Pregenerated sensors for QPCT (Homo sapiens)
Ensembl gene IDs: ENSG00000115828Ensembl transcript IDs: ENST00000338415.8, ENST00000404976.5, ENST00000444022.1, ENST00000469098.1, ENST00000470075.1, ENST00000480050.1, ENST00000650442.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGGTTCCCCGGGCCGCTaGCGGTCACGAGCCCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLGSPGR*RSRARE Trigger: TTCCCGGGCTCGTGACCGCCAGCGGCCCGGGGAACC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGCAGCAGGTGGAGGGTaGCCACGACGCGCCGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLAAGGG*PRRAGV Trigger: GACACCGGCGCGTCGTGGGCACCCTCCACCTGCTGC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACTCCTCTGGCCAGGCTaGGGCACTCGGACTGACCCC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLLLWPG*GTRTDP Trigger: GGGGTCAGTCCGAGTGCCTCAGCCTGGCCAGAGGAG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACTCTCCGAGTCTGTCTaGGAGCGGGTTCCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLLSESV*ERVPRA Trigger: GGCCCGGGGAACCCGCTCCCAGACAGACTCGGAGAG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAACCAGCAGCAGCAGGTaGAGGGTGCCCACGACGCGC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLTSSSR*RVPTTR Trigger: GCGCGTCGTGGGCACCCTCCACCTGCTGCTGCTGGT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGCCTCTCGCTCCAGGTaGGTGCGGGGTCGATGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLASRSR*VRGRCH Trigger: ATGGCATCGACCCCGCACCCACCTGGAGCGAGAGGC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACCGGTGTCTTCCGCCTaGCATCTCTCCGAGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLPVSSA*HLSESV Trigger: GACAGACTCGGAGAGATGGCAGGCGGAAGACACCGG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACTCGCTCCAGGTGGGTaGGGGGTCGATGCCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLLAPGG*GVDAIF Trigger: AAAGATGGCATCGACCCCGCACCCACCTGGAGCGAG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACATGCAGTTGGCTGGTaGCTCTCGCTCCAGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLHAVGW*LSLQVG Trigger: ACCCACCTGGAGCGAGAGGCACCAGCCAACTGCATG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATGCCATGCAGTTGGCTaGTGCCTCTCGCTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLCHAVG*CLSLQV Trigger: CACCTGGAGCGAGAGGCACCAGCCAACTGCATGGCA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATCCATGCCATGCAGTTaGCTGGTGCCTCTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLSMPCS*LVPLAP Trigger: TGGAGCGAGAGGCACCAGCCAACTGCATGGCATGGA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATGCACATGGCACGGCTaGATCAGTGGCTCCTACAAA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLCTWHG*ISGSYK Trigger: TTTGTAGGAGCCACTGATTCAGCCGTGCCATGTGCA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACGCCCCTCCAAAGAGTaGTCCTTGAGCAAACCCAAT | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLRPSKE*SLSKPN Trigger: ATTGGGTTTGCTCAAGGATCACTCTTTGGAGGGGCG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATTGCCGAAGAGCCGATaGATTCAAAATGGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLLPKSR*IQNGWL Trigger: CAGCCAGCCATTTTGAATTCATCGGCTCTTCGGCAA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATCTGAATTCGCTGCATaGTGTGCTGACGAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLSEFAA*CADEQH Trigger: ATGCTGCTCGTCAGCACATCATGCAGCGAATTCAGA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGAAGATCAGCTGGAGTaGCAAATCTGGCTTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLEDQLE*QIWLGV Trigger: GACTCCAAGCCAGATTTGTCACTCCAGCTGATCTTC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGATACTGGTGCCTTCTaGAATTTGCCGAAGAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLDTGAF*NLPKSR Trigger: TCGGCTCTTCGGCAAATTGCAGAAGGCACCAGTATC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGTGCCTTCTGCAATTTaGCGAAGAGCCGATGAATTC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLVPSAI*RRADEF Trigger: GAATTCATCGGCTCTTCGGCAAATTGCAGAAGGCAC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAAGACCAATAAATCCATaGCATGCAGTTGGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLRPINP*HAVGWC Trigger: GCACCAGCCAACTGCATGGCATGGATTTATTGGTCT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGGAGACGGTATCAGATaGAGAACTGGAACACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLGDGIR*RTGTPL Trigger: AAGAGGTGTTCCAGTTCTGCATCTGATACCGTCTCC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATTGTCATCCATGGTGTaGCAGACTTCAGGGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLLSSMV*QTSGKG Trigger: TCCTTTCCCTGAAGTCTGGCACACCATGGATGACAA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGGTGCTGATGATATTTaGGAAAGACCGGTACCCATA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLGADDI*ERPVPI Trigger: TATGGGTACCGGTCTTTCTCAAATATCATCAGCACC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAAGTGGGAAAAATACTTaGAGTCATAGTGGCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLSGKNT*SHSGRR Trigger: TCGCCTGCCACTATGACTCCAAGTATTTTTCCCACT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGGGAAACGTTGGGTTTaGAGCTCCAATCAAATCCAA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLGKRWV*SSNQIQ Trigger: TTGGATTTGATTGGAGCTCCAAACCCAACGTTTCCC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATCATGTTCAATTGCTTaGAGTCTTTCGAACCACCTG | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLSCSIA*SLSNHL Trigger: CAGGTGGTTCGAAAGACTTCAAGCAATTGAACATGA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACCAAAGAGTGATCCTTaGGCAAACCCAATTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLPKSDP*ANPIHE Trigger: TTCATGAATTGGGTTTGCTCAAGGATCACTCTTTGG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATTTCAGAGATACTGGTaGCTTCTGCAATTTGCCGAA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLFQRYW*LLQFAE Trigger: TTCGGCAAATTGCAGAAGGCACCAGTATCTCTGAAA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACCGATGAATTCAAAATaGCTGGCTGGTGGTAATTCT | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLPMNSK*LAGGNS Trigger: AGAATTACCACCAGCCAGCCATTTTGAATTCATCGG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAACATTTCAGAGATACTaGTGCCTTCTGCAATTTGCC | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLTFQRY*CLLQFA Trigger: GGCAAATTGCAGAAGGCACCAGTATCTCTGAAATGT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATCAAAGAAGATCAGCTaGAGTGACAAATCTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLSKKIS*SDKSGL Trigger: CAAGCCAGATTTGTCACTCCAGCTGATCTTCTTTGA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATTTCTCAAAGAAATCTaGCCGCCTTCAAACTACATG | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLFLKEI*PPSNYM Trigger: CATGTAGTTTGAAGGCGGTCAGATTTCTTTGAGAAA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGGCTGTAAGTCATTTTaGCACATTTCAGAGATACTG | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLGCKSF*HISEIL Trigger: CAGTATCTCTGAAATGTGGCAAAATGACTTACAGCC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAACTCTGTTGTTCCAGTaGGAAAAATACTTGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLTLLFQ*EKYLES Trigger: TGACTCCAAGTATTTTTCCCACTGGAACAACAGAGT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGTGACAAATCTGGCTTaGAGTCTGAAACAGTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLVTNLA*SLKQSL Trigger: TAAAGACTGTTTCAGACTCCAAGCCAGATTTGTCAC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAAAAATTGGGAAACGTTaGGTTTGGAGCTCCAATCAA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLKIGKR*VWSSNQ Trigger: TTGATTGGAGCTCCAAACCCAACGTTTCCCAATTTT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR TCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGAAACTATCGTTGAATaGATGAACCTGATTTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLETIVE*MNLILP Trigger: AGGCAAAATCAGGTTCATTCATTCAACGATAGTTTC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR GCA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAAAGTTCATGTTCAATTaGTTGAAGTCTTTCGAACCA | + |
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Preference number: 4 (lower is better) Translates to: HKMKATFSNRYLSTVEKLKFMFN*LKSFEP Trigger: TGGTTCGAAAGACTTCAAGCAATTGAACATGAACTT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS CCA 90 bp | CACGACGCGCCGGTGTCTTCCGCCTGCCATCTCTCCGAGTCTGTCTaGGAGCGGGTTCCCCGGGCCGCTGGCGGTCACGAGCCCGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: HDAPVSSACHLSESV*ERVPRAAGGHEPGN Trigger: GTTCCCGGGCTCGTGACCGCCAGCGGCCCGGGGAACCCGCTCCCAGACAGACTCGGAGAGATGGCAGGCGGAAGACACCGGCGCGTCGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338415.8 ENST00000404976.5 |
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| CDS GCA 90 bp | CAGCAGCAGGTGGAGGGTGCCCACGACGCGCCGGTGTCTTCCGCCTaGCATCTCTCCGAGTCTGTCTGGGAGCGGGTTCCCCGGGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: QQQVEGAHDAPVSSA*HLSESVWERVPRAA Trigger: AGCGGCCCGGGGAACCCGCTCCCAGACAGACTCGGAGAGATGGCAGGCGGAAGACACCGGCGCGTCGTGGGCACCCTCCACCTGCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338415.8 ENST00000404976.5 |
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| CDS CCA 90 bp | CTGCCATCTCTCCGAGTCTGTCTGGGAGCGGGTTCCCCGGGCCGCTaGCGGTCACGAGCCCGGGAACGCGCGTCCTTCGCCTTCCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LPSLRVCLGAGSPGR*RSRARERASFAFPL Trigger: AAGAGGGAAGGCGAAGGACGCGCGTTCCCGGGCTCGTGACCGCCAGCGGCCCGGGGAACCCGCTCCCAGACAGACTCGGAGAGATGGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338415.8 ENST00000404976.5 |
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| CDS CCA 90 bp | ATAGGAATAAGCGGGGGTGCTGGGAATAAGCTATCAGTTCACAGATaGGGTGAGCGTCAGGGAGGGATGAAGGCACCGGGGCTAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IGISGGAGNKLSVHR*GERQGGMKAPGLVK Trigger: CTTCACTAGCCCCGGTGCCTTCATCCCTCCCTGACGCTCACCCCATCTGTGAACTGATAGCTTATTCCCAGCACCCCCGCTTATTCCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS CCA 90 bp | AAGACCAATAAATCCACATTCCCCTGGCCCATTAGGAGCTGCCAATaGATAACAGGAGGGAGAGCAAATGCCAACAGGAGGTGTGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: KTNKSTFPWPIRSCQ*ITGGRANANRRCVR Trigger: CCTAACACACCTCCTGTTGGCATTTGCTCTCCCTCCTGTTATCCATTGGCAGCTCCTAATGGGCCAGGGGAATGTGGATTTATTGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS CCA 90 bp | TACTGGTGCCTTCTGCAATTTGCCGAAGAGCCGATGAATTCAAAATaGCTGGCTGGTGGTAATTCCAACTCCATGGGAGTCCTGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: YWCLLQFAEEPMNSK*LAGGNSNSMGVLKL Trigger: CAGCTTCAGGACTCCCATGGAGTTGGAATTACCACCAGCCAGCCATTTTGAATTCATCGGCTCTTCGGCAAATTGCAGAAGGCACCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650442.1 |
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| CDS GCA 90 bp | GGGGATCCCGGGTATCGCTCTATCAGCAATGGCTGTAAGTCATTTTaGCACATTTCAGAGATACTGGTGCCTTCTGCAATTTGCCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GDPGYRSISNGCKSF*HISEILVPSAICRR Trigger: TCTTCGGCAAATTGCAGAAGGCACCAGTATCTCTGAAATGTGGCAAAATGACTTACAGCCATTGCTGATAGAGCGATACCCGGGATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338415.8 ENST00000470075.1 ENST00000650442.1 |
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| CDS GCA 90 bp | TCCAATAAGACCAATAAATCCACATTCCCCTGGCCCATTAGGAGCTaGCAATGGATAACAGGAGGGAGAGCAAATGCCAACAGGAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: SNKTNKSTFPWPIRS*QWITGGRANANRRC Trigger: ACACCTCCTGTTGGCATTTGCTCTCCCTCCTGTTATCCATTGGCAGCTCCTAATGGGCCAGGGGAATGTGGATTTATTGGTCTTATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS TCA 90 bp | GACCAAATGTCGTTTAGCAGTGGGATTGAGGGTGCTGATGATATTTaGGAAAGACCGGTACCCATAGGGTGTCTGACTCAAGAAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DQMSFSSGIEGADDI*ERPVPIGCLTQEGV Trigger: GACACCTTCTTGAGTCAGACACCCTATGGGTACCGGTCTTTCTCAAATATCATCAGCACCCTCAATCCCACTGCTAAACGACATTTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000470075.1 ENST00000480050.1 ENST00000650442.1 |
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| CDS CCA 90 bp | GTGACCATTTGTACTTTTATAGGGCGAAGGTCAGTGATAGGGCAATaGATAGGAATAAGCGGGGGTGCTGGGAATAAGCTATCAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VTICTFIGRRSVIGQ*IGISGGAGNKLSVH Trigger: GTGAACTGATAGCTTATTCCCAGCACCCCCGCTTATTCCTATCCATTGCCCTATCACTGACCTTCGCCCTATAAAAGTACAAATGGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAATCCATGCCATGCAGTaGGCTGGTGCCTCTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLIHAMQ*AGASRS Trigger: GGAGCGAGAGGCACCAGCCAACTGCATGGCATGGAT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS GCA 90 bp | TCAGCAATGGCTGTAAGTCATTTTGCCACATTTCAGAGATACTGGTaGCTTCTGCAATTTGCCGAAGAGCCGATGAATTCAAAATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAMAVSHFATFQRYW*LLQFAEEPMNSKWL Trigger: CAGCCATTTTGAATTCATCGGCTCTTCGGCAAATTGCAGAAGGCACCAGTATCTCTGAAATGTGGCAAAATGACTTACAGCCATTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338415.8 ENST00000470075.1 ENST00000650442.1 |
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| CDS TCA 90 bp | GGTTATTTCAGACCTCCGCTCACTGTAAGAATTAATAAGCAACCCTaGACCATAATAACATATCAAGCAGCTTTCCCTCTGCACCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GYFRPPLTVRINKQP*TIITYQAAFPLHPR Trigger: CCTTGGGTGCAGAGGGAAAGCTGCTTGATATGTTATTATGGTTCAGGGTTGCTTATTAATTCTTACAGTGAGCGGAGGTCTGAAATAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480050.1 |
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| CDS CCA 90 bp | CTATCAGCAATGGCTGTAAGTCATTTTGCCACATTTCAGAGATACTaGTGCCTTCTGCAATTTGCCGAAGAGCCGATGAATTCAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAMAVSHFATFQRY*CLLQFAEEPMNSKW Trigger: CCATTTTGAATTCATCGGCTCTTCGGCAAATTGCAGAAGGCACCAGTATCTCTGAAATGTGGCAAAATGACTTACAGCCATTGCTGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338415.8 ENST00000470075.1 ENST00000650442.1 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGGGTCGATGCCATCTTaGCAGCTAAGTGTCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLGSMPS*QLSVET Trigger: GGTCTCGACACTTAGCTGCAAAGATGGCATCGACCC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS TCA 90 bp | CATAACTGTAATTCTGGAAATACCGCCCCTCCAAAGAGTGATCCTTaGGCAAACCCAATTCATGAAGTTCATGTTCAATTGCTTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HNCNSGNTAPPKSDP*ANPIHEVHVQLLEV Trigger: GACTTCAAGCAATTGAACATGAACTTCATGAATTGGGTTTGCTCAAGGATCACTCTTTGGAGGGGCGGTATTTCCAGAATTACAGTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000444022.1 ENST00000469098.1 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACAAGTTCCAACATCATaGCACATGGCACGGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLQVPTS*HMARLN Trigger: ATTCAGCCGTGCCATGTGCAATGATGTTGGAACTTG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATGGGAAACGTTGGGTTaGGAGCTCCAATCAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLWETLG*ELQSNP Trigger: TGGATTTGATTGGAGCTCCAAACCCAACGTTTCCCA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACGTTTAGCAGTGGGATaGAGGGTGCTGATGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLRLAVG*RVLMIF Trigger: AAATATCATCAGCACCCTCAATCCCACTGCTAAACG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAAAGGAAAGGAGTTTCTaGTCTAAGGCACGAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLKERSF*SKARAS Trigger: ACTTGCTCGTGCCTTAGACAAGAAACTCCTTTCCTT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACCCATAGAGAGAATCTaGAGGAGACCAGTGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLPIERI*RRPVKK Trigger: TTTCTTCACTGGTCTCCTCAAGATTCTCTCTATGGG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTACCTACAAACACTCTGTaGTTCCAGTGGGAAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLPTNTL*FQWEKY Trigger: GTATTTTTCCCACTGGAACAACAGAGTGTTTGTAGG...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAAGTGACAAATCTGGCTaGGAGTCTGAAACAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLSDKSG*ESETVF Trigger: AAAGACTGTTTCAGACTCCAAGCCAGATTTGTCACT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAAAAAATTGGGAAACGTaGGGTTTGGAGCTCCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLKNWET*GLELQS Trigger: TGATTGGAGCTCCAAACCCAACGTTTCCCAATTTTT...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATCCAAATTTTCTTCATaGTCATCCATGGTGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLSKFSS*SSMVCQ Trigger: CTGGCACACCATGGATGACAATGAAGAAAATTTGGA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTATTCATGTTCAATTGCTaGAAGTCTTTCGAACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLFMFNC*KSFEPP Trigger: AGGTGGTTCGAAAGACTTCAAGCAATTGAACATGAA...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
||
| CDS-3UTR CAA 90 bp | CATAAAATGAAGGCTACGTTTTCCAACCGCTATTTAAGTACTGTTGAGAAACTAGAAGTTCATGTTCAATaGCTTGAAGTCTTTCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: HKMKATFSNRYLSTVEKLEVHVQ*LEVFRT Trigger: GGTTCGAAAGACTTCAAGCAATTGAACATGAACTTC...TAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCCTTCATTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338415.8 |
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| CDS CCA 72 bp | CTCCGAGTCTGTCTGGGAGCGGGTTCCCCGGGCCGCTaGCGGTCACGAGCCCGGGAACGCGCGTCCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRVCLGAGSPGR*RSRARERASFA Trigger: GGCGAAGGACGCGCGTTCCCGGGCTCGTGACCGCCAGCGGCCCGGGGAACCCGCTCCCAGACAGACTCGGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338415.8 ENST00000404976.5 |
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| CDS CAA 90 bp | ACGAGCCCGGGAACGCGCGTCCTTCGCCTTCCCTCTTCTCCACCCTaGGGTCGACTGCGCCCGCCTTCCCATCGCCCCCGGGTAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSPGTRVLRLPSSPP*GRLRPPSHRPRVAS Trigger: GGAGGCTACCCGGGGGCGATGGGAAGGCGGGCGCAGTCGACCCAAGGGTGGAGAAGAGGGAAGGCGAAGGACGCGCGTTCCCGGGCTCGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404976.5 |
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| CDS CCA 72 bp | CCGGTGTCTTCCGCCTGCCATCTCTCCGAGTCTGTCTaGGAGCGGGTTCCCCGGGCCGCTGGCGGTCACGAG | + |
|
Preference number: 6 (lower is better) Translates to: PVSSACHLSESV*ERVPRAAGGHE Trigger: CTCGTGACCGCCAGCGGCCCGGGGAACCCGCTCCCAGACAGACTCGGAGAGATGGCAGGCGGAAGACACCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338415.8 ENST00000404976.5 |
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| CDS CCA 72 bp | GAACGCGCGTCCTTCGCCTTCCCTCTTCTCCACCCTTaGGTCGACTGCGCCCGCCTTCCCATCGCCCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ERASFAFPLLHP*VDCARLPIAPG Trigger: CCCGGGGGCGATGGGAAGGCGGGCGCAGTCGACCCAAGGGTGGAGAAGAGGGAAGGCGAAGGACGCGCGTTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404976.5 |
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| CDS GCA 72 bp | GTGGAGGGTGCCCACGACGCGCCGGTGTCTTCCGCCTaGCATCTCTCCGAGTCTGTCTGGGAGCGGGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VEGAHDAPVSSA*HLSESVWERVP Trigger: GGGAACCCGCTCCCAGACAGACTCGGAGAGATGGCAGGCGGAAGACACCGGCGCGTCGTGGGCACCCTCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338415.8 ENST00000404976.5 |
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| CDS GCA 72 bp | CCATGCAGTTGGCTGGTGCCTCTCGCTCCAGGTGGGTaGGGGGTCGATGCCATCTTTGCAGCTAAGTGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PCSWLVPLAPGG*GVDAIFAAKCR Trigger: TCGACACTTAGCTGCAAAGATGGCATCGACCCCGCACCCACCTGGAGCGAGAGGCACCAGCCAACTGCATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000469098.1 ENST00000480050.1 |
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| CDS CCA 72 bp | AGCGGGGGTGCTGGGAATAAGCTATCAGTTCACAGATaGGGTGAGCGTCAGGGAGGGATGAAGGCACCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGAGNKLSVHR*GERQGGMKAPG Trigger: CCCCGGTGCCTTCATCCCTCCCTGACGCTCACCCCATCTGTGAACTGATAGCTTATTCCCAGCACCCCCGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS CAA 90 bp | GGCTGGTGCCTCTCGCTCCAGGTGGGTGCGGGGTCGATGCCATCTTaGCAGCTAAGTGTCGAGACCCATAGAGAGAATCTTGAGGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: GWCLSLQVGAGSMPS*QLSVETHRENLEET Trigger: GGTCTCCTCAAGATTCTCTCTATGGGTCTCGACACTTAGCTGCAAAGATGGCATCGACCCCGCACCCACCTGGAGCGAGAGGCACCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000469098.1 ENST00000480050.1 |
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| CDS GCA 72 bp | ATAAGACCAATAAATCCATGCCATGCAGTTGGCTGGTaGCTCTCGCTCCAGGTGGGTGCGGGGTCGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IRPINPCHAVGW*LSLQVGAGSMP Trigger: TGGCATCGACCCCGCACCCACCTGGAGCGAGAGGCACCAGCCAACTGCATGGCATGGATTTATTGGTCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000469098.1 ENST00000480050.1 |
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| CDS CAA 72 bp | CTCTCGCTCCAGGTGGGTGCGGGGTCGATGCCATCTTaGCAGCTAAGTGTCGAGACCCATAGAGAGAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLQVGAGSMPS*QLSVETHRENL Trigger: AAGATTCTCTCTATGGGTCTCGACACTTAGCTGCAAAGATGGCATCGACCCCGCACCCACCTGGAGCGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000469098.1 ENST00000480050.1 |
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| CDS CCA 72 bp | AAATCCAATAAGACCAATAAATCCATGCCATGCAGTTaGCTGGTGCCTCTCGCTCCAGGTGGGTGCGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KSNKTNKSMPCS*LVPLAPGGCGV Trigger: GACCCCGCACCCACCTGGAGCGAGAGGCACCAGCCAACTGCATGGCATGGATTTATTGGTCTTATTGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000469098.1 |
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| CDS CCA 72 bp | AAATCCACATTCCCCTGGCCCATTAGGAGCTGCCAATaGATAACAGGAGGGAGAGCAAATGCCAACAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KSTFPWPIRSCQ*ITGGRANANRR Trigger: CCTCCTGTTGGCATTTGCTCTCCCTCCTGTTATCCATTGGCAGCTCCTAATGGGCCAGGGGAATGTGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS CAA 72 bp | TGGCAGGCGAGGACCAAATGTCGTTTAGCAGTGGGATaGAGGGTGCTGATGATATTTGAGAAAGACCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WQARTKCRLAVG*RVLMIFEKDRY Trigger: GTACCGGTCTTTCTCAAATATCATCAGCACCCTCAATCCCACTGCTAAACGACATTTGGTCCTCGCCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000470075.1 ENST00000480050.1 ENST00000650442.1 |
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| CDS TCA 72 bp | ACGAGCAAGTTCCAACATCATTGCACATGGCACGGCTaGATCAGTGGCTCCTACAAACACTCTGTTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSKFQHHCTWHG*ISGSYKHSVVP Trigger: TGGAACAACAGAGTGTTTGTAGGAGCCACTGATTCAGCCGTGCCATGTGCAATGATGTTGGAACTTGCTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000470075.1 ENST00000480050.1 ENST00000650442.1 |
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| CDS GCA 72 bp | TGCCACATTTCAGAGATACTGGTGCCTTCTGCAATTTaGCGAAGAGCCGATGAATTCAAAATGGCTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CHISEILVPSAI*RRADEFKMAGW Trigger: CCAGCCAGCCATTTTGAATTCATCGGCTCTTCGGCAAATTGCAGAAGGCACCAGTATCTCTGAAATGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338415.8 ENST00000470075.1 ENST00000650442.1 |
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| CDS CCA 72 bp | CTTCTGCAATTTGCCGAAGAGCCGATGAATTCAAAATaGCTGGCTGGTGGTAATTCCAACTCCATGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLQFAEEPMNSK*LAGGNSNSMGV Trigger: GACTCCCATGGAGTTGGAATTACCACCAGCCAGCCATTTTGAATTCATCGGCTCTTCGGCAAATTGCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650442.1 |
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| CDS CAA 72 bp | GTTTCTTGTCTAAGGCACGAGCAAGTTCCAACATCATaGCACATGGCACGGCTGAATCAGTGGCTCCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: VSCLRHEQVPTS*HMARLNQWLLQ Trigger: TTGTAGGAGCCACTGATTCAGCCGTGCCATGTGCAATGATGTTGGAACTTGCTCGTGCCTTAGACAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000470075.1 ENST00000480050.1 ENST00000650442.1 |
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| CDS CAA 90 bp | AGGAAAGGAGTTTCTTGTCTAAGGCACGAGCAAGTTCCAACATCATaGCACATGGCACGGCTGAATCAGTGGCTCCTACAAACACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RKGVSCLRHEQVPTS*HMARLNQWLLQTLC Trigger: ACAGAGTGTTTGTAGGAGCCACTGATTCAGCCGTGCCATGTGCAATGATGTTGGAACTTGCTCGTGCCTTAGACAAGAAACTCCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000470075.1 ENST00000480050.1 ENST00000650442.1 |
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| CDS CAA 90 bp | AACAGGAGGTGTGTTAGGGTCACAGAGGACACAGAATGTGACCATTaGTACTTTTATAGGGCGAAGGTCAGTGATAGGGCAATGGATAGG | + |
|
Preference number: 6 (lower is better) Translates to: NRRCVRVTEDTECDH*YFYRAKVSDRAMDR Trigger: CCTATCCATTGCCCTATCACTGACCTTCGCCCTATAAAAGTACAAATGGTCACATTCTGTGTCCTCTGTGACCCTAACACACCTCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS TCA 72 bp | TCGTTTAGCAGTGGGATTGAGGGTGCTGATGATATTTaGGAAAGACCGGTACCCATAGGGTGTCTGACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SFSSGIEGADDI*ERPVPIGCLTQ Trigger: TTGAGTCAGACACCCTATGGGTACCGGTCTTTCTCAAATATCATCAGCACCCTCAATCCCACTGCTAAACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000470075.1 ENST00000480050.1 ENST00000650442.1 |
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| CDS TCA 72 bp | ATATCAAGCAGCTTTCCCTCTGCACCCAAGGCAGGTTaGGACGCACTGCAAATGCTGGCAAATATAAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISSSFPSAPKAG*DALQMLANIKE Trigger: CTCTTTTATATTTGCCAGCATTTGCAGTGCGTCTCAACCTGCCTTGGGTGCAGAGGGAAAGCTGCTTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480050.1 |
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| CDS CCA 72 bp | TGTACTTTTATAGGGCGAAGGTCAGTGATAGGGCAATaGATAGGAATAAGCGGGGGTGCTGGGAATAAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: CTFIGRRSVIGQ*IGISGGAGNKL Trigger: TAGCTTATTCCCAGCACCCCCGCTTATTCCTATCCATTGCCCTATCACTGACCTTCGCCCTATAAAAGTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS CCA 72 bp | CTACAAACACTCTGTTGTTCCAGTGGGAAAAATACTTaGAGTCATAGTGGCAGGCGAGGACCAAATGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQTLCCSSGKNT*SHSGRRGPNVV Trigger: AACGACATTTGGTCCTCGCCTGCCACTATGACTCCAAGTATTTTTCCCACTGGAACAACAGAGTGTTTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000470075.1 ENST00000480050.1 ENST00000650442.1 |
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| CDS CAA 72 bp | TGTGTTAGGGTCACAGAGGACACAGAATGTGACCATTaGTACTTTTATAGGGCGAAGGTCAGTGATAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CVRVTEDTECDH*YFYRAKVSDRA Trigger: TGCCCTATCACTGACCTTCGCCCTATAAAAGTACAAATGGTCACATTCTGTGTCCTCTGTGACCCTAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444022.1 |
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| CDS GCA 72 bp | GGGTATCGCTCTATCAGCAATGGCTGTAAGTCATTTTaGCACATTTCAGAGATACTGGTGCCTTCTGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: GYRSISNGCKSF*HISEILVPSAI Trigger: AATTGCAGAAGGCACCAGTATCTCTGAAATGTGGCAAAATGACTTACAGCCATTGCTGATAGAGCGATACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338415.8 ENST00000470075.1 ENST00000650442.1 |
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| CDS CAA 72 bp | CCATCAAAGAAGATCAGCTGGAGTGACAAATCTGGCTaGGAGTCTGAAACAGTCTTTAAGGAAAGGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSKKISWSDKSG*ESETVFKERSF Trigger: GAAACTCCTTTCCTTAAAGACTGTTTCAGACTCCAAGCCAGATTTGTCACTCCAGCTGATCTTCTTTGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000480050.1 ENST00000650442.1 |
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| CDS CAA 90 bp | GGAATCAATAAGCAGAAAACAGATACCTTTAAGGAAAGGAGTTTCTaGTCTAAGGCACGAGCAAGTTCCAACATCATTGCACATGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: GINKQKTDTFKERSF*SKARASSNIIAHGT Trigger: CGTGCCATGTGCAATGATGTTGGAACTTGCTCGTGCCTTAGACAAGAAACTCCTTTCCTTAAAGGTATCTGTTTTCTGCTTATTGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470075.1 |
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| CDS TCA 72 bp | AATTCTGGAAATACCGCCCCTCCAAAGAGTGATCCTTaGGCAAACCCAATTCATGAAGTTCATGTTCAATTG | + |
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Preference number: 6 (lower is better) Translates to: NSGNTAPPKSDP*ANPIHEVHVQL Trigger: CAATTGAACATGAACTTCATGAATTGGGTTTGCTCAAGGATCACTCTTTGGAGGGGCGGTATTTCCAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000444022.1 ENST00000469098.1 |
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| CDS TCA 72 bp | AGACCTCCGCTCACTGTAAGAATTAATAAGCAACCCTaGACCATAATAACATATCAAGCAGCTTTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RPPLTVRINKQP*TIITYQAAFPL Trigger: CAGAGGGAAAGCTGCTTGATATGTTATTATGGTTCAGGGTTGCTTATTAATTCTTACAGTGAGCGGAGGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480050.1 |
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| CDS CAA 72 bp | TTGGAGTCTGAAACAGTCTTTAAGGAAAGGAGTTTCTaGTCTAAGGCACGAGCAAGTTCCAACATCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: LESETVFKERSF*SKARASSNIIA Trigger: TGCAATGATGTTGGAACTTGCTCGTGCCTTAGACAAGAAACTCCTTTCCTTAAAGACTGTTTCAGACTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338415.8 ENST00000404976.5 ENST00000480050.1 ENST00000650442.1 |
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| CDS CAA 72 bp | AAGCAGAAAACAGATACCTTTAAGGAAAGGAGTTTCTaGTCTAAGGCACGAGCAAGTTCCAACATCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: KQKTDTFKERSF*SKARASSNIIA Trigger: TGCAATGATGTTGGAACTTGCTCGTGCCTTAGACAAGAAACTCCTTTCCTTAAAGGTATCTGTTTTCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470075.1 |
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