RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for QPCTL (Homo sapiens)

Ensembl gene IDs: ENSG00000011478

Ensembl transcript IDs: ENST00000012049.10, ENST00000366382.8, ENST00000591606.1, ENST00000677024.1, ENST00000677542.1, ENST00000678102.1, ENST00000678862.1

Found 591 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGGGCTGCCCGGGGTTCGCACAACCAGCAGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCA +
Preference number: 1 (lower is better)
Translates to: PGCPGFAQPAGGADK*SRDAVDPVVPPPSA
Trigger: TGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCCTGCTGGTTGTGCGAACCCCGGGCAGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CCA 90 bp TCGCACAACCAGCAGGGGGCGCAGATAAGTGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAG +
Preference number: 1 (lower is better)
Translates to: SHNQQGAQISAPETL*IQLSHHPPQPGFGE
Trigger: CTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCCTGCTGGTTGTGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CCA 90 bp AGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTaGCCTCCAGGAACTAGCGGCAAGAGAGAGGTGGGAGGGTGGACG +
Preference number: 1 (lower is better)
Translates to: RDPAPRANLLSGTAA*PPGTSGKREVGGWT
Trigger: CGTCCACCCTCCCACCTCTCTCTTGCCGCTAGTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
3UTR CCA 90 bp CTTGGGCCAGCTCCAGCAGCAGGGCACAGGGCACAGCCGAATCCGTaGCCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGT +
Preference number: 1 (lower is better)
Translates to: LGPAPAAGHRAQPNP*PLQRGSIRVGRASS
Trigger: ACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCTGGAGCTGGCCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR TCA 90 bp CAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGGAAGGGCG +
Preference number: 1 (lower is better)
Translates to: QRECGTSCVPWVGGD*PRCPQGCARQQGRA
Trigger: CGCCCTTCCCTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR TCA 90 bp CCACCACATTGCCAAAGTCCACTGGCCCCAGGGGTGTTGAGGCTGTaGAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCA +
Preference number: 1 (lower is better)
Translates to: PPHCQSPLAPGVLRL*RDPAPRANLLSGTA
Trigger: TGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCAGTGGACTTTGGCAATGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR GCA 90 bp GCAGACGCTTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTaGGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGA +
Preference number: 1 (lower is better)
Translates to: ADASQCSSADGTSGP*EGSGCRRWDWGLPG
Trigger: TCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CCA 90 bp GGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTaGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTGAGGTGACG +
Preference number: 1 (lower is better)
Translates to: GHSRIRGPYKGGRSG*EELRVIMAGKGEVT
Trigger: CGTCACCTCACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR TCA 90 bp CAGTGTGGCCACCACATTGCCAAAGTCCACTGGCCCCAGGGGTGTTaGGGCTGTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAG +
Preference number: 1 (lower is better)
Translates to: QCGHHIAKVHWPQGC*GCEGIQLHVPTCCQ
Trigger: CTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCAGTGGACTTTGGCAATGTGGTGGCCACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR TCA 90 bp TCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTaGGGTGACGGGCAGCCCTTGGGTCCAGTGTGGCCACCACATTGC +
Preference number: 1 (lower is better)
Translates to: SIRVGRASSHNGRQG*GDGQPLGPVWPPHC
Trigger: GCAATGTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CCA 90 bp CAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATTGGCCAAGC +
Preference number: 1 (lower is better)
Translates to: QHTLGRSCLSFTGPR*DLLSHSPLHSHWPS
Trigger: GCTTGGCCAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 90 bp CTTCGAGTCATAATGGCAGGCAAGGGTGAGGTGACGGGCAGCCCTTaGGTCCAGTGTGGCCACCACATTGCCAAAGTCCACTGGCCCCAG +
Preference number: 1 (lower is better)
Translates to: LRVIMAGKGEVTGSP*VQCGHHIAKVHWPQ
Trigger: CTGGGGCCAGTGGACTTTGGCAATGTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTGCCATTATGACTCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CCA 90 bp AGGAACACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTaGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGG +
Preference number: 1 (lower is better)
Translates to: RNTARMRHKLCTVGG*RLTSVSAGVCQTAG
Trigger: CCCTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 90 bp AGCCAGGAACACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTaGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGC +
Preference number: 1 (lower is better)
Translates to: SQEHSENAAQVVYRG*VEIDLGVRRGVPDS
Trigger: GCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 90 bp GGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATTaGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGC +
Preference number: 1 (lower is better)
Translates to: GPRWDLLSHSPLHSH*PSTLEPQVFSQEHS
Trigger: GCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 90 bp AAGGACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCA +
Preference number: 1 (lower is better)
Translates to: KDKPAHPRQILPELH*PPLGPSLSQSSPQS
Trigger: TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR TCA 90 bp GAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATaGGACTGCAGCAGGTTCAAACGGTGCAGACGCTTCTCAATGCTC +
Preference number: 1 (lower is better)
Translates to: EPKGSPGWKYITSWG*DCSRFKRCRRFSML
Trigger: GAGCATTGAGAAGCGTCTGCACCGTTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR GCA 90 bp GACAAAGGTATGAAAAGGACAAACCAGCACACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGT +
Preference number: 1 (lower is better)
Translates to: DKGMKRTNQHTLGRS*LSFTGPRWDLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 90 bp GGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGG +
Preference number: 1 (lower is better)
Translates to: GPSVYLWGGSKFLFL*LSSHSGLFPVLEGW
Trigger: CCACCCTTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 90 bp AACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGT +
Preference number: 1 (lower is better)
Translates to: NSIWSLQTFGPSVYL*GGSKFLFLWLSSHS
Trigger: ACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CAA 90 bp CAGCAGGGGGCGCAGATAAGTGCTCCAGAGACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGAT +
Preference number: 2 (lower is better)
Translates to: QQGAQISAPETLWIQ*SHHPPQPGFGEASD
Trigger: ATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp AGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: RRCGSSCPTTLRSRASGRKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...CCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR TCA 90 bp CACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAGGGGTGTTGAGGCTGTaGAGGGATCCAGCTCCACGT +
Preference number: 2 (lower is better)
Translates to: HRAQPNPWPLQRGSIRVGGVLRL*RDPAPR
Trigger: ACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCC...TCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp CACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGACCAGGAGGCGGAGTTTaGAGTGAGCCGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: HRAQPNPWPLQRGSIRVGPGGGV*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAAACTCCGCCTCCTGG...TCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp GTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VKGSSSTCQPAVRDRSVASKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp ACCGTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 2 (lower is better)
Translates to: TVGGWRLTSVSAGVCQTAGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...TGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR TCA 90 bp GTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 2 (lower is better)
Translates to: VPGTVKGVLGSPLLQRLFVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...GAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR TCA 90 bp ACCGTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGGGTGTTGAGGCTGTaGAGGGATCCAGCTCCACGT +
Preference number: 2 (lower is better)
Translates to: TVGGWRLTSVSAGVCQTAGVLRL*RDPAPR
Trigger: ACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCC...TGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR TCA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGCAGGCAAGGGTGAGGTaGCGGGCAGCCCTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQQARVR*RAALGS
Trigger: GGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTG...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp GGTGGACGGGGACTTTCTGACTTGGAGATTTCCCGGGCTGCCCGGGGTTCGCACACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: GGRGLSDLEISRAARGSHTLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...GTGCGAACCCCGGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCCGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678102.1
3UTR-3UTR CCA 90 bp AAGGGCGTGGAGATGAGATGGAGCACGGGTACCCCTCTGCGGAGGAAGGGGATGCTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCT +
Preference number: 2 (lower is better)
Translates to: KGVEMRWSTGTPLRRKGMLPELH*PPLGPS
Trigger: AGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG...CATCCCCTTCCTCCGCAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGGCTCCCCGGGAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: SAEEGDVVVFHRAKGLPGKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...CCCGGGGAGCCCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTGTGACGGGCAGCCCTTaGGTCCAGTGTGGCCACCAC +
Preference number: 2 (lower is better)
Translates to: LSFTGPRWDLLSHSPLHSVTGSP*VQCGHH
Trigger: GTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCAC...ACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAGCACAGCCGAATCCGTaGCCCCTACAAAGGGGGTCG +
Preference number: 2 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPAQPNP*PLQRGS
Trigger: CGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGC...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR CAA 90 bp ACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATaGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: TARMRHKLCTVGGWR*TSVSAGVCQTAGKG
Trigger: GCCCTTCCCTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR TCA 90 bp CGGGTACCCCTCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGGGCAGGAGAATGGCGTaGACCCAGGAGGCGGAGTTT +
Preference number: 2 (lower is better)
Translates to: RVPLCGGRGCGRLPQSQRGRRMA*TQEAEF
Trigger: AAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCC...CCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGAGGGGTACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR TCA 90 bp CCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGATCAAGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 2 (lower is better)
Translates to: PCEGSGCRRWDWGLPGDQVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR TCA 90 bp CCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGATCAATGGCCCCAGGGGTGTTaGGGCTGTGAAGGGATCCAG +
Preference number: 2 (lower is better)
Translates to: PCEGSGCRRWDWGLPGDQWPQGC*GCEGIQ
Trigger: CTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCA...TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp GGTGGACGGGGACTTTCTGACTTGGAGATTTCCCGGGCTGCCCGGGGTTCGCACGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: GGRGLSDLEISRAARGSHGGADK*SRDAVD
Trigger: ATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCC...GTGCGAACCCCGGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCCGTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp GTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCCAGCTCCAGGTCAAGTaGTTGGGCCAGCTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: VPGTVKGVLGSPLLQRLFQLQVK*LGQLQQ
Trigger: CTGCTGGAGCTGGCCCAAGCACTTGACCTGGAGCTG...GAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp GGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTGAGGCGGCAAGAGAGAGGTaGGAGGGTGGACGGGGACTT +
Preference number: 2 (lower is better)
Translates to: GGRSGWEELRVIMAGKGEAARER*EGGRGL
Trigger: AAGTCCCCGTCCACCCTCCCACCTCTCTCTTGCCGC...CTCACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp AGACGCTTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGCAGCTCCAGGTCAAGTaGTTGGGCCAGCTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: RRFSMLLSRWNQRTVRGKQLQVK*LGQLQQ
Trigger: CTGCTGGAGCTGGCCCAAGCACTTGACCTGGAGCTG...CTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CGGGTACCCCTCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGTTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 2 (lower is better)
Translates to: RVPLCGGRGCGRLPQSQRFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...CCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGAGGGGTACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp CCACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGGTGACGGGCAGCCCTTaGGTCCAGTGTGGCCACCAC +
Preference number: 2 (lower is better)
Translates to: PQSLAKHARAPGIQPGTQVTGSP*VQCGHH
Trigger: GTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCAC...CTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp AGACGCTTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTCCAGGTCAAGTGCTTaGGCCAGCTCCAGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RRFSMLLSRWNQRTVRGKSRSSA*ASSSSR
Trigger: CCTGCTGCTGGAGCTGGCCCAAGCACTTGACCTGGA...CTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CAA 90 bp AGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTaGTGTACCGTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGG +
Preference number: 2 (lower is better)
Translates to: SPRYSARNTARMRHK*CTVGGWRLTSVSAG
Trigger: CCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CAA 90 bp TGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATaGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAG +
Preference number: 2 (lower is better)
Translates to: WPPLGPSLSQSSPQS*AKHARAPGIQPGTQ
Trigger: CTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR TCA 90 bp CTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCCTCCTGCGTACAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LSFTGPRWDLLSHSPLHSPPAYK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTGTACGCAGGAGG...ACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR TCA 90 bp AGACGCTTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGGAAATCGAGGCCCAGTaGGAGAGAGGGGAGATGGAG +
Preference number: 2 (lower is better)
Translates to: RRFSMLLSRWNQRTVRGKEIEAQ*ERGEME
Trigger: CTCCATCTCCCCTCTCTCTCACTGGGCCTCGATTTC...CTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678102.1
3UTR-3UTR GCA 90 bp GCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGAAAGGAAGCTACTGTTaGAGAACCAGCCCGAAGCCT +
Preference number: 2 (lower is better)
Translates to: ADRAREVAVEGGIGGSQEKGSYC*RTSPKP
Trigger: AGGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTT...CTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGGTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp TCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGAAAGGAAGCTACTGTTaGAGAACCAGCCCGAAGCCT +
Preference number: 2 (lower is better)
Translates to: SRDAVDPVVPPPSAAGLRKGSYC*RTSPKP
Trigger: AGGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTT...CCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp CACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTCCACGTGCCAACCTaGTGTCAGGGACCGCAGCGT +
Preference number: 2 (lower is better)
Translates to: HRAKGLPGLEVHHFLGMRLHVPT*CQGPQR
Trigger: ACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAG...TCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp AAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTCTCCACGTGCCAACCTaGTGTCAGGGACCGCAGCGT +
Preference number: 2 (lower is better)
Translates to: KGGRSGWEELRVIMAGKGLHVPT*CQGPQR
Trigger: ACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAG...ACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGATCAATTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 2 (lower is better)
Translates to: PCEGSGCRRWDWGLPGDQFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCT +
Preference number: 2 (lower is better)
Translates to: HRAKGLPGLEVHHFLGMRLPELH*PPLGPS
Trigger: AGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG...TCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp AGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 2 (lower is better)
Translates to: RRCGSSCPTTLRSRASGRPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...CCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp GTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCCCCTTGGGTCCAGTGTaGCCACCACATTGCCAAAGT +
Preference number: 2 (lower is better)
Translates to: VPGTVKGVLGSPLLQRLFPLGPV*PPHCQS
Trigger: ACTTTGGCAATGTGGTGGCCACACTGGACCCAAGGG...GAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp TTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGGGGGGTCGATCCGGGTaGGAAGAGCTTCGAGTCATA +
Preference number: 2 (lower is better)
Translates to: FSMLLSRWNQRTVRGKWLGGRSG*EELRVI
Trigger: TATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC...CAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp CTTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATCAGCTCCAGGTCAAGTaGTTGGGCCAGCTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LPQSQRAPRVGSTSLPGDQLQVK*LGQLQQ
Trigger: CTGCTGGAGCTGGCCCAAGCACTTGACCTGGAGCTG...ATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGCGTAAAGGGAGTCCTTaGGTCCCCACTCCTTCAGCG +
Preference number: 2 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQRKGSP*VPTPSA
Trigger: CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACG...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGAATAGACTCCATGAGCTaGGCCAGGTGCCGGGAACCG +
Preference number: 2 (lower is better)
Translates to: HRAKGLPGLEVHHFLGMRIDSMS*ARCREP
Trigger: CGGTTCCCGGCACCTGGCCCAGCTCATGGAGTCTAT...TCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCATGCTCCTCAGCCGATaGAACCAGCGGACCGTGCGA +
Preference number: 2 (lower is better)
Translates to: HSHWPSTLEPQVFSQEHSMLLSR*NQRTVR
Trigger: TCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCAT...GCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR TCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAATCACTTCCTGGGGATaGGACTGCAGCAGGTTCAAA +
Preference number: 2 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPITSWG*DCSRFK
Trigger: TTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGAT...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR TCA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGCCTCCAGGAACTTTCTaGCTTGGAGATTTCCCGGGC +
Preference number: 2 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQPPGTF*LGDFPG
Trigger: GCCCGGGAAATCTCCAAGTCAGAAAGTTCCTGGAGG...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677542.1
3UTR-3UTR TCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGTGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGG +
Preference number: 2 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLWVGGD*PRCPQG
Trigger: CCCCTGCGGACACCGAGGTCAATCTCCACCCACCCA...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR GCA 90 bp GAGATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTTCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: EIKKHKELNSLDPGGAGASKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...AGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp GGGGGCTCCCAGGAGATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 2 (lower is better)
Translates to: GGSQEIKKHKELNSLDPGGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...ACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTCCTGGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CTCCAGCAGCAGGGCACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 2 (lower is better)
Translates to: LQQQGTGHSRIRGPYKGGKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...ACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGAGGGGACTTTCTGACTTaGAGATTTCCCGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: HRAKGLPGLEVHHFLGMRGDFLT*RFPGLP
Trigger: GGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCC...TCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTTGTAGAAGGTGGGATTaGGGGCTCCCAGGAGATCAA +
Preference number: 2 (lower is better)
Translates to: LSFTGPRWDLLSHSPLHSCRRWD*GLPGDQ
Trigger: TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACA...ACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR TCA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAATGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGG +
Preference number: 2 (lower is better)
Translates to: YLVPANLWTKCLPLGREQWVGGD*PRCPQG
Trigger: CCCCTGCGGACACCGAGGTCAATCTCCACCCACCCA...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR GCA 90 bp CTTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGCAGACGCTTCTCAATaGTCCTCAGCCGATGGAACC +
Preference number: 2 (lower is better)
Translates to: LPQSQRAPRVGSTSLPGDADASQ*SSADGT
Trigger: GGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGC...ATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp GGGGGCTCCCAGGAGATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: GGSQEIKKHKELNSLDPGKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...ACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTCCTGGGAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp AGTACATCACTTCCTGGGGATGAGACTGCAGCAGGTTCAAACGGTGCAGACGCTATGCTCCTCAGCCGATaGAACCAGCGGACCGTGCGA +
Preference number: 2 (lower is better)
Translates to: STSLPGDETAAGSNGADAMLLSR*NQRTVR
Trigger: TCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCAT...AGCGTCTGCACCGTTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGATGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGTTGTGTACCGTGGGTaGGTGGAGATTGACCTCGGT +
Preference number: 2 (lower is better)
Translates to: HSHWPSTLEPQVFSQEHSVVYRG*VEIDLG
Trigger: ACCGAGGTCAATCTCCACCCACCCACGGTACACAAC...GCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR GCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGCCAGGAGGCGGAGTTTaGAGTGAGCCGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLPGGGV*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAAACTCCGCCTCCTGG...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAACTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCT +
Preference number: 2 (lower is better)
Translates to: YLVPANLWTKCLPLGREQLPELH*PPLGPS
Trigger: AGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp AGCACGGGTACCCCTCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 2 (lower is better)
Translates to: STGTPLRRKGMWSSSTEPKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...TGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp AGTACATCACTTCCTGGGGATGAGACTGCAGCAGGTTCAAACGGTGCAGACGCTGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 2 (lower is better)
Translates to: STSLPGDETAAGSNGADAAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...AGCGTCTGCACCGTTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: YLVPANLWTKCLPLGREQTLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR GCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGATCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGSKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR GCA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGGAACCAGCGGACCGTaGGAGGGAAGTGGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: YLVPANLWTKCLPLGREQGTSGP*EGSGCR
Trigger: TCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCC...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp AAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAACTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCT +
Preference number: 2 (lower is better)
Translates to: KFLFLWLSSHSGLFPVLELPELH*PPLGPS
Trigger: AGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG...TTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGCCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 2 (lower is better)
Translates to: WPSTLEPQVFSQEHSENAPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...CGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR TCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCGGCAGGAGAATGGCGTaGACCCAGGAGGCGGAGTTT +
Preference number: 2 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSGRRMA*TQEAEF
Trigger: AAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCC...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR GCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKETLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR GCA 90 bp GTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: VVSSLSLKGGSLRQSKERTLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...TCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR GCA 90 bp CACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCAGGCGCCCACCACCATaGCCAGCTAATTATTGTATT +
Preference number: 2 (lower is better)
Translates to: HSHWPSTLEPQVFSQEHSRRPPP*PANYCI
Trigger: AATACAATAATTAGCTGGGCATGGTGGTGGGCGCCT...GCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR GCA 90 bp TCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCTCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SLSLKGGSLRQSKERRSSSKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...GGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp CACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGATTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 2 (lower is better)
Translates to: HSGLFPVLEGWQLETIKRFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...TCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCT +
Preference number: 2 (lower is better)
Translates to: FPVLEGWQLETIKRKKVFLPELH*PPLGPS
Trigger: AGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG...GAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGGGGACTTTCTGACTTaGAGATTTCCCGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: YLVPANLWTKCLPLGREQGDFLT*RFPGLP
Trigger: GGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCC...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678102.1
3UTR-3UTR CCA 90 bp GTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGATTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 2 (lower is better)
Translates to: VVSSLSLKGGSLRQSKERFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...TCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 2 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAAAAAAGAACAGTATTTaGTCCCTGCAAACCTTTGGA +
Preference number: 2 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPKKNSI*SLQTFG
Trigger: TCCAAAGGTTTGCAGGGACCAAATACTGTTCTTTTT...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 2 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 2 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp TGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCCCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 2 (lower is better)
Translates to: WSLQTFGPSVYLWGGSKFPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...GAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCGTAAAGGGAGTCCTTaGGTCCCCACTCCTTCAGCG +
Preference number: 2 (lower is better)
Translates to: FPVLEGWQLETIKRKKVFRKGSP*VPTPSA
Trigger: CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACG...GAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAAGGAACTTTCTGACTTaGAGATTTCCCGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGRNFLT*RFPGLP
Trigger: GGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCT...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677542.1
3UTR-3UTR GCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAAGGCGCCCACCACCATaGCCAGCTAATTATTGTATT +
Preference number: 2 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGRRPPP*PANYCI
Trigger: AATACAATAATTAGCTGGGCATGGTGGTGGGCGCCT...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAACCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 2 (lower is better)
Translates to: YLVPANLWTKCLPLGREQPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGACCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTA +
Preference number: 2 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGPSVYL*GGSKFL
Trigger: TAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGG...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR TCA 90 bp TTACTTTTTCAGTTCGCTGACTTAAAGAACAGCATTTTGCCAGGTGCGGTGGCTATGGGACCTCAAACTTaGTGGGGAAATCGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LLFQFADLKNSILPGAVAMGPQT*WGNRGP
Trigger: TGGGCCTCGATTTCCCCATCAAGTTTGAGGTCCCAT...AGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678102.1
3UTR-3UTR GCA 90 bp CACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAACAGTATTTGGTCCCTaGAAACCTTTGGACCAAGTG +
Preference number: 2 (lower is better)
Translates to: HSGLFPVLEGWQLETIKRTVFGP*KPLDQV
Trigger: CACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT...TCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCCCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTA +
Preference number: 2 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSPSVYL*GGSKFL
Trigger: TAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGG...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp AAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAACCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTA +
Preference number: 2 (lower is better)
Translates to: KFLFLWLSSHSGLFPVLEPSVYL*GGSKFL
Trigger: TAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGG...TTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp AAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTCCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 2 (lower is better)
Translates to: KPLDQVFTSGEGASSYSSPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...AGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 2 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 2 (lower is better)
Translates to: SLSLKGGSLRQSKERRSSKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...GGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CAA 90 bp TGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTaGAGACAATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATT +
Preference number: 2 (lower is better)
Translates to: CHPTVVSSLSLKGGS*RQSKERRSSNCSTI
Trigger: AATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTGGGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCAAAAAGAACAGTATTTaGTCCCTGCAAACCTTTGGA +
Preference number: 2 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSKKNSI*SLQTFG
Trigger: TCCAAAGGTTTGCAGGGACCAAATACTGTTCTTTTT...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 72 bp GCTCCAGCAGCAGGGCACAGGGCACAGCCGAATCCGTaGCCCCTACAAAGGGGGTCGATCCGGGTGGGAAGA +
Preference number: 3 (lower is better)
Translates to: APAAGHRAQPNP*PLQRGSIRVGR
Trigger: TCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp AGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: RRCGSSCPTTLRSRASGRIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...CCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp TCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAG +
Preference number: 3 (lower is better)
Translates to: SSSTCQPAVRDRSVASRNTLWIQ*SHHPPQ
Trigger: CTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGT...GTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp TGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGGGTGACGGGCAGCCCTaGGGTCCAGTGTGGCCACCA +
Preference number: 3 (lower is better)
Translates to: CSSADGTSGPCEGSGCRRGDGQP*GPVWPP
Trigger: TGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACC...CCTTCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR TCA 72 bp AGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGCTGGGCCAGGTGCCGG +
Preference number: 3 (lower is better)
Translates to: SSIAWILVGPGL*GIDSMSWARCR
Trigger: CCGGCACCTGGCCCAGCTCATGGAGTCTATACCTCACAGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp TCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAATATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: SSCPTTLRSRASGRLPINIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...ATTGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp AAGGGCGTGGAGATGAGATGGAGCACGGGTACCCCTCTGCGGAGGAAGGGGATGAGTGTGGCCACCACATaGCCAAAGTCCACTGGCCCC +
Preference number: 3 (lower is better)
Translates to: KGVEMRWSTGTPLRRKGMSVATT*PKSTGP
Trigger: GGGGCCAGTGGACTTTGGCAATGTGGTGGCCACACT...CATCCCCTTCCTCCGCAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp TCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACCAGGAACTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 3 (lower is better)
Translates to: SSSTCQPAVRDRSVASRNQELSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCTG...GTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677542.1
3UTR TCA 72 bp TGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAG +
Preference number: 3 (lower is better)
Translates to: CGTSCVPWVGGD*PRCPQGCARQQ
Trigger: CTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR GCA 72 bp CCGGGGTTCGCACAACCAGCAGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGATCCAGTTGTCCCACCA +
Preference number: 3 (lower is better)
Translates to: PGFAQPAGGADK*SRDAVDPVVPP
Trigger: TGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCCTGCTGGTTGTGCGAACCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CCA 72 bp CCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCT +
Preference number: 3 (lower is better)
Translates to: PAHPRQILPELH*PPLGPSLSQSS
Trigger: AGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 72 bp GCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTaGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: ARMRHKLCTVGG*RLTSVSAGVCQ
Trigger: CTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 72 bp CCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAATaGGACCTCAAACTTGATGGGGAAATCGAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: PPQPGFGEASDQ*DLKLDGEIEAQ
Trigger: CTGGGCCTCGATTTCCCCATCAAGTTTGAGGTCCCATTGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678102.1
3UTR-3UTR CAA 90 bp GTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCAAAAGGAAGCTACTGTaGCAGAACCAGCCCGAAGCC +
Preference number: 3 (lower is better)
Translates to: VKGSSSTCQPAVRDRSVAKRKLL*QNQPEA
Trigger: GGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTT...GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp CAGCAGGGCACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCAATGGGACCTCAAACTaGATGGGGAAATCGAGGCCC +
Preference number: 3 (lower is better)
Translates to: QQGTGHSRIRGPYKGGRSNGTSN*MGKSRP
Trigger: GGGCCTCGATTTCCCCATCAAGTTTGAGGTCCCATT...GGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678102.1
3UTR TCA 72 bp CACCACATTGCCAAAGTCCACTGGCCCCAGGGGTGTTaGGGCTGTGAAGGGATCCAGCTCCACGTGCCAACC +
Preference number: 3 (lower is better)
Translates to: HHIAKVHWPQGC*GCEGIQLHVPT
Trigger: GGTTGGCACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCAGTGGACTTTGGCAATGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR TCA 72 bp GTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTaGGGTGACGGGCAGCCCTTGGGTCCAGTGTGGCCA +
Preference number: 3 (lower is better)
Translates to: VGRASSHNGRQG*GDGQPLGPVWP
Trigger: TGGCCACACTGGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR GCA 72 bp TCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTaGGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGG +
Preference number: 3 (lower is better)
Translates to: SQCSSADGTSGP*EGSGCRRWDWG
Trigger: CCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CCA 72 bp CACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTaGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTG +
Preference number: 3 (lower is better)
Translates to: HSENAAQVVYRG*VEIDLGVRRGV
Trigger: CACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CAA 90 bp ACCGTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAAAAAGGAAGCTACTGTaGCAGAACCAGCCCGAAGCC +
Preference number: 3 (lower is better)
Translates to: TVGGWRLTSVSAGVCQTAKRKLL*QNQPEA
Trigger: GGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTT...TGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp TTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAG +
Preference number: 3 (lower is better)
Translates to: LAKHARAPGIQPGTQRECTLWIQ*SHHPPQ
Trigger: CTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGT...GCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp TGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAAAGGGCTCCCCGGGTaGGAAGTACATCACTTCCTG +
Preference number: 3 (lower is better)
Translates to: CLSFTGPRWDLLSHSPLHKGLPG*EVHHFL
Trigger: CAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTT...GTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 72 bp CTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGTCCTCTCCACAGTCAT +
Preference number: 3 (lower is better)
Translates to: LGRSCLSFTGPR*DLLSHSPLHSH
Trigger: ATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 72 bp CGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTaGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: RIRGPYKGGRSG*EELRVIMAGKG
Trigger: ACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGGTCTCTTCCCTGTCCTaGAAGGGTGGCAGCTTGAGA +
Preference number: 3 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQVSSLS*KGGSLR
Trigger: TCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGAC...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CAA 90 bp TACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: YKGGRSGWEELRVIMAGKIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...CTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp GAGATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTCGGGGACTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 3 (lower is better)
Translates to: EIKKHKELNSLDPGGAGARGLSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCCG...AGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp AGTACATCACTTCCTGGGGATGAGACTGCAGCAGGTTCAAACGGTGCAGACGCTGGGGCTGCCTGTTTTTaGGCCCTGCTCAGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: STSLPGDETAAGSNGADAGAACF*ALLSSR
Trigger: CCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCC...AGCGTCTGCACCGTTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGATGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR TCA 72 bp GGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATaGGACTGCAGCAGGTTCAAACGGTGCAGACGCTTC +
Preference number: 3 (lower is better)
Translates to: GSPGWKYITSWG*DCSRFKRCRRF
Trigger: GAAGCGTCTGCACCGTTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR GCA 72 bp ATGAAAAGGACAAACCAGCACACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTC +
Preference number: 3 (lower is better)
Translates to: MKRTNQHTLGRS*LSFTGPRWDLL
Trigger: GAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR GCA 72 bp AGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATaGGGCACAAGTTGTGTACCGTGGGTGGGTGGAGAT +
Preference number: 3 (lower is better)
Translates to: RAPGIQPGTQRE*GTSCVPWVGGD
Trigger: ATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 72 bp TGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATTaGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: WDLLSHSPLHSH*PSTLEPQVFSQ
Trigger: CTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CAA 90 bp CCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGGGTCCCTGCAAACCTTaGGACCAAGTGTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: PLQRGSIRVGRASSHNGRGPCKP*DQVFTS
Trigger: AGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACC...CCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp AAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAAACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAG +
Preference number: 3 (lower is better)
Translates to: KFLFLWLSSHSGLFPVLETLWIQ*SHHPPQ
Trigger: CTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGT...TTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR-3UTR CAA 90 bp TATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTTAAAGAACAGCATTTaGCCAGGTGCGGTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: YSARNTARMRHKLCTVGGLKNSI*PGAVAH
Trigger: GTGAGCCACCGCACCTGGCAAAATGCTGTTCTTTAA...CCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR CCA 72 bp GTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTT +
Preference number: 3 (lower is better)
Translates to: VYLWGGSKFLFL*LSSHSGLFPVL
Trigger: AAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CAA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGGTCTCTTCCCTGTCCTaGAAGGGTGGCAGCTTGAGA +
Preference number: 3 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLVSSLS*KGGSLR
Trigger: TCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGAC...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CAA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGGGTCCCTGCAAACCTTaGGACCAAGTGTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLGPCKP*DQVFTS
Trigger: AGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACC...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR-3UTR CAA 90 bp AAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGTCTCTTCCCTGTCCTaGAAGGGTGGCAGCTTGAGA +
Preference number: 3 (lower is better)
Translates to: KPLDQVFTSGEGASSYSSVSSLS*KGGSLR
Trigger: TCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGAC...AGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
3UTR GCA 72 bp TCAATGGGACCTTTCCTCTTAAAAGGAAGCTACTGTTaGAGAACCAGCCCGAAGCCTTATTCCTTTGGTAAG +
Preference number: 3 (lower is better)
Translates to: SMGPFLLKGSYC*RTSPKPYSFGK
Trigger: CTTACCAAAGGAATAAGGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTTAAGAGGAAAGGTCCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000677542.1
3UTR GCA 72 bp TATTTCAGACCTTTCCTCTTAAAAGGAAGCTACTGTTaGAGAACCAGCCCGAAGCCTTATTCCTTTGGTAAG +
Preference number: 3 (lower is better)
Translates to: YFRPFLLKGSYC*RTSPKPYSFGK
Trigger: CTTACCAAAGGAATAAGGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTTAAGAGGAAAGGTCTGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678102.1
CDS-3UTR TCA 90 bp GCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGCAGGCAAGGGTGAGGTaGCGGGCAGCCCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ADRAREVAVEGGIGGSQEQARVR*RAALGS
Trigger: GGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTG...CTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGGTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CTCCAGCAGCAGGGCACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTGTGTCCGCAGGGGTGTaGCAGACAGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LQQQGTGHSRIRGPYKGGVSAGV*QTAGKG
Trigger: GCCCTTCCCTGCTGTCTGGCACACCCCTGCGGACAC...ACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AGTGCTCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCGGCCCCCGGAACGCATaGCCGCTTTGCCCTGAAACC +
Preference number: 4 (lower is better)
Translates to: SAPETLWIQLSHHPPQPGGPRNA*PLCPET
Trigger: GGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCC...GCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGGGCCCCCGGAACGCATaGCCGCTTTGCCCTGAAACC +
Preference number: 4 (lower is better)
Translates to: ADRAREVAVEGGIGGSQEGPRNA*PLCPET
Trigger: GGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCC...CTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGGTCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGGGTGACGGGCAGCCCTTaGGTCCAGTGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: VGGWRLTSVSAGVCQTAGVTGSP*VQCGHH
Trigger: GTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCAC...CCCTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCGGCGTGGAGATGAGATaGAGCACGGGTACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: DAVDPVVPPPSAAGLRGGGVEMR*STGTPL
Trigger: CAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCC...GCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGTCAGGGACCGCAGCGTaGCCTCCAGGAACTAGCGGC +
Preference number: 4 (lower is better)
Translates to: ADRAREVAVEGGIGGSQESGTAA*PPGTSG
Trigger: GCCGCTAGTTCCTGGAGGCCACGCTGCGGTCCCTGA...CTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGGTCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR TCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCGCAAGAGTGGCTCCATaGGGCCACGTTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLARVAP*GHVPPA
Trigger: GGCTGGGGGAACGTGGCCTCATGGAGCCACTCTTGC...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 4 (lower is better)
Translates to: VKGSSSTCQPAVRDRSVAGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGGGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 4 (lower is better)
Translates to: VGGWRLTSVSAGVCQTAGGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...CCCTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AGTGCTCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCGCACGGGTACCCCTCTaGGGAGGAAGGGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: SAPETLWIQLSHHPPQPGARVPL*GGRGCG
Trigger: ACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGC...GCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCGGCGGCAAGAGTaGCTCCATGAGGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: RRCGSSCPTTLRSRASGRLRRQE*LHEATF
Trigger: GAACGTGGCCTCATGGAGCCACTCTTGCCGCCGAAG...CCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CAA 72 bp GCGCAGATAAGTGCTCCAGAGACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: AQISAPETLWIQ*SHHPPQPGFGE
Trigger: CTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATCTGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp ACCGTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCATGGCCCCAGGGGTGTTaGGGCTGTGAAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: TVGGWRLTSVSAGVCQTAWPQGC*GCEGIQ
Trigger: CTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCA...TGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GAGGCTGTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: EAVKGSSSTCQPAVRDRSVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...GCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCACAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp TGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CSSADGTSGPCEGSGCRRWVGGD*PRCPQG
Trigger: CCCCTGCGGACACCGAGGTCAATCTCCACCCACCCA...CCTTCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp CCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTTGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PNPWPLQRGSIRVGRASSWVGGD*PRCPQG
Trigger: CCCCTGCGGACACCGAGGTCAATCTCCACCCACCCA...ACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACTCCTCAGTCCTGCGGTaGCAGCCGCTCCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: SSSTCQPAVRDRSVASRNSSVLR*QPLQMV
Trigger: CACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGA...GTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 4 (lower is better)
Translates to: QVPGTVKGVLGSPLLQRLGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...GAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAATGGGACCTTTCCCAGCTCCAGGTCAAGTaGTTGGGCCAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HHPPQPGFGEASDQWDLSQLQVK*LGQLQQ
Trigger: CTGCTGGAGCTGGCCCAAGCACTTGACCTGGAGCTG...GGAAAGGTCCCATTGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000677542.1
CDS-3UTR GCA 90 bp TCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCGTGTCCGCAGGGGTGTaGCAGACAGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SCLSFTGPRWDLLSHSPLVSAGV*QTAGKG
Trigger: GCCCTTCCCTGCTGTCTGGCACACCCCTGCGGACAC...GAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACCCAGGAGGCGGAGTTTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: SSSTCQPAVRDRSVASRNPGGGV*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAAACTCCGCCTCCTGG...GTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp AGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGGTGATCTTGGCTCACTaGAACCTCCGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: RRCGSSCPTTLRSRASGRVILAH*NLRLLR
Trigger: ACGCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCAC...CCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678102.1
CDS-3UTR CCA 90 bp GGGCCAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGGCCAGCCGCTCCAAATaGTGTAGAACGCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GPGAGNRKGSPWVPTPSAASRSK*CRTPSP
Trigger: TGGGCTCGGCGTTCTACACCATTTGGAGCGGCTGGC...CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGGGCCAGCCGCTCCAAATaGTGTAGAACGCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VGGWRLTSVSAGVCQTAGASRSK*CRTPSP
Trigger: TGGGCTCGGCGTTCTACACCATTTGGAGCGGCTGGC...CCCTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCGAGGCTTCCGATCAATaGGACCCGCAGCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SCLSFTGPRWDLLSHSPLEASDQ*DPQLPA
Trigger: GGCCGGGAGCTGCGGGTCCCATTGATCGGAAGCCTC...GAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678862.1
CDS-3UTR CCA 90 bp CCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTGTGACGGGCAGCCCTTaGGTCCAGTGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PNPWPLQRGSIRVGRASSVTGSP*VQCGHH
Trigger: GTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCAC...ACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAATGCTCCTCAGCCGATaGAACCAGCGGACCGTGCGA +
Preference number: 4 (lower is better)
Translates to: HRAQPNPWPLQRGSIRVGMLLSR*NQRTVR
Trigger: TCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCAT...TCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCCTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLLPELH*PPLGPS
Trigger: AGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCGGGGTGTTGAGGCTGTaGAGGGATCCAGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: QVPGTVKGVLGSPLLQRLGVLRL*RDPAPR
Trigger: ACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCC...GAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCATGGCCCCAGGGGTGTTaGGGCTGTGAAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPWPQGC*GCEGIQ
Trigger: CTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCA...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCAGGCAAGGGTGAGGTaGCGGGCAGCCCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GNRKGSPWVPTPSAPLHHQARVR*RAALGS
Trigger: GGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTG...ATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGAAGGGCGTGGAGATaGGATGGAGCACGGGTACCC +
Preference number: 4 (lower is better)
Translates to: DKPAHPRQILPELHWPPLGRAWR*DGARVP
Trigger: GGGTACCCGTGCTCCATCTCATCTCCACGCCCTTCC...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ELHWPPLGPSLSQSSPQSWVGGD*PRCPQG
Trigger: CCCCTGCGGACACCGAGGTCAATCTCCACCCACCCA...TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAGAAATCGAGGCCCAGTaGGAGAGAGGGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: HRAQPNPWPLQRGSIRVGEIEAQ*ERGEME
Trigger: CTCCATCTCCCCTCTCTCTCACTGGGCCTCGATTTC...TCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678102.1
CDS-3UTR GCA 90 bp CAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTCCTCAGTCCTGCGGTaGCAGCCGCTCCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: QVPGTVKGVLGSPLLQRLSSVLR*QPLQMV
Trigger: CACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGA...GAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAGCAGCTCCTCAGTCCTaGGGTGCCAGCCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPAAPQS*GASRSK
Trigger: TTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGC...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACGCAGCTCCTCAGTCCTaGGGTGCCAGCCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CLSFTGPRWDLLSHSPLHAAPQS*GASRSK
Trigger: TTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGC...GTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCGCAGCTCCTCAGTCCTaGGGTGCCAGCCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PGTVKGVLGSPLLQRLFTAAPQS*GASRSK
Trigger: TTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGC...GGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTGCAGCTCCTCAGTCCTaGGGTGCCAGCCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PNPWPLQRGSIRVGRASSAAPQS*GASRSK
Trigger: TTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGC...ACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTGCAGCTCCTCAGTCCTaGGGTGCCAGCCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GRSCLSFTGPRWDLLSHSAAPQS*GASRSK
Trigger: TTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGC...ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGCTCCACGTGCCAACCTaGTGTCAGGGACCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: CSSADGTSGPCEGSGCRRLHVPT*CQGPQR
Trigger: ACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAG...CCTTCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp AGCAGCAGGGCACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATTCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSRAQGTAESVAPTKGVDSKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...ATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACTAGGAACCAGCGGACCGTaGGAGGGAAGTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QLHVPTCCQGPQRGLQELGTSGP*EGSGCR
Trigger: TCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCC...TAGTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAGCACGGGTACCCCTCTaGGGAGGAAGGGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPARVPL*GGRGCG
Trigger: ACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGC...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CGGGTACCCCTCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGGCACGGGTACCCCTCTaGGGAGGAAGGGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: RVPLCGGRGCGRLPQSQRARVPL*GGRGCG
Trigger: ACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGC...CCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGAGGGGTACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGGCTCCCCGGGACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SAEEGDVVVFHRAKGLPGTLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...CCCGGGGAGCCCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTGAGAGCAACAGCTGCGGCTaGACCAGCCCACCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GGRSGWEELRVIMAGKGESNSCG*TSPPHS
Trigger: GCTGTGGGGTGGGCTGGTGCAGCCGCAGCTGTTGCT...CTCACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGGGGTCGATCCGGGTaGGAAGAGCTTCGAGTCATA +
Preference number: 4 (lower is better)
Translates to: SRDAVDPVVPPPSAAGLRGGRSG*EELRVI
Trigger: TATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC...CCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTGCACAGCCGAATCCGTaGCCCCTACAAAGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: PNPWPLQRGSIRVGRASSAQPNP*PLQRGS
Trigger: CGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGC...ACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCCAGGTCAAGTGCTTaGGCCAGCTCCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLSRSSA*ASSSSR
Trigger: CCTGCTGCTGGAGCTGGCCCAAGCACTTGACCTGGA...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGCGTAAAGGGAGTCCTTaGGTCCCCACTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: SRDAVDPVVPPPSAAGLRRKGSP*VPTPSA
Trigger: CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACG...CCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GGGCCAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGTGTACCGTGGGTGGGTaGAGATTGACCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GPGAGNRKGSPWVPTPSACTVGG*RLTSVS
Trigger: GGACACCGAGGTCAATCTCCACCCACCCACGGTACA...CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPLPELH*PPLGPS
Trigger: AGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCACCTCCAGGAACTTTCTaGCTTGGAGATTTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: DPVVPPPSAAGLRGGFRSPPGTF*LGDFPG
Trigger: GCCCGGGAAATCTCCAAGTCAGAAAGTTCCTGGAGG...TGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677542.1
CDS-3UTR TCA 90 bp TGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACGGGGTGTTGAGGCTGTaGAGGGATCCAGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: CLSFTGPRWDLLSHSPLHGVLRL*RDPAPR
Trigger: ACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCC...GTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACAGGCAAGGGTGAGGTaGCGGGCAGCCCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HRAKGLPGLEVHHFLGMRQARVR*RAALGS
Trigger: GGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTG...TCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: LSFTGPRWDLLSHSPLHSVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...ACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCATGGGGTTGGTTCCCCTaGGAATGGCACGACCCAAAT +
Preference number: 4 (lower is better)
Translates to: DPVVPPPSAAGLRGGFRSWGWFP*EWHDPN
Trigger: ATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCA...TGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp ACCGTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCAGGTCATGCGCTCAGATaGCGAAGACGGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TVGGWRLTSVSAGVCQTAGHALR*RRRWHL
Trigger: CAGATGCCACCGTCTTCGTCATCTGAGCGCATGACC...TGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCTCCTCAGTCCTGCGGTaGCAGCCGCTCCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: SCLSFTGPRWDLLSHSPLSSVLR*QPLQMV
Trigger: CACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGA...GAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp ATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTGCAGCTCCTCAGTCCTaGGGTGCCAGCCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ILPELHWPPLGPSLSQSSAAPQS*GASRSK
Trigger: TTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGC...AGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLGGADK*SRDAVD
Trigger: ATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCC...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: QVPGTVKGVLGSPLLQRLGGADK*SRDAVD
Trigger: ATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCC...GAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGCAGCTCCAGGTCAAGTaGTTGGGCCAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DKPAHPRQILPELHWPPLQLQVK*LGQLQQ
Trigger: CTGCTGGAGCTGGCCCAAGCACTTGACCTGGAGCTG...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTTCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GAGNRKGSPWVPTPSAPLSKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...AAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAATGGGACCTTTCCGCAGACGCTTCTCAATaGTCCTCAGCCGATGGAACC +
Preference number: 4 (lower is better)
Translates to: HHPPQPGFGEASDQWDLSADASQ*SSADGT
Trigger: GGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGC...GGAAAGGTCCCATTGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000677542.1
CDS-3UTR GCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPTLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCGTGATCTTGGCTCACTaGAACCTCCGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLVILAH*NLRLLR
Trigger: ACGCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCAC...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCGGCCCCCGGAACGCATaGCCGCTTTGCCCTGAAACC +
Preference number: 4 (lower is better)
Translates to: GTVKGVLGSPLLQRLFTIGPRNA*PLCPET
Trigger: GGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCC...GATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGCTTCGGCGGCAAGAGTaGCTCCATGAGGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: DKPAHPRQILPELHWPPLLRRQE*LHEATF
Trigger: GAACGTGGCCTCATGGAGCCACTCTTGCCGCCGAAG...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCGCCAGCCGCTCCAAATaGTGTAGAACGCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SCLSFTGPRWDLLSHSPLASRSK*CRTPSP
Trigger: TGGGCTCGGCGTTCTACACCATTTGGAGCGGCTGGC...GAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACGCCAGCCGCTCCAAATaGTGTAGAACGCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AGNRKGSPWVPTPSAPLHASRSK*CRTPSP
Trigger: TGGGCTCGGCGTTCTACACCATTTGGAGCGGCTGGC...GTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCAGAGGCTTCCGATCAATaGGACCCGCAGCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GSPWVPTPSAPLHHPRRAEASDQ*DPQLPA
Trigger: GGCCGGGAGCTGCGGGTCCCATTGATCGGAAGCCTC...TGCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591606.1
CDS-3UTR CCA 90 bp TCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGGCTCCCCGGGGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: SAEEGDVVVFHRAKGLPGAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...CCCGGGGAGCCCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCACCCTTGGGTCCAGTGTaGCCACCACATTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: DPVVPPPSAAGLRGGFRSPLGPV*PPHCQS
Trigger: ACTTTGGCAATGTGGTGGCCACACTGGACCCAAGGG...TGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGGTGACGGGCAGCCCTTaGGTCCAGTGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: WPSTLEPQVFSQEHSENAVTGSP*VQCGHH
Trigger: GTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCAC...CGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCGGGGGTCGATCCGGGTaGGAAGAGCTTCGAGTCATA +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLGGRSG*EELRVI
Trigger: TATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTGCACAGCCGAATCCGTaGCCCCTACAAAGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: ILPELHWPPLGPSLSQSSAQPNP*PLQRGS
Trigger: CGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGC...AGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACTCCAGGTCAAGTGCTTaGGCCAGCTCCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGNRKGSPWVPTPSAPLHSRSSA*ASSSSR
Trigger: CCTGCTGCTGGAGCTGGCCCAAGCACTTGACCTGGA...GTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGATAGACTCCATGAGCTaGGCCAGGTGCCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: DKPAHPRQILPELHWPPLIDSMS*ARCREP
Trigger: CGGTTCCCGGCACCTGGCCCAGCTCATGGAGTCTAT...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCATAGACTCCATGAGCTaGGCCAGGTGCCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: VPGTVKGVLGSPLLQRLFIDSMS*ARCREP
Trigger: CGGTTCCCGGCACCTGGCCCAGCTCATGGAGTCTAT...GAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAGGCGTGGAGATGAGATaGAGCACGGGTACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPGVEMR*STGTPL
Trigger: CAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCC...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACTTTGTACCGTGGGTGGGTaGAGATTGACCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLHVPTCCQGPQRGLQELCTVGG*RLTSVS
Trigger: GGACACCGAGGTCAATCTCCACCCACCCACGGTACA...AAGTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677542.1
CDS-3UTR CCA 90 bp GTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCGTTGTGTACCGTGGGTaGGTGGAGATTGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: VKGSSSTCQPAVRDRSVAVVYRG*VEIDLG
Trigger: ACCGAGGTCAATCTCCACCCACCCACGGTACACAAC...GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TACCGTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCCCTCTCCACAGTCATTaGCCAAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: YRGWVEIDLGVRRGVPDSPLHSH*PSTLEP
Trigger: GGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGG...GCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CATGAGCTGGGCCAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCGGGGACTTTCTGACTTaGAGATTTCCCGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HELGQVPGTVKGVLGSPLGDFLT*RFPGLP
Trigger: GGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCC...GAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCCAGCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR TCA 90 bp TTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGGGGGTGTTGAGGCTGTaGAGGGATCCAGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: FSMLLSRWNQRTVRGKWLGVLRL*RDPAPR
Trigger: ACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCC...CAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp GGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCAGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GSPWVPTPSAPLHHPRRAVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...TGCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CTTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATTGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LPQSQRAPRVGSTSLPGDWVGGD*PRCPQG
Trigger: CCCCTGCGGACACCGAGGTCAATCTCCACCCACCCA...ATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCCTGCGTACAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRSCLSFTGPRWDLLSHSPPAYK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTGTACGCAGGAGG...ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GGGCCAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGATGGGACCTCAAACTTaGTGGGGAAATCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GPGAGNRKGSPWVPTPSAMGPQT*WGNRGP
Trigger: TGGGCCTCGATTTCCCCATCAAGTTTGAGGTCCCAT...CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678102.1
CDS-3UTR GCA 90 bp GTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCAACGCATGGCCGCTTTaGCCTGAAACCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: VKGSSSTCQPAVRDRSVANAWPL*PETCTR
Trigger: TCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTT...GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATCCTCAGTCCTGCGGTaGCAGCCGCTCCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: ELHWPPLGPSLSQSSPQSSSVLR*QPLQMV
Trigger: CACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGA...TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CGGGGACTTTCTGACTTGGAGATTTCCCGGGCTGCCCGGGGTTCGCACAACCAGGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: RGLSDLEISRAARGSHNQGGADK*SRDAVD
Trigger: ATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCC...CTGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PGTVKGVLGSPLLQRLFTGGADK*SRDAVD
Trigger: ATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCC...GGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGACCTCGTGTCCGCAGGGGTGTaGCAGACAGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HSENAAQVVYRGWVEIDLVSAGV*QTAGKG
Trigger: GCCCTTCCCTGCTGTCTGGCACACCCCTGCGGACAC...GAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCAGGCGCCCACCACCATaGCCAGCTAATTATTGTATT +
Preference number: 4 (lower is better)
Translates to: DAVDPVVPPPSAAGLRGGRRPPP*PANYCI
Trigger: AATACAATAATTAGCTGGGCATGGTGGTGGGCGCCT...GCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678102.1
CDS-3UTR CCA 90 bp CTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCTTCGGCGGCAAGAGTaGCTCCATGAGGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: LSFTGPRWDLLSHSPLHSLRRQE*LHEATF
Trigger: GAACGTGGCCTCATGGAGCCACTCTTGCCGCCGAAG...ACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CAGGGGGCGCAGATAAGTGCTCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCTTCGGCGGCAAGAGTaGCTCCATGAGGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: QGAQISAPETLWIQLSHHLRRQE*LHEATF
Trigger: GAACGTGGCCTCATGGAGCCACTCTTGCCGCCGAAG...GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGACCTCGTGACGGGCAGCCCTTaGGTCCAGTGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: HSENAAQVVYRGWVEIDLVTGSP*VQCGHH
Trigger: GTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCAC...GAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACGTAAAGGGAGTCCTTaGGTCCCCACTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPRKGSP*VPTPSA
Trigger: CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACG...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGATCAAAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PCEGSGCRRWDWGLPGDQKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCAAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ELHWPPLGPSLSQSSPQSKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTGTAGAAGGTGGGATTaGGGGCTCCCAGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: VKGSSSTCQPAVRDRSVACRRWD*GLPGDQ
Trigger: TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACA...GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACTAAAGGGCTCCCCGGGTTaGAAGTACATCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QLHVPTCCQGPQRGLQELKGSPG*KYITSW
Trigger: CCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTT...TAGTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TGCAGACGCTTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGCCTCTCCACAGTCATTaGCCAAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: CRRFSMLLSRWNQRTVRGPLHSH*PSTLEP
Trigger: GGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGG...CCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCTGCCCGGGGTTCGCACAACCAGCAGGGGGCGCAGATAAGTGCTCCAGAGACGATGGCACGACCCAAATaGGAGCGCAAGAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: AARGSHNQQGAQISAPETMARPK*ERKRSR
Trigger: CCTACTTCTCTTGCGCTCCCATTTGGGTCGTGCCAT...CGTCTCTGGAGCACTTATCTGCGCCCCCTGCTGGTTGTGCGAACCCCGGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACATGGCACGACCCAAATaGGAGCGCAAGAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SSSTCQPAVRDRSVASRNMARPK*ERKRSR
Trigger: CCTACTTCTCTTGCGCTCCCATTTGGGTCGTGCCAT...GTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAATGGGACCTTTCCTCCCCATGGAATCGGTaGGCCAATAAGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: HHPPQPGFGEASDQWDLSSPWNR*ANKQQL
Trigger: CAGCTGTTGCTTATTGGCCCACCGATTCCATGGGGA...GGAAAGGTCCCATTGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000677542.1
CDS-3UTR CCA 90 bp GCTGCCCGGGGTTCGCACAACCAGCAGGGGGCGCAGATAAGTGCTCCAGAGACGCCAAGTTCCTCCCCATaGAATCGGTGGGCCAATAAG +
Preference number: 4 (lower is better)
Translates to: AARGSHNQQGAQISAPETPSSSP*NRWANK
Trigger: CTTATTGGCCCACCGATTCCATGGGGAGGAACTTGG...CGTCTCTGGAGCACTTATCTGCGCCCCCTGCTGGTTGTGCGAACCCCGGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCAAGCCACGTCAACCCTaGGTAACAGCGGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PGTVKGVLGSPLLQRLFTKPRQP*VTAGRE
Trigger: TTCCCTCCCCGCTGTTACCCAGGGTTGACGTGGCTT...GGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTAAGCCACGTCAACCCTaGGTAACAGCGGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRSCLSFTGPRWDLLSHSKPRQP*VTAGRE
Trigger: TTCCCTCCCCGCTGTTACCCAGGGTTGACGTGGCTT...ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCAGCGGCAAGAGAGAGGTaGGAGGGTGGACGGGGACTT +
Preference number: 4 (lower is better)
Translates to: GSPWVPTPSAPLHHPRRAAARER*EGGRGL
Trigger: AAGTCCCCGTCCACCCTCCCACCTCTCTCTTGCCGC...TGCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGTCAGGGACCGCAGCGTaGCCTCCAGGAACTAGCGGC +
Preference number: 4 (lower is better)
Translates to: FHRAKGLPGLEVHHFLGMSGTAA*PPGTSG
Trigger: GCCGCTAGTTCCTGGAGGCCACGCTGCGGTCCCTGA...CATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCAACGCTTCTAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ELHWPPLGPSLSQSSPQSTLLIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTAGAAGCGT...TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678862.1
3UTR CAA 72 bp ATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATaGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: MRHKLCTVGGWR*TSVSAGVCQTA
Trigger: TGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGCCTCCAGGAACTTTCTaGCTTGGAGATTTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: DKPAHPRQILPELHWPPLPPGTF*LGDFPG
Trigger: GCCCGGGAAATCTCCAAGTCAGAAAGTTCCTGGAGG...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGGGGGTGTTGAGGCTGTaGAGGGATCCAGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: PQSQRAPRVGSTSLPGDEGVLRL*RDPAPR
Trigger: ACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCC...CTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGACCTCGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: HSENAAQVVYRGWVEIDLVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...GAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CTCCAGCAGCAGGGCACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTATCACTTCCTGGGGATaGGACTGCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LQQQGTGHSRIRGPYKGGITSWG*DCSRFK
Trigger: TTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGAT...ACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp CTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATTGGGCAGGAGAATGGCGTaGACCCAGGAGGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LHWPPLGPSLSQSSPQSLGRRMA*TQEAEF
Trigger: AAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCC...CAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp ATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCTCCTGCGTACAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ILPELHWPPLGPSLSQSSPPAYK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTGTACGCAGGAGG...AGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATTCCGTGGCCCCTTTCTaGCTTGGAGATTTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GNRKGSPWVPTPSAPLHHSVAPF*LGDFPG
Trigger: GCCCGGGAAATCTCCAAGTCAGAAAGGGGCCACGGA...ATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591606.1
CDS-3UTR TCA 90 bp CCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTTGGGGTTGGTTCCCCTaGGAATGGCACGACCCAAAT +
Preference number: 4 (lower is better)
Translates to: PNPWPLQRGSIRVGRASSWGWFP*EWHDPN
Trigger: ATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCA...ACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp GGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTGAGGGTCATGCGCTCAGATaGCGAAGACGGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GGRSGWEELRVIMAGKGEGHALR*RRRWHL
Trigger: CAGATGCCACCGTCTTCGTCATCTGAGCGCATGACC...CTCACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp CAGGGGGCGCAGATAAGTGCTCCAGAGACGCTGTGGATCCAGTTGTCCCACCACGGTCATGCGCTCAGATaGCGAAGACGGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: QGAQISAPETLWIQLSHHGHALR*RRRWHL
Trigger: CAGATGCCACCGTCTTCGTCATCTGAGCGCATGACC...GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCTCCTCAGTCCTGCGGTaGCAGCCGCTCCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: GTVKGVLGSPLLQRLFTISSVLR*QPLQMV
Trigger: CACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGA...GATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCAGTCTCCACGTGCCAACCTaGTGTCAGGGACCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: ESLGPHSFSASSPSKKSSLHVPT*CQGPQR
Trigger: ACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAG...ACTGCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp AGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCCAGCTCCAGGTCAAGTaGTTGGGCCAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RESLGPHSFSASSPSKKSQLQVK*LGQLQQ
Trigger: CTGCTGGAGCTGGCCCAAGCACTTGACCTGGAGCTG...GCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATTGTCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LHWPPLGPSLSQSSPQSLSKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...CAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGGGAACCAGCGGACCGTaGGAGGGAAGTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: PLQRGSIRVGRASSHNGRGTSGP*EGSGCR
Trigger: TCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCC...CCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTGCAGACGCTTCTCAATaGTCCTCAGCCGATGGAACC +
Preference number: 4 (lower is better)
Translates to: GRSCLSFTGPRWDLLSHSADASQ*SSADGT
Trigger: GGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGC...ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTGTGATCTTGGCTCACTaGAACCTCCGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LSFTGPRWDLLSHSPLHSVILAH*NLRLLR
Trigger: ACGCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCAC...ACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCAAAGGAAGCTACTGTTaGAGAACCAGCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: VKGSSSTCQPAVRDRSVAKGSYC*RTSPKP
Trigger: AGGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTT...GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGGCCAGCCGCTCCAAATaGTGTAGAACGCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQASRSK*CRTPSP
Trigger: TGGGCTCGGCGTTCTACACCATTTGGAGCGGCTGGC...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AGGAACACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGGAGGCTTCCGATCAATaGGACCCGCAGCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: RNTARMRHKLCTVGGWRLEASDQ*DPQLPA
Trigger: GGCCGGGAGCTGCGGGTCCCATTGATCGGAAGCCTC...CAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678862.1
CDS-3UTR CCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCAGGAACTTTCTGACTTaGAGATTTCCCGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLRNFLT*RFPGLP
Trigger: GGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCT...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCTCCAGGTCAAGTGCTTaGGCCAGCTCCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTVKGVLGSPLLQRLFTISRSSA*ASSSSR
Trigger: CCTGCTGCTGGAGCTGGCCCAAGCACTTGACCTGGA...GATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCAAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GSPWVPTPSAPLHHPRRAKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...TGCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACGTTGTGTACCGTGGGTaGGTGGAGATTGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: CLSFTGPRWDLLSHSPLHVVYRG*VEIDLG
Trigger: ACCGAGGTCAATCTCCACCCACCCACGGTACACAAC...GTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCAGGCCCCTTTCTGACTTaGAGATTTCCCGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GSPWVPTPSAPLHHPRRAGPFLT*RFPGLP
Trigger: GGGCAGCCCGGGAAATCTCCAAGTCAGAAAGGGGCC...TGCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591606.1
CDS-3UTR CCA 90 bp AAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTGCGGCAAGAGAGAGGTaGGAGGGTGGACGGGGACTT +
Preference number: 4 (lower is better)
Translates to: KGGRSGWEELRVIMAGKGAARER*EGGRGL
Trigger: AAGTCCCCGTCCACCCTCCCACCTCTCTCTTGCCGC...ACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR TCA 90 bp CCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGATGGCCGCTTTGCCCTaGAACCTGTACCAGACCACG +
Preference number: 4 (lower is better)
Translates to: PLQRGSIRVGRASSHNGRMAALP*NLYQTT
Trigger: CGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCCAT...CCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp GTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAATGGCCCCAGGGGTGTTaGGGCTGTGAAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: VKGVLGSPLLQRLFTIQEWPQGC*GCEGIQ
Trigger: CTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCA...TTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp GAGATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: EIKKHKELNSLDPGGAGAVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...AGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp TCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGGCTCCCCGGGATCACTTCCTGGGGATaGGACTGCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SAEEGDVVVFHRAKGLPGITSWG*DCSRFK
Trigger: TTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGAT...CCCGGGGAGCCCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CTTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGGCAGGAGAATGGCGTaGACCCAGGAGGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LPQSQRAPRVGSTSLPGDGRRMA*TQEAEF
Trigger: AAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCC...ATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp AGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCTGGACGGGGACTTTCTaGCTTGGAGATTTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: RESLGPHSFSASSPSKKSWTGTF*LGDFPG
Trigger: GCCCGGGAAATCTCCAAGTCAGAAAGTCCCCGTCCA...GCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGAACGCATGGCCGCTTTaGCCTGAAACCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: DKPAHPRQILPELHWPPLNAWPL*PETCTR
Trigger: TCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTT...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGCTCCACGTGCCAACCTaGTGTCAGGGACCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: YKGGRSGWEELRVIMAGKLHVPT*CQGPQR
Trigger: ACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAG...CTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCTCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LAKHARAPGIQPGTQRECSKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...GCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TCCTCTCCACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAGGAACCAGCGGACCGTaGGAGGGAAGTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSPQSLAKHARAPGIQPGGTSGP*EGSGCR
Trigger: TCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCC...TCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp AAGGGCGTGGAGATGAGATGGAGCACGGGTACCCCTCTGCGGAGGAAGGGGATGGGAACACAGCGAGAATaGGGCACAAGTTGTGTACCG +
Preference number: 4 (lower is better)
Translates to: KGVEMRWSTGTPLRRKGMGTQRE*GTSCVP
Trigger: CGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCC...CATCCCCTTCCTCCGCAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HSHWPSTLEPQVFSQEHSTLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...GCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CTGGGGAGGGAGCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTGAGGCTTCCGATCAATaGGACCCGCAGCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LGREQVLIPLAVIPQWSLEASDQ*DPQLPA
Trigger: GGCCGGGAGCTGCGGGTCCCATTGATCGGAAGCCTC...AAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678862.1
CDS-3UTR CCA 90 bp GGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTAGGAACTTTCTGACTTaGAGATTTCCCGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRSCLSFTGPRWDLLSHSRNFLT*RFPGLP
Trigger: GGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCT...ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTGAGCCCTTGGGTCCAGTGTaGCCACCACATTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GGRSGWEELRVIMAGKGEPLGPV*PPHCQS
Trigger: ACTTTGGCAATGTGGTGGCCACACTGGACCCAAGGG...CTCACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTTCCAGGTCAAGTGCTTaGGCCAGCTCCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KGGRSGWEELRVIMAGKGSRSSA*ASSSSR
Trigger: CCTGCTGCTGGAGCTGGCCCAAGCACTTGACCTGGA...ACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGATCCAGGTCAAGTGCTTaGGCCAGCTCCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HRAKGLPGLEVHHFLGMRSRSSA*ASSSSR
Trigger: CCTGCTGCTGGAGCTGGCCCAAGCACTTGACCTGGA...TCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCGTAAAGGGAGTCCTTaGGTCCCCACTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: GTVKGVLGSPLLQRLFTIRKGSP*VPTPSA
Trigger: CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACG...GATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp ACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TVKGVLGSPLLQRLFTIQKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...TTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACTGTAGAAGGTGGGATTaGGGGCTCCCAGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: AGNRKGSPWVPTPSAPLHCRRWD*GLPGDQ
Trigger: TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACA...GTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAATGCTCCTCAGCCGATaGAACCAGCGGACCGTGCGA +
Preference number: 4 (lower is better)
Translates to: NRKGSPWVPTPSAPLHHPMLLSR*NQRTVR
Trigger: TCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCAT...TGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCAGTTGTGTACCGTGGGTaGGTGGAGATTGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: ELHWPPLGPSLSQSSPQSVVYRG*VEIDLG
Trigger: ACCGAGGTCAATCTCCACCCACCCACGGTACACAAC...TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCTTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: GTVKGVLGSPLLQRLFTIFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...GATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTTGTCTGCCTGAGCTTCACTaGCCCCCGCTGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: ARAPGIQPGTQRECGTSCLPELH*PPLGPS
Trigger: AGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG...ACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp TTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGATGGCCGCTTTGCCCTaGAACCTGTACCAGACCACG +
Preference number: 4 (lower is better)
Translates to: FHRAKGLPGLEVHHFLGMMAALP*NLYQTT
Trigger: CGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCCAT...CATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp AGCACGGGTACCCCTCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAATCACTTCCTGGGGATaGGACTGCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: STGTPLRRKGMWSSSTEPITSWG*DCSRFK
Trigger: TTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGAT...TGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCAGGAGGGAAAGCCAATaGACAGCGTTTGATCATGGA +
Preference number: 4 (lower is better)
Translates to: HPRQILPELHWPPLGPSLRRESQ*TAFDHG
Trigger: TCCATGATCAAACGCTGTTCATTGGCTTTCCCTCCT...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp TCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGGCTCCCCGGGAGGAGGGAAAGCCAATaGACAGCGTTTGATCATGGA +
Preference number: 4 (lower is better)
Translates to: SAEEGDVVVFHRAKGLPGRRESQ*TAFDHG
Trigger: TCCATGATCAAACGCTGTTCATTGGCTTTCCCTCCT...CCCGGGGAGCCCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp AACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCATGGACGGGGACTTTCTaGCTTGGAGATTTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: NRKGSPWVPTPSAPLHHPWTGTF*LGDFPG
Trigger: GCCCGGGAAATCTCCAAGTCAGAAAGTCCCCGTCCA...TGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR GCA 90 bp ACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTTTCCTCAGTCCTGCGGTaGCAGCCGCTCCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: TLEPQVFSQEHSENAAQVSSVLR*QPLQMV
Trigger: CACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGA...AACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGAGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: HRAKGLPGLEVHHFLGMRGGADK*SRDAVD
Trigger: ATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCC...TCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 4 (lower is better)
Translates to: WSLQTFGPSVYLWGGSKFGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...GAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp ATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTGTGTCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IKKHKELNSLDPGGAGAVSKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...CACAGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp ATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTGGAACACAGCGAGAATaGGGCACAAGTTGTGTACCG +
Preference number: 4 (lower is better)
Translates to: ILPELHWPPLGPSLSQSSGTQRE*GTSCVP
Trigger: CGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCC...AGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAACAGTATTTGGTCCCTaGAAACCTTTGGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: DPVVPPPSAAGLRGGFRSTVFGP*KPLDQV
Trigger: CACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT...TGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AGGTATGAAAAGGACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACGGCCCCCGGAACGCATaGCCGCTTTGCCCTGAAACC +
Preference number: 4 (lower is better)
Translates to: RYEKDKPAHPRQILPELHGPRNA*PLCPET
Trigger: GGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCC...GTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: NRKGSPWVPTPSAPLHHPAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...TGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp ACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: TVKGVLGSPLLQRLFTIQAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...TTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCGCACAGCCGAATCCGTaGCCCCTACAAAGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: WSLQTFGPSVYLWGGSKFAQPNP*PLQRGS
Trigger: CGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGC...GAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGCGTAAAGGGAGTCCTTaGGTCCCCACTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: FHRAKGLPGLEVHHFLGMRKGSP*VPTPSA
Trigger: CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACG...CATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTGTGATAGACTCCATGAGCTaGGCCAGGTGCCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: IKKHKELNSLDPGGAGAVIDSMS*ARCREP
Trigger: CGGTTCCCGGCACCTGGCCCAGCTCATGGAGTCTAT...CACAGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAATGCTCCTCAGCCGATaGAACCAGCGGACCGTGCGA +
Preference number: 4 (lower is better)
Translates to: VKGVLGSPLLQRLFTIQEMLLSR*NQRTVR
Trigger: TCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCAT...TTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGAAGGGCTCCCCGGGTTaGAAGTACATCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQSQRAPRVGSTSLPGDEKGSPG*KYITSW
Trigger: CCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTT...CTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGAAGGGCTCCCCGGGTTaGAAGTACATCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQKGSPG*KYITSW
Trigger: CCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTT...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCCCTCTCCACAGTCATTaGCCAAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: HSHWPSTLEPQVFSQEHSPLHSH*PSTLEP
Trigger: GGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGG...GCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCCCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: QVPGTVKGVLGSPLLQRLPSVYL*GGSKFL
Trigger: TAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGG...GAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CCGTGCGAGGGAAGTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGATCAATCCCCATGGAATCGGTaGGCCAATAAGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: PCEGSGCRRWDWGLPGDQSPWNR*ANKQQL
Trigger: CAGCTGTTGCTTATTGGCCCACCGATTCCATGGGGA...TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTAAGCCACGTCAACCCTaGGTAACAGCGGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: KGGRSGWEELRVIMAGKGKPRQP*VTAGRE
Trigger: TTCCCTCCCCGCTGTTACCCAGGGTTGACGTGGCTT...ACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp GTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAATGGCCGCTTTGCCCTaGAACCTGTACCAGACCACG +
Preference number: 4 (lower is better)
Translates to: VKGVLGSPLLQRLFTIQEMAALP*NLYQTT
Trigger: CGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCCAT...TTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp GAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCAATCACTTCCTGGGGATaGGACTGCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ELHWPPLGPSLSQSSPQSITSWG*DCSRFK
Trigger: TTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGAT...TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AGGTATGAAAAGGACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 4 (lower is better)
Translates to: RYEKDKPAHPRQILPELHGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...GTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCGGAACCAGCGGACCGTaGGAGGGAAGTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: WSLQTFGPSVYLWGGSKFGTSGP*EGSGCR
Trigger: TCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCC...GAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCAAGCAGGTTCAAACGGTaGAGACGCTTCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: ELHWPPLGPSLSQSSPQSSRFKR*RRFSML
Trigger: GAGCATTGAGAAGCGTCTGCACCGTTTGAACCTGCT...TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGTGTCCGCAGGGGTGTaGCAGACAGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGVSAGV*QTAGKG
Trigger: GCCCTTCCCTGCTGTCTGGCACACCCCTGCGGACAC...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CTGGGGAGGGAGCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCAGGAGGCGGAGTTTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: LGREQVLIPLAVIPQWSLPGGGV*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAAACTCCGCCTCCTGG...AAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGACCTCCCCTTGGGTCCAGTGTaGCCACCACATTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: HSENAAQVVYRGWVEIDLPLGPV*PPHCQS
Trigger: ACTTTGGCAATGTGGTGGCCACACTGGACCCAAGGG...GAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTGACGGGCAGCCCTTaGGTCCAGTGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: YLVPANLWTKCLPLGREQVTGSP*VQCGHH
Trigger: GTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCAC...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GAGATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTCGTAAAGGGAGTCCTTaGGTCCCCACTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: EIKKHKELNSLDPGGAGARKGSP*VPTPSA
Trigger: CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACG...AGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCATAGACTCCATGAGCTaGGCCAGGTGCCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: WSLQTFGPSVYLWGGSKFIDSMS*ARCREP
Trigger: CGGTTCCCGGCACCTGGCCCAGCTCATGGAGTCTAT...GAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGTGTAGAAGGTGGGATTaGGGGCTCCCAGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: WPSTLEPQVFSQEHSENACRRWD*GLPGDQ
Trigger: TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACA...CGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGATCAAGAAGCATAAAGAGGGCGTGGAGATGAGATaGAGCACGGGTACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VAVEGGIGGSQEIKKHKEGVEMR*STGTPL
Trigger: CAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCC...CTCTTTATGCTTCTTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTTGTTGTACCGTGGGTGGGTaGAGATTGACCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ARAPGIQPGTQRECGTSCCTVGG*RLTSVS
Trigger: GGACACCGAGGTCAATCTCCACCCACCCACGGTACA...ACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTTTTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: TLEPQVFSQEHSENAAQVFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...AACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 4 (lower is better)
Translates to: AGNRKGSPWVPTPSAPLHPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...GTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TGCAGACGCTTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGCCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 4 (lower is better)
Translates to: CRRFSMLLSRWNQRTVRGPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...CCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CATGAGCTGGGCCAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: HELGQVPGTVKGVLGSPLKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...GAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCCAGCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: SCLSFTGPRWDLLSHSPLPSVYL*GGSKFL
Trigger: TAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGG...GAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGCACAGCCGAATCCGTaGCCCCTTTCTGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: VKGVLGSPLLQRLFTIQEAQPNP*PLSDLE
Trigger: CTCCAAGTCAGAAAGGGGCCACGGATTCGGCTGTGC...TTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591606.1
CDS-3UTR CCA 90 bp CCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGTCCCCATGGAATCGGTaGGCCAATAAGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: PLQRGSIRVGRASSHNGRSPWNR*ANKQQL
Trigger: CAGCTGTTGCTTATTGGCCCACCGATTCCATGGGGA...CCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCCAAGTTCCTCCCCATaGAATCGGTGGGCCAATAAG +
Preference number: 4 (lower is better)
Translates to: GTVKGVLGSPLLQRLFTIPSSSP*NRWANK
Trigger: CTTATTGGCCCACCGATTCCATGGGGAGGAACTTGG...GATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
3UTR CAA 72 bp CTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATaGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGPSLSQSSPQS*AKHARAPGIQP
Trigger: TGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCAATCACTTCCTGGGGATaGGACTGCAGCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: GSPWVPTPSAPLHHPRRAITSWG*DCSRFK
Trigger: TTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGAT...TGCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp CACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAGGAAGGGCGTGGAGATaGGATGGAGCACGGGTACCC +
Preference number: 4 (lower is better)
Translates to: HSGLFPVLEGWQLETIKRGRAWR*DGARVP
Trigger: GGGTACCCGTGCTCCATCTCATCTCCACGCCCTTCC...TCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTGGGTGGGTGGAGATTaGCCTCGGTGTCCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSWVGGD*PRCPQG
Trigger: CCCCTGCGGACACCGAGGTCAATCTCCACCCACCCA...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CTGGGGAGGGAGCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCTCCTGCGTACAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGREQVLIPLAVIPQWSLPPAYK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTGTACGCAGGAGG...AAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGACCGGGGCTGCCTTTCTaGCTTGGAGATTTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGPGLPF*LGDFPG
Trigger: GCCCGGGAAATCTCCAAGTCAGAAAGGCAGCCCCGG...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366382.8
CDS-3UTR TCA 90 bp TTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGAGGAGGGAAAGCCAATaGACAGCGTTTGATCATGGA +
Preference number: 4 (lower is better)
Translates to: FSMLLSRWNQRTVRGKWLRRESQ*TAFDHG
Trigger: TCCATGATCAAACGCTGTTCATTGGCTTTCCCTCCT...CAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAACGCATGGCCGCTTTaGCCTGAAACCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: FHRAKGLPGLEVHHFLGMNAWPL*PETCTR
Trigger: TCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTT...CATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGGGAACCAGCGGACCGTaGGAGGGAAGTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLGTSGP*EGSGCR
Trigger: TCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCC...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp CACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAGCACGGGTACCCCTCTaGGGAGGAAGGGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: HSGLFPVLEGWQLETIKRARVPL*GGRGCG
Trigger: ACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGC...TCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACACAGTATTTGGTCCCTaGAAACCTTTGGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: CLSFTGPRWDLLSHSPLHTVFGP*KPLDQV
Trigger: CACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT...GTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCAAGGCGCCCACCACCATaGCCAGCTAATTATTGTATT +
Preference number: 4 (lower is better)
Translates to: ELHWPPLGPSLSQSSPQSRRPPP*PANYCI
Trigger: AATACAATAATTAGCTGGGCATGGTGGTGGGCGCCT...TGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCAGCAACAGCTGCGGCTaGACCAGCCCACCCCACAGC +
Preference number: 4 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSSNSCG*TSPPHS
Trigger: GCTGTGGGGTGGGCTGGTGCAGCCGCAGCTGTTGCT...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGGGCCCCCGGAACGCATaGCCGCTTTGCCCTGAAACC +
Preference number: 4 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLGPRNA*PLCPET
Trigger: GGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCC...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTAGGAACTTTCTGACTTaGAGATTTCCCGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KGGRSGWEELRVIMAGKGRNFLT*RFPGLP
Trigger: GGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCT...ACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677542.1
CDS-3UTR CCA 90 bp CTGGGGAGGGAGCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTGGGGGTCGATCCGGGTaGGAAGAGCTTCGAGTCATA +
Preference number: 4 (lower is better)
Translates to: LGREQVLIPLAVIPQWSLGGRSG*EELRVI
Trigger: TATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC...AAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AGGTATGAAAAGGACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACATAGACTCCATGAGCTaGGCCAGGTGCCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: RYEKDKPAHPRQILPELHIDSMS*ARCREP
Trigger: CGGTTCCCGGCACCTGGCCCAGCTCATGGAGTCTAT...GTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGATGCTCCTCAGCCGATaGAACCAGCGGACCGTGCGA +
Preference number: 4 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLMLLSR*NQRTVR
Trigger: TCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCAT...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AGGAACACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGAAGGGCTCCCCGGGTTaGAAGTACATCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RNTARMRHKLCTVGGWRLKGSPG*KYITSW
Trigger: CCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTT...CAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 4 (lower is better)
Translates to: ILPELHWPPLGPSLSQSSPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...AGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: GRSCLSFTGPRWDLLSHSKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGACCTCATGGCACGACCCAAATaGGAGCGCAAGAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: HSENAAQVVYRGWVEIDLMARPK*ERKRSR
Trigger: CCTACTTCTCTTGCGCTCCCATTTGGGTCGTGCCAT...GAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
3UTR CAA 72 bp TATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTaGTGTACCGTGGGTGGGTGGAGATTGACCTCGGTG +
Preference number: 4 (lower is better)
Translates to: YSARNTARMRHK*CTVGGWRLTSV
Trigger: CACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTGGCCCCAGGGGTGTTaGGGCTGTGAAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSWPQGC*GCEGIQ
Trigger: CTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCA...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp TTACTTTTTCAGTTCGCTGACTTAAAGAACAGCATTTTGCCAGGTGCGGTGGCTCAGGCAAGGGTGAGGTaGCGGGCAGCCCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLFQFADLKNSILPGAVAQARVR*RAALGS
Trigger: GGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTG...AGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEVGPGL*GIDSMS
Trigger: GCTCATGGAGTCTATACCTCACAGCCCCGGCCCCAC...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAGGAAGGGCGTGGAGATaGGATGGAGCACGGGTACCC +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEGRAWR*DGARVP
Trigger: GGGTACCCGTGCTCCATCTCATCTCCACGCCCTTCC...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAAGCAGCTCCTCAGTCCTaGGGTGCCAGCCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KFLFLWLSSHSGLFPVLEAAPQS*GASRSK
Trigger: TTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGC...TTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTAGCAGGTTCAAACGGTaGAGACGCTTCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: KGGRSGWEELRVIMAGKGSRFKR*RRFSML
Trigger: GAGCATTGAGAAGCGTCTGCACCGTTTGAACCTGCT...ACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCGCACGGGTACCCCTCTaGGGAGGAAGGGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: SLSLKGGSLRQSKERRSSARVPL*GGRGCG
Trigger: ACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGC...GGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGTGTCCGCAGGGGTGTaGCAGACAGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KPLDQVFTSGEGASSYSSVSAGV*QTAGKG
Trigger: GCCCTTCCCTGCTGTCTGGCACACCCCTGCGGACAC...AGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTAGCAACAGCTGCGGCTaGACCAGCCCACCCCACAGC +
Preference number: 4 (lower is better)
Translates to: KPLDQVFTSGEGASSYSSSNSCG*TSPPHS
Trigger: GCTGTGGGGTGGGCTGGTGCAGCCGCAGCTGTTGCT...AGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TCCTCTCCACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAAAAGGAAGCTACTGTTaGAGAACCAGCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SSPQSLAKHARAPGIQPGKGSYC*RTSPKP
Trigger: AGGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTT...TCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp CACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGACTTCGGCGGCAAGAGTaGCTCCATGAGGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: HSGLFPVLEGWQLETIKRLRRQE*LHEATF
Trigger: GAACGTGGCCTCATGGAGCCACTCTTGCCGCCGAAG...TCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGGCACAGCCGAATCCGTaGCCCCTACAAAGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLAQPNP*PLQRGS
Trigger: CGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGC...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGTTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCCCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: RESLGPHSFSASSPSKKSPSVYL*GGSKFL
Trigger: TAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGG...GCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp TACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGCCAAGTTCCTCCCCATaGAATCGGTGGGCCAATAAG +
Preference number: 4 (lower is better)
Translates to: YKGGRSGWEELRVIMAGKPSSSP*NRWANK
Trigger: CTTATTGGCCCACCGATTCCATGGGGAGGAACTTGG...CTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp AAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAAGGGGTGTTGAGGCTGTaGAGGGATCCAGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: KFLFLWLSSHSGLFPVLEGVLRL*RDPAPR
Trigger: ACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCC...TTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp TTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCGGAAGGGCGTGGAGATaGGATGGAGCACGGGTACCC +
Preference number: 4 (lower is better)
Translates to: FPVLEGWQLETIKRKKVFGRAWR*DGARVP
Trigger: GGGTACCCGTGCTCCATCTCATCTCCACGCCCTTCC...GAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGGCAGGAGAATGGCGTaGACCCAGGAGGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKGRRMA*TQEAEF
Trigger: AAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCC...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAGGCAGGAGAATGGCGTaGACCCAGGAGGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEGRRMA*TQEAEF
Trigger: AAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCC...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp TCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAATCCAATGAACAGCGTTTaGTCATGGAAAATATTCGAT +
Preference number: 4 (lower is better)
Translates to: SSCPTTLRSRASGRLPINPMNSV*SWKIFD
Trigger: ATCGAATATTTTCCATGATCAAACGCTGTTCATTGG...ATTGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCCTCAGTCCTGCGGTaGCAGCCGCTCCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSSSVLR*QPLQMV
Trigger: CACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGA...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: YLVPANLWTKCLPLGREQGGADK*SRDAVD
Trigger: ATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCC...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTCTCCACGTGCCAACCTaGTGTCAGGGACCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: KPLDQVFTSGEGASSYSSLHVPT*CQGPQR
Trigger: ACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAG...AGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAACAGCTCCAGGTCAAGTaGTTGGGCCAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEQLQVK*LGQLQQ
Trigger: CTGCTGGAGCTGGCCCAAGCACTTGACCTGGAGCTG...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCCAGCTCCAGGTCAAGTaGTTGGGCCAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLSLKGGSLRQSKERRSSQLQVK*LGQLQQ
Trigger: CTGCTGGAGCTGGCCCAAGCACTTGACCTGGAGCTG...GGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGATCCAAGAAGAGCAGTTaGAGGGTCACCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VVSSLSLKGGSLRQSKERSKKSS*RVTGAA
Trigger: GGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGA...TCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKTLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCCCAGGAGGCGGAGTTTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: SLSLKGGSLRQSKERRSSPGGGV*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAAACTCCGCCTCCTGG...GGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGCTTCGGCGGCAAGAGTaGCTCCATGAGGCCACGTTC +
Preference number: 4 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLLRRQE*LHEATF
Trigger: GAACGTGGCCTCATGGAGCCACTCTTGCCGCCGAAG...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAGCCAGCCGCTCCAAATaGTGTAGAACGCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEASRSK*CRTPSP
Trigger: TGGGCTCGGCGTTCTACACCATTTGGAGCGGCTGGC...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCGCACAGCCGAATCCGTaGCCCCTACAAAGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: FPVLEGWQLETIKRKKVFAQPNP*PLQRGS
Trigger: CGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGC...GAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGATAGACTCCATGAGCTaGGCCAGGTGCCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKIDSMS*ARCREP
Trigger: CGGTTCCCGGCACCTGGCCCAGCTCATGGAGTCTAT...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAATAGACTCCATGAGCTaGGCCAGGTGCCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEIDSMS*ARCREP
Trigger: CGGTTCCCGGCACCTGGCCCAGCTCATGGAGTCTAT...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGATGCTCCTCAGCCGATaGAACCAGCGGACCGTGCGA +
Preference number: 4 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKMLLSR*NQRTVR
Trigger: TCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCAT...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAAGGGCTCCCCGGGTTaGAAGTACATCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLKGSPG*KYITSW
Trigger: CCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTT...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCGGCGTGGAGATGAGATaGAGCACGGGTACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSGVEMR*STGTPL
Trigger: CAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCC...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAATGGCCGCTTTGCCCTaGAACCTGTACCAGACCACG +
Preference number: 4 (lower is better)
Translates to: VVSSLSLKGGSLRQSKERMAALP*NLYQTT
Trigger: CGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCCAT...TCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
CDS-3UTR TCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAACCTCCTGCGTACAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEPPAYK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTGTACGCAGGAGG...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TTACTTTTTCAGTTCGCTGACTTAAAGAACAGCATTTTGCCAGGTGCGGTGGCTGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 4 (lower is better)
Translates to: LLFQFADLKNSILPGAVAGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...AGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TTACTTTTTCAGTTCGCTGACTTAAAGAACAGCATTTTGCCAGGTGCGGTGGCTCTCCACGTGCCAACCTaGTGTCAGGGACCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LLFQFADLKNSILPGAVALHVPT*CQGPQR
Trigger: ACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAG...AGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAGACGCTTCTCAATaGTCCTCAGCCGATGGAACC +
Preference number: 4 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGADASQ*SSADGT
Trigger: GGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGC...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGGGAACACAGCGAGAATaGGGCACAAGTTGTGTACCG +
Preference number: 4 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLGTQRE*GTSCVP
Trigger: CGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCC...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCCAGGAGGCGGAGTTTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: FPVLEGWQLETIKRKKVFPGGGV*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAAACTCCGCCTCCTGG...GAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: VVSSLSLKGGSLRQSKERAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...TCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAGGGGGTCGATCCGGGTaGGAAGAGCTTCGAGTCATA +
Preference number: 4 (lower is better)
Translates to: VVSSLSLKGGSLRQSKERGGRSG*EELRVI
Trigger: TATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC...TCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCTCCAGGTCAAGTGCTTaGGCCAGCTCCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FPVLEGWQLETIKRKKVFSRSSA*ASSSSR
Trigger: CCTGCTGCTGGAGCTGGCCCAAGCACTTGACCTGGA...GAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGTGTAGAAGGTGGGATTaGGGGCTCCCAGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLCRRWD*GLPGDQ
Trigger: TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACA...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AGGTATGAAAAGGACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGTAGAAGGTGGGATTaGGGGCTCCCAGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: RYEKDKPAHPRQILPELHCRRWD*GLPGDQ
Trigger: TTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACA...GTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAACCTCTCCACAGTCATTaGCCAAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KFLFLWLSSHSGLFPVLEPLHSH*PSTLEP
Trigger: GGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGG...TTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAATTCACTGGCCCCCGCTaGGACCTTCTCTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEFTGPR*DLLSHS
Trigger: ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAA...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CCACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: PQSLAKHARAPGIQPGTQKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...CTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGCCTCCAGGAACTTTCTaGCTTGGAGATTTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKPPGTF*LGDFPG
Trigger: GCCCGGGAAATCTCCAAGTCAGAAAGTTCCTGGAGG...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678862.1
CDS-3UTR TCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTGGGGTTGGTTCCCCTaGGAATGGCACGACCCAAAT +
Preference number: 4 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSWGWFP*EWHDPN
Trigger: ATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCA...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAAACGCATGGCCGCTTTaGCCTGAAACCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGNAWPL*PETCTR
Trigger: TCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTT...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AGGTATGAAAAGGACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACAGCAGGTTCAAACGGTaGAGACGCTTCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: RYEKDKPAHPRQILPELHSRFKR*RRFSML
Trigger: GAGCATTGAGAAGCGTCTGCACCGTTTGAACCTGCT...GTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGACAGTATTTGGTCCCTaGAAACCTTTGGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: YSARNTARMRHKLCTVGGTVFGP*KPLDQV
Trigger: CACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT...CCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TTACTTTTTCAGTTCGCTGACTTAAAGAACAGCATTTTGCCAGGTGCGGTGGCTGCCAGCCGCTCCAAATaGTGTAGAACGCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLFQFADLKNSILPGAVAASRSK*CRTPSP
Trigger: TGGGCTCGGCGTTCTACACCATTTGGAGCGGCTGGC...AGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAACCCTTGGGTCCAGTGTaGCCACCACATTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KFLFLWLSSHSGLFPVLEPLGPV*PPHCQS
Trigger: ACTTTGGCAATGTGGTGGCCACACTGGACCCAAGGG...TTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTTGTGTACCGTGGGTaGGTGGAGATTGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKVVYRG*VEIDLG
Trigger: ACCGAGGTCAATCTCCACCCACCCACGGTACACAAC...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGCGAGAATGCGGCACAAGTTAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: TLEPQVFSQEHSENAAQVKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...AACTTGTGCCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp AGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCCCAATGAACAGCGTTTaGTCATGGAAAATATTCGAT +
Preference number: 4 (lower is better)
Translates to: RESLGPHSFSASSPSKKSPMNSV*SWKIFD
Trigger: ATCGAATATTTTCCATGATCAAACGCTGTTCATTGG...GCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TCAATGGGACCTTTCCTCTTAAAAGGAAGCTACTGTTGCAGAACCAGCCCGAAGAACGCATGGCCGCTTTaGCCTGAAACCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: SMGPFLLKGSYCCRTSPKNAWPL*PETCTR
Trigger: TCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTT...CTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTTAAGAGGAAAGGTCCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000677542.1
CDS-3UTR GCA 90 bp AAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGCAGACGCTTCTCAATaGTCCTCAGCCGATGGAACC +
Preference number: 4 (lower is better)
Translates to: KPLDQVFTSGEGASSYSSADASQ*SSADGT
Trigger: GGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGC...AGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp ATCAATGGGACCTTTCCTCTTAAAAGGAAGCTACTGTTGCAGAACCAGCCCGAAGCAGACGCTTCTCAATaGTCCTCAGCCGATGGAACC +
Preference number: 4 (lower is better)
Translates to: INGTFPLKRKLLLQNQPEADASQ*SSADGT
Trigger: GGTTCCATCGGCTGAGGAGCATTGAGAAGCGTCTGC...TTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTTAAGAGGAAAGGTCCCATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000677542.1
CDS-3UTR GCA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAAGCAGGTTCAAACGGTaGAGACGCTTCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGSRFKR*RRFSML
Trigger: GAGCATTGAGAAGCGTCTGCACCGTTTGAACCTGCT...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGCCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 4 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATTGAAAAAGAACAGTATTTaGTCCCTGCAAACCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LHWPPLGPSLSQSSPQSLKKNSI*SLQTFG
Trigger: TCCAAAGGTTTGCAGGGACCAAATACTGTTCTTTTT...CAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CAATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATCAGGCAAGGGTGAGGTaGCGGGCAGCCCTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QSKERRSSNCSTIRRQRYQARVR*RAALGS
Trigger: GGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTG...ATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCGGAACACAGCGAGAATaGGGCACAAGTTGTGTACCG +
Preference number: 4 (lower is better)
Translates to: FPVLEGWQLETIKRKKVFGTQRE*GTSCVP
Trigger: CGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCC...GAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp TTCCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAAAAAGAACAGTATTTaGTCCCTGCAAACCTTTGGA +
Preference number: 4 (lower is better)
Translates to: FHRAKGLPGLEVHHFLGMKKNSI*SLQTFG
Trigger: TCCAAAGGTTTGCAGGGACCAAATACTGTTCTTTTT...CATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGACCTCAAAAAGAACAGTATTTaGTCCCTGCAAACCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HSENAAQVVYRGWVEIDLKKNSI*SLQTFG
Trigger: TCCAAAGGTTTGCAGGGACCAAATACTGTTCTTTTT...GAGGTCAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TTACTTTTTCAGTTCGCTGACTTAAAGAACAGCATTTTGCCAGGTGCGGTGGCTGGAACACAGCGAGAATaGGGCACAAGTTGTGTACCG +
Preference number: 4 (lower is better)
Translates to: LLFQFADLKNSILPGAVAGTQRE*GTSCVP
Trigger: CGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCC...AGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGAGGCGCCCACCACCATaGCCAGCTAATTATTGTATT +
Preference number: 4 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKRRPPP*PANYCI
Trigger: AATACAATAATTAGCTGGGCATGGTGGTGGGCGCCT...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAACCTGTCCTTGAAGGGTaGCAGCTTGAGACAATCAAA +
Preference number: 4 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEPVLEG*QLETIK
Trigger: TTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGG...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGCCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLPSVYL*GGSKFL
Trigger: TAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGG...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp CAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAAGGAAGGGCGTGGAGATaGGATGGAGCACGGGTACCC +
Preference number: 4 (lower is better)
Translates to: QKKEGLPIVAQLGDKGMKGRAWR*DGARVP
Trigger: GGGTACCCGTGCTCCATCTCATCTCCACGCCCTTCC...TTTCATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGGGAGATTTCCCGGGCTaGCCGGGGTTCGCACAACCA +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMGDFPG*PGFAQP
Trigger: TGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCC...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TTACTTTTTCAGTTCGCTGACTTAAAGAACAGCATTTTGCCAGGTGCGGTGGCTAGCAGGTTCAAACGGTaGAGACGCTTCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: LLFQFADLKNSILPGAVASRFKR*RRFSML
Trigger: GAGCATTGAGAAGCGTCTGCACCGTTTGAACCTGCT...AGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR GCA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCACAGTATTTGGTCCCTaGAAACCTTTGGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSTVFGP*KPLDQV
Trigger: CACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp TCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCACAGTATTTGGTCCCTaGAAACCTTTGGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: SLSLKGGSLRQSKERRSSTVFGP*KPLDQV
Trigger: CACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT...GGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTAGGCGCCCACCACCATaGCCAGCTAATTATTGTATT +
Preference number: 4 (lower is better)
Translates to: KPLDQVFTSGEGASSYSSRRPPP*PANYCI
Trigger: AATACAATAATTAGCTGGGCATGGTGGTGGGCGCCT...AGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CTGGGGAGGGAGCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTAAAAAGAACAGTATTTaGTCCCTGCAAACCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LGREQVLIPLAVIPQWSLKKNSI*SLQTFG
Trigger: TCCAAAGGTTTGCAGGGACCAAATACTGTTCTTTTT...AAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp CAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAAACCCTAGGCAGATCCTaGCTGAGCTTCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QKKEGLPIVAQLGDKGMKTLGRS*LSFTGP
Trigger: GGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGT...TTTCATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAAAGGCGTAAAGGGAGTCCTTaGGTCCCCACTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: KKEGLPIVAQLGDKGMKRRKGSP*VPTPSA
Trigger: CGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACG...CCTTTTCATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMKSSIA*ILVGPG
Trigger: CCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGGGCGTGGAGATGAGATaGAGCACGGGTACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMGVEMR*STGTPL
Trigger: CAGAGGGGTACCCGTGCTCCATCTCATCTCCACGCC...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGGGGGGCGCAGATAAGTaGTCCAGAGACGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMGGADK*SRDAVD
Trigger: ATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCC...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGGTGATCTTGGCTCACTaGAACCTCCGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMVILAH*NLRLLR
Trigger: ACGCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCAC...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CAATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGCTCCAGAGACGCTGTaGATCCAGTTGTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: QSKERRSSNCSTIRRQRYAPETL*IQLSHH
Trigger: GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGC...ATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAATGTACCGTGGGTGGGTaGAGATTGACCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QKKEGLPIVAQLGDKGMKCTVGG*RLTSVS
Trigger: GGACACCGAGGTCAATCTCCACCCACCCACGGTACA...TTTCATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CAATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATTGTACCGTGGGTGGGTaGAGATTGACCTCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QSKERRSSNCSTIRRQRYCTVGG*RLTSVS
Trigger: GGACACCGAGGTCAATCTCCACCCACCCACGGTACA...ATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGCCTCTCCACAGTCATTaGCCAAGCACGCTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMPLHSH*PSTLEP
Trigger: GGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGG...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR GCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGCAGGGTCACCGGGGCTaGCTTTCTGACTTGGAGATT +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMQGHRG*LSDLEI
Trigger: AATCTCCAAGTCAGAAAGGCAGCCCCGGTGACCCTG...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366382.8
CDS-3UTR CCA 90 bp CAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAACCCTTGGGTCCAGTGTaGCCACCACATTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QKKEGLPIVAQLGDKGMKPLGPV*PPHCQS
Trigger: ACTTTGGCAATGTGGTGGCCACACTGGACCCAAGGG...TTTCATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp CAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAAAAGGGCTCCCCGGGTTaGAAGTACATCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QKKEGLPIVAQLGDKGMKKGSPG*KYITSW
Trigger: CCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTT...TTTCATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAAAAAAAGAACAGTATTTaGTCCCTGCAAACCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KFLFLWLSSHSGLFPVLEKKNSI*SLQTFG
Trigger: TCCAAAGGTTTGCAGGGACCAAATACTGTTCTTTTT...TTCAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR TCA 90 bp ATCAATGGGACCTTTCCTCTTAAAAGGAAGCTACTGTTGCAGAACCAGCCCGAACCAATGAACAGCGTTTaGTCATGGAAAATATTCGAT +
Preference number: 4 (lower is better)
Translates to: INGTFPLKRKLLLQNQPEPMNSV*SWKIFD
Trigger: ATCGAATATTTTCCATGATCAAACGCTGTTCATTGG...TTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTTAAGAGGAAAGGTCCCATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000677542.1
CDS-3UTR CCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGGAGGCTTCCGATCAATaGGACCTCAAACTTGATGGG +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMEASDQ*DLKLDG
Trigger: CCCATCAAGTTTGAGGTCCCATTGATCGGAAGCCTC...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678102.1
CDS-3UTR CCA 90 bp CAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAACCAAGTGTTTACCTCTaGGGAGGGAGCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: QKKEGLPIVAQLGDKGMKPSVYL*GGSKFL
Trigger: TAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGG...TTTCATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CCA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAGTTCTTATTCCTCTaGCTGTCATCCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMKFLFL*LSSHSG
Trigger: ACCACTGTGGGATGACAGCCAGAGGAATAAGAACTT...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS TCA 90 bp GAACCCGCGGTAGCAGGCGGCGCTTCGGCGGCAAGAGTGGCTCCATaGGGCCACGTTCCCCCAGCCGCAGGCGGGGTCGCCCGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: EPAVAGGASAARVAP*GHVPPAAGGVARGP
Trigger: GGGGCCGCGGGCGACCCCGCCTGCGGCTGGGGGAACGTGGCCTCATGGAGCCACTCTTGCCGCCGAAGCGCCGCCTGCTACCGCGGGTTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS GCA 90 bp GCCGCAGGCGGGGTCGCCCGCGGCCCCCGGAACGCATGGCCGCTTTaGCCTGAAACCTGTACCAGACCACGGATTGAGTTTAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AAGGVARGPRNAWPL*PETCTRPRIEFRPS
Trigger: GCTGGGCCTAAACTCAATCCGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCCGCGGGCGACCCCGCCTGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCGGTGACGGGCAGCCCTaGGGTCCAGTGTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: VKGSSSTCQPAVRDRSVAGDGQP*GPVWPP
Trigger: TGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACC...GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CAGCAGGGCACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGTGGGTGGGTGGAGATaGACCTCGGTGTCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: QQGTGHSRIRGPYKGGRSVGGWR*TSVSAG
Trigger: CCCTGCGGACACCGAGGTCAATCTCCACCCACCCAC...GGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAGGTGACGGGCAGCCCTaGGGTCCAGTGTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPGDGQP*GPVWPP
Trigger: TGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACC...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: QVPGTVKGVLGSPLLQRLTLWIQ*SHHPPQ
Trigger: CTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGT...GAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp TCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTGGCCTCCAGGAACAGTGTGGCCACCACATaGCCAAAGTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: SSSTCQPAVRDRSVASRNSVATT*PKSTGP
Trigger: GGGGCCAGTGGACTTTGGCAATGTGGTGGCCACACT...GTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp AGCAGCAGGGCACAGGGCACAGCCGAATCCGTGGCCCCTACAAAGGGGGTCGATGGGGCTGCCTGTTTTTaGGCCCTGCTCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSRAQGTAESVAPTKGVDGAACF*ALLSSR
Trigger: CCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCC...ATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CATGAGCTGGGCCAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCGGGGCTGCCTGTTTTTaGGCCCTGCTCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HELGQVPGTVKGVLGSPLGAACF*ALLSSR
Trigger: CCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCC...GAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCCAGCTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGTGGGTGGGTGGAGATaGACCTCGGTGTCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: DKPAHPRQILPELHWPPLVGGWR*TSVSAG
Trigger: CCCTGCGGACACCGAGGTCAATCTCCACCCACCCAC...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCAGTGGGTGGGTGGAGATaGACCTCGGTGTCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: LPELHWPPLGPSLSQSSPVGGWR*TSVSAG
Trigger: CCCTGCGGACACCGAGGTCAATCTCCACCCACCCAC...TGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCGTGGGTGGGTGGAGATaGACCTCGGTGTCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: SCLSFTGPRWDLLSHSPLVGGWR*TSVSAG
Trigger: CCCTGCGGACACCGAGGTCAATCTCCACCCACCCAC...GAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: DKPAHPRQILPELHWPPLTLWIQ*SHHPPQ
Trigger: CTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGT...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CCACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGGGTGACGGGCAGCCCTaGGGTCCAGTGTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: PQSQRAPRVGSTSLPGDEGDGQP*GPVWPP
Trigger: TGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACC...CTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCGGGGCTGCCTGTTTTTaGGCCCTGCTCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SCLSFTGPRWDLLSHSPLGAACF*ALLSSR
Trigger: CCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCC...GAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TACCGTGGGTGGGTGGAGATTGACCTCGGTGTCCGCAGGGGTGTGCCAGACAGCATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: YRGWVEIDLGVRRGVPDSIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...GCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAATGGGACCTTTCCTCCTCTCCACAGTCATaGGCCAAGCACGCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: HHPPQPGFGEASDQWDLSSSPQS*AKHARA
Trigger: GGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGA...GGAAAGGTCCCATTGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677542.1
CDS-3UTR CAA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCGGCTGCCTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HPRQILPELHWPPLGPSLGCLSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGGCAGCC...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366382.8
CDS-3UTR CAA 90 bp GGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GRSCLSFTGPRWDLLSHSIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGAAAGGGCTCCCCGGGTaGGAAGTACATCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: SRDAVDPVVPPPSAAGLRKGLPG*EVHHFL
Trigger: CAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTT...CCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp TCTGCGGAGGAAGGGGATGTGGTCGTCTTCCACAGAGCCAAAGGGCTCCCCGGGAGAATGCGGCACAAGTaGTGTACCGTGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SAEEGDVVVFHRAKGLPGRMRHK*CTVGGW
Trigger: CCACCCACCCACGGTACACAACTTGTGCCGCATTCT...CCCGGGGAGCCCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp GCTGCCCGGGGTTCGCACAACCAGCAGGGGGCGCAGATAAGTGCTCCAGAGACGGTACCAGACCACGGATaGAGTTTAGGCCCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: AARGSHNQQGAQISAPETVPDHG*SLGPAK
Trigger: CTTGGCTGGGCCTAAACTCAATCCGTGGTCTGGTAC...CGTCTCTGGAGCACTTATCTGCGCCCCCTGCTGGTTGTGCGAACCCCGGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp TACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGCAAGGGTGACGGGCAGCCCTaGGGTCCAGTGTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: YKGGRSGWEELRVIMAGKGDGQP*GPVWPP
Trigger: TGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACC...CTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp AGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCGGGGCTGCCTGTTTTTaGGCCCTGCTCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RESLGPHSFSASSPSKKSGAACF*ALLSSR
Trigger: CCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCC...GCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCAAAGGGCTCCCCGGGTaGGAAGTACATCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: HPRQILPELHWPPLGPSLKGLPG*EVHHFL
Trigger: CAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTT...GAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGAGAATGCGGCACAAGTaGTGTACCGTGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: CSSADGTSGPCEGSGCRRRMRHK*CTVGGW
Trigger: CCACCCACCCACGGTACACAACTTGTGCCGCATTCT...CCTTCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GAGGCTGTGAAGGGATCCAGCTCCACGTGCCAACCTGCTGTCAGGGACCGCAGCGTACCAGACCACGGATaGAGTTTAGGCCCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: EAVKGSSSTCQPAVRDRSVPDHG*SLGPAK
Trigger: CTTGGCTGGGCCTAAACTCAATCCGTGGTCTGGTAC...GCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCACAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp AGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCGAAGCCTTATTCCTTaGGTAAGGGTCATGCGCTCA +
Preference number: 5 (lower is better)
Translates to: RRCGSSCPTTLRSRASGRRSLIP*VRVMRS
Trigger: TGAGCGCATGACCCTTACCAAAGGAATAAGGCTTCG...CCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTCATAATGGCAGGAGTGTGGCCACCACATaGCCAAAGTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: PLQRGSIRVGRASSHNGRSVATT*PKSTGP
Trigger: GGGGCCAGTGGACTTTGGCAATGTGGTGGCCACACT...CCTGCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CCACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAACACAGGGGGCTGCCTGTTTTTaGGCCCTGCTCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PQSLAKHARAPGIQPGTQGAACF*ALLSSR
Trigger: CCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCC...CTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp AGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RESLGPHSFSASSPSKKSIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...GCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CCGAATCCGTGGCCCCTACAAAGGGGGTCGATCCGGGTGGGAAGAGCTTCGAGTAAAGGGCTCCCCGGGTaGGAAGTACATCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: PNPWPLQRGSIRVGRASSKGLPG*EVHHFL
Trigger: CAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTT...ACTCGAAGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp AGGAACACAGCGAGAATGCGGCACAAGTTGTGTACCGTGGGTGGGTGGAGATTGGTGGGTGGGTGGAGATaGACCTCGGTGTCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: RNTARMRHKLCTVGGWRLVGGWR*TSVSAG
Trigger: CCCTGCGGACACCGAGGTCAATCTCCACCCACCCAC...CAATCTCCACCCACCCACGGTACACAACTTGTGCCGCATTCTCGCTGTGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTTCCTCTCCACAGTCATaGGCCAAGCACGCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: LSFTGPRWDLLSHSPLHSSSPQS*AKHARA
Trigger: GGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGA...ACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp ATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTTCCTCTCCACAGTCATaGGCCAAGCACGCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: ILPELHWPPLGPSLSQSSSSPQS*AKHARA
Trigger: GGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGA...AGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACGTCTCTTCCCTGTCCTaGAAGGGTGGCAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: CLSFTGPRWDLLSHSPLHVSSLS*KGGSLR
Trigger: TCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGAC...GTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGTAGAAGGGTCTCTTCCCTGTCCTaGAAGGGTGGCAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: CSSADGTSGPCEGSGCRRVSSLS*KGGSLR
Trigger: TCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGAC...CCTTCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CTCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGCGAAGCCTTATTCCTTaGGTAAGGGTCATGCGCTCA +
Preference number: 5 (lower is better)
Translates to: LQRRCGSSCPTTLRSRASRSLIP*VRVMRS
Trigger: TGAGCGCATGACCCTTACCAAAGGAATAAGGCTTCG...CGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp TCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCTTCCGATCAATAAAAGGAAGCTACTGTaGCAGAACCAGCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: SSCPTTLRSRASGRLPINKRKLL*QNQPEA
Trigger: GGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTT...ATTGATCGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp AGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCCGGGGACTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RESLGPHSFSASSPSKKSRGLSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCCG...GCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS TCA 90 bp AGGACACGCCTCCCAGCCTCCCTTAGGTATTGGGGTTGGTTCCCCTaGGAATGGCACGACCCAAATGGGAGCGCAAGAGAAGTAGGCTCC +
Preference number: 5 (lower is better)
Translates to: RTRLPASLRYWGWFP*EWHDPNGSAREVGS
Trigger: GGAGCCTACTTCTCTTGCGCTCCCATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCAATACCTAAGGGAGGCTGGGAGGCGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp AGGTATGAAAAGGACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACGGTGACGGGCAGCCCTaGGGTCCAGTGTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: RYEKDKPAHPRQILPELHGDGQP*GPVWPP
Trigger: TGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACC...GTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTTCATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TCCTCTCCACAGTCATTGGCCAAGCACGCTAGAGCCCCAGGTATTCAGCCAGGAATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SSPQSLAKHARAPGIQPGIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...TCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TTCTCAATGCTCCTCAGCCGATGGAACCAGCGGACCGTGCGAGGGAAGTGGCTGAAAGGGCTCCCCGGGTaGGAAGTACATCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: FSMLLSRWNQRTVRGKWLKGLPG*EVHHFL
Trigger: CAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTT...CAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCATTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp ATGAGATGGAGCACGGGTACCCCTCTGCGGAGGAAGGGGATGTGGTCGTCTTCCAAAGGGCTCCCCGGGTaGGAAGTACATCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: MRWSTGTPLRRKGMWSSSKGLPG*EVHHFL
Trigger: CAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTT...GGAAGACGACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGCTCCATCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp ACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCCAATGGCCCCTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TVKGVLGSPLLQRLFTIQWPLSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGGGGCCA...TTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591606.1
CDS-3UTR CAA 90 bp CATGAGCTGGGCCAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCGAAGCCTTATTCCTTaGGTAAGGGTCATGCGCTCA +
Preference number: 5 (lower is better)
Translates to: HELGQVPGTVKGVLGSPLRSLIP*VRVMRS
Trigger: TGAGCGCATGACCCTTACCAAAGGAATAAGGCTTCG...GAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCCAGCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GACAAACCAGCACACCCTAGGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGAAAAGGAAGCTACTGTaGCAGAACCAGCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: DKPAHPRQILPELHWPPLKRKLL*QNQPEA
Trigger: GGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTT...CAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACAATGGGACCTCAAACTaGATGGGGAAATCGAGGCCC +
Preference number: 5 (lower is better)
Translates to: AGNRKGSPWVPTPSAPLHNGTSN*MGKSRP
Trigger: GGGCCTCGATTTCCCCATCAAGTTTGAGGTCCCATT...GTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678102.1
CDS-3UTR CAA 90 bp CACAGAGCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACGGGGACTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HRAKGLPGLEVHHFLGMRRGLSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGTCCCCG...TCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGATCAAGAAGCATAAAGAGACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: VAVEGGIGGSQEIKKHKETLWIQ*SHHPPQ
Trigger: CTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGT...CTCTTTATGCTTCTTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCTTCACCATCAGGAACTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GNRKGSPWVPTPSAPLHHQELSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCTG...ATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677542.1
CDS-3UTR CAA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGCAGGAACTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQQELSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCTG...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTCCTCTCCACAGTCATTGGTCTCTTCCCTGTCCTaGAAGGGTGGCAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: LHWPPLGPSLSQSSPQSLVSSLS*KGGSLR
Trigger: TCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGAC...CAATGACTGTGGAGAGGACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp GGCAGATCCTGCCTGAGCTTCACTGGCCCCCGCTGGGACCTTCTCTCTCACAGTGGTCCCTGCAAACCTTaGGACCAAGTGTTTACCTCT +
Preference number: 5 (lower is better)
Translates to: GRSCLSFTGPRWDLLSHSGPCKP*DQVFTS
Trigger: AGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACC...ACTGTGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp GACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGGAGGCGCCAATGAACAGCGTTaGATCATGGAAAATATTCGA +
Preference number: 5 (lower is better)
Translates to: DAVDPVVPPPSAAGLRGGANEQR*IMENIR
Trigger: TCGAATATTTTCCATGATCAAACGCTGTTCATTGGC...GCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp TTGGGGGCTCCCAGGAGATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: LGAPRRSRSIKSSIAWILTLWIQ*SHHPPQ
Trigger: CTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGT...CAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTCCTGGGAGCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GAGATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTTCCTCTCCACAGTCATaGGCCAAGCACGCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: EIKKHKELNSLDPGGAGASSPQS*AKHARA
Trigger: GGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGA...AGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CAGGGGGCGCAGATAAGTGCTCCAGAGACGCTGTGGATCCAGTTGTCCCACCACGGTCCCTGCAAACCTTaGGACCAAGTGTTTACCTCT +
Preference number: 5 (lower is better)
Translates to: QGAQISAPETLWIQLSHHGPCKP*DQVFTS
Trigger: AGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACC...GTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATCTGCGCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAACGCTGTGGATCCAGTaGTCCCACCACCCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGTLWIQ*SHHPPQ
Trigger: CTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGT...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp GCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTCCCTGTCCTTGAGTGTGGCCACCACATaGCCAAAGTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: ASSYSSGCHPTVVSSLSLSVATT*PKSTGP
Trigger: GGGGCCAGTGGACTTTGGCAATGTGGTGGCCACACT...CAAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp GCCAAAGGGCTCCCCGGGTTGGAAGTACATCACTTCCTGGGGATGAGACTGCAGTTAAAGAACAGCATTTaGCCAGGTGCGGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: AKGLPGLEVHHFLGMRLQLKNSI*PGAVAH
Trigger: GTGAGCCACCGCACCTGGCAAAATGCTGTTCTTTAA...CTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TCCAGAGACGCTGTGGATCCAGTTGTCCCACCACCCTCCGCAGCCGGGCTTCGGGCCAATGAACAGCGTTaGATCATGGAAAATATTCGA +
Preference number: 5 (lower is better)
Translates to: SRDAVDPVVPPPSAAGLRANEQR*IMENIR
Trigger: TCGAATATTTTCCATGATCAAACGCTGTTCATTGGC...CCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGGGGCTGCCTGTTTTTaGGCCCTGCTCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKGAACF*ALLSSR
Trigger: CCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCC...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp AGTACATCACTTCCTGGGGATGAGACTGCAGCAGGTTCAAACGGTGCAGACGCTGTCTCTTCCCTGTCCTaGAAGGGTGGCAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: STSLPGDETAAGSNGADAVSSLS*KGGSLR
Trigger: TCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGAC...AGCGTCTGCACCGTTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp CAGGTGCCGGGAACCGTAAAGGGAGTCCTTGGGTCCCCACTCCTTCAGCGCCTCGCCAATGAACAGCGTTaGATCATGGAAAATATTCGA +
Preference number: 5 (lower is better)
Translates to: QVPGTVKGVLGSPLLQRLANEQR*IMENIR
Trigger: TCGAATATTTTCCATGATCAAACGCTGTTCATTGGC...GAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp ATCAAGAAGCATAAAGAGCTCAATAGCCTGGATCCTGGTGGGGCCGGGGCTGTGAAAAGGAAGCTACTGTaGCAGAACCAGCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: IKKHKELNSLDPGGAGAVKRKLL*QNQPEA
Trigger: GGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTT...CACAGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp TCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGGTCTTCCATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SLSLKGGSLRQSKERRSSIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...GGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp ACAGTATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGACAGGAACTTTCTGACTaGGAGATTTCCCGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TVFGPCKPLDQVFTSGEGQELSD*EISRAA
Trigger: GGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCTG...TCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678862.1
CDS-3UTR CAA 90 bp AACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCTCTGAGAATGCGGCACAAGTaGTGTACCGTGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: NLWTKCLPLGREQVLIPLRMRHK*CTVGGW
Trigger: CCACCCACCCACGGTACACAACTTGTGCCGCATTCT...CAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp GGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAGAAGTCCTCTCCACAGTCATaGGCCAAGCACGCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: GLFPVLEGWQLETIKRKKSSPQS*AKHARA
Trigger: GGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGA...CTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CTGGGGAGGGAGCAAGTTCTTATTCCTCTGGCTGTCATCCCACAGTGGTCTCTTGGTCCCTGCAAACCTTaGGACCAAGTGTTTACCTCT +
Preference number: 5 (lower is better)
Translates to: LGREQVLIPLAVIPQWSLGPCKP*DQVFTS
Trigger: AGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACC...AAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp GTGGCTGTAGAAGGTGGGATTGGGGGCTCCCAGGAGATCAAGAAGCATAAAGAGGGTCCCTGCAAACCTTaGGACCAAGTGTTTACCTCT +
Preference number: 5 (lower is better)
Translates to: VAVEGGIGGSQEIKKHKEGPCKP*DQVFTS
Trigger: AGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACC...CTCTTTATGCTTCTTGATCTCCTGGGAGCCCCCAATCCCACCTTCTACAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp TGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTAAAGAACAGCATTTaGCCAGGTGCGGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: WSLQTFGPSVYLWGGSKFLKNSI*PGAVAH
Trigger: GTGAGCCACCGCACCTGGCAAAATGCTGTTCTTTAA...GAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTACCAGACCACGGATaGAGTTTAGGCCCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: YLVPANLWTKCLPLGREQVPDHG*SLGPAK
Trigger: CTTGGCTGGGCCTAAACTCAATCCGTGGTCTGGTAC...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677542.1
ENST00000678102.1
CDS-3UTR CAA 90 bp TTACTTTTTCAGTTCGCTGACTTAAAGAACAGCATTTTGCCAGGTGCGGTGGCTAGTGTGGCCACCACATaGCCAAAGTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: LLFQFADLKNSILPGAVASVATT*PKSTGP
Trigger: GGGGCCAGTGGACTTTGGCAATGTGGTGGCCACACT...AGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp ACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAAAAAGGGCTCCCCGGGTaGGAAGTACATCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: TVVSSLSLKGGSLRQSKEKGLPG*EVHHFL
Trigger: CAGGAAGTGATGTACTTCCAACCCGGGGAGCCCTTT...TTCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAAGTTCTTATTCCGTCTCTTCCCTGTCCTaGAAGGGTGGCAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: CKPLDQVFTSGEGASSYSVSSLS*KGGSLR
Trigger: TCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGAC...GGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS GCA 90 bp GGCTTCCGATCAATGGGACCTTTCCTCTTAAAAGGAAGCTACTGTTaGAGAACCAGCCCGAAGCCTTATTCCTTTGGTAAGGGTCATGCG +
Preference number: 5 (lower is better)
Translates to: GFRSMGPFLLKGSYC*RTSPKPYSFGKGHA
Trigger: CGCATGACCCTTACCAAAGGAATAAGGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTTAAGAGGAAAGGTCCCATTGATCGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677024.1
ENST00000677542.1
CDS-3UTR CAA 90 bp CACAGTGGTCTCTTCCCTGTCCTTGAAGGGTGGCAGCTTGAGACAATCAAAAGAGGTCCCTGCAAACCTTaGGACCAAGTGTTTACCTCT +
Preference number: 5 (lower is better)
Translates to: HSGLFPVLEGWQLETIKRGPCKP*DQVFTS
Trigger: AGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACC...TCTTTTGATTGTCTCAAGCTGCCACCCTTCAAGGACAGGGAAGAGACCACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp TATTTGGTCCCTGCAAACCTTTGGACCAAGTGTTTACCTCTGGGGAGGGAGCAATTAAAGAACAGCATTTaGCCAGGTGCGGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: YLVPANLWTKCLPLGREQLKNSI*PGAVAH
Trigger: GTGAGCCACCGCACCTGGCAAAATGCTGTTCTTTAA...TTGCTCCCTCCCCAGAGGTAAACACTTGGTCCAAAGGTTTGCAGGGACCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS GCA 90 bp CCGTCTTACTATTTCAGACCTTTCCTCTTAAAAGGAAGCTACTGTTaGAGAACCAGCCCGAAGCCTTATTCCTTTGGTAAGGGTCATGCG +
Preference number: 5 (lower is better)
Translates to: PSYYFRPFLLKGSYC*RTSPKPYSFGKGHA
Trigger: CGCATGACCCTTACCAAAGGAATAAGGCTTCGGGCTGGTTCTGCAACAGTAGCTTCCTTTTAAGAGGAAAGGTCTGAAATAGTAAGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678102.1
CDS-3UTR CAA 90 bp CAATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATAGTGTGGCCACCACATaGCCAAAGTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: QSKERRSSNCSTIRRQRYSVATT*PKSTGP
Trigger: GGGGCCAGTGGACTTTGGCAATGTGGTGGCCACACT...ATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CAATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QSKERRSSNCSTIRRQRYIQEEQ*QGHRGC
Trigger: GCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGAT...ATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp CAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGAAAAGAATGCGGCACAAGTaGTGTACCGTGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QKKEGLPIVAQLGDKGMKRMRHK*CTVGGW
Trigger: CCACCCACCCACGGTACACAACTTGTGCCGCATTCT...TTTCATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS-3UTR CAA 90 bp AATCAAAAGAAAGAAGGTCTTCCAATTGTAGCACAATTAGGAGACAAAGGTATGTTAAAGAACAGCATTTaGCCAGGTGCGGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: NQKKEGLPIVAQLGDKGMLKNSI*PGAVAH
Trigger: GTGAGCCACCGCACCTGGCAAAATGCTGTTCTTTAA...CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS TCA 72 bp GTAGCAGGCGGCGCTTCGGCGGCAAGAGTGGCTCCATaGGGCCACGTTCCCCCAGCCGCAGGCGGGGTCGCC +
Preference number: 6 (lower is better)
Translates to: VAGGASAARVAP*GHVPPAAGGVA
Trigger: GGCGACCCCGCCTGCGGCTGGGGGAACGTGGCCTCATGGAGCCACTCTTGCCGCCGAAGCGCCGCCTGCTAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS CCA 72 bp GCCGCAGGCGGGGTCGCCCGCGGCCCCCGGAACGCATaGCCGCTTTGCCCTGAAACCTGTACCAGACCACGG +
Preference number: 6 (lower is better)
Translates to: AAGGVARGPRNA*PLCPETCTRPR
Trigger: CCGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCCGCGGGCGACCCCGCCTGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000012049.10
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS CCA 72 bp GCAGCTCCTCAGTCCTGCGGTGCCAGCCGCTCCAAATaGTGTAGAACGCCGAGCCCACGGCCAGCGCCAGCA +
Preference number: 6 (lower is better)
Translates to: AAPQSCGASRSK*CRTPSPRPAPA
Trigger: TGCTGGCGCTGGCCGTGGGCTCGGCGTTCTACACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000012049.10
ENST00000366382.8
ENST00000591606.1
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
ENST00000678862.1
CDS GCA 72 bp GGGGTCGCCCGCGGCCCCCGGAACGCATGGCCGCTTTaGCCTGAAACCTGTACCAGACCACGGATTGAGTTT +
Preference number: 6 (lower is better)
Translates to: GVARGPRNAWPL*PETCTRPRIEF
Trigger: AAACTCAATCCGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCCGCGGGCGACCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS TCA 72 bp CTTCTAATAGCCTGGATCCTGGTGGGGCCGGGGCTGTaGGGTATAGACTCCATGAGCTGGGCCAGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: LLIAWILVGPGL*GIDSMSWARCR
Trigger: CCGGCACCTGGCCCAGCTCATGGAGTCTATACCTCACAGCCCCGGCCCCACCAGGATCCAGGCTATTAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678862.1
CDS GCA 72 bp CATGGAATCGGTGGGCCAATAAGCAACAGCTGCGGCTaGACCAGCCCACCCCACAGCGAGCAGCGAAACCAA +
Preference number: 6 (lower is better)
Translates to: HGIGGPISNSCG*TSPPHSEQRNQ
Trigger: TTGGTTTCGCTGCTCGCTGTGGGGTGGGCTGGTGCAGCCGCAGCTGTTGCTTATTGGCCCACCGATTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS CAA 90 bp GGAACGCATGGCCGCTTTGCCCTGAAACCTGTACCAGACCACGGATaGAGTTTAGGCCCAGCCAAGTTCCTCCCCATGGAATCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: GTHGRFALKPVPDHG*SLGPAKFLPMESVG
Trigger: GCCCACCGATTCCATGGGGAGGAACTTGGCTGGGCCTAAACTCAATCCGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCCATGCGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS CCA 72 bp TTGGGGTTGGTTCCCCTGAGAATGGCACGACCCAAATaGGAGCGCAAGAGAAGTAGGCTCCGCCTTAGCGGA +
Preference number: 6 (lower is better)
Translates to: LGLVPLRMARPK*ERKRSRLRLSG
Trigger: TCCGCTAAGGCGGAGCCTACTTCTCTTGCGCTCCCATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS CAA 72 bp CTCCTTCAGCGCCTCTTCACCATCCAAGAAGAGCAGTaGCAGGGTCACCGGGGCTGCCTTTCTGACTTGGAG +
Preference number: 6 (lower is better)
Translates to: LLQRLFTIQEEQ*QGHRGCLSDLE
Trigger: CTCCAAGTCAGAAAGGCAGCCCCGGTGACCCTGCAACTGCTCTTCTTGGATGGTGAAGAGGCGCTGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366382.8
CDS TCA 72 bp CTCCCAGCCTCCCTTAGGTATTGGGGTTGGTTCCCCTaGGAATGGCACGACCCAAATGGGAGCGCAAGAGAA +
Preference number: 6 (lower is better)
Translates to: LPASLRYWGWFP*EWHDPNGSARE
Trigger: TTCTCTTGCGCTCCCATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCAATACCTAAGGGAGGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS CAA 72 bp GGCCGCTTTGCCCTGAAACCTGTACCAGACCACGGATaGAGTTTAGGCCCAGCCAAGTTCCTCCCCATGGAA +
Preference number: 6 (lower is better)
Translates to: GRFALKPVPDHG*SLGPAKFLPME
Trigger: TTCCATGGGGAGGAACTTGGCTGGGCCTAAACTCAATCCGTGGTCTGGTACAGGTTTCAGGGCAAAGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1
CDS CAA 72 bp GCTACTGTTGCAGAACCAGCCCGAAGCCTTATTCCTTaGGTAAGGGTCATGCGCTCAGATGACGAAGACGGT +
Preference number: 6 (lower is better)
Translates to: ATVAEPARSLIP*VRVMRSDDEDG
Trigger: ACCGTCTTCGTCATCTGAGCGCATGACCCTTACCAAAGGAATAAGGCTTCGGGCTGGTTCTGCAACAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677024.1
ENST00000677542.1
ENST00000678102.1