAGAGGTATTGTCTTCAGTTACAAATGAGAAT...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAGAGTCTGGCAAATTCTaGGCCCGAGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTESGKF*AREAEE
Trigger: TTCTTCTGCCTCTCGGGCTCAGAATTTGCCAGACTC...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACCTAGCTGGGTTCATTaGCACACCACTGTCGTCACC +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRPSWVH*HTTVVT
Trigger: GGTGACGACAGTGGTGTGTCAATGAACCCAGCTAGG...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGAATGCATGCCTGTCTaGCAGGATGGAGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAECMPV*QDGALN
Trigger: ATTCAGGGCTCCATCCTGGCAGACAGGCATGCATTC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCCTGCTGAGGAATGCATaGCTGTCTGCCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSLLRNA*LSARME
Trigger: CTCCATCCTGGCAGACAGGCATGCATTCCTCAGCAG...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGGCCAACAGTGCAAGTaGACTCCTAGCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVGQQCK*TPSWVH
Trigger: ATGAACCCAGCTAGGAGTGCACTTGCACTGTTGGCC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGCAAGAGTGGAAAACTaGTGCTTGGGCCCGGATTTC +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVARVEN*CLGPDF
Trigger: GAAATCCGGGCCCAAGCAGCAGTTTTCCACTCTTGC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGTTCCCCTTGGATTCTaGCGTTTGCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDVPLGF*RLPWAG
Trigger: ACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAAC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAACCATCTGGGTCCCTaGCCGTCTAGTCCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRNHLGP*PSSPVR
Trigger: CCTAACAGGACTAGACGGCCAGGGACCCAGATGGTT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGATCACGCTCTCTGTATTaGCCTTCTCCTCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGSRSLY*PSPPLS
Trigger: AGAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGA...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGCTCAGCCTTTACTTTTaGCTGTTTAACTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRLSLYF*LFNFGF
Trigger: AAACCCAAAGTTAAACAGCCAAAAGTAAAGGCTGAG...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGCAGTGCCAAAGGAAATaGGTTATTTTCTATGGGAAA +
Preference number: 4 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRQCQRK*VIFYGK
Trigger: TTTCCCATAGAAAATAACCCATTTCCTTTGGCACTG...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGAAAGACCAGTAGGCTaGGGTGTGGGAGCATATCCA +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEERPVG*GVGAYP
Trigger: TGGATATGCTCCCACACCTCAGCCTACTGGTCTTTC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACCTGAAGCAGCAGCCTaGGCAGTTCGGGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKPEAAA*AVRDSA
Trigger: TGCTGAATCCCGAACTGCTCAGGCTGCTGCTTCAGG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTGGGGTGCAGACTCTTaGGCTGAGCGGTATGTTGAA +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFWGADS*AERYVE
Trigger: TTCAACATACCGCTCAGCTCAAGAGTCTGCACCCCA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGAGTCTGGCAAATTCTaGGCCCGAGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKESGKF*AREAEE
Trigger: TTCTTCTGCCTCTCGGGCTCAGAATTTGCCAGACTC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAAAGGGCAGGTACTGGTaGAAGGTTCACAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTKGRYW*KVHSNL
Trigger: CAGGTTACTGTGAACCTTTCACCAGTACCTGCCCTT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATGTGGGTGTTGTAGATaGAGGCTTGGGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRCGCCR*RLGKWW
Trigger: CCACCACTTCCCAAGCCTTCATCTACAACACCCACA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTGCACCCACAGTGGTTaGGGAAGTAGTAGCAGTACC +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKCTHSG*GSSSST
Trigger: GGTACTGCTACTACTTCCTCAACCACTGTGGGTGCA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGCAACTGCAAGCAGTTTaGGGGCAACTGCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKQLQAV*GQLQCQ
Trigger: TTGGCACTGCAGTTGCCCTCAAACTGCTTGCAGTTG...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCCAACTGCAAGCAGTTTaGGGGCAACTGCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSQLQAV*GQLQCQ
Trigger: TTGGCACTGCAGTTGCCCTCAAACTGCTTGCAGTTG...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGAATGCATGCCTGTCTaGCAGGATGGAGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFECMPV*QDGALN
Trigger: ATTCAGGGCTCCATCCTGGCAGACAGGCATGCATTC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGTTGCTGCTGAGGAATaGATGCCTGTCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEVAAEE*MPVCQD
Trigger: ATCCTGGCAGACAGGCATGCATTCCTCAGCAGCAAC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGCCCAGGCGCTCAAATaGCAAAGCAGTTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSAQALK*QSSWNS
Trigger: ACTGTTCCAACTGCTTTGGCATTTGAGCGCCTGGGC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGGCCAACAGTGCAAGTaGACTCCTAGCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSGQQCK*TPSWVH
Trigger: ATGAACCCAGCTAGGAGTGCACTTGCACTGTTGGCC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGCAAGAGTGGAAAACTaGTGCTTGGGCCCGGATTTC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEARVEN*CLGPDF
Trigger: GAAATCCGGGCCCAAGCAGCAGTTTTCCACTCTTGC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGAGTGGAGAGGTTCTTaGTTAACTGCACCCACAGTG +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAEWRGS*LTAPTV
Trigger: CACTGTGGGTGCAGTTAAGCAAGAACCTCTCCACTC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCAGTTTGAGGGCAACTaGAGTGCCAAAGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVQFEGN*SAKGNG
Trigger: CCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGCAGGCAAAAACTTCTaGGACTGGGGAGATGATGAC +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAAGKNF*DWGDDD
Trigger: GTCATCATCTCCCCAGTCCCAGAAGTTTTTGCCTGC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTTTCTGGCGTTTGCCTTaGGCAGGTCTTTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAFWRLP*AGLFSC
Trigger: ACAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAA...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGACTGAAGCACCAAAGGTaGAGTGGTAGCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGLKHQR*SGSKVS
Trigger: AGAAACTTTGCTACCACTTCACCTTTGGTGCTTCAG...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACCAGTCAGTTGTGCCTaGATTGACTGGGTACCTGAA +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRPVSCA*IDWVPE
Trigger: TTCAGGTACCCAGTCAATTCAGGCACAACTGACTGG...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACCTCCGTTGCTCACCTaGGTGGAATCTCCAATTGGG +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKPPLLT*VESPIG
Trigger: CCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACTGAGCAAGTTCCACTaGGACCTGGGAGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKLSKFH*DLGGLL
Trigger: CAGAAGACCTCCCAGGTCTCAGTGGAACTTGCTCAG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGACTGAGAGTGACCAGATaGGTAACTTTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGLRVTR*VTLRLT
Trigger: AGTCAGTCTCAAAGTTACTCATCTGGTCACTCTCAG...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTTAGGAAGAGATGCCTaGTGGCCATGCCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSLGRDA*WPCPKA
Trigger: TGCTTTAGGGCATGGCCATCAGGCATCTCTTCCTAA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAATCAAGAGTCATTTTTaGCTGAAGGGCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGIKSHF*LKGRYW
Trigger: CCAGTACCTGCCCTTCAGTCAAAAATGACTCTTGAT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGATCATGGCAGCTTTCTaGGGAAGGAGGAGTATACGG +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKIMAAF*GRRSIR
Trigger: CCGTATACTCCTCCTTCCTCAGAAAGCTGCCATGAT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATGTTCAAAAAGCGAGTaGCAAAGGGAGCGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRCSKSE*QREREV
Trigger: AACCTCCCGCTCCCTTTGTCACTCGCTTTTTGAACA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGTTGTAATCCTCCGTTaGTCACCTGAGTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVVVILR*SPEWNL
Trigger: GAGATTCCACTCAGGTGAGCAACGGAGGATTACAAC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGTTGTAATCCTCCGTTaGTCACCTGAGTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAVVILR*SPEWNL
Trigger: GAGATTCCACTCAGGTGAGCAACGGAGGATTACAAC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAGAGATGCTTGTGGCTaGAACACCTGTAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVRDACG*NTCNSC
Trigger: GCAAGAGTTACAGGTGTTGCAGCCACAAGCATCTCT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGGCCATGGCCAACAGTaGAAGTGCACTCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKGHGQQ*KCTPSW
Trigger: CCAGCTAGGAGTGCACTTGCACTGTTGGCCATGGCC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCAGAGTGGAAAACTGCTaGTTGGGCCCGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSRVENC*LGPDFR
Trigger: TCTGAAATCCGGGCCCAAGCAGCAGTTTTCCACTCT...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAGAGTGGAGAGGTTCTTaGTTAACTGCACCCACAGTG +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMREWRGS*LTAPTV
Trigger: CACTGTGGGTGCAGTTAAGCAAGAACCTCTCCACTC...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACAGTTTGAGGGCAACTaGAGTGCCAAAGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEQFEGN*SAKGNG
Trigger: CCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAAGTGTTCCAGTGCTTaGCAAAGGTCCAGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGKCSSA*QRSSSK
Trigger: TTTGCTACTGGACCTTTGCCAAGCACTGGAACACTT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAGCAGAGAGAGATGGTaGAAGTGTTCCAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRSRERW*KCSSAW
Trigger: CCAAGCACTGGAACACTTCCACCATCTCTCTCTGCT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAGCAGAGAGAGATGGTaGAAGTGTTCCAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKSRERW*KCSSAW
Trigger: CCAAGCACTGGAACACTTCCACCATCTCTCTCTGCT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAAATGCCAAAGCAGTTaGAACAGTTCCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGKCQSS*NSSLGS
Trigger: ACTTCCCAGGGAACTGTTCCAACTGCTTTGGCATTT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACGTTGCTCACCTGAGTaGAATCTCCAATTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSERCSPE*NLQLGY
Trigger: GTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCGTTGCTCACCTGAGTaGAATCTCCAATTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFRCSPE*NLQLGY
Trigger: GTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACCCCAGATTGGGCCATaGCCAACAGTGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKPQIGP*PTVQVH
Trigger: GTGCACTTGCACTGTTGGCCATGGCCCAATCTGGGG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTTCGTACAGCAAGAGTaGAAAACTGCTGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKFVQQE*KTAAWA
Trigger: GGCCCAAGCAGCAGTTTTCCACTCTTGCTGTACGAA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTTCGTACAGCAAGAGTaGAAAACTGCTGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDFVQQE*KTAAWA
Trigger: GGCCCAAGCAGCAGTTTTCCACTCTTGCTGTACGAA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAGGCTTGGGAAGTGGTaGGGGACAAAATGTACGAAC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSERLGKW*GTKCTN
Trigger: GTTCGTACATTTTGTCCCCCACCACTTCCCAAGCCT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAGGCTTGGGAAGTGGTaGGGGACAAAATGTACGAAC +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKRLGKW*GTKCTN
Trigger: GTTCGTACATTTTGTCCCCCACCACTTCCCAAGCCT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATCACGCTCTCTGTATTaGCCTTCTCCTCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSESRSLY*PSPPLS
Trigger: AGAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACCGTTTCTTTGGTGGTaGCTCAGCCTTTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTPFLWW*LSLYFW
Trigger: CCAAAAGTAAAGGCTGAGCCACCACCAAAGAAACGG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAGCAAAACTCTGTCTCTaGAGGAGATCTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTAKLCL*RRSVSE
Trigger: CTCTGAAACAGATCTCCTTCAGAGACAGAGTTTTGC...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCAAAGTTTCTATTGCTaGAGGTGGTGGGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVQSFYC*RWWDAD
Trigger: ATCAGCATCCCACCACCTTCAGCAATAGAAACTTTG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTCAAAGTTTCTATTGCTaGAGGTGGTGGGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAQSFYC*RWWDAD
Trigger: ATCAGCATCCCACCACCTTCAGCAATAGAAACTTTG...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTCGGTATGTTGAAGACTaGGGTGGTATGCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEARYVED*GGMLLL
Trigger: AAGTAACAGCATACCACCTCAGTCTTCAACATACCG...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGGATCCCCCAAGTGCTaGAGGCAACAAACTAAATTG +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKGSPKC*RQQTKL
Trigger: CAATTTAGTTTGTTGCCTTCAGCACTTGGGGGATCC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGGATCCCCCAAGTGCTaGAGGCAACAAACTAAATTG +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSGSPKC*RQQTKL
Trigger: CAATTTAGTTTGTTGCCTTCAGCACTTGGGGGATCC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAACTAGTAAAGAGAGTTaGACTGTAGGCTTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGTSKES*TVGLRS
Trigger: ACTCCTCAAGCCTACAGTTCAACTCTCTTTACTAGT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGGAGGAATTATACTTTaGGGTTTAGGGGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGGGIIL*GLGVLV
Trigger: AACCAAGACCCCTAAACCTCAAAGTATAATTCCTCC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACTGAGAGTGACCAGATaGGTAACTTTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTLRVTR*VTLRLT
Trigger: AGTCAGTCTCAAAGTTACTCATCTGGTCACTCTCAG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAGATGGATACACATCTaGGTCAAGCTTTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGRWIHI*VKLSFS
Trigger: GCTGAAAGAAAGCTTGACTCAGATGTGTATCCATCT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCTGAAGTCACATGCCTaGCATCTAATGACTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVLKSHA*HLMTAE
Trigger: TTCAGCAGTCATTAGATGTCAGGCATGTGACTTCAG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATGCTCCTGGACTTCATaGCTTGGTCCAACCACTGCT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKCSWTS*LGPTTA
Trigger: AGCAGTGGTTGGACCAAGTCATGAAGTCCAGGAGCA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACCTAGCTGGGTTCATTaGCACACCACTGTCGTCACC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKPSWVH*HTTVVT
Trigger: GGTGACGACAGTGGTGTGTCAATGAACCCAGCTAGG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAACAATAGGGTCTCTTTaGGGCAGTATCATAGACTTG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGTIGSL*GSIIDL
Trigger: CAAGTCTATGATACTGCCTCAAAGAGACCCTATTGT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTGCGTCAAATGCGACTaGCACAGAAGCAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFCVKCD*HRSSYP
Trigger: AGGATAACTGCTTCTGTGTCAGTCGCATTTGACGCA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAGCCCAGGCGCTCAAATaGCAAAGCAGTTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKAQALK*QSSWNS
Trigger: ACTGTTCCAACTGCTTTGGCATTTGAGCGCCTGGGC...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGCAATTTCTCAACCTTaGTGGACCTATAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGAISQP*WTYKPV
Trigger: CACAGGTTTATAGGTCCAGCAAGGTTGAGAAATTGC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAGAGATGCTTGTGGCTaGAACACCTGTAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDRDACG*NTCNSC
Trigger: GCAAGAGTTACAGGTGTTGCAGCCACAAGCATCTCT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAATCTTGACACTGACTaGATCCCCAGATTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDNLDTD*IPRLGH
Trigger: ATGGCCCAATCTGGGGATGCAGTCAGTGTCAAGATT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAATCTTGACACTGACTaGATCCCCAGATTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSENLDTD*IPRLGH
Trigger: ATGGCCCAATCTGGGGATGCAGTCAGTGTCAAGATT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTTGGATTCTGGCGTTTaGCTTGGGCAGGTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKLDSGV*LGQVFS
Trigger: TGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATTGGATTCTGGCGTTTaGCTTGGGCAGGTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRLDSGV*LGQVFS
Trigger: TGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCCTCTTCTCTAAGGCTTaGATTGTGTCAGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSLFSKA*IVSGSK
Trigger: CTTGGACCCTGACACAATGCAAGCCTTAGAGAAGAG...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACTCTTCTCTAAGGCTTaGATTGTGTCAGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSELFSKA*IVSGSK
Trigger: CTTGGACCCTGACACAATGCAAGCCTTAGAGAAGAG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAAGCAGTCAGAGAATTaGACCAATTCCACATCCAGT +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGKQSEN*TNSTSS
Trigger: ACTGGATGTGGAATTGGTGCAATTCTCTGACTGCTT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGATGTAGTTCCCTACTCTaGACTTTGGAAACGAAAGAC +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGCSSLL*TLETKD
Trigger: GTCTTTCGTTTCCAAAGTGCAGAGTAGGGAACTACA...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAAAGTGTTCCAGTGCTTaGCAAAGGTCCAGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTKCSSA*QRSSSK
Trigger: TTTGCTACTGGACCTTTGCCAAGCACTGGAACACTT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAATAAGCAGAGAGAGATaGTGGAAGTGTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTISRER*WKCSSA
Trigger: AGCACTGGAACACTTCCACCATCTCTCTCTGCTTAT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGTTGGAACAGTTCCCTaGGAAGTCTTGATTTGTAGC +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAVGTVP*EVLICS
Trigger: GCTACAAATCAAGACTTCCCAGGGAACTGTTCCAAC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCAAGAAGCACTGCCTCTaGGAAACACATCGATCCAAG +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFKKHCL*ETHRSK
Trigger: CTTGGATCGATGTGTTTCCCAGAGGCAGTGCTTCTT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAAGAAGCACTGCCTCTaGGAAACACATCGATCCAAG +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEKKHCL*ETHRSK
Trigger: CTTGGATCGATGTGTTTCCCAGAGGCAGTGCTTCTT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAACTGCATCCCCAGATTaGGCCATGGCCAACAGTGCA +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKTASPD*AMANSA
Trigger: TGCACTGTTGGCCATGGCCCAATCTGGGGATGCAGT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGTTCCCCTTGGATTCTaGCGTTTGCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKVPLGF*RLPWAG
Trigger: ACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAAC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAACCATCTGGGTCCCTaGCCGTCTAGTCCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKNHLGP*PSSPVR
Trigger: CCTAACAGGACTAGACGGCCAGGGACCCAGATGGTT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTACTTCTCTGTCATTCTaGTGTTTAGCCGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEATSLSF*CLAGVR
Trigger: TCTGACTCCGGCTAAACACCAGAATGACAGAGAAGT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCTCCGCGTGTCTTATTTaGGCATTGAGCAGTAACACT +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVSACLI*ALSSNT
Trigger: AGTGTTACTGCTCAATGCCCAAATAAGACACGCGGA...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTTCCGCGTGTCTTATTTaGGCATTGAGCAGTAACACT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEASACLI*ALSSNT
Trigger: AGTGTTACTGCTCAATGCCCAAATAAGACACGCGGA...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGCAAAACTCTGTCTCTaGAGGAGATCTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDAKLCL*RRSVSE
Trigger: CTCTGAAACAGATCTCCTTCAGAGACAGAGTTTTGC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATCTGAAGCACCAAAGGTaGAGTGGTAGCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDLKHQR*SGSKVS
Trigger: AGAAACTTTGCTACCACTTCACCTTTGGTGCTTCAG...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATTCCCTGGGAAGTCTTaGTTTGTAGCAAAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEFPGKS*FVAKGH
Trigger: ATGACCCTTTGCTACAAATCAAGACTTCCCAGGGAA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTTCCCTGGGAAGTCTTaGTTTGTAGCAAAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKFPGKS*FVAKGH
Trigger: ATGACCCTTTGCTACAAATCAAGACTTCCCAGGGAA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCCGGTATGTTGAAGACTaGGGTGGTATGCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSRYVED*GGMLLL
Trigger: AAGTAACAGCATACCACCTCAGTCTTCAACATACCG...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAACTAGTAAAGAGAGTTaGACTGTAGGCTTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTTSKES*TVGLRS
Trigger: ACTCCTCAAGCCTACAGTTCAACTCTCTTTACTAGT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGTACCTGAAGGCCGCTaGTGGTGTTTAATAACACTA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKVPEGR*WCLITL
Trigger: TAGTGTTATTAAACACCATCAGCGGCCTTCAGGTAC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACCAGTCAGTTGTGCCTaGATTGACTGGGTACCTGAA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKPVSCA*IDWVPE
Trigger: TTCAGGTACCCAGTCAATTCAGGCACAACTGACTGG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTTTAGGGGTCTTGGTTaGTGTCAGTGGTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKFRGLG*CQWLFC
Trigger: ACAGAACAACCACTGACATCAACCAAGACCCCTAAA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATCAGGAGTTACAGTCTaGGATGACCCAGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRSGVTV*DDPEKV
Trigger: GACTTTTTCTGGGTCATCTCAGACTGTAACTCCTGA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTCAGGAGTTACAGTCTaGGATGACCCAGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKSGVTV*DDPEKV
Trigger: GACTTTTTCTGGGTCATCTCAGACTGTAACTCCTGA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGATTGAGACTGACTTACTaGAGACAGATCTCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGLRLTY*RQISCL
Trigger: CAAACAAGAGATCTGTCTTCAGTAAGTCAGTCTCAA...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTCTTCTGATTACACTCTaGGAATATCTGTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEALLITL*EYLSSA
Trigger: GGCAGATGACAGATATTCTCAGAGTGTAATCAGAAG...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAGCAACCCCAATAACTTaGTCTTCAAGACGGGAATTA +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTATPIT*SSRREL
Trigger: TAATTCCCGTCTTGAAGATCAAGTTATTGGGGTTGC...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAAAGATGCCTTTACTTaGCCTAAACCTGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEKDAFT*PKPACS
Trigger: ACTGCAGGCAGGTTTAGGTCAAGTAAAGGCATCTTT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACTGAAGTCACATGCCTaGCATCTAATGACTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSELKSHA*HLMTAE
Trigger: TTCAGCAGTCATTAGATGTCAGGCATGTGACTTCAG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAAGGGCAGGTACTGGTaGAAGGTTCACAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKKGRYW*KVHSNL
Trigger: CAGGTTACTGTGAACCTTTCACCAGTACCTGCCCTT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCAGAGTCATTTTTGACTaGAGGGCAGGTACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSRVIFD*RAGTGE
Trigger: TTCACCAGTACCTGCCCTTCAGTCAAAAATGACTCT...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAGAGTCATTTTTGACTaGAGGGCAGGTACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDRVIFD*RAGTGE
Trigger: TTCACCAGTACCTGCCCTTCAGTCAAAAATGACTCT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCATCAAGAGTCATTTTTaGCTGAAGGGCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSIKSHF*LKGRYW
Trigger: CCAGTACCTGCCCTTCAGTCAAAAATGACTCTTGAT...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGGTAAATTCACTCTCTaGTGTAGCATTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAGKFTL*CSILST
Trigger: AGTGGAGAGAATGCTACATCAGAGAGTGAATTTACC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATGTGGGTGTTGTAGATaGAGGCTTGGGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKCGCCR*RLGKWW
Trigger: CCACCACTTCCCAAGCCTTCATCTACAACACCCACA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATGCACCCACAGTGGTTaGGGAAGTAGTAGCAGTACC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKCTHSG*GSSSST
Trigger: GGTACTGCTACTACTTCCTCAACCACTGTGGGTGCA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACATTTTGCAAACTGGTCTaGAGGAAGACCATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTFCKLV*RKTIKF
Trigger: GAACTTGATGGTCTTCCTTCAGACCAGTTTGCAAAA...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGCAGCAAATTCTCTTTaGCCATCTCGAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAAANSL*PSRISG
Trigger: TCCTGAAATTCGAGATGGTCAAAGAGAATTTGCTGC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATCCACTACTTGACATCTaGTTATCTTTGACCACCCCA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDPLLDI*LSLTTP
Trigger: TGGGGTGGTCAAAGATAATCAGATGTCAAGTAGTGG...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACCACTACTTGACATCTaGTTATCTTTGACCACCCCA +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEPLLDI*LSLTTP
Trigger: TGGGGTGGTCAAAGATAATCAGATGTCAAGTAGTGG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGTCTTATTTGGGCATTaGGCAGTAACACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVVLFGH*AVTLLS
Trigger: AGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGAC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGATCAAATGAGAGAAGATaGTGCATCTACACAATAGGG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGSNERR*CIYTIG
Trigger: CCCTATTGTGTAGATGCATCATCTTCTCTCATTTGA...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGTGTTATGGACCAAATaGAAACGCTGGACTACAAAT +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGVLWTK*KRWTTN
Trigger: ATTTGTAGTCCAGCGTTTTCATTTGGTCCATAACAC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATCCTACAAGAGGTGGTaGGGCTCGGGTAAATCTGAG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKSYKRW*GSGKSE
Trigger: CTCAGATTTACCCGAGCCTCACCACCTCTTGTAGGA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAAGCTGATGAGAGGCTaGAAAACTCTGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKKLMRG*KTLSLK
Trigger: CTTCAGAGACAGAGTTTTGCAGCCTCTCATCAGCTT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATACTTAATACAGAACTaGCCAGGCGCTCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEYLIQN*PGAQMP
Trigger: TGGCATTTGAGCGCCTGGGCAGTTCTGTATTAAGTA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTGGACCTTGGACTCATaGACCTTAAGTATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDWTLDS*TLSMRG
Trigger: TCCTCTCATACTTAAGGTGCATGAGTCCAAGGTCCA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCATCACTAAGAAGCACTaGCTCTGGGAAACACATCGA +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFITKKH*LWETHR
Trigger: TCGATGTGTTTCCCAGAGGCAGTGCTTCTTAGTGAT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAATCACTAAGAAGCACTaGCTCTGGGAAACACATCGA +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEITKKH*LWETHR
Trigger: TCGATGTGTTTCCCAGAGGCAGTGCTTCTTAGTGAT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGGCCAACAGTGCAAGTaGACTCCTAGCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKGQQCK*TPSWVH
Trigger: ATGAACCCAGCTAGGAGTGCACTTGCACTGTTGGCC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAGAGTGGAAAACTGCTaGTTGGGCCCGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKRVENC*LGPDFR
Trigger: TCTGAAATCCGGGCCCAAGCAGCAGTTTTCCACTCT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGCAAGAGTGGAAAACTaGTGCTTGGGCCCGGATTTC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKARVEN*CLGPDF
Trigger: GAAATCCGGGCCCAAGCAGCAGTTTTCCACTCTTGC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAAAGTAGCTCATCATTaGTCTTCTCTAAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGKVAHH*SSLRLA
Trigger: TGCAAGCCTTAGAGAAGAGCAATGATGAGCTACTTT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGACAAACATATGGTTTCTaGCACTTCTCTGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGQTYGF*HFSVIL
Trigger: CAGAATGACAGAGAAGTGGCAGAAACCATATGTTTG...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTATACTATCATATGGCTaGTTCCTACTCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAILSYG*FLLLST
Trigger: AGTGGAGAGGAGTAGGAAGCAGCCATATGATAGTAT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGTTGGAACAGTTCCCTaGGAAGTCTTGATTTGTAGC +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSVGTVP*EVLICS
Trigger: GCTACAAATCAAGACTTCCCAGGGAACTGTTCCAAC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAGTTCCACTGAGACCTaGGAGGTCTTCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDSSTET*EVFCCN
Trigger: ATTACAACAGAAGACCTCCCAGGTCTCAGTGGAACT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAGTTCCACTGAGACCTaGGAGGTCTTCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKSSTET*EVFCCN
Trigger: ATTACAACAGAAGACCTCCCAGGTCTCAGTGGAACT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCAGACTGTTTCTTGAATaGGCCAGAACTTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFRLFLE*ARTLLL
Trigger: CAGGAGCAAAGTTCTGGCCCATTCAAGAAACAGTCT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAGACTGTTTCTTGAATaGGCCAGAACTTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRRLFLE*ARTLLL
Trigger: CAGGAGCAAAGTTCTGGCCCATTCAAGAAACAGTCT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATTCTGGCGTTTGCCTTaGGCAGGTCTTTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKFWRLP*AGLFSC
Trigger: ACAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAATATCTGTTCCCCTTaGATTCTGGCGTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKNICSP*ILAFAL
Trigger: CAAGGCAAACGCCAGAATCCAAGGGGAACAGATATT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCTTTCCGTTTCTTTGGTaGTGGCTCAGCCTTTACTTT +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVFPFLW*WLSLYF
Trigger: AAAGTAAAGGCTGAGCCACCACCAAAGAAACGGAAA...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATACTTCTCTGTCATTCTaGTGTTTAGCCGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDTSLSF*CLAGVR
Trigger: TCTGACTCCGGCTAAACACCAGAATGACAGAGAAGT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATACTTTCCTGGGTTGTaGCAACATGTGCTTTACCTC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEYFPGL*QHVLYL
Trigger: GAGGTAAAGCACATGTTGCCACAACCCAGGAAAGTA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGATCCAAAGTCATGGGTTaGGATATAGCTGCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGSKVMG*DIAALK
Trigger: CTTTAAAGCAGCTATATCCCAACCCATGACTTTGGA...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CAA 72 bp TGCCACATTAGGAAATGTAGTTCCCTACTCTGCACTTaGGAAACGAAAGACATCAATTCTGTCCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: CHIRKCSSLLCT*ETKDINSVQSQ
Trigger: TTGACTCTGGACAGAATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGGAACTACATTTCCTAATGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAATCTGTTTCAGAGTGTaGGGGATGTCCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRICFRV*GMSFFI
Trigger: TATGAAGAAGGACATCCCTCACACTCTGAAACAGAT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATATCTGTTTCAGAGTGTaGGGGATGTCCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDICFRV*GMSFFI
Trigger: TATGAAGAAGGACATCCCTCACACTCTGAAACAGAT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACATGTAGTGTTAAAAGTTaGATCCTGAAGCACCAAAGG +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTCSVKS*ILKHQR
Trigger: CCTTTGGTGCTTCAGGATTCAACTTTTAACACTACA...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGGAGGAATTATACTTTaGGGTTTAGGGGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSGGIIL*GLGVLV
Trigger: AACCAAGACCCCTAAACCTCAAAGTATAATTCCTCC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGGACCTATAAACCTGTaGATGAACAATAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKGPINL*MNNRWH
Trigger: GTGCCATCTATTGTTCATTCACAGGTTTATAGGTCC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGGACCTATAAACCTGTaGATGAACAATAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSGPINL*MNNRWH
Trigger: GTGCCATCTATTGTTCATTCACAGGTTTATAGGTCC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCTTGAGACTGACTTACTaGAGACAGATCTCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVLRLTY*RQISCL
Trigger: CAAACAAGAGATCTGTCTTCAGTAAGTCAGTCTCAA...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAGATGGATACACATCTaGGTCAAGCTTTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSERWIHI*VKLSFS
Trigger: GCTGAAAGAAAGCTTGACTCAGATGTGTATCCATCT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACTTCTGATTACACTCTaGGAATATCTGTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSELLITL*EYLSSA
Trigger: GGCAGATGACAGATATTCTCAGAGTGTAATCAGAAG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGACGGGAATTACTTCTaGTTACACTCTGAGAATATC +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEADGNYF*LHSENI
Trigger: GATATTCTCAGAGTGTAATCAGAAGTAATTCCCGTC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGCAACCCCAATAACTTaGTCTTCAAGACGGGAATTA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKATPIT*SSRREL
Trigger: TAATTCCCGTCTTGAAGATCAAGTTATTGGGGTTGC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGAAGCATTAATTATTTaGTCGTGCTGTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEEALII*SCCSWT
Trigger: GGTCCAGGAACAGCACGATCAAATAATTAATGCTTC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTGGTCCAACCACTGCTaGAGTTACTTTAGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSWSNHC*SYFSWY
Trigger: ATACCAACTAAAGTAACTTCAGCAGTGGTTGGACCA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTGGTCCAACCACTGCTaGAGTTACTTTAGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFWSNHC*SYFSWY
Trigger: ATACCAACTAAAGTAACTTCAGCAGTGGTTGGACCA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGGTAAATTCACTCTCTaGTGTAGCATTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDGKFTL*CSILST
Trigger: AGTGGAGAGAATGCTACATCAGAGAGTGAATTTACC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAATCATGGCAGCTTTCTaGGGAAGGAGGAGTATACGG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKIMAAF*GRRSIR
Trigger: CCGTATACTCCTCCTTCCTCAGAAAGCTGCCATGAT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTATTATCAACTTTATCTaGTGGACTGTTACCGCCAGT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAIINFI*WTVTAS
Trigger: ACTGGCGGTAACAGTCCATCAGATAAAGTTGATAAT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATTTTGCAAACTGGTCTaGAGGAAGACCATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRFCKLV*RKTIKF
Trigger: GAACTTGATGGTCTTCCTTCAGACCAGTTTGCAAAA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGCAGCAAATTCTCTTTaGCCATCTCGAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKAANSL*PSRISG
Trigger: TCCTGAAATTCGAGATGGTCAAAGAGAATTTGCTGC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCTACTTGGCTTAGCTTaGACAGTTCTGATAGTTTGT +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVLLGLA*TVLIVC
Trigger: ACAAACTATCAGAACTGTTCAAGCTAAGCCAAGTAG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATGTTCAAAAAGCGAGTaGCAAAGGGAGCGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKCSKSE*QREREV
Trigger: AACCTCCCGCTCCCTTTGTCACTCGCTTTTTGAACA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCACATCTGATTATCTTTaGCCACCCCATATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFTSDYL*PPHICH
Trigger: ATGGCAGATATGGGGTGGTCAAAGATAATCAGATGT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGTCTTATTTGGGCATTaGGCAGTAACACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEVLFGH*AVTLLS
Trigger: AGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGAC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGACTGTTAAGCAACGCATaGCTGTATTTAACTTCATAC +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGLLSNA*LYLTSY
Trigger: GTATGAAGTTAAATACAGTCATGCGTTGCTTAACAG...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGCAGCAGCCACTCATCTaGACTAGTAATAAACACCAA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKQQPLI*TSNKHQ
Trigger: TTGGTGTTTATTACTAGTTCAGATGAGTGGCTGCTG...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATGCGTCAAATGCGACTaGCACAGAAGCAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKCVKCD*HRSSYP
Trigger: AGGATAACTGCTTCTGTGTCAGTCGCATTTGACGCA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAGCAATTTCTCAACCTTaGTGGACCTATAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRAISQP*WTYKPV
Trigger: CACAGGTTTATAGGTCCAGCAAGGTTGAGAAATTGC...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAGAGTGGAAAACTGCTaGTTGGGCCCGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKRVENC*LGPDFR
Trigger: TCTGAAATCCGGGCCCAAGCAGCAGTTTTCCACTCT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGAGTGGAGAGGTTCTTaGTTAACTGCACCCACAGTG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKEWRGS*LTAPTV
Trigger: CACTGTGGGTGCAGTTAAGCAAGAACCTCTCCACTC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAAGCAGTCAGAGAATTaGACCAATTCCACATCCAGT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDKQSEN*TNSTSS
Trigger: ACTGGATGTGGAATTGGTGCAATTCTCTGACTGCTT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGGAAACATCTTTGTTTaGCACGAGGCATATCATGAA +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVGNIFV*HEAYHE
Trigger: TTCATGATATGCCTCGTGGCAAACAAAGATGTTTCC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAACTTGGCCAATTTGTTaGTTAAGTTGTGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGTWPIC*LSCVTE
Trigger: TTCAGTGACACAACTTAACCAACAAATTGGCCAAGT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATTCTGGCGTTTGCCTTaGGCAGGTCTTTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKFWRLP*AGLFSC
Trigger: ACAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATTCGTACAGCAAGAGTaGAAAACTGCTGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKFVQQE*KTAAWA
Trigger: GGCCCAAGCAGCAGTTTTCCACTCTTGCTGTACGAA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAGGCTTGGGAAGTGGTaGGGGACAAAATGTACGAAC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKRLGKW*GTKCTN
Trigger: GTTCGTACATTTTGTCCCCCACCACTTCCCAAGCCT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATCACGCTCTCTGTATTaGCCTTCTCCTCCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKSRSLY*PSPPLS
Trigger: AGAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATTTCCGTTTCTTTGGTaGTGGCTCAGCCTTTACTTT +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRFPFLW*WLSLYF
Trigger: AAAGTAAAGGCTGAGCCACCACCAAAGAAACGGAAA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTTCACTACTACTAGTATaGATCTCAGGAGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEASLLLV*ISGDES
Trigger: TGACTCATCTCCTGAGATCCATACTAGTAGTAGTGA...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTCAACTGTATTTTCTCTaGATCGACAGCAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAQLYFL*IDSKLL
Trigger: CAAGAGTTTGCTGTCGATCCAGAGAAAATACAGTTG...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAGTGTGTATAAAGGCTaGAAAGGCACCAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDSVYKG*KGTKRR
Trigger: TCTCCTTTTGGTGCCTTTCCAGCCTTTATACACACT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGTCAATACTATCATATaGCTGCTTCCTACTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFVNTII*LLPTPL
Trigger: GAGAGGAGTAGGAAGCAGCCATATGATAGTATTGAC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTCAAAGCGATAACTCATaGACGGCTGTCATAATAACA +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAQSDNS*TAVIIT
Trigger: TGTTATTATGACAGCCGTCCATGAGTTATCGCTTTG...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGACGGGAATTACTTCTaGTTACACTCTGAGAATATC +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFDGNYF*LHSENI
Trigger: GATATTCTCAGAGTGTAATCAGAAGTAATTCCCGTC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCATAGAGTTAAAATCTaGAGTCACATGCCTGACATC +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFHRVKI*SHMPDI
Trigger: GATGTCAGGCATGTGACTTCAGATTTTAACTCTATG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCCATAGAGTTAAAATCTaGAGTCACATGCCTGACATC +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSHRVKI*SHMPDI
Trigger: GATGTCAGGCATGTGACTTCAGATTTTAACTCTATG...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAATTATCAACTTTATCTaGTGGACTGTTACCGCCAGT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEIINFI*WTVTAS
Trigger: ACTGGCGGTAACAGTCCATCAGATAAAGTTGATAAT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAAATATTTACTGCATATaGAGTAGAGTGGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTNIYCI*SRVERF
Trigger: GAACCTCTCCACTCTACTTCATATGCAGTAAATATT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAATATTTACTGCATATaGAGTAGAGTGGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVNIYCI*SRVERF
Trigger: GAACCTCTCCACTCTACTTCATATGCAGTAAATATT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATCTACTTGGCTTAGCTTaGACAGTTCTGATAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDLLGLA*TVLIVC
Trigger: ACAAACTATCAGAACTGTTCAAGCTAAGCCAAGTAG...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTTTTGTGGCCAGATGTaGGTACAAACATATGGTTTC +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFFCGQM*VQTYGF
Trigger: GAAACCATATGTTTGTACTCACATCTGGCCACAAAA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAGAAACTTCCATTACTaGGTACCTAGTCTAATGGCA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDRNFHY*VPSLMA
Trigger: TGCCATTAGACTAGGTACTCAGTAATGGAAGTTTCT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTCAAATGAGAGAAGATaGTGCATCTACACAATAGGG +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKSNERR*CIYTIG
Trigger: CCCTATTGTGTAGATGCATCATCTTCTCTCATTTGA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACTGTTAAGCAACGCATaGCTGTATTTAACTTCATAC +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTLLSNA*LYLTSY
Trigger: GTATGAAGTTAAATACAGTCATGCGTTGCTTAACAG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGTGTTATGGACCAAATaGAAACGCTGGACTACAAAT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEVLWTK*KRWTTN
Trigger: ATTTGTAGTCCAGCGTTTTCATTTGGTCCATAACAC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATACTTAATACAGAACTaGCCAGGCGCTCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKYLIQN*PGAQMP
Trigger: TGGCATTTGAGCGCCTGGGCAGTTCTGTATTAAGTA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAAGATCAAGGGTAGCTaGATTATTGACTTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRKIKGS*IIDLAN
Trigger: ATTGGCCAAGTCAATAATGCAGCTACCCTTGATCTT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAGTATGAGAGGATGTTaGTGCTTTAAGTCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGSMRGC*CFKSLV
Trigger: TACTAAAGACTTAAAGCAGCAACATCCTCTCATACT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAAATCTGAAGTCACATaGCTGACATCTAATGACTGC +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDKSEVT*LTSNDC
Trigger: GCAGTCATTAGATGTCAGGCATGTGACTTCAGATTT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAATCTTGACACTGACTaGATCCCCAGATTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKNLDTD*IPRLGH
Trigger: ATGGCCCAATCTGGGGATGCAGTCAGTGTCAAGATT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATTGGATTCTGGCGTTTaGCTTGGGCAGGTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKLDSGV*LGQVFS
Trigger: TGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACTCTTCTCTAAGGCTTaGATTGTGTCAGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKLFSKA*IVSGSK
Trigger: CTTGGACCCTGACACAATGCAAGCCTTAGAGAAGAG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAGTTCCTCCACTCTTTaGTTTAGAATCTCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVSSSTL*FRISSN
Trigger: ATTACTCGAGATTCTAAAGCAAAGAGTGGAGGAACT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGACAGCAAACTCTTGTaGAGATTTGGTGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKDSKLL*RFGGCF
Trigger: AAAACAACCACCAAATCTGCACAAGAGTTTGCTGTC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCAAACATATGGTTTCTaGCACTTCTCTGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFQTYGF*HFSVIL
Trigger: CAGAATGACAGAGAAGTGGCAGAAACCATATGTTTG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGGAAACATCTTTGTTTaGCACGAGGCATATCATGAA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDGNIFV*HEAYHE
Trigger: TTCATGATATGCCTCGTGGCAAACAAAGATGTTTCC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTTCGCACAACGGAATTaGCTAACAATGCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDFAQRN*LTMHFS
Trigger: TGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTTCGCACAACGGAATTaGCTAACAATGCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSFAQRN*LTMHFS
Trigger: TGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGGTTGTGGCAACATGTaGTTTACCTCTTTAACTCTA +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSGCGNM*FTSLTL
Trigger: TAGAGTTAAAGAGGTAAAGCACATGTTGCCACAACC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTACACTGTTCATTTGTaGAGTTATGCGTCAAATGCG +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKYTVHL*SYASNA
Trigger: CGCATTTGACGCATAACTGCACAAATGAACAGTGTA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTACACTGTTCATTTGTaGAGTTATGCGTCAAATGCG +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDYTVHL*SYASNA
Trigger: CGCATTTGACGCATAACTGCACAAATGAACAGTGTA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAAATGCCAAAGCAGTTaGAACAGTTCCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKKCQSS*NSSLGS
Trigger: ACTTCCCAGGGAACTGTTCCAACTGCTTTGGCATTT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTATTTCTCAACCTTGCTaGACCTATAAACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAISQPC*TYKPVN
Trigger: ATTCACAGGTTTATAGGTCCAGCAAGGTTGAGAAAT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTTGTTTTATACAAGGGTaGCAATTTCTCAACCTTGCT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEACFIQG*QFLNLA
Trigger: AGCAAGGTTGAGAAATTGCCACCCTTGTATAAAACA...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATTCAGCATAAGACTTTaGGTCAGGGGAAGTTATGTT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEFSIRL*VRGSYV
Trigger: AACATAACTTCCCCTGACCCAAAGTCTTATGCTGAA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCCTTCAACAGCCTGCATaGTTTCATTTGAAGTTGACT +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSLQQPA*FHLKLT
Trigger: AGTCAACTTCAAATGAAACCATGCAGGCTGTTGAAG...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTTTTACTGCTACTACTTaGCTTAGCTTGAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAFTATT*LSLNSS
Trigger: AGAACTGTTCAAGCTAAGCCAAGTAGTAGCAGTAAA...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACCGTTTCTTTGGTGGTaGCTCAGCCTTTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKPFLWW*LSLYFW
Trigger: CCAAAAGTAAAGGCTGAGCCACCACCAAAGAAACGG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATCACTACTACTAGTATaGATCTCAGGAGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSESLLLV*ISGDES
Trigger: TGACTCATCTCCTGAGATCCATACTAGTAGTAGTGA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACAACTGTATTTTCTCTaGATCGACAGCAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEQLYFL*IDSKLL
Trigger: CAAGAGTTTGCTGTCGATCCAGAGAAAATACAGTTG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACCCTACTCTGCACTTTaGAAACGAAAGACATCAATT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEPYSAL*KRKTSI
Trigger: AATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACCCTACTCTGCACTTTaGAAACGAAAGACATCAATT +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRPYSAL*KRKTSI
Trigger: AATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGG...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCAAAGCGATAACTCATaGACGGCTGTCATAATAACA +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFQSDNS*TAVIIT
Trigger: TGTTATTATGACAGCCGTCCATGAGTTATCGCTTTG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTTTAAAAATACTTTCCTaGGTTGTGGCAACATGTGCT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEALKILS*VVATCA
Trigger: AGCACATGTTGCCACAACCCAGGAAAGTATTTTTAA...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATGCCTGGTTGTTTCCTaGAAATTAACTACACTTGAA +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSECLVVS*KLTTLE
Trigger: TTCAAGTGTAGTTAATTTTCAGGAAACAACCAGGCA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAATTCTCATTTGTAACTaGAGACAATACCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRILICN*RQYLLL
Trigger: CAGCAAGAGGTATTGTCTTCAGTTACAAATGAGAAT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAGGTTCACAGTAACCTaGTTTCCATTTAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRRFTVT*FPFKEV
Trigger: TACTTCCTTAAATGGAAATCAGGTTACTGTGAACCT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGTTTCAATGTGCTGTTaGTCAAGAGTCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFVSMCC*SRVIFD
Trigger: GTCAAAAATGACTCTTGATCAACAGCACATTGAAAC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGTTTCAATGTGCTGTTaGTCAAGAGTCATTTTTGAC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEVSMCC*SRVIFD
Trigger: GTCAAAAATGACTCTTGATCAACAGCACATTGAAAC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTCTGCATCTCTCATATaGGTTAGGCAAAATGAATCT +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKSASLI*VRQNES
Trigger: AGATTCATTTTGCCTAACTCATATGAGAGATGCAGA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTCTGCATCTCTCATATaGGTTAGGCAAAATGAATCT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDSASLI*VRQNES
Trigger: AGATTCATTTTGCCTAACTCATATGAGAGATGCAGA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCAAGACTGAGGTGGTATaGTGTTACTTAATACAGAAC +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFKTEVV*CYLIQN
Trigger: GTTCTGTATTAAGTAACAGCATACCACCTCAGTCTT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAAGACTGAGGTGGTATaGTGTTACTTAATACAGAAC +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRKTEVV*CYLIQN
Trigger: GTTCTGTATTAAGTAACAGCATACCACCTCAGTCTT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACATGTAGAATAAATTTGTaGTTGGCCCGATATTACAGA +
Preference number: 4 (lower is better)
Translates to: PRVYTVHLCSYASNATDTCRINL*LARYYR
Trigger: TCTGTAATATCGGGCCAAGCACAAATTTATTCTACA...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGGAAAACCATCTTCTTaGTTTGAAGATGGATACACA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKGKPSS*FEDGYT
Trigger: TGTGTATCCATCTTCAAAGCAAGAAGATGGTTTTCC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCAACACCTGTAACTCTTaGATTGGAAAACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFNTCNS*IGKPSS
Trigger: AGAAGATGGTTTTCCAATGCAAGAGTTACAGGTGTT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAACACCTGTAACTCTTaGATTGGAAAACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRNTCNS*IGKPSS
Trigger: AGAAGATGGTTTTCCAATGCAAGAGTTACAGGTGTT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTATGAGAGGATGTTGCTaGTTTAAGTCTTTAGTATTC +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAMRGCC*FKSLVF
Trigger: GAATACTAAAGACTTAAAGCAGCAACATCCTCTCAT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAATCTTCCTCTTTAACTTaGCCTTTTCCTTTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSESSSLT*PFPLAL
Trigger: AAGAGCTAAAGGAAAAGGGCAAGTTAAAGAGGAAGA...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTCTTCCTCTTTAACTTaGCCTTTTCCTTTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFSSSLT*PFPLAL
Trigger: AAGAGCTAAAGGAAAAGGGCAAGTTAAAGAGGAAGA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATATTTCTCAACCTTGCTaGACCTATAAACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDISQPC*TYKPVN
Trigger: ATTCACAGGTTTATAGGTCCAGCAAGGTTGAGAAAT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTGTTTTATACAAGGGTaGCAATTTCTCAACCTTGCT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDCFIQG*QFLNLA
Trigger: AGCAAGGTTGAGAAATTGCCACCCTTGTATAAAACA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACCATCAGATAGCCTTTaGGTTGATGACTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKPSDSL*VDDSRD
Trigger: ATCTCTTGAGTCATCAACCCAAAGGCTATCTGATGG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAACTTGGCCAATTTGTTaGTTAAGTTGTGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSETWPIC*LSCVTE
Trigger: TTCAGTGACACAACTTAACCAACAAATTGGCCAAGT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGCTGCATTATTGACTTaGCCAATTTGTTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEAALLT*PICWLS
Trigger: ACTTAACCAACAAATTGGCCAAGTCAATAATGCAGC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAGCTGCATTATTGACTTaGCCAATTTGTTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRAALLT*PICWLS
Trigger: ACTTAACCAACAAATTGGCCAAGTCAATAATGCAGC...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTATCATTTATATTCTGTaGCTTTCCTACTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAIIYIL*LSYCSC
Trigger: ACAGCTACAGTAGGAAAGCCACAGAATATAAATGAT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAATATCTGTTCCCCTTaGATTCTGGCGTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKNICSP*ILAFAL
Trigger: CAAGGCAAACGCCAGAATCCAAGGGGAACAGATATT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATTTTACTGCTACTACTTaGCTTAGCTTGAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDFTATT*LSLNSS
Trigger: AGAACTGTTCAAGCTAAGCCAAGTAGTAGCAGTAAA...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACTCAGCCTTTACTTTTaGCTGTTTAACTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSELSLYF*LFNFGF
Trigger: AAACCCAAAGTTAAACAGCCAAAAGTAAAGGCTGAG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTATTAGGGTAAAAATGTaGTGGGATTTAGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAIRVKM*WDLGPF
Trigger: AAATGGACCTAAATCCCACCACATTTTTACCCTAAT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGCAGTGCCAAAGGAAATaGGTTATTTTCTATGGGAAA +
Preference number: 4 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKQCQRK*VIFYGK
Trigger: TTTCCCATAGAAAATAACCCATTTCCTTTGGCACTG...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAGTGTAATACAGAAATaGGCAGTTTCTAGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSESVIQK*AVSSVN
Trigger: GTTGACACTAGAAACTGCCCATTTCTGTATTACACT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAGTGTAATACAGAAATaGGCAGTTTCTAGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDSVIQK*AVSSVN
Trigger: GTTGACACTAGAAACTGCCCATTTCTGTATTACACT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATCAGAAGCAGTTATCCTaGGATATTTCACTCTATATG +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDQKQLS*DISLYM
Trigger: CATATAGAGTGAAATATCCCAGGATAACTGCTTCTG...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACAGAAGCAGTTATCCTaGGATATTTCACTCTATATG +
Preference number: 4 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEQKQLS*DISLYM
Trigger: CATATAGAGTGAAATATCCCAGGATAACTGCTTCTG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CAA 72 bp AAGACAATAGCAATATCCGCGTGTCTTATTTGGGCATaGAGCAGTAACACTGCTTTCTTGATAGGATTTAAG +
Preference number: 4 (lower is better)
Translates to: KTIAISACLIWA*SSNTAFLIGFK
Trigger: CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGCGGATATTGCTATTGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
3UTR CAA 72 bp AATACTATCATATGGCTGCTTCCTACTCCTCTCCACTaGGAAAATTCATTTTATGATGCTCCCACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: NTIIWLLPTPLH*ENSFYDAPTVD
Trigger: ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAGCAGCCATATGATAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATGTAGTGTTAAAAGTTaGATCCTGAAGCACCAAAGG +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKCSVKS*ILKHQR
Trigger: CCTTTGGTGCTTCAGGATTCAACTTTTAACACTACA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGGTAAATTCACTCTCTaGTGTAGCATTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKGKFTL*CSILST
Trigger: AGTGGAGAGAATGCTACATCAGAGAGTGAATTTACC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATTTTGCAAACTGGTCTaGAGGAAGACCATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKFCKLV*RKTIKF
Trigger: GAACTTGATGGTCTTCCTTCAGACCAGTTTGCAAAA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGCAGCAAATTCTCTTTaGCCATCTCGAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKAANSL*PSRISG
Trigger: TCCTGAAATTCGAGATGGTCAAAGAGAATTTGCTGC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAGAAACTTCCATTACTaGGTACCTAGTCTAATGGCA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKRNFHY*VPSLMA
Trigger: TGCCATTAGACTAGGTACTCAGTAATGGAAGTTTCT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATATGAGAGGATGTTGCTaGTTTAAGTCTTTAGTATTC +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDMRGCC*FKSLVF
Trigger: GAATACTAAAGACTTAAAGCAGCAACATCCTCTCAT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAAATCTGAAGTCACATaGCTGACATCTAATGACTGC +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKKSEVT*LTSNDC
Trigger: GCAGTCATTAGATGTCAGGCATGTGACTTCAGATTT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAAAGTAGCTCATCATTaGTCTTCTCTAAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKKVAHH*SSLRLA
Trigger: TGCAAGCCTTAGAGAAGAGCAATGATGAGCTACTTT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAGACAGCAAACTCTTGTaGAGATTTGGTGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKDSKLL*RFGGCF
Trigger: AAAACAACCACCAAATCTGCACAAGAGTTTGCTGTC...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACTTCAACAGCCTGCATaGTTTCATTTGAAGTTGACT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKLQQPA*FHLKLT
Trigger: AGTCAACTTCAAATGAAACCATGCAGGCTGTTGAAG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATTTCCGTTTCTTTGGTaGTGGCTCAGCCTTTACTTT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKFPFLW*WLSLYF
Trigger: AAAGTAAAGGCTGAGCCACCACCAAAGAAACGGAAA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATATTAGGGTAAAAATGTaGTGGGATTTAGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDIRVKM*WDLGPF
Trigger: AAATGGACCTAAATCCCACCACATTTTTACCCTAAT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAGTGAGTACAAACATATaGTTTCTGCCACTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKVSTNI*FLPLLC
Trigger: ACAGAGAAGTGGCAGAAACCATATGTTTGTACTCAC...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTTTAGGAACGTAGGCTaGAAGAGTAATATAAAGATG +
Preference number: 4 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSFRNVG*KSNIKM
Trigger: CATCTTTATATTACTCTTCCAGCCTACGTTCCTAAA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTTTAGGAACGTAGGCTaGAAGAGTAATATAAAGATG +
Preference number: 4 (lower is better)
Translates to: CHEAYHEENVASEFKHRFFRNVG*KSNIKM
Trigger: CATCTTTATATTACTCTTCCAGCCTACGTTCCTAAA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATGCCTGGTTGTTTCCTaGAAATTAACTACACTTGAA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKCLVVS*KLTTLE
Trigger: TTCAAGTGTAGTTAATTTTCAGGAAACAACCAGGCA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAGGTTCACAGTAACCTaGTTTCCATTTAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKRFTVT*FPFKEV
Trigger: TACTTCCTTAAATGGAAATCAGGTTACTGTGAACCT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAATTATCAACTTTATCTaGTGGACTGTTACCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKIINFI*WTVTAS
Trigger: ACTGGCGGTAACAGTCCATCAGATAAAGTTGATAAT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACTACTTGGCTTAGCTTaGACAGTTCTGATAGTTTGT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKLLGLA*TVLIVC
Trigger: ACAAACTATCAGAACTGTTCAAGCTAAGCCAAGTAG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAGGAAAACCATCTTCTTaGTTTGAAGATGGATACACA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKGKPSS*FEDGYT
Trigger: TGTGTATCCATCTTCAAAGCAAGAAGATGGTTTTCC...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAAAGTAGCTCATCATTaGTCTTCTCTAAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKKVAHH*SSLRLA
Trigger: TGCAAGCCTTAGAGAAGAGCAATGATGAGCTACTTT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAGTTCCTCCACTCTTTaGTTTAGAATCTCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKSSSTL*FRISSN
Trigger: ATTACTCGAGATTCTAAAGCAAAGAGTGGAGGAACT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGACAGCAAACTCTTGTaGAGATTTGGTGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKDSKLL*RFGGCF
Trigger: AAAACAACCACCAAATCTGCACAAGAGTTTGCTGTC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATCACTACTACTAGTATaGATCTCAGGAGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKSLLLV*ISGDES
Trigger: TGACTCATCTCCTGAGATCCATACTAGTAGTAGTGA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACAACTGTATTTTCTCTaGATCGACAGCAAACTCTTG +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKQLYFL*IDSKLL
Trigger: CAAGAGTTTGCTGTCGATCCAGAGAAAATACAGTTG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATTAAAAATACTTTCCTaGGTTGTGGCAACATGTGCT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKLKILS*VVATCA
Trigger: AGCACATGTTGCCACAACCCAGGAAAGTATTTTTAA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR TCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAATATTTACTGCATATaGAGTAGAGTGGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKNIYCI*SRVERF
Trigger: GAACCTCTCCACTCTACTTCATATGCAGTAAATATT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATGTAGAATAAATTTGTaGTTGGCCCGATATTACAGA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKCRINL*LARYYR
Trigger: TCTGTAATATCGGGCCAAGCACAAATTTATTCTACA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAGTATGAGAGGATGTTaGTGCTTTAAGTCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKSMRGC*CFKSLV
Trigger: TACTAAAGACTTAAAGCAGCAACATCCTCTCATACT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATCTTCCTCTTTAACTTaGCCTTTTCCTTTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKSSSLT*PFPLAL
Trigger: AAGAGCTAAAGGAAAAGGGCAAGTTAAAGAGGAAGA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR GCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAGTTCCTCCACTCTTTaGTTTAGAATCTCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKSSSTL*FRISSN
Trigger: ATTACTCGAGATTCTAAAGCAAAGAGTGGAGGAACT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAATCATTTATATTCTGTaGCTTTCCTACTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKIIYIL*LSYCSC
Trigger: ACAGCTACAGTAGGAAAGCCACAGAATATAAATGAT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATTTACTGCTACTACTTaGCTTAGCTTGAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKFTATT*LSLNSS
Trigger: AGAACTGTTCAAGCTAAGCCAAGTAGTAGCAGTAAA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACTCAGCCTTTACTTTTaGCTGTTTAACTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKLSLYF*LFNFGF
Trigger: AAACCCAAAGTTAAACAGCCAAAAGTAAAGGCTGAG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
3UTR CAA 72 bp TCACAATATAATTTGACACAAAAAGCAGTCAGAGAATaGCACCAATTCCACATCCAGTTTCCTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: SQYNLTQKAVRE*HQFHIQFPEHV
Trigger: AACATGTTCAGGAAACTGGATGTGGAATTGGTGCAATTCTCTGACTGCTTTTTGTGTCAAATTATATTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CCA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAAACATCATTTATTATaGCGATGTAAAGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKKHHLL*RCKAST
Trigger: GGTGCTTGCTTTACATCGCCATAATAAATGATGTTT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
34% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS CCA 90 bp TGCCCCCTCACATGGCCCCGGCGAGCAGGCGGGAGAAGGGCGCGCTaGCGAGTCTGGGCCGCAAAGACCCGGGCCGCGGCGGGCGGCGAG +
Preference number: 5 (lower is better)
Translates to: CPLTWPRRAGGRRAR*RVWAAKTRAAAGGE
Trigger: CTCGCCGCCCGCCGCGGCCCGGGTCTTTGCGGCCCAGACTCGCCAGCGCGCCCTTCTCCCGCCTGCTCGCCGGGGCCATGTGAGGGGGCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS CCA 90 bp TGGGGCTGCTGCCGCTACTGCAGCTGCCACTGCTGCAGCTGCTGCTaGCGGCGGCGGCGGCGGCTCGGGGTTCGTACGCCCAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: WGCCRYCSCHCCSCC*RRRRRLGVRTPRLG
Trigger: CCCCAGCCTGGGCGTACGAACCCCGAGCCGCCGCCGCCGCCGCCAGCAGCAGCTGCAGCAGTGGCAGCTGCAGTAGCGGCAGCAGCCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS CCA 90 bp GATGAAGGCTTGGGAAGTGGTGGGGGACAAAATGTACGAACCATCTaGGTCCCTGGCCGTCTAGTCCTGTTAGGCATTCGTACAGCAAGA +
Preference number: 5 (lower is better)
Translates to: DEGLGSGGGQNVRTI*VPGRLVLLGIRTAR
Trigger: TCTTGCTGTACGAATGCCTAACAGGACTAGACGGCCAGGGACCCAGATGGTTCGTACATTTTGTCCCCCACCACTTCCCAAGCCTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CCA 90 bp CTTGGGAAGTGGTGGGGGACAAAATGTACGAACCATCTGGGTCCCTaGCCGTCTAGTCCTGTTAGGCATTCGTACAGCAAGAGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: LGKWWGTKCTNHLGP*PSSPVRHSYSKSGK
Trigger: TTTTCCACTCTTGCTGTACGAATGCCTAACAGGACTAGACGGCCAGGGACCCAGATGGTTCGTACATTTTGTCCCCCACCACTTCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS-3UTR CAA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTGCTGTTCCTGGACCTaGGACTCATGCACCTTAAGT +
Preference number: 5 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRCCSWT*DSCTLS
Trigger: ACTTAAGGTGCATGAGTCCAAGGTCCAGGAACAGCA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGCAGTGTCCTGTCCTTTaGCAAACTGGTCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRQCPVL*QTGLKE
Trigger: TTCCTTCAGACCAGTTTGCAAAAGGACAGGACACTG...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS TCA 90 bp ACTGAGACCTGGGAGGTCTTCTGTTGTAATCCTCCGTTGCTCACCTaGGTGGAATCTCCAATTGGGCTACAGGATAAAGATGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: TETWEVFCCNPPLLT*VESPIGLQDKDDCL
Trigger: CAGGCAGTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGGATTACAACAGAAGACCTCCCAGGTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS GCA 90 bp TGGATTTGTCTTAAGAAGACAGGGTCTCTGTCACCCAAGCTAGAGTaGAGCAGCTGGATCATAGCTTATTGTAGCCTCCAACTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: WICLKKTGSLSPKLE*SSWIIAYCSLQLLG
Trigger: GCCCAGGAGTTGGAGGCTACAATAAGCTATGATCCAGCTGCTGCACTCTAGCTTGGGTGACAGAGACCCTGTCTTCTTAAGACAAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS CCA 90 bp AGACCTGGGAGGTCTTCTGTTGTAATCCTCCGTTGCTCACCTGAGTaGAATCTCCAATTGGGCTACAGGATAAAGATGACTGCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RPGRSSVVILRCSPE*NLQLGYRIKMTAWL
Trigger: CAACCAGGCAGTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGGATTACAACAGAAGACCTCCCAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGAGGGTAGCTGCATTATaGACTTGGCCAATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRRVAAL*TWPICW
Trigger: CCAACAAATTGGCCAAGTCAATAATGCAGCTACCCT...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGACTGCATCCCCAGATaGGGCCATGGCCAACAGTGC +
Preference number: 5 (lower is better)
Translates to: KGTKRRALQLPVLRVKEADCIPR*GHGQQC
Trigger: GCACTGTTGGCCATGGCCCAATCTGGGGATGCAGTC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS TCA 90 bp AGGCACAGCAAGAAGGCTCTCAACAGTCACCAGATACAGGTACCTTaGTCTTGGACTTCCCAGCCTCTAGAATATTCTGCTGCTCTGATC +
Preference number: 5 (lower is better)
Translates to: RHSKKALNSHQIQVP*SWTSQPLEYSAALI
Trigger: GATCAGAGCAGCAGAATATTCTAGAGGCTGGGAAGTCCAAGATCAAGGTACCTGTATCTGGTGACTGTTGAGAGCCTTCTTGCTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS GCA 90 bp GGTATGTTGAAGACTGAGGTGGTATGCTGTTACTTAATACAGAACTaGCCAGGCGCTCAAATGCCAAAGCAGTTGGAACAGTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GMLKTEVVCCYLIQN*PGAQMPKQLEQFPG
Trigger: CCCAGGGAACTGTTCCAACTGCTTTGGCATTTGAGCGCCTGGGCAGTTCTGTATTAAGTAACAGCATACCACCTCAGTCTTCAACATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS GCA 90 bp CAAGTTCCACTGAGACCTGGGAGGTCTTCTGTTGTAATCCTCCGTTaGTCACCTGAGTGGAATCTCCAATTGGGCTACAGGATAAAGATG +
Preference number: 5 (lower is better)
Translates to: QVPLRPGRSSVVILR*SPEWNLQLGYRIKM
Trigger: CATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGGATTACAACAGAAGACCTCCCAGGTCTCAGTGGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS CCA 90 bp GTTTCTATTGCTGAAGGTGGTGGGATGCTGATAAGCAGAGAGAGATaGTGGAAGTGTTCCAGTGCTTGGCAAAGGTCCAGTAGCAAACAG +
Preference number: 5 (lower is better)
Translates to: VSIAEGGGMLISRER*WKCSSAWQRSSSKQ
Trigger: CTGTTTGCTACTGGACCTTTGCCAAGCACTGGAACACTTCCACCATCTCTCTCTGCTTATCAGCATCCCACCACCTTCAGCAATAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000527250.5
ENST00000527788.5
ENST00000650167.2
CDS CCA 90 bp TCTTGGTTTTCTTCTTCAATCTTGACACTGACTGCATCCCCAGATTaGGCCATGGCCAACAGTGCAAGTGCACTCCTAGCTGGGTTCATT +
Preference number: 5 (lower is better)
Translates to: SWFSSSILTLTASPD*AMANSASALLAGFI
Trigger: AATGAACCCAGCTAGGAGTGCACTTGCACTGTTGGCCATGGCCCAATCTGGGGATGCAGTCAGTGTCAAGATTGAAGAAGAAAACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS-3UTR CAA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGCCTGTAACTCTTGCATaGGAAAACCATCTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRPVTLA*ENHLLA
Trigger: AGCAAGAAGATGGTTTTCCAATGCAAGAGTTACAGG...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGACTGCATCCCCAGATaGGGCCATGGCCAACAGTGC +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSDCIPR*GHGQQC
Trigger: GCACTGTTGGCCATGGCCCAATCTGGGGATGCAGTC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTGTCTTATTTGGGCATaGAGCAGTAACACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRCLIWA*SSNTAF
Trigger: GAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGGGCAGTATCATAGACTaGGCCTCCCATATTATGAAA +
Preference number: 5 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRGSIID*ASHIMK
Trigger: TTTCATAATATGGGAGGCCAAGTCTATGATACTGCC...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS TCA 90 bp GGAGCCCTGAATTGTGGTAAGAGAGTAGTTCCTGAAGCAGCAGCCTaGGCAGTTCGGGATTCAGCAGTAGACAGAAAATTCATCACTGAA +
Preference number: 5 (lower is better)
Translates to: GALNCGKRVVPEAAA*AVRDSAVDRKFITE
Trigger: TTCAGTGATGAATTTTCTGTCTACTGCTGAATCCCGAACTGCTCAGGCTGCTGCTTCAGGAACTACTCTCTTACCACAATTCAGGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000528155.1
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAATTCTGGCGTTTGCCTaGGGCAGGTCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGILAFA*GRSFQL
Trigger: CAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAAT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAACAACTGCAAGCAGTTaGAGGGCAACTGCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGTTASS*RATAVP
Trigger: TGGCACTGCAGTTGCCCTCAAACTGCTTGCAGTTGT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS GCA 90 bp ACAGGTACCTTGATCTTGGACTTCCCAGCCTCTAGAATATTCTGCTaGTCTGATCTTCTGGTGCTGCTAACTGAGACGCTTTGCATTTCT +
Preference number: 5 (lower is better)
Translates to: TGTLILDFPASRIFC*SDLLVLLTETLCIS
Trigger: AGAAATGCAAAGCGTCTCAGTTAGCAGCACCAGAAGATCAGAGCAGCAGAATATTCTAGAGGCTGGGAAGTCCAAGATCAAGGTACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS GCA 90 bp GATACAGGTACCTTGATCTTGGACTTCCCAGCCTCTAGAATATTCTaGTGCTCTGATCTTCTGGTGCTGCTAACTGAGACGCTTTGCATT +
Preference number: 5 (lower is better)
Translates to: DTGTLILDFPASRIF*CSDLLVLLTETLCI
Trigger: AATGCAAAGCGTCTCAGTTAGCAGCACCAGAAGATCAGAGCAGCAGAATATTCTAGAGGCTGGGAAGTCCAAGATCAAGGTACCTGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGAATGGGCCAGAACTTaGCTCCTGGACTTCATGACT +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGEWART*LLDFMT
Trigger: AGTCATGAAGTCCAGGAGCAAAGTTCTGGCCCATTC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TTCCAGAGGACTAACTTCGTTCCTAAAGGCCGCACCACTGTCCTTCAGCAGAGGTTTTCCTCCACCTCTTaGATCTTCTGTCTCATTTTT +
Preference number: 5 (lower is better)
Translates to: FQRTNFVPKGRTTVLQQRFSSTS*IFCLIF
Trigger: AAAAATGAGACAGAAGATCAAAGAGGTGGAGGAAAA...CCTCTGCTGAAGGACAGTGGTGCGGCCTTTAGGAACGAAGTTAGTCCTCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCATCACGCTCTCTGTATaGGCCTTCTCCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVITLSV*AFSSAF
Trigger: GAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGAT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACAAATGCCAAAGCAGTaGGAACAGTTCCCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTQMPKQ*EQFPGK
Trigger: CTTCCCAGGGAACTGTTCCAACTGCTTTGGCATTTG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGAGCTGAGCGGTATGTaGAAGACTGAGGTGGTATGC +
Preference number: 5 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDELSGM*KTEVVC
Trigger: GCATACCACCTCAGTCTTCAACATACCGCTCAGCTC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTCAGTTGTGCCTGAATaGACTGGGTACCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFSVVPE*TGYLKA
Trigger: GGCCTTCAGGTACCCAGTCAATTCAGGCACAACTGA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACCTGGACTTCATGACTaGGTCCAACCACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRPGLHD*VQPLLK
Trigger: CTTCAGCAGTGGTTGGACCAAGTCATGAAGTCCAGG...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGACTGCATCCCCAGATaGGGCCATGGCCAACAGTGC +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKDCIPR*GHGQQC
Trigger: GCACTGTTGGCCATGGCCCAATCTGGGGATGCAGTC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAATTCTGGCGTTTGCCTaGGGCAGGTCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEILAFA*GRSFQL
Trigger: CAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAAT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAGTGGAAAACTGCTGCTaGGGCCCGGATTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTVENCC*GPDFRK
Trigger: TTTTCTGAAATCCGGGCCCAAGCAGCAGTTTTCCAC...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAGAGTGGAGAGGTTCTaGCTTAACTGCACCCACAGT +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVRVERF*LNCTHS
Trigger: ACTGTGGGTGCAGTTAAGCAAGAACCTCTCCACTCT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAATCACGCTCTCTGTATaGGCCTTCTCCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEITLSV*AFSSAF
Trigger: GAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGAT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCACAACTGCAAGCAGTTaGAGGGCAACTGCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSTTASS*RATAVP
Trigger: TGGCACTGCAGTTGCCCTCAAACTGCTTGCAGTTGT...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS GCA 90 bp CCATCAGATAGCCTTTGGGTTGATGACTCAAGAGATGCTTGTGGCTaGAACACCTGTAACTCTTGCATTGGAAAACCATCTTCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: PSDSLWVDDSRDACG*NTCNSCIGKPSSCF
Trigger: AAAGCAAGAAGATGGTTTTCCAATGCAAGAGTTACAGGTGTTGCAGCCACAAGCATCTCTTGAGTCATCAACCCAAAGGCTATCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CCA 90 bp TTGGGAAGAATGCATAGAAATATAATTCTGGGTCGGGCTAGAGTCTaGCAAATTCTGAGCCCGAGAGGCAGAAGAATAAGAAAGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LGRMHRNIILGRARV*QILSPRGRRIRKRR
Trigger: CCTTCTCTTTCTTATTCTTCTGCCTCTCGGGCTCAGAATTTGCCAGACTCTAGCCCGACCCAGAATTATATTTCTATGCATTCTTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGTTCCCTGGGAAGTCTaGATTTGTAGCAAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAVPWEV*ICSKGS
Trigger: TGACCCTTTGCTACAAATCAAGACTTCCCAGGGAAC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATCAAATGCCAAAGCAGTaGGAACAGTTCCCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDQMPKQ*EQFPGK
Trigger: CTTCCCAGGGAACTGTTCCAACTGCTTTGGCATTTG...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGAGTGGAATCTCCAATaGGGCTACAGGATAAAGATG +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGEWNLQ*GYRIKM
Trigger: CATCTTTATCCTGTAGCCCAATTGGAGATTCCACTC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTGCTGTTCCTGGACCTaGGACTCATGCACCTTAAGT +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKCCSWT*DSCTLS
Trigger: ACTTAAGGTGCATGAGTCCAAGGTCCAGGAACAGCA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGATCAAGAGTCATTTTaGACTGAAGGGCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGDQESF*TEGQVL
Trigger: CAGTACCTGCCCTTCAGTCAAAAATGACTCTTGATC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGAATGGGCCAGAACTTaGCTCCTGGACTTCATGACT +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSEWART*LLDFMT
Trigger: AGTCATGAAGTCCAGGAGCAAAGTTCTGGCCCATTC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTGTAGCAGACTGTTTCTaGAATGGGCCAGAACTTTGC +
Preference number: 5 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAVADCF*NGPELC
Trigger: GCAAAGTTCTGGCCCATTCAAGAAACAGTCTGCTAC...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGTGGAAAACTGCTGCTaGGGCCCGGATTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEVENCC*GPDFRK
Trigger: TTTTCTGAAATCCGGGCCCAAGCAGCAGTTTTCCAC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAGAGTGGAGAGGTTCTaGCTTAACTGCACCCACAGT +
Preference number: 5 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDRVERF*LNCTHS
Trigger: ACTGTGGGTGCAGTTAAGCAAGAACCTCTCCACTCT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATCTCTAAGGCTTGCATaGTGTCAGGGTCCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRSLRLA*CQGPRQ
Trigger: TTGCCTTGGACCCTGACACAATGCAAGCCTTAGAGA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTCTCTAAGGCTTGCATaGTGTCAGGGTCCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSSLRLA*CQGPRQ
Trigger: TTGCCTTGGACCCTGACACAATGCAAGCCTTAGAGA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAAAGCAGTCAGAGAATaGCACCAATTCCACATCCAG +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGKAVRE*HQFHIQ
Trigger: CTGGATGTGGAATTGGTGCAATTCTCTGACTGCTTT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAATGATGCTCCCACTGTaGATACTCTGCATCTCTCAT +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGMMLPL*ILCISH
Trigger: ATGAGAGATGCAGAGTATCAACAGTGGGAGCATCAT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS GCA 90 bp GAGTATACGGTAAGTAAATATCTGTTCCCCTTGGATTCTGGCGTTTaGCTTGGGCAGGTCTTTTCAGCTGTTTCTGATTACTGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: EYTVSKYLFPLDSGV*LGQVFSAVSDYCCL
Trigger: AAGACAACAGTAATCAGAAACAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAACAGATATTTACTTACCGTATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS GCA 90 bp AATGCTAACAAGCAATTCCATGTAGCTCTTAAAGGTTTCCTTCATTaGTCTTGTGTTCAAAAAGCGAGTGACAAAGGGAGCGGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: NANKQFHVALKGFLH*SCVQKASDKGSGRF
Trigger: GAACCTCCCGCTCCCTTTGTCACTCGCTTTTTGAACACAAGAGCAATGAAGGAAACCTTTAAGAGCTACATGGAATTGCTTGTTAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CCA 90 bp TCTGTAAAACCTTCTATGGCAACAGTGTCCTGTCCTTTTGCAAACTaGTCTGAAGGAAGACCATCAAGTTCAATGGGCTTTGAGGATTCT +
Preference number: 5 (lower is better)
Translates to: SVKPSMATVSCPFAN*SEGRPSSSMGFEDS
Trigger: AGAATCCTCAAAGCCCATTGAACTTGATGGTCTTCCTTCAGACCAGTTTGCAAAAGGACAGGACACTGTTGCCATAGAAGGTTTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CCA 90 bp TCTATGTCTTCTATCTTTACCACAAATTCATCACGCTCTCTGTATTaGCCTTCTCCTCCGCTTTCTGTGTCCTCCTCATCTGTAAAACCT +
Preference number: 5 (lower is better)
Translates to: SMSSIFTTNSSRSLY*PSPPLSVSSSSVKP
Trigger: AGGTTTTACAGATGAGGAGGACACAGAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGATGAATTTGTGGTAAAGATAGAAGACATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGTTCCCTGGGAAGTCTaGATTTGTAGCAAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSVPWEV*ICSKGS
Trigger: TGACCCTTTGCTACAAATCAAGACTTCCCAGGGAAC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATCAGTTGTGCCTGAATaGACTGGGTACCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKSVVPE*TGYLKA
Trigger: GGCCTTCAGGTACCCAGTCAATTCAGGCACAACTGA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTCAGATAGCCTTTGGGTaGATGACTCAAGAGATGCTT +
Preference number: 5 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAQIAFG*MTQEML
Trigger: AAGCATCTCTTGAGTCATCAACCCAAAGGCTATCTG...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACAGATAGCCTTTGGGTaGATGACTCAAGAGATGCTT +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTQIAFG*MTQEML
Trigger: AAGCATCTCTTGAGTCATCAACCCAAAGGCTATCTG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAGGGATGTACTATTTGTaGAGGGCTTTGAACACGCTG +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRGMYYL*RALNTL
Trigger: CAGCGTGTTCAAAGCCCTCAACAAATAGTACATCCC...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGGGATGTACTATTTGTaGAGGGCTTTGAACACGCTG +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEGMYYL*RALNTL
Trigger: CAGCGTGTTCAAAGCCCTCAACAAATAGTACATCCC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAGAAGGGATGTACTATTaGTTGAGGGCTTTGAACACG +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTEGMYY*LRALNT
Trigger: CGTGTTCAAAGCCCTCAACAAATAGTACATCCCTTC...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGTTGTTGTAATGGTTTaGAAGACTCAGAGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGVVVMV*KTQRGP
Trigger: TGGACCTCTCTGAGTCTTCAAAACCATTACAACAAC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACCTGGACTTCATGACTaGGTCCAACCACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKPGLHD*VQPLLK
Trigger: CTTCAGCAGTGGTTGGACCAAGTCATGAAGTCCAGG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGTAGCAGACTGTTTCTaGAATGGGCCAGAACTTTGC +
Preference number: 5 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDVADCF*NGPELC
Trigger: GCAAAGTTCTGGCCCATTCAAGAAACAGTCTGCTAC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAAAATATCTGTTCCCCTaGGATTCTGGCGTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTKYLFP*DSGVCL
Trigger: AAGGCAAACGCCAGAATCCAAGGGGAACAGATATTT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGCAGTACCAGTAGTATaGGCAGTTGGGCTAGTAGTT +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKAVPVV*AVGLVV
Trigger: AACTACTAGCCCAACTGCCAATACTACTGGTACTGC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAGCAGTACCAGTAGTATaGGCAGTTGGGCTAGTAGTT +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRAVPVV*AVGLVV
Trigger: AACTACTAGCCCAACTGCCAATACTACTGGTACTGC...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACAGTGTCCTGTCCTTTaGCAAACTGGTCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEQCPVL*QTGLKE
Trigger: TTCCTTCAGACCAGTTTGCAAAAGGACAGGACACTG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTTTGGCTGTTTAACTTaGGGTTTCACGGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKFGCLT*GFTEGA
Trigger: AGCCCCTTCCGTGAAACCCAAAGTTAAACAGCCAAA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTTTGGCTGTTTAACTTaGGGTTTCACGGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSFGCLT*GFTEGA
Trigger: AGCCCCTTCCGTGAAACCCAAAGTTAAACAGCCAAA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAAAAAGTAGCTCATCATaGCTCTTCTCTAAGGCTTGC +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGKSSSS*LFSKAC
Trigger: GCAAGCCTTAGAGAAGAGCAATGATGAGCTACTTTT...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAATCGACAGCAAACTCTaGTGCAGATTTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTIDSKL*CRFGGC
Trigger: ACAACCACCAAATCTGCACAAGAGTTTGCTGTCGAT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCTGAGGTTGACATCTTaGCCTATGCTCTATGGATCA +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVLRLTS*PMLYGS
Trigger: TGATCCATAGAGCATAGGCAAAGATGTCAACCTCAG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS GCA 90 bp TGTGGCTGCAACACCTGTAACTCTTGCATTGGAAAACCATCTTCTTaGTTTGAAGATGGATACACATCTGAGTCAAGCTTTCTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: CGCNTCNSCIGKPSS*FEDGYTSESSFLSA
Trigger: TGCTGAAAGAAAGCTTGACTCAGATGTGTATCCATCTTCAAAGCAAGAAGATGGTTTTCCAATGCAAGAGTTACAGGTGTTGCAGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS GCA 90 bp GTTGATGACTCAAGAGATGCTTGTGGCTGCAACACCTGTAACTCTTaGATTGGAAAACCATCTTCTTGCTTTGAAGATGGATACACATCT +
Preference number: 5 (lower is better)
Translates to: VDDSRDACGCNTCNS*IGKPSSCFEDGYTS
Trigger: AGATGTGTATCCATCTTCAAAGCAAGAAGATGGTTTTCCAATGCAAGAGTTACAGGTGTTGCAGCCACAAGCATCTCTTGAGTCATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS GCA 90 bp TTTTCCAGAATATTTACTGCATATGAAGTAGAGTGGAGAGGTTCTTaGTTAACTGCACCCACAGTGGTTGAGGAAGTAGTAGCAGTACCA +
Preference number: 5 (lower is better)
Translates to: FSRIFTAYEVEWRGS*LTAPTVVEEVVAVP
Trigger: TGGTACTGCTACTACTTCCTCAACCACTGTGGGTGCAGTTAAGCAAGAACCTCTCCACTCTACTTCATATGCAGTAAATATTCTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGAGTGGAATCTCCAATaGGGCTACAGGATAAAGATG +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKEWNLQ*GYRIKM
Trigger: CATCTTTATCCTGTAGCCCAATTGGAGATTCCACTC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACGCTGTAGAATAAATTaGTGCTTGGCCCGATATTAC +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTRCRIN*CLARYY
Trigger: GTAATATCGGGCCAAGCACAAATTTATTCTACAGCG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCTGAAGACAGATCTCTaGTTTGAGCAGGGTAATTCT +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVLKTDL*FEQGNS
Trigger: AGAATTACCCTGCTCAAACAAGAGATCTGTCTTCAG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAACCTGCCTGCAGTATaGACTGCTGAAGAATTTGTA +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVNLPAV*TAEEFV
Trigger: TACAAATTCTTCAGCAGTCAATACTGCAGGCAGGTT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAATTTTGAGGATGGAGTaGCTGCTGAGAATGATCACC +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRILRME*LLRMIT
Trigger: GGTGATCATTCTCAGCAGCAACTCCATCCTCAAAAT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCATTTTGAGGATGGAGTaGCTGCTGAGAATGATCACC +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFILRME*LLRMIT
Trigger: GGTGATCATTCTCAGCAGCAACTCCATCCTCAAAAT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCATAACTTCAGAATTTaGAGGATGGAGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVHNFRI*RMELLL
Trigger: CAGCAGCAACTCCATCCTCAAAATTCTGAAGTTATG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGTTGTTGTAATGGTTTaGAAGACTCAGAGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVVVVMV*KTQRGP
Trigger: TGGACCTCTCTGAGTCTTCAAAACCATTACAACAAC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAGATCAAGAGTCATTTTaGACTGAAGGGCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEDQESF*TEGQVL
Trigger: CAGTACCTGCCCTTCAGTCAAAAATGACTCTTGATC...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAATTCTGGCGTTTGCCTaGGGCAGGTCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKILAFA*GRSFQL
Trigger: CAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAAT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAAATATCTGTTCCCCTaGGATTCTGGCGTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEKYLFP*DSGVCL
Trigger: AAGGCAAACGCCAGAATCCAAGGGGAACAGATATTT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACACAAGTTCAATGGGCTTaGAGGATTCTGAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTQVQWA*RILKSL
Trigger: TAAGCTCTTCAGAATCCTCAAAGCCCATTGAACTTG...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCCAAGTTCAATGGGCTTaGAGGATTCTGAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVQVQWA*RILKSL
Trigger: TAAGCTCTTCAGAATCCTCAAAGCCCATTGAACTTG...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAATCACGCTCTCTGTATaGGCCTTCTCCTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKITLSV*AFSSAF
Trigger: GAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGAT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATATCGACAGCAAACTCTaGTGCAGATTTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDIDSKL*CRFGGC
Trigger: ACAACCACCAAATCTGCACAAGAGTTTGCTGTCGAT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAACAGTATTTCTGGTTTaGTGGCCAGATGTGAGTACA +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTTVFLV*WPDVST
Trigger: TGTACTCACATCTGGCCACAAAACCAGAAATACTGT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCATGATGCTCCCACTGTaGATACTCTGCATCTCTCAT +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFMMLPL*ILCISH
Trigger: ATGAGAGATGCAGAGTATCAACAGTGGGAGCATCAT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAACTGAGGTTGACATCTTaGCCTATGCTCTATGGATCA +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSELRLTS*PMLYGS
Trigger: TGATCCATAGAGCATAGGCAAAGATGTCAACCTCAG...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAGGAGGAATTATACTTaGAGGTTTAGGGGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKRRNYT*RFRGLG
Trigger: ACCAAGACCCCTAAACCTCAAAGTATAATTCCTCCT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAGACAGATCTCTTGTTaGAGCAGGGTAATTCTCATT +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVRQISC*SRVILI
Trigger: AATGAGAATTACCCTGCTCAAACAAGAGATCTGTCT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTAGACAGATCTCTTGTTaGAGCAGGGTAATTCTCATT +
Preference number: 5 (lower is better)
Translates to: KGTKRRALQLPVLRVKEARQISC*SRVILI
Trigger: AATGAGAATTACCCTGCTCAAACAAGAGATCTGTCT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTTTCAGCATAAGACTTaGGGTCAGGGGAAGTTATGT +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSFQHKT*GQGKLC
Trigger: ACATAACTTCCCCTGACCCAAAGTCTTATGCTGAAA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCTTTCAGCATAAGACTTaGGGTCAGGGGAAGTTATGT +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFFQHKT*GQGKLC
Trigger: ACATAACTTCCCCTGACCCAAAGTCTTATGCTGAAA...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTAACCATCTTCTTGCTTaGAAGATGGATACACATCTG +
Preference number: 5 (lower is better)
Translates to: KGTKRRALQLPVLRVKEANHLLA*KMDTHL
Trigger: CAGATGTGTATCCATCTTCAAAGCAAGAAGATGGTT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCCTGTAACTCTTGCATaGGAAAACCATCTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFPVTLA*ENHLLA
Trigger: AGCAAGAAGATGGTTTTCCAATGCAAGAGTTACAGG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAGCAACCCCAATAACTaGATCTTCAAGACGGGAATT +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKSNPNN*IFKTGI
Trigger: AATTCCCGTCTTGAAGATCAAGTTATTGGGGTTGCT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAGCAACCCCAATAACTaGATCTTCAAGACGGGAATT +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRSNPNN*IFKTGI
Trigger: AATTCCCGTCTTGAAGATCAAGTTATTGGGGTTGCT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTAGCTGCATTATTGACTaGGCCAATTTGTTGGTTAAG +
Preference number: 5 (lower is better)
Translates to: KGTKRRALQLPVLRVKEASCIID*ANLLVK
Trigger: CTTAACCAACAAATTGGCCAAGTCAATAATGCAGCT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAGCTGCATTATTGACTaGGCCAATTTGTTGGTTAAG +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVSCIID*ANLLVK
Trigger: CTTAACCAACAAATTGGCCAAGTCAATAATGCAGCT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAAACCTGCCTGCAGTATaGACTGCTGAAGAATTTGTA +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSENLPAV*TAEEFV
Trigger: TACAAATTCTTCAGCAGTCAATACTGCAGGCAGGTT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCATAACTTCAGAATTTaGAGGATGGAGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFHNFRI*RMELLL
Trigger: CAGCAGCAACTCCATCCTCAAAATTCTGAAGTTATG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCTCTTCAGATTCAAGATaGGTAGCAGACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVSSDSR*VADCFL
Trigger: CAAGAAACAGTCTGCTACCAATCTTGAATCTGAAGA...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATGTCTTCCTCTTTAACTaGCCCTTTTCCTTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDVFLFN*PFSFSS
Trigger: AGAGCTAAAGGAAAAGGGCAAGTTAAAGAGGAAGAC...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGCAGTTTGAGGGCAACTGCAGTGCCAAAGGAAATGGGTTATTTTCTATGGGAGCAATAAATCCTGTTTaGACTTCTGGTTGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: KQFEGNCSAKGNGLFSMGAINPV*TSGCFS
Trigger: GGAAAAACAACCAGAAGTCAAAACAGGATTTATTGC...TCCCATAGAAAATAACCCATTTCCTTTGGCACTGCAGTTGCCCTCAAACTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGTGGAAAACTGCTGCTaGGGCCCGGATTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKVENCC*GPDFRK
Trigger: TTTTCTGAAATCCGGGCCCAAGCAGCAGTTTTCCAC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAGAGTGGAGAGGTTCTaGCTTAACTGCACCCACAGT +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKRVERF*LNCTHS
Trigger: ACTGTGGGTGCAGTTAAGCAAGAACCTCTCCACTCT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCACTACTTGGCTTAGCTaGAACAGTTCTGATAGTTTG +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVTTWLS*NSSDSL
Trigger: CAAACTATCAGAACTGTTCAAGCTAAGCCAAGTAGT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATCTCTAAGGCTTGCATaGTGTCAGGGTCCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKSLRLA*CQGPRQ
Trigger: TTGCCTTGGACCCTGACACAATGCAAGCCTTAGAGA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGAAAAAGTAGCTCATCATaGCTCTTCTCTAAGGCTTGC +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRKSSSS*LFSKAC
Trigger: GCAAGCCTTAGAGAAGAGCAATGATGAGCTACTTTT...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCACAGTATTTCTGGTTTaGTGGCCAGATGTGAGTACA +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFTVFLV*WPDVST
Trigger: TGTACTCACATCTGGCCACAAAACCAGAAATACTGT...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTCCCTACTCTGCACTTaGGAAACGAAAGACATCAAT +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSSLLCT*ETKDIN
Trigger: ATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGGA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATCCCTACTCTGCACTTaGGAAACGAAAGACATCAAT +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRSLLCT*ETKDIN
Trigger: ATTGATGTCTTTCGTTTCCAAAGTGCAGAGTAGGGA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCCTTAAGGAAACATCTTaGTTTGCCACGAGGCATATC +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFLKETS*FATRHI
Trigger: GATATGCCTCGTGGCAAACAAAGATGTTTCCTTAAG...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCGGCAGTATCATAGACTaGGCCTCCCATATTATGAAA +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSGSIID*ASHIMK
Trigger: TTTCATAATATGGGAGGCCAAGTCTATGATACTGCC...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGCACAATAGGGTCTCTTaGAGGCAGTATCATAGACTT +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKHNRVS*RQYHRL
Trigger: AAGTCTATGATACTGCCTCAAAGAGACCCTATTGTG...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGATACACAAATACCATaGTGTTACAACTGCCTACAG +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVDTQIP*CYNCLQ
Trigger: CTGTAGGCAGTTGTAACACAATGGTATTTGTGTATC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGCTCCAAAGTCATGGGTaGGGATATAGCTGCTTTAAA +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKLQSHG*GYSCFK
Trigger: TTTAAAGCAGCTATATCCCAACCCATGACTTTGGAG...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTCCAAAGTCATGGGTaGGGATATAGCTGCTTTAAA +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRLQSHG*GYSCFK
Trigger: TTTAAAGCAGCTATATCCCAACCCATGACTTTGGAG...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS GCA 90 bp TCCTGGACCTTGGACTCATGCACCTTAAGTATGAGAGGATGTTGCTaGTTTAAGTCTTTAGTATTCAACCTTATTTGTGGAGTCTGTATT +
Preference number: 5 (lower is better)
Translates to: SWTLDSCTLSMRGCC*FKSLVFNLICGVCI
Trigger: AATACAGACTCCACAAATAAGGTTGAATACTAAAGACTTAAAGCAGCAACATCCTCTCATACTTAAGGTGCATGAGTCCAAGGTCCAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCAACCATCTTCTTGCTTaGAAGATGGATACACATCTG +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSNHLLA*KMDTHL
Trigger: CAGATGTGTATCCATCTTCAAAGCAAGAAGATGGTT...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAAGGCACCAAAAGGAGAGCTCTACAACTTCCAGTTCTAAGAGTTAAGGAAGCTATCTGTCATCTGCCTTaGACACCTTATAAGTTGATT +
Preference number: 5 (lower is better)
Translates to: KGTKRRALQLPVLRVKEAICHLP*TPYKLI
Trigger: AATCAACTTATAAGGTGTCAAAGGCAGATGACAGAT...AGCTTCCTTAACTCTTAGAACTGGAAGTTGTAGAGCTCTCCTTTTGGTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAGGGTAGCTGCATTATaGACTTGGCCAATTTGTTGG +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKRVAAL*TWPICW
Trigger: CCAACAAATTGGCCAAGTCAATAATGCAGCTACCCT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGCCCTAAAGCATGATTaGGAATTTGAATCTGAGATG +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFALKHD*EFESEM
Trigger: CATCTCAGATTCAAATTCCAAATCATGCTTTAGGGC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGGCCCTAAAGCATGATTaGGAATTTGAATCTGAGATG +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKALKHD*EFESEM
Trigger: CATCTCAGATTCAAATTCCAAATCATGCTTTAGGGC...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTCTTCAGATTCAAGATaGGTAGCAGACTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSSSDSR*VADCFL
Trigger: CAAGAAACAGTCTGCTACCAATCTTGAATCTGAAGA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGCAGTACCAGTAGTATaGGCAGTTGGGCTAGTAGTT +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKAVPVV*AVGLVV
Trigger: AACTACTAGCCCAACTGCCAATACTACTGGTACTGC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACAGTGTCCTGTCCTTTaGCAAACTGGTCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKQCPVL*QTGLKE
Trigger: TTCCTTCAGACCAGTTTGCAAAAGGACAGGACACTG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGACTACTTGGCTTAGCTaGAACAGTTCTGATAGTTTG +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKTTWLS*NSSDSL
Trigger: CAAACTATCAGAACTGTTCAAGCTAAGCCAAGTAGT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATTTGGCTGTTTAACTTaGGGTTTCACGGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKFGCLT*GFTEGA
Trigger: AGCCCCTTCCGTGAAACCCAAAGTTAAACAGCCAAA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAAAGCAGTCAGAGAATaGCACCAATTCCACATCCAG +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKKAVRE*HQFHIQ
Trigger: CTGGATGTGGAATTGGTGCAATTCTCTGACTGCTTT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGTCTCAGCTAAACTACTaGAAACGCTACCTATCAAAC +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKSQLNY*KRYLSN
Trigger: GTTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGA...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCGACTGACACAGAAGCAGTTATCCTGGGATATTTCACTCTATATGAAAAGCTCTCAGCTAAACTACTaGAAACGCTACCTATCAAAC +
Preference number: 5 (lower is better)
Translates to: MRLTQKQLSWDISLYMKSSQLNY*KRYLSN
Trigger: GTTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGA...GCTTTTCATATAGAGTGAAATATCCCAGGATAACTGCTTCTGTGTCAGTCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACTGACACAAAACACAAGGTCATGTaGAACCTAATACATTCACTG +
Preference number: 5 (lower is better)
Translates to: PRVYTVHLCSYASNATDTKHKVM*NLIHSL
Trigger: CAGTGAATGTATTAGGTTCAACATGACCTTGTGTTT...TGTGTCAGTCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCAGTAACACTGCTTTCTaGATAGGATTTAAGGCACTA +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVSNTAF*IGFKAL
Trigger: TAGTGCCTTAAATCCTATCAAGAAAGCAGTGTTACT...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGATACACAAATACCATaGTGTTACAACTGCCTACAG +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFDTQIP*CYNCLQ
Trigger: CTGTAGGCAGTTGTAACACAATGGTATTTGTGTATC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp CAACGCATGACTGTATTTAACTTCATACAAAGCGATAACTCATGGACGGCTGTCGTATACACTGTTCATTaGTGCAGTTATGCGTCAAAT +
Preference number: 5 (lower is better)
Translates to: QRMTVFNFIQSDNSWTAVVYTVH*CSYASN
Trigger: ATTTGACGCATAACTGCACAAATGAACAGTGTATAC...GACAGCCGTCCATGAGTTATCGCTTTGTATGAAGTTAAATACAGTCATGCGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS CCA 90 bp CCTGTCCTTTTGCAAACTGGTCTGAAGGAAGACCATCAAGTTCAATaGGCTTTGAGGATTCTGAAGAGCTTATATTTTCCAGAATATTTA +
Preference number: 5 (lower is better)
Translates to: PVLLQTGLKEDHQVQ*ALRILKSLYFPEYL
Trigger: TAAATATTCTGGAAAATATAAGCTCTTCAGAATCCTCAAAGCCCATTGAACTTGATGGTCTTCCTTCAGACCAGTTTGCAAAAGGACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAGGAGGAATTATACTTaGAGGTTTAGGGGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKRRNYT*RFRGLG
Trigger: ACCAAGACCCCTAAACCTCAAAGTATAATTCCTCCT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACGCTGTAGAATAAATTaGTGCTTGGCCCGATATTAC +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKRCRIN*CLARYY
Trigger: GTAATATCGGGCCAAGCACAAATTTATTCTACAGCG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAATCTGTCATCTGCCTTaGACACCTTATAAGTTGATT +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEICHLP*TPYKLI
Trigger: AATCAACTTATAAGGTGTCAAAGGCAGATGACAGAT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp AAGTACACTAGGATGTTCGCACAACGGAATTGCCTAACAATGCATTTCTCAGAAATGATCACCATTGCTTaGAATAACATGACCTTCCAT +
Preference number: 5 (lower is better)
Translates to: KYTRMFAQRNCLTMHFSEMITIA*NNMTFH
Trigger: ATGGAAGGTCATGTTATTCAAAGCAATGGTGATCAT...TTCTGAGAAATGCATTGTTAGGCAATTCCGTTGTGCGAACATCCTAGTGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAGTCTTCCTCTTTAACTaGCCCTTTTCCTTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKVFLFN*PFSFSS
Trigger: AGAGCTAAAGGAAAAGGGCAAGTTAAAGAGGAAGAC...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAAATATCTGTTCCCCTaGGATTCTGGCGTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKKYLFP*DSGVCL
Trigger: AAGGCAAACGCCAGAATCCAAGGGGAACAGATATTT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGATTTTCCTCCACCTCTTaGATCTTCTGTCTCATTTTT +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRFSSTS*IFCLIF
Trigger: AAAAATGAGACAGAAGATCAAAGAGGTGGAGGAAAA...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAATCGACAGCAAACTCTaGTGCAGATTTGGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKIDSKL*CRFGGC
Trigger: ACAACCACCAAATCTGCACAAGAGTTTGCTGTCGAT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp CTTCCTACTCCTCTCCACTTGGAAAATTCATTTTATGATGCTCCCACTGTTGATAAACACAAGGTCATGTaGAACCTAATACATTCACTG +
Preference number: 5 (lower is better)
Translates to: LPTPLHLENSFYDAPTVDKHKVM*NLIHSL
Trigger: CAGTGAATGTATTAGGTTCAACATGACCTTGTGTTT...ATCAACAGTGGGAGCATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCGTGTCTTATTTGGGCATTGAGCAGTAACACTGCTTTCTTGATAGGATTTAAGAGTAACACTGCTTTCTaGATAGGATTTAAGGCACTA +
Preference number: 5 (lower is better)
Translates to: ACLIWALSSNTAFLIGFKSNTAF*IGFKAL
Trigger: TAGTGCCTTAAATCCTATCAAGAAAGCAGTGTTACT...CTTAAATCCTATCAAGAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACACGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAATGTCTTATTTGGGCATaGAGCAGTAACACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKCLIWA*SSNTAF
Trigger: GAAAGCAGTGTTACTGCTCAATGCCCAAATAAGACA...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp ATGCACAACCAAGAGTATACACTGTTCATTTGTGCAGTTATGCGTCAAATGCGACCTACTCCTCTCCACTaGGAAAATTCATTTTATGAT +
Preference number: 5 (lower is better)
Translates to: MHNQEYTLFICAVMRQMRPTPLH*ENSFYD
Trigger: ATCATAAAATGAATTTTCCAAGTGGAGAGGAGTAGG...TCGCATTTGACGCATAACTGCACAAATGAACAGTGTATACTCTTGGTTGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAACTTAAGGAAACATCTTaGTTTGCCACGAGGCATATC +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKLKETS*FATRHI
Trigger: GATATGCCTCGTGGCAAACAAAGATGTTTCCTTAAG...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAAAATACTTTCCTGGGTaGTGGCAACATGTGCTTTAC +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKKYFPG*WQHVLY
Trigger: GTAAAGCACATGTTGCCACAACCCAGGAAAGTATTT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp TGCCACGAGGCATATCATGAAGAAAATGTGGCTAGTGAATTCAAACATCGATTCGTATACACTGTTCATTaGTGCAGTTATGCGTCAAAT +
Preference number: 5 (lower is better)
Translates to: CHEAYHEENVASEFKHRFVYTVH*CSYASN
Trigger: ATTTGACGCATAACTGCACAAATGAACAGTGTATAC...GAATCGATGTTTGAATTCACTAGCCACATTTTCTTCATGATATGCCTCGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS CCA 90 bp TTTGTGCTTGGCCCGATATTACAGAACTCTGATTATGTAAAGGTTTaGAATAGCTTAGTGTTTGCACAGGAGGAATTATACTTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: FVLGPILQNSDYVKV*NSLVFAQEELYFEV
Trigger: AACCTCAAAGTATAATTCCTCCTGTGCAAACACTAAGCTATTCCAAACCTTTACATAATCAGAGTTCTGTAATATCGGGCCAAGCACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGTCTTCCTCTTTAACTaGCCCTTTTCCTTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKVFLFN*PFSFSS
Trigger: AGAGCTAAAGGAAAAGGGCAAGTTAAAGAGGAAGAC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAACAAGTTCAATGGGCTTaGAGGATTCTGAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKQVQWA*RILKSL
Trigger: TAAGCTCTTCAGAATCCTCAAAGCCCATTGAACTTG...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAAAAAGTAGCTCATCATaGCTCTTCTCTAAGGCTTGC +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKKSSSS*LFSKAC
Trigger: GCAAGCCTTAGAGAAGAGCAATGATGAGCTACTTTT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS CCA 90 bp AAATTAGTTGAGTTCTTAAGATCAAGGGTAGCTGCATTATTGACTTaGCCAATTTGTTGGTTAAGTTGTGTCACTGAACCAACAACACTT +
Preference number: 5 (lower is better)
Translates to: KLVEFLRSRVAALLT*PICWLSCVTEPTTL
Trigger: AAGTGTTGTTGGTTCAGTGACACAACTTAACCAACAAATTGGCCAAGTCAATAATGCAGCTACCCTTGATCTTAAGAACTCAACTAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS-3UTR CAA 90 bp GAACCTAATACATTCACTGTCTCAGCTAAACTACTTGAAACGCTACCTATCAAAATGATCACCATTGCTTaGAATAACATGACCTTCCAT +
Preference number: 5 (lower is better)
Translates to: EPNTFTVSAKLLETLPIKMITIA*NNMTFH
Trigger: ATGGAAGGTCATGTTATTCAAAGCAATGGTGATCAT...TTTGATAGGTAGCGTTTCAAGTAGTTTAGCTGAGACAGTGAATGTATTAGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAACTACTTGGCTTAGCTaGAACAGTTCTGATAGTTTG +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKTTWLS*NSSDSL
Trigger: CAAACTATCAGAACTGTTCAAGCTAAGCCAAGTAGT...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAATTTTCCTCCACCTCTTaGATCTTCTGTCTCATTTTT +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKFSSTS*IFCLIF
Trigger: AAAAATGAGACAGAAGATCAAAGAGGTGGAGGAAAA...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS-3UTR CAA 90 bp GCAATAAAACATCATTTATTATGGCGATGTAAAGCAAGCACCAACAGCTTCAAAGCAATAAATCCTGTTTaGACTTCTGGTTGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: AIKHHLLWRCKASTNSFKAINPV*TSGCFS
Trigger: GGAAAAACAACCAGAAGTCAAAACAGGATTTATTGC...TTTGAAGCTGTTGGTGCTTGCTTTACATCGCCATAATAAATGATGTTTTATTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524678.1
CDS CCA 72 bp ACATGGCCCCGGCGAGCAGGCGGGAGAAGGGCGCGCTaGCGAGTCTGGGCCGCAAAGACCCGGGCCGCGGCG +
Preference number: 6 (lower is better)
Translates to: TWPRRAGGRRAR*RVWAAKTRAAA
Trigger: CGCCGCGGCCCGGGTCTTTGCGGCCCAGACTCGCCAGCGCGCCCTTCTCCCGCCTGCTCGCCGGGGCCATGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650167.2
CDS CCA 72 bp TGGTGGGGGACAAAATGTACGAACCATCTGGGTCCCTaGCCGTCTAGTCCTGTTAGGCATTCGTACAGCAAG +
Preference number: 6 (lower is better)
Translates to: WWGTKCTNHLGP*PSSPVRHSYSK
Trigger: CTTGCTGTACGAATGCCTAACAGGACTAGACGGCCAGGGACCCAGATGGTTCGTACATTTTGTCCCCCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CCA 72 bp TTGGGAAGTGGTGGGGGACAAAATGTACGAACCATCTaGGTCCCTGGCCGTCTAGTCCTGTTAGGCATTCGT +
Preference number: 6 (lower is better)
Translates to: LGSGGGQNVRTI*VPGRLVLLGIR
Trigger: ACGAATGCCTAACAGGACTAGACGGCCAGGGACCCAGATGGTTCGTACATTTTGTCCCCCACCACTTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS GCA 72 bp CTGAGACCTGGGAGGTCTTCTGTTGTAATCCTCCGTTaGTCACCTGAGTGGAATCTCCAATTGGGCTACAGG +
Preference number: 6 (lower is better)
Translates to: LRPGRSSVVILR*SPEWNLQLGYR
Trigger: CCTGTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGGATTACAACAGAAGACCTCCCAGGTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS CCA 72 bp GCTGAAGGTGGTGGGATGCTGATAAGCAGAGAGAGATaGTGGAAGTGTTCCAGTGCTTGGCAAAGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: AEGGGMLISRER*WKCSSAWQRSS
Trigger: ACTGGACCTTTGCCAAGCACTGGAACACTTCCACCATCTCTCTCTGCTTATCAGCATCCCACCACCTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000527250.5
ENST00000527788.5
ENST00000650167.2
CDS CCA 72 bp TCTTCTTCAATCTTGACACTGACTGCATCCCCAGATTaGGCCATGGCCAACAGTGCAAGTGCACTCCTAGCT +
Preference number: 6 (lower is better)
Translates to: SSSILTLTASPD*AMANSASALLA
Trigger: AGCTAGGAGTGCACTTGCACTGTTGGCCATGGCCCAATCTGGGGATGCAGTCAGTGTCAAGATTGAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CAA 90 bp ATCTTGGTTTTCTTCTTCAATCTTGACACTGACTGCATCCCCAGATaGGGCCATGGCCAACAGTGCAAGTGCACTCCTAGCTGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: ILVFFFNLDTDCIPR*GHGQQCKCTPSWVH
Trigger: ATGAACCCAGCTAGGAGTGCACTTGCACTGTTGGCCATGGCCCAATCTGGGGATGCAGTCAGTGTCAAGATTGAAGAAGAAAACCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS TCA 72 bp GTGGAGAGGTTCTTGCTTAACTGCACCCACAGTGGTTaGGGAAGTAGTAGCAGTACCAGTAGTATTGGCAGT +
Preference number: 6 (lower is better)
Translates to: VERFLLNCTHSG*GSSSSTSSIGS
Trigger: ACTGCCAATACTACTGGTACTGCTACTACTTCCTCAACCACTGTGGGTGCAGTTAAGCAAGAACCTCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS GCA 72 bp CTTGAGCTGAGCGGTATGTTGAAGACTGAGGTGGTATaGTGTTACTTAATACAGAACTGCCCAGGCGCTCAA +
Preference number: 6 (lower is better)
Translates to: LELSGMLKTEVV*CYLIQNCPGAQ
Trigger: TTGAGCGCCTGGGCAGTTCTGTATTAAGTAACAGCATACCACCTCAGTCTTCAACATACCGCTCAGCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS GCA 72 bp ACCTTGATCTTGGACTTCCCAGCCTCTAGAATATTCTaGTGCTCTGATCTTCTGGTGCTGCTAACTGAGACG +
Preference number: 6 (lower is better)
Translates to: TLILDFPASRIF*CSDLLVLLTET
Trigger: CGTCTCAGTTAGCAGCACCAGAAGATCAGAGCAGCAGAATATTCTAGAGGCTGGGAAGTCCAAGATCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS CAA 72 bp ATTGGTAGCAGACTGTTTCTTGAATGGGCCAGAACTTaGCTCCTGGACTTCATGACTTGGTCCAACCACTGC +
Preference number: 6 (lower is better)
Translates to: IGSRLFLEWART*LLDFMTWSNHC
Trigger: GCAGTGGTTGGACCAAGTCATGAAGTCCAGGAGCAAAGTTCTGGCCCATTCAAGAAACAGTCTGCTACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CAA 90 bp CAGCAAGAAGGCTCTCAACAGTCACCAGATACAGGTACCTTGATCTaGGACTTCCCAGCCTCTAGAATATTCTGCTGCTCTGATCTTCTG +
Preference number: 6 (lower is better)
Translates to: QQEGSQQSPDTGTLI*DFPASRIFCCSDLL
Trigger: CAGAAGATCAGAGCAGCAGAATATTCTAGAGGCTGGGAAGTCCAAGATCAAGGTACCTGTATCTGGTGACTGTTGAGAGCCTTCTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS CAA 90 bp AAGGCACAGCAAGAAGGCTCTCAACAGTCACCAGATACAGGTACCTaGATCTTGGACTTCCCAGCCTCTAGAATATTCTGCTGCTCTGAT +
Preference number: 6 (lower is better)
Translates to: KAQQEGSQQSPDTGT*ILDFPASRIFCCSD
Trigger: ATCAGAGCAGCAGAATATTCTAGAGGCTGGGAAGTCCAAGATCAAGGTACCTGTATCTGGTGACTGTTGAGAGCCTTCTTGCTGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS TCA 72 bp TGGGAGGTCTTCTGTTGTAATCCTCCGTTGCTCACCTaGGTGGAATCTCCAATTGGGCTACAGGATAAAGAT +
Preference number: 6 (lower is better)
Translates to: WEVFCCNPPLLT*VESPIGLQDKD
Trigger: ATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGGATTACAACAGAAGACCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS GCA 72 bp AAGACTGAGGTGGTATGCTGTTACTTAATACAGAACTaGCCAGGCGCTCAAATGCCAAAGCAGTTGGAACAG +
Preference number: 6 (lower is better)
Translates to: KTEVVCCYLIQN*PGAQMPKQLEQ
Trigger: CTGTTCCAACTGCTTTGGCATTTGAGCGCCTGGGCAGTTCTGTATTAAGTAACAGCATACCACCTCAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS GCA 72 bp TTGATCTTGGACTTCCCAGCCTCTAGAATATTCTGCTaGTCTGATCTTCTGGTGCTGCTAACTGAGACGCTT +
Preference number: 6 (lower is better)
Translates to: LILDFPASRIFC*SDLLVLLTETL
Trigger: AAGCGTCTCAGTTAGCAGCACCAGAAGATCAGAGCAGCAGAATATTCTAGAGGCTGGGAAGTCCAAGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS CAA 72 bp GTAATCCTCCGTTGCTCACCTGAGTGGAATCTCCAATaGGGCTACAGGATAAAGATGACTGCCTGGTTGTTT +
Preference number: 6 (lower is better)
Translates to: VILRCSPEWNLQ*GYRIKMTAWLF
Trigger: AAACAACCAGGCAGTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGGATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS CAA 90 bp TTTCTGAGGAAGGAGGAGTATACGGTAAGTAAATATCTGTTCCCCTaGGATTCTGGCGTTTGCCTTGGGCAGGTCTTTTCAGCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: FLRKEEYTVSKYLFP*DSGVCLGQVFSAVS
Trigger: AGAAACAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAACAGATATTTACTTACCGTATACTCCTCCTTCCTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS TCA 72 bp AATTGTGGTAAGAGAGTAGTTCCTGAAGCAGCAGCCTaGGCAGTTCGGGATTCAGCAGTAGACAGAAAATTC +
Preference number: 6 (lower is better)
Translates to: NCGKRVVPEAAA*AVRDSAVDRKF
Trigger: GAATTTTCTGTCTACTGCTGAATCCCGAACTGCTCAGGCTGCTGCTTCAGGAACTACTCTCTTACCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000528155.1
ENST00000650167.2
CDS TCA 72 bp AGGTTTCCTTCATTGCTCTTGTGTTCAAAAAGCGAGTaGCAAAGGGAGCGGGAGGTTCAAATTCCTCATCGT +
Preference number: 6 (lower is better)
Translates to: RFPSLLLCSKSE*QREREVQIPHR
Trigger: ACGATGAGGAATTTGAACCTCCCGCTCCCTTTGTCACTCGCTTTTTGAACACAAGAGCAATGAAGGAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS TCA 72 bp AAGAAGGCTCTCAACAGTCACCAGATACAGGTACCTTaGTCTTGGACTTCCCAGCCTCTAGAATATTCTGCT +
Preference number: 6 (lower is better)
Translates to: KKALNSHQIQVP*SWTSQPLEYSA
Trigger: AGCAGAATATTCTAGAGGCTGGGAAGTCCAAGATCAAGGTACCTGTATCTGGTGACTGTTGAGAGCCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS GCA 72 bp AGCCTTTGGGTTGATGACTCAAGAGATGCTTGTGGCTaGAACACCTGTAACTCTTGCATTGGAAAACCATCT +
Preference number: 6 (lower is better)
Translates to: SLWVDDSRDACG*NTCNSCIGKPS
Trigger: AGATGGTTTTCCAATGCAAGAGTTACAGGTGTTGCAGCCACAAGCATCTCTTGAGTCATCAACCCAAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CCA 72 bp AGGTCTTCTGTTGTAATCCTCCGTTGCTCACCTGAGTaGAATCTCCAATTGGGCTACAGGATAAAGATGACT +
Preference number: 6 (lower is better)
Translates to: RSSVVILRCSPE*NLQLGYRIKMT
Trigger: AGTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGGTGAGCAACGGAGGATTACAACAGAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS CCA 72 bp TCTATCTTTACCACAAATTCATCACGCTCTCTGTATTaGCCTTCTCCTCCGCTTTCTGTGTCCTCCTCATCT +
Preference number: 6 (lower is better)
Translates to: SIFTTNSSRSLY*PSPPLSVSSSS
Trigger: AGATGAGGAGGACACAGAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGATGAATTTGTGGTAAAGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CCA 72 bp TTTCCGTTTCTTTGGTGGTGGCTCAGCCTTTACTTTTaGCTGTTTAACTTTGGGTTTCACGGAAGGGGCTTT +
Preference number: 6 (lower is better)
Translates to: FPFLWWWLSLYF*LFNFGFHGRGF
Trigger: AAAGCCCCTTCCGTGAAACCCAAAGTTAAACAGCCAAAAGTAAAGGCTGAGCCACCACCAAAGAAACGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000528034.1
ENST00000650167.2
CDS CAA 72 bp AAGGAGGAGTATACGGTAAGTAAATATCTGTTCCCCTaGGATTCTGGCGTTTGCCTTGGGCAGGTCTTTTCA +
Preference number: 6 (lower is better)
Translates to: KEEYTVSKYLFP*DSGVCLGQVFS
Trigger: TGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAACAGATATTTACTTACCGTATACTCCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CAA 72 bp TTCTATCTTTACCACAAATTCATCACGCTCTCTGTATaGGCCTTCTCCTCCGCTTTCTGTGTCCTCCTCATC +
Preference number: 6 (lower is better)
Translates to: FYLYHKFITLSV*AFSSAFCVLLI
Trigger: GATGAGGAGGACACAGAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGATGAATTTGTGGTAAAGATAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CAA 90 bp CTCTATGTCTTCTATCTTTACCACAAATTCATCACGCTCTCTGTATaGGCCTTCTCCTCCGCTTTCTGTGTCCTCCTCATCTGTAAAACC +
Preference number: 6 (lower is better)
Translates to: LYVFYLYHKFITLSV*AFSSAFCVLLICKT
Trigger: GGTTTTACAGATGAGGAGGACACAGAAAGCGGAGGAGAAGGCCAATACAGAGAGCGTGATGAATTTGTGGTAAAGATAGAAGACATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS GCA 72 bp GTAAGTAAATATCTGTTCCCCTTGGATTCTGGCGTTTaGCTTGGGCAGGTCTTTTCAGCTGTTTCTGATTAC +
Preference number: 6 (lower is better)
Translates to: VSKYLFPLDSGV*LGQVFSAVSDY
Trigger: GTAATCAGAAACAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAACAGATATTTACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS GCA 72 bp CTTTTGCCATGTAAAGGCACATTGTTCATATCACCTTaGCCTCCACCTTCTTTCATTCTAAGGCACAGCAAG +
Preference number: 6 (lower is better)
Translates to: LLPCKGTLFISP*PPPSFILRHSK
Trigger: CTTGCTGTGCCTTAGAATGAAAGAAGGTGGAGGGCAAGGTGATATGAACAATGTGCCTTTACATGGCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527788.5
CDS CCA 72 bp ATGCATAGAAATATAATTCTGGGTCGGGCTAGAGTCTaGCAAATTCTGAGCCCGAGAGGCAGAAGAATAAGA +
Preference number: 6 (lower is better)
Translates to: MHRNIILGRARV*QILSPRGRRIR
Trigger: TCTTATTCTTCTGCCTCTCGGGCTCAGAATTTGCCAGACTCTAGCCCGACCCAGAATTATATTTCTATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS CAA 72 bp AGGATGGAGTTGCTGCTGAGAATGATCACCATTGCTTaGAATAACATGACCTTCCATCTGAAGGAAGGGATG +
Preference number: 6 (lower is better)
Translates to: RMELLLRMITIA*NNMTFHLKEGM
Trigger: CATCCCTTCCTTCAGATGGAAGGTCATGTTATTCAAAGCAATGGTGATCATTCTCAGCAGCAACTCCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CAA 72 bp CAGGTGTTTCAATGTGCTGTTGATCAAGAGTCATTTTaGACTGAAGGGCAGGTACTGGTGAAAGGTTCACAG +
Preference number: 6 (lower is better)
Translates to: QVFQCAVDQESF*TEGQVLVKGSQ
Trigger: CTGTGAACCTTTCACCAGTACCTGCCCTTCAGTCAAAAATGACTCTTGATCAACAGCACATTGAAACACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CAA 72 bp GTAAATATCTGTTCCCCTTGGATTCTGGCGTTTGCCTaGGGCAGGTCTTTTCAGCTGTTTCTGATTACTGTT +
Preference number: 6 (lower is better)
Translates to: VNICSPWILAFA*GRSFQLFLITV
Trigger: AACAGTAATCAGAAACAGCTGAAAAGACCTGCCCAAGGCAAACGCCAGAATCCAAGGGGAACAGATATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CAA 72 bp TTAGGCATTCGTACAGCAAGAGTGGAAAACTGCTGCTaGGGCCCGGATTTCAGAAAATCTAAGAAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: LGIRTARVENCC*GPDFRKSKKEA
Trigger: TGCTTCTTTCTTAGATTTTCTGAAATCCGGGCCCAAGCAGCAGTTTTCCACTCTTGCTGTACGAATGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CAA 90 bp AATGTACTATCAACAGGAGCTTCACTGTCTTCTTCAGATTCAAGATaGGTAGCAGACTGTTTCTTGAATGGGCCAGAACTTTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: NVLSTGASLSSSDSR*VADCFLNGPELCSW
Trigger: CCAGGAGCAAAGTTCTGGCCCATTCAAGAAACAGTCTGCTACCAATCTTGAATCTGAAGAAGACAGTGAAGCTCCTGTTGATAGTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CAA 90 bp CTAGTCCTGTTAGGCATTCGTACAGCAAGAGTGGAAAACTGCTGCTaGGGCCCGGATTTCAGAAAATCTAAGAAAGAAGCAATAAATCCT +
Preference number: 6 (lower is better)
Translates to: LVLLGIRTARVENCC*GPDFRKSKKEAINP
Trigger: AGGATTTATTGCTTCTTTCTTAGATTTTCTGAAATCCGGGCCCAAGCAGCAGTTTTCCACTCTTGCTGTACGAATGCCTAACAGGACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CCA 72 bp GGAGGTTCAAATTCCTCATCGTCACTACTACTAGTATaGATCTCAGGAGATGAGTCAGATTGGGATGATGAA +
Preference number: 6 (lower is better)
Translates to: GGSNSSSSLLLV*ISGDESDWDDE
Trigger: TTCATCATCCCAATCTGACTCATCTCCTGAGATCCATACTAGTAGTAGTGACGATGAGGAATTTGAACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CAA 72 bp TCAACAGGAGCTTCACTGTCTTCTTCAGATTCAAGATaGGTAGCAGACTGTTTCTTGAATGGGCCAGAACTT +
Preference number: 6 (lower is better)
Translates to: STGASLSSSDSR*VADCFLNGPEL
Trigger: AAGTTCTGGCCCATTCAAGAAACAGTCTGCTACCAATCTTGAATCTGAAGAAGACAGTGAAGCTCCTGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS TCA 72 bp TGGCAATTTCTCAACCTTGCTGGACCTATAAACCTGTaGATGAACAATAGATGGCACATTATGTGGCTGTAC +
Preference number: 6 (lower is better)
Translates to: WQFLNLAGPINL*MNNRWHIMWLY
Trigger: GTACAGCCACATAATGTGCCATCTATTGTTCATTCACAGGTTTATAGGTCCAGCAAGGTTGAGAAATTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS GCA 72 bp ATATTTACTGCATATGAAGTAGAGTGGAGAGGTTCTTaGTTAACTGCACCCACAGTGGTTGAGGAAGTAGTA +
Preference number: 6 (lower is better)
Translates to: IFTAYEVEWRGS*LTAPTVVEEVV
Trigger: TACTACTTCCTCAACCACTGTGGGTGCAGTTAAGCAAGAACCTCTCCACTCTACTTCATATGCAGTAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CCA 72 bp AAAAGTAGCTCATCCTCATCGTCACTACTACTAGTATaGATCTCAGGAGATGAGTCAGATTGGGATGATGAA +
Preference number: 6 (lower is better)
Translates to: KSSSSSSSLLLV*ISGDESDWDDE
Trigger: TTCATCATCCCAATCTGACTCATCTCCTGAGATCCATACTAGTAGTAGTGACGATGAGGATGAGCTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528034.1
CDS CAA 72 bp TCTTCAACAGCCTGCATGGTTTCATTTGAAGTTGACTaGGAAAAATCAGTAGGTGTAACTCCACAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SSTACMVSFEVD*EKSVGVTPQAA
Trigger: AGCAGCTTGTGGAGTTACACCTACTGATTTTTCCAAGTCAACTTCAAATGAAACCATGCAGGCTGTTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CAA 90 bp AGAATTTTGAGGATGGAGTTGCTGCTGAGAATGATCACCATTGCTTaGAATAACATGACCTTCCATCTGAAGGAAGGGATGTACTATTTG +
Preference number: 6 (lower is better)
Translates to: RILRMELLLRMITIA*NNMTFHLKEGMYYL
Trigger: CAAATAGTACATCCCTTCCTTCAGATGGAAGGTCATGTTATTCAAAGCAATGGTGATCATTCTCAGCAGCAACTCCATCCTCAAAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CAA 90 bp CTCAGAGAGGTCCATTTTCATAACTTCAGAATTTTGAGGATGGAGTaGCTGCTGAGAATGATCACCATTGCTTTGAATAACATGACCTTC +
Preference number: 6 (lower is better)
Translates to: LREVHFHNFRILRME*LLRMITIALNNMTF
Trigger: GAAGGTCATGTTATTCAAAGCAATGGTGATCATTCTCAGCAGCAACTCCATCCTCAAAATTCTGAAGTTATGAAAATGGACCTCTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS TCA 72 bp ACAGAAGAAAAAGTAATATCCTGGACAACAGAGAGGTaGATTCATTGTACAGGCTCTACTTCTGGCTTACAG +
Preference number: 6 (lower is better)
Translates to: TEEKVISWTTER*IHCTGSTSGLQ
Trigger: CTGTAAGCCAGAAGTAGAGCCTGTACAATGAATTCACCTCTCTGTTGTCCAGGATATTACTTTTTCTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528155.1
CDS CCA 72 bp GAGTTCTTAAGATCAAGGGTAGCTGCATTATTGACTTaGCCAATTTGTTGGTTAAGTTGTGTCACTGAACCA +
Preference number: 6 (lower is better)
Translates to: EFLRSRVAALLT*PICWLSCVTEP
Trigger: TGGTTCAGTGACACAACTTAACCAACAAATTGGCCAAGTCAATAATGCAGCTACCCTTGATCTTAAGAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CAA 72 bp AAGATGCCTTTACTTGACCTAAACCTGCCTGCAGTATaGACTGCTGAAGAATTTGTAAATCACAGGCAGAAT +
Preference number: 6 (lower is better)
Translates to: KMPLLDLNLPAV*TAEEFVNHRQN
Trigger: ATTCTGCCTGTGATTTACAAATTCTTCAGCAGTCAATACTGCAGGCAGGTTTAGGTCAAGTAAAGGCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS GCA 72 bp AACACCTGTAACTCTTGCATTGGAAAACCATCTTCTTaGTTTGAAGATGGATACACATCTGAGTCAAGCTTT +
Preference number: 6 (lower is better)
Translates to: NTCNSCIGKPSS*FEDGYTSESSF
Trigger: AAAGCTTGACTCAGATGTGTATCCATCTTCAAAGCAAGAAGATGGTTTTCCAATGCAAGAGTTACAGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CCA 72 bp GGCCCGATATTACAGAACTCTGATTATGTAAAGGTTTaGAATAGCTTAGTGTTTGCACAGGAGGAATTATAC +
Preference number: 6 (lower is better)
Translates to: GPILQNSDYVKV*NSLVFAQEELY
Trigger: GTATAATTCCTCCTGTGCAAACACTAAGCTATTCCAAACCTTTACATAATCAGAGTTCTGTAATATCGGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399302.7
ENST00000650167.2
CDS CAA 72 bp ACTGGTCTGAAGGAAGACCATCAAGTTCAATGGGCTTaGAGGATTCTGAAGAGCTTATATTTTCCAGAATAT +
Preference number: 6 (lower is better)
Translates to: TGLKEDHQVQWA*RILKSLYFPEY
Trigger: ATATTCTGGAAAATATAAGCTCTTCAGAATCCTCAAAGCCCATTGAACTTGATGGTCTTCCTTCAGACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399302.7
ENST00000524678.1
ENST00000527788.5
ENST00000650167.2
CDS CAA 90 bp AAGATGGATACACATCTGAGTCAAGCTTTCTTTCAGCATAAGACTTaGGGTCAGGGGAAGTTATGTTATTTTGTAATGTCTGACAATGAG +
Preference number: 6 (lower is better)
Translates to: KMDTHLSQAFFQHKT*GQGKLCYFVMSDNE
Trigger: CTCATTGTCAGACATTACAAAATAACATAACTTCCCCTGACCCAAAGTCTTATGCTGAAAGAAAGCTTGACTCAGATGTGTATCCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS GCA 72 bp TTGGACTCATGCACCTTAAGTATGAGAGGATGTTGCTaGTTTAAGTCTTTAGTATTCAACCTTATTTGTGGA +
Preference number: 6 (lower is better)
Translates to: LDSCTLSMRGCC*FKSLVFNLICG
Trigger: TCCACAAATAAGGTTGAATACTAAAGACTTAAAGCAGCAACATCCTCTCATACTTAAGGTGCATGAGTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2
CDS CAA 72 bp ACACATCTGAGTCAAGCTTTCTTTCAGCATAAGACTTaGGGTCAGGGGAAGTTATGTTATTTTGTAATGTCT +
Preference number: 6 (lower is better)
Translates to: THLSQAFFQHKT*GQGKLCYFVMS
Trigger: AGACATTACAAAATAACATAACTTCCCCTGACCCAAAGTCTTATGCTGAAAGAAAGCTTGACTCAGATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399302.7
ENST00000527788.5
ENST00000650167.2