RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for QKI (Homo sapiens)

Ensembl gene IDs: ENSG00000112531

Ensembl transcript IDs: ENST00000275262.11, ENST00000361195.6, ENST00000361752.8, ENST00000361758.8, ENST00000392127.6, ENST00000424802.7, ENST00000453779.6, ENST00000537041.5, ENST00000537124.5, ENST00000537883.5, ENST00000540719.1, ENST00000544361.1, ENST00000544436.5, ENST00000544823.5, ENST00000545346.1, ENST00000545607.5

Found 731 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTGCAGGAAGTCAAGAGTCATAACTCCTCGGGAACAGATGCTGTaGGTGCAGCAGAGAGGAGTTCTGGGAAAAGGAGCATGCACGGGA +
Preference number: 1 (lower is better)
Translates to: PCRKSRVITPREQML*VQQRGVLGKGACTG
Trigger: TCCCGTGCATGCTCCTTTTCCCAGAACTCCTCTCTGCTGCACCCACAGCATCTGTTCCCGAGGAGTTATGACTCTTGACTTCCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR TCA 90 bp AGGGTTCTTTTCCTCACTGGAAAGCAGCGGGGCTTCAGGCCACCATaGGAAACAGCCAGTGGGCCTTTGACTTTACCCAAGTTAAGCTCC +
Preference number: 1 (lower is better)
Translates to: RVLFLTGKQRGFRPP*ETASGPLTLPKLSS
Trigger: GGAGCTTAACTTGGGTAAAGTCAAAGGCCCACTGGCTGTTTCTCATGGTGGCCTGAAGCCCCGCTGCTTTCCAGTGAGGAAAAGAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp GTGTGTACGTATGCACATCCTGGTTTTATGGGCAGGGTGCCTTCGTaGCCTCTTACACCTGGAGCTACTGCACTGGTGCGTATGGGAGTA +
Preference number: 1 (lower is better)
Translates to: VCTYAHPGFMGRVPS*PLTPGATALVRMGV
Trigger: TACTCCCATACGCACCAGTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAACCAGGATGTGCATACGTACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 90 bp CACCGATTGTGTGTACGTATGCACATCCTGGTTTTATGGGCAGGGTaGCTTCGTGACCTCTTACACCTGGAGCTACTGCACTGGTGCGTA +
Preference number: 1 (lower is better)
Translates to: HRLCVRMHILVLWAG*LRDLLHLELLHWCV
Trigger: TACGCACCAGTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAACCAGGATGTGCATACGTACACACAATCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp TATACAAGTACAATTCCACGTGGCAAAATCAGGGAGATCTTGCGCTaGAAGTGCTGGAACAGCAGCTGGTGGCTAAGAGCCCCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: YTSTIPRGKIREILR*KCWNSSWWLRAPAL
Trigger: CAGGGCTGGGGCTCTTAGCCACCAGCTGCTGTTCCAGCACTTTCAGCGCAAGATCTCCCTGATTTTGCCACGTGGAATTGTACTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR TCA 90 bp AACACTGTGGCTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATaGATTAATTCATTCGCCTTCTCCCCCACCCCCTGGCAATTAGTG +
Preference number: 1 (lower is better)
Translates to: NTVAALCCTYRLLLL*INSFAFSPTPWQLV
Trigger: CACTAATTGCCAGGGGGTGGGGGAGAAGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAGCCACAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp ATTAAACCAGCTTCGGGCCCTGGAGGAACTATTGCAGCAGTTGGGTaGGGAGTTCCGTTTGGCATGACAGCGGTCTGTATTTGTCTGATC +
Preference number: 1 (lower is better)
Translates to: IKPASGPGGTIAAVG*GVPFGMTAVCICLI
Trigger: GATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGTTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR CCA 90 bp ATAACCAGACACCGATTGTGTGTACGTATGCACATCCTGGTTTTATaGGCAGGGTGCCTTCGTGACCTCTTACACCTGGAGCTACTGCAC +
Preference number: 1 (lower is better)
Translates to: ITRHRLCVRMHILVL*AGCLRDLLHLELLH
Trigger: GTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAACCAGGATGTGCATACGTACACACAATCGGTGTCTGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CCA 90 bp GGGCCCTGGAGGAACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGGT +
Preference number: 1 (lower is better)
Translates to: GPWRNYCSSWVRSSV*HDSGLYLSDQRHYG
Trigger: ACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR CCA 90 bp ACATCCTGGTTTTATGGGCAGGGTGCCTTCGTGACCTCTTACACCTaGAGCTACTGCACTGGTGCGTATGGGAGTAACTACTTTCATGTT +
Preference number: 1 (lower is better)
Translates to: TSWFYGQGAFVTSYT*SYCTGAYGSNYFHV
Trigger: AACATGAAAGTAGTTACTCCCATACGCACCAGTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAACCAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 90 bp GTGAGTGACCATTTATATATACCAGGACACCTAGACTACATCCTCTaGCAAGTCTTGGCCTCCTACACAGGTGTGTCACCATGCAAGACC +
Preference number: 1 (lower is better)
Translates to: VSDHLYIPGHLDYIL*QVLASYTGVSPCKT
Trigger: GGTCTTGCATGGTGACACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGATGTAGTCTAGGTGTCCTGGTATATATAAATGGTCACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR GCA 90 bp TTTTATGGGCAGGGTGCCTTCGTGACCTCTTACACCTGGAGCTACTaGACTGGTGCGTATGGGAGTAACTACTTTCATGTTAAGTTTTCC +
Preference number: 1 (lower is better)
Translates to: FYGQGAFVTSYTWSY*TGAYGSNYFHVKFS
Trigger: GGAAAACTTAACATGAAAGTAGTTACTCCCATACGCACCAGTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 90 bp CTATGGTCCAAGGACTGTGTTTTGAGAATCACCGATCAAGACAAATaGCATGCTCCAACACACCAGTCGGTAATAGTAGTTCACCGTGGC +
Preference number: 1 (lower is better)
Translates to: LWSKDCVLRITDQDK*HAPTHQSVIVVHRG
Trigger: GCCACGGTGAACTACTATTACCGACTGGTGTGTTGGAGCATGGCATTTGTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGACCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR GCA 90 bp TACATCCTCTGCCAAGTCTTGGCCTCCTACACAGGTGTGTCACCATaGAAGACCATACAGTTCATTACAACTAAAAGGTCAGTTGGTCTC +
Preference number: 1 (lower is better)
Translates to: YILCQVLASYTGVSP*KTIQFITTKRSVGL
Trigger: GAGACCAACTGACCTTTTAGTTGTAATGAACTGTATGGTCTTGCATGGTGACACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR GCA 90 bp GTCCAAGGACTGTGTTTTGAGAATCACCGATCAAGACAAATGCCATaGTCCAACACACCAGTCGGTAATAGTAGTTCACCGTGGCAAGAA +
Preference number: 1 (lower is better)
Translates to: VQGLCFENHRSRQMP*SNTPVGNSSSPWQE
Trigger: TTCTTGCCACGGTGAACTACTATTACCGACTGGTGTGTTGGAGCATGGCATTTGTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR CCA 90 bp ACAATGTGGTGTCTTTTGCCAAGAAGAGGCAACAACATTATAATGTaGAATCAACACTGTGGCTGCCCTTTGCTGCACCTATCGCCTCCT +
Preference number: 1 (lower is better)
Translates to: TMWCLLPRRGNNIIM*NQHCGCPLLHLSPP
Trigger: AGGAGGCGATAGGTGCAGCAAAGGGCAGCCACAGTGTTGATTCCACATTATAATGTTGTTGCCTCTTCTTGGCAAAAGACACCACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp ACAGTTCCCAGAAAGCGTAGATACTATGGTCCAAGGACTGTGTTTTaGGAATCACCGATCAAGACAAATGCCATGCTCCAACACACCAGT +
Preference number: 1 (lower is better)
Translates to: TVPRKRRYYGPRTVF*ESPIKTNAMLQHTS
Trigger: ACTGGTGTGTTGGAGCATGGCATTTGTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGACCATAGTATCTACGCTTTCTGGGAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR GCA 90 bp GCATTTCTTATAGACAAGAACTGCAGAACTAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCT +
Preference number: 1 (lower is better)
Translates to: AFLIDKNCRTKLTSV*GHNPLVRMDTHIVP
Trigger: AGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTCTATAAGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR TCA 90 bp GTGGAGGATAAGCAGCACTTTCCAGCTGCAGTTGGCTTGAGAGGATaGAGCACATGCACTTTTTCCAGTTGGTTTATTGCATTTCATGTA +
Preference number: 1 (lower is better)
Translates to: VEDKQHFPAAVGLRG*STCTFSSWFIAFHV
Trigger: TACATGAAATGCAATAAACCAACTGGAAAAAGTGCATGTGCTTCATCCTCTCAAGCCAACTGCAGCTGGAAAGTGCTGCTTATCCTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 90 bp GGAATTAGTAATGCAGATGCTGAAAGGCAAGTGGCAAGAGAAGAATaGCTCAAACAAAGGCTACTTTGTTCCCATCTCTACTGCACCTAC +
Preference number: 1 (lower is better)
Translates to: GISNADAERQVAREE*LKQRLLCSHLYCTY
Trigger: GTAGGTGCAGTAGAGATGGGAACAAAGTAGCCTTTGTTTGAGGCATTCTTCTCTTGCCACTTGCCTTTCAGCATCTGCATTACTAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp AAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATATTAAAAGATaGTCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTA +
Preference number: 1 (lower is better)
Translates to: KRGLLTVRLGWDIKR*SVLWDELGLIALLL
Trigger: TAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
3UTR TCA 90 bp AGAAAAAGATTCCTAGAAGTCTCTCACAGTAACTGCCTCTGTCATTaGGTAGTTAAGGACCATCTGTCTCCCCTTCTTAAGAGAGGCCTT +
Preference number: 1 (lower is better)
Translates to: RKRFLEVSHSNCLCH*VVKDHLSPLLKRGL
Trigger: AAGGCCTCTCTTAAGAAGGGGAGACAGATGGTCCTTAACTACTCAATGACAGAGGCAGTTACTGTGAGAGACTTCTAGGAATCTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
3UTR CCA 90 bp GGTAAAACAAAGGGGTTGCACAGAAACAGTTTGTTCCACATTGACTaGTCGTGTTATAACAGCTGCTGTATTCTAGTCCTTCATCCAGCA +
Preference number: 1 (lower is better)
Translates to: GKTKGLHRNSLFHID*SCYNSCCILVLHPA
Trigger: TGCTGGATGAAGGACTAGAATACAGCAGCTGTTATAACACGACCAGTCAATGTGGAACAAACTGTTTCTGTGCAACCCCTTTGTTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR CCA 90 bp TTTGCCAAGAAGAGGCAACAACATTATAATGTGGAATCAACACTGTaGCTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTA +
Preference number: 1 (lower is better)
Translates to: FAKKRQQHYNVESTL*LPFAAPIASFYYEL
Trigger: TAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAGCCACAGTGTTGATTCCACATTATAATGTTGTTGCCTCTTCTTGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp CATAAAGTAGTTCTCAAGTGGAAAAGTTATCATTCCCAATGTCCTTaGGTTGTTCCTTCCTTAATCAACCTTTGTCACATTCTGCTTCAC +
Preference number: 1 (lower is better)
Translates to: HKVVLKWKSYHSQCP*VVPSLINLCHILLH
Trigger: GTGAAGCAGAATGTGACAAAGGTTGATTAAGGAAGGAACAACTCAAGGACATTGGGAATGATAACTTTTCCACTTGAGAACTACTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR TCA 90 bp GCATTTCATGTACGGTCATGCAGTTCTCCGTTCACATGTGACCTGTaGACACCTATTTCGACTATATATATATATATACACAATTTCCAC +
Preference number: 1 (lower is better)
Translates to: AFHVRSCSSPFTCDL*TPISTIYIYIHNFH
Trigger: GTGGAAATTGTGTATATATATATATATAGTCGAAATAGGTGTTCACAGGTCACATGTGAACGGAGAACTGCATGACCGTACATGAAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp ATTAGCAGCTTGACAGACAGCTTCGAATTTTCACAGACTACTACATaGACTGTTATGGCAACGGAAACTTTTACAAATAGTAGCATGTTA +
Preference number: 1 (lower is better)
Translates to: ISSLTDSFEFSQTTT*TVMATETFTNSSML
Trigger: TAACATGCTACTATTTGTAAAAGTTTCCGTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAGCTGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp GTTTATTGCATTTCATGTACGGTCATGCAGTTCTCCGTTCACATGTaGCCTGTGAACACCTATTTCGACTATATATATATATATACACAA +
Preference number: 1 (lower is better)
Translates to: VYCISCTVMQFSVHM*PVNTYFDYIYIYTQ
Trigger: TTGTGTATATATATATATATAGTCGAAATAGGTGTTCACAGGTCACATGTGAACGGAGAACTGCATGACCGTACATGAAATGCAATAAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 90 bp TTCACTTCTTCAACTGCTCTCTTCAATTTGATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATTAGTACATGTAAATCTTCATTTAGA +
Preference number: 1 (lower is better)
Translates to: FTSSTALFNLISALF*ASSTVISTCKSSFR
Trigger: TCTAAATGAAGATTTACATGTACTAATCACTGTGGAAGATGCTCAGAACAGAGCAGAAATCAAATTGAAGAGAGCAGTTGAAGAAGTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR CCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGTGCTGGAACAGCAGCTaGTGGCTAAGAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSCWNSS*WLRAPA
Trigger: GGCTGGGGCTCTTAGCCACCAGCTGCTGTTCCAGCA...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR TCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGGGGTCCACTGTCACTTaGGATTTGCCACGTCTGGTA +
Preference number: 2 (lower is better)
Translates to: SPSWTRKQAQISTGAREPGSTVT*DLPRLV
Trigger: TACCAGACGTGGCAAATCTCAAGTGACAGTGGACCC...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR GCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCCTGGGAAAAGGAGCATaGACGGGACCACAGGACAGA +
Preference number: 2 (lower is better)
Translates to: QCRQHHGNQKMARPFALALGKGA*TGPQDR
Trigger: TCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAATGCTGGAACAGCAGCTaGTGGCTAAGAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: WEPENGQAFCTSQHFPVECWNSS*WLRAPA
Trigger: GGCTGGGGCTCTTAGCCACCAGCTGCTGTTCCAGCA...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGTACGTATGCACATCCTaGTTTTATGGGCAGGGTGCC +
Preference number: 2 (lower is better)
Translates to: SPSWTRKQAQISTGAREPYVCTS*FYGQGA
Trigger: GGCACCCTGCCCATAAAACCAGGATGTGCATACGTA...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CAA 90 bp AGCAGTTGGGTGAGGAGTTCCGTTTGGCATGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTATGGTAGGGCCAGCTGGCGTAGGAGT +
Preference number: 2 (lower is better)
Translates to: SSWVRSSVWHDSGLY*SDQRHYGRASWRRS
Trigger: ACTCCTACGCCAGCTGGCCCTACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR CCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACAGCAGAGAGGAGTTCTaGGAAAAGGAGCATGCACGG +
Preference number: 2 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNSREEF*EKEHAR
Trigger: CCGTGCATGCTCCTTTTCCCAGAACTCCTCTCTGCT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGGACGGGCCAATGGGGTaGGACCTAAAACTCAGAATG +
Preference number: 2 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVDGPMG*DLKLRM
Trigger: CATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTC...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR-3UTR GCA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATCTCCTCGGGAACAGATaGTGTGGGTGCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNLLGNR*CGCSRE
Trigger: CTCTCTGCTGCACCCACAGCATCTGTTCCCGAGGAG...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAATGGAACAGCAGCTGGTaGCTAAGAGCCCCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKWNSSW*LRAPAL
Trigger: CAGGGCTGGGGCTCTTAGCCACCAGCTGCTGTTCCA...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR GCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGGGGCACCTGAGTGCATaGACACACACAGATAACATA +
Preference number: 2 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVGHLSA*THTDNI
Trigger: TATGTTATCTGTGTGTGTGCATGCACTCAGGTGCCC...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR GCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCTGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC +
Preference number: 2 (lower is better)
Translates to: QCRQHHGNQKMARPFALAWTRIS*LRTLVA
Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCTCCTCTGCCAAGTCTTaGCCTCCTACACAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: QHHGNQKMARPFALANTFSSAKS*PPTQVC
Trigger: ACACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGA...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACATCCTTGGAGCAGCCTaGGCTGTTGGTGATTTAATG +
Preference number: 2 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNILGAA*AVGDLM
Trigger: CATTAAATCACCAACAGCCCAGGCTGCTCCAAGGAT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR TCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCACTTCCCCATCCCTATaGGACGTGCTCATACAGAAC +
Preference number: 2 (lower is better)
Translates to: QHHGNQKMARPFALANTFTSPSL*DVLIQN
Trigger: GTTCTGTATGAGCACGTCTCATAGGGATGGGGAAGT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR TCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACGGCTTCAGGCCACCATaGGAAACAGCCAGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNGFRPP*ETASGP
Trigger: AGGCCCACTGGCTGTTTCTCATGGTGGCCTGAAGCC...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR GCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACAGTCAACAGCATGCATaGAGCACCAAGGTCATATAC +
Preference number: 2 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNSQQHA*STKVIY
Trigger: GTATATGACCTTGGTGCTGCATGCATGCTGTTGACT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCAGACGACCACGGAGCTaGGGTCTATTTTGTTCACTG +
Preference number: 2 (lower is better)
Translates to: QHHGNQKMARPFALANTFRRPRS*GLFCSL
Trigger: CAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCCATCCAGCAAGTCAATaGGCTGAAATATCAGGCATG +
Preference number: 2 (lower is better)
Translates to: QCRQHHGNQKMARPFALAHPASQ*AEISGM
Trigger: CATGCCTGATATTTCAGCCCATTGACTTGCTGGATG...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR-3UTR CCA 90 bp AATACACCACTAGGTTCAATAGGATACTCAAGGATTGATGTAGCTGGTGCCAATTATGGTAGGGCCAGCTaGCGTAGGAGTACGCAGGGC +
Preference number: 2 (lower is better)
Translates to: NTPLGSIGYSRIDVAGANYGRAS*RRSTQG
Trigger: GCCCTGCGTACTCCTACGCCAGCTGGCCCTACCATA...ATTGGCACCAGCTACATCAATCCTTGAGTATCCTATTGAACCTAGTGGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR TCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCTTTACCCAACCAAACTaGACCTCAGTTACCAAAGTG +
Preference number: 2 (lower is better)
Translates to: QCRQHHGNQKMARPFALAFTQPN*TSVTKV
Trigger: CACTTTGGTAACTGAGGTTCAGTTTGGTTGGGTAAA...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR-3UTR GCA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGCTCCTCGGGAACAGATaGTGTGGGTGCAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQLLGNR*CGCSRE
Trigger: CTCTCTGCTGCACCCACAGCATCTGTTCCCGAGGAG...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR GCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACACATATTCACTGAAGTaGCTTTCTTGCAGCAGGACT +
Preference number: 2 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNTYSLK*LSCSRT
Trigger: AGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR GCA 90 bp GGAGTTCCGTTTGGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: GVPFGMTAVCICLIKGIMAPNWA*LYFAPP
Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...CATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR CCA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAAGCAGAGAGGAGTTCTaGGAAAAGGAGCATGCACGG +
Preference number: 2 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKSREEF*EKEHAR
Trigger: CCGTGCATGCTCCTTTTCCCAGAACTCCTCTCTGCT...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR CAA 90 bp AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCATATCGTGCCTTCGAACTTTAGTAGC +
Preference number: 2 (lower is better)
Translates to: KNCRTKLTSVCGHNP*VRMDTHIVPSNFSS
Trigger: GCTACTAAAGTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR TCA 90 bp ATATCGTGCCTTCGAACTTTAGTAGCCACCGCACCTAATACACCACTAGGTTCACTTTGCCTCGGACCATaGTTTTACATCCGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: ISCLRTLVATAPNTPLGSLCLGP*FYIRFL
Trigger: CAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAG...TGAACCTAGTGGTGTATTAGGTGCGGTGGCTACTAAAGTTCGAAGGCACGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR GCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEKLTSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR CAA 90 bp AGCTGCAGTTGGCTTGAGAGGATGAAGCACATGCACTTTTTCCAGTaGGTTTATTGCATTTCATGTACGGTCATGCAGTTCTCCGTTCAC +
Preference number: 2 (lower is better)
Translates to: SCSWLERMKHMHFFQ*VYCISCTVMQFSVH
Trigger: GTGAACGGAGAACTGCATGACCGTACATGAAATGCAATAAACCAACTGGAAAAAGTGCATGTGCTTCATCCTCTCAAGCCAACTGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR TCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGAAATGTATTTGTTCATaGAACAAAGGGCACCTGAGT +
Preference number: 2 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVKCICS*NKGHLS
Trigger: ACTCAGGTGCCCTTTGTTTCATGAACAAATACATTT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR TCA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCATCTCAAATAAAGTTTaGGAAGTGGAGCTGATGGAG +
Preference number: 2 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVISNKV*EVELME
Trigger: CTCCATCAGCTCCACTTCTCAAACTTTATTTGAGAT...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR-3UTR TCA 90 bp GCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT +
Preference number: 2 (lower is better)
Translates to: AFASDHDFTSGFCFKLFGISALF*ASSTVI
Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...GCCAAACAACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR GCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAACATATTCACTGAAGTaGCTTTCTTGCAGCAGGACT +
Preference number: 2 (lower is better)
Translates to: WEPENGQAFCTSQHFPVETYSLK*LSCSRT
Trigger: AGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR GCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCATCCCTATGAGACGTaGTCATACAGAACACTTACA +
Preference number: 2 (lower is better)
Translates to: QHHGNQKMARPFALANTFHPYET*SYRTLT
Trigger: TGTAAGTGTTCTGTATGAGCACGTCTCATAGGGATG...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR GCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAACAGGTGTGTCACCATaGAAGACCATACAGTTCATT +
Preference number: 2 (lower is better)
Translates to: WEPENGQAFCTSQHFPVETGVSP*KTIQFI
Trigger: AATGAACTGTATGGTCTTGCATGGTGACACACCTGT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR TCA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGCGATTACCAGTTAACTaGTCAGCAGGCAGGCATGGT +
Preference number: 2 (lower is better)
Translates to: NAVTATSYQGIKTGITSWRLPVN*SAGRHG
Trigger: ACCATGCCTGCCTGCTGATCAGTTAACTGGTAATCG...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR GCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACAATATCATGTTTTACTaGTTAGGTGGCAAAGCAAGA +
Preference number: 2 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNNIMFY*LGGKAR
Trigger: TCTTGCTTTGCCACCTAAGCAGTAAAACATGATATT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR GCA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAACCAACACACATGTCTaGATCTGTTTTGAAGGGCAC +
Preference number: 2 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKTNTHV*ICFEGH
Trigger: GTGCCCTTCAAAACAGATGCAGACATGTGTGTTGGT...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR GCA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACTGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC +
Preference number: 2 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDWTRIS*LRTLVA
Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAAAGTACAATTCCACGTaGCAAAATCAGGGAGATCTT +
Preference number: 2 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEKYNST*QNQGDL
Trigger: AAGATCTCCCTGATTTTGCCACGTGGAATTGTACTT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp AATACACCACTAGGTTCAATAGGATACTCAAGGATTGATGTAGCTGGTGCCAATGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT +
Preference number: 2 (lower is better)
Translates to: NTPLGSIGYSRIDVAGANVRSSV*HDSGLY
Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...ATTGGCACCAGCTACATCAATCCTTGAGTATCCTATTGAACCTAGTGGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR GCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCAGAAACAAGTTTTACTaGAGTGCCTCTTGCTATTTC +
Preference number: 2 (lower is better)
Translates to: QHHGNQKMARPFALANTFRNKFY*SASCYF
Trigger: GAAATAGCAAGAGGCACTGCAGTAAAACTTGTTTCT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR GCA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCCCGTTCAATTCATTTTaGAATACCAACCCCAAATTT +
Preference number: 2 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVPFNSF*NTNPKF
Trigger: AAATTTGGGGTTGGTATTGCAAAATGAATTGAACGG...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR GCA 90 bp GGAGTTCCGTTTGGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GVPFGMTAVCICLIKGIMKSSFR*SQLGLP
Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTT...CATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR CCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAATGTTATTTCTGATGTaGACAACAGCTGTGTCTAGT +
Preference number: 2 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEMLFLM*TTAVSS
Trigger: ACTAGACACAGCTGTTGTCCACATCAGAAATAACAT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACATCAGCAGGCAGGCATaGTCAGGTCATCATTGGGTG +
Preference number: 2 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYISRQA*SGHHWV
Trigger: CACCCAATGATGACCTGACCATGCCTGCCTGCTGAT...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
3UTR-3UTR CCA 90 bp ATTGAGCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTTGTTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT +
Preference number: 2 (lower is better)
Translates to: IEPLPRTMILHPVSASSCLDAPN*ACLYFA
Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...ACAACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR TCA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGCACCAACTTCTTGACTaGAAGCTCAGCTTTCAACTG +
Preference number: 2 (lower is better)
Translates to: NAVTATSYQGIKTGITSWHQLLD*KLSFQL
Trigger: CAGTTGAAAGCTGAGCTTTCAGTCAAGAAGTTGGTG...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR TCA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATCTCTCATGTTTAATATaGCTAGGACTCCAAAACACA +
Preference number: 2 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNLSCLI*LGLQNT
Trigger: TGTGTTTTGGAGTCCTAGTCATATTAAACATGAGAG...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR CAA 90 bp GGGATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATaGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCC +
Preference number: 2 (lower is better)
Translates to: GILKDDQCCGMNWAL*LYYYSVQFLEPLSP
Trigger: GGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
3UTR CAA 90 bp CAGAAACGAGAGGACTGTGCTGAGGTTAACCAGTTTGATTCCACATaGAAGGCACGAGTGCATATAATGTTGGTAAATCTCTTCATATCA +
Preference number: 2 (lower is better)
Translates to: QKREDCAEVNQFDST*KARVHIMLVNLFIS
Trigger: TGATATGAAGAGATTTACCAACATTATATGCACTCGTGCCTTCAATGTGGAATCAAACTGGTTAACCTCAGCACAGTCCTCTCGTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR TCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACGCTGTGAGCAGACAGTaGTTATTTTGGAGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNAVSRQ*LFWRRK
Trigger: TTTCCTTCTCCAAAATAATCACTGTCTGCTCACAGC...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR GCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATAGTCAACAGCATGCATaGAGCACCAAGGTCATATAC +
Preference number: 2 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANSQQHA*STKVIY
Trigger: GTATATGACCTTGGTGCTGCATGCATGCTGTTGACT...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR GCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATGGGCACCTGAGTGCATaGACACACACAGATAACATA +
Preference number: 2 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYGHLSA*THTDNI
Trigger: TATGTTATCTGTGTGTGTGCATGCACTCAGGTGCCC...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATTCATTTCAAACATCTTaGGCCTTAACCTATTGTATC +
Preference number: 2 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNSFQTS*ALTYCI
Trigger: GATACAATAGGTTAAGGCCCAAGATGTTTGAAATGA...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTTGGTTAACAGCGTATTaGTACAGTTTTGTCTTCTAT +
Preference number: 2 (lower is better)
Translates to: LPFAAPIASFYYELIHSPWLTAY*YSFVFY
Trigger: ATAGAAGACAAAACTGTACCAATACGCTGTTAACCA...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR TCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCAGCAAGTCAATGGGCTaGAATATCAGGCATGACTGG +
Preference number: 2 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSSKSMG*NIRHDW
Trigger: CCAGTCATGCCTGATATTTCAGCCCATTGACTTGCT...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR-3UTR GCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACACATATTCACTGAAGTaGCTTTCTTGCAGCAGGACT +
Preference number: 2 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYTYSLK*LSCSRT
Trigger: AGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGT...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp TATTCACACAGCTGGATCTCATACCACCACAGAACTTCAAGAGACAGTTTACCTTGCATAACAACATTTTaGTCAACAACGGACCACTTA +
Preference number: 2 (lower is better)
Translates to: YSHSWISYHHRTSRDSLPCITTF*STTDHL
Trigger: TAAGTGGTCCGTTGTTGACCAAAATGTTGTTATGCA...AGGTAAACTGTCTCTTGAAGTTCTGTGGTGGTATGAGATCCAGCTGTGTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR CAA 90 bp AACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTaGCAAATTTTATGGACACCCAACGCATTTCTTATAGACAAGAAC +
Preference number: 2 (lower is better)
Translates to: NCVQVSNYIFPSGVV*QILWTPNAFLIDKN
Trigger: GTTCTTGTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR GCA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTACATATTCACTGAAGTaGCTTTCTTGCAGCAGGACT +
Preference number: 2 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFTYSLK*LSCSRT
Trigger: AGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGT...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR GCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSKLTSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTT...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACAAGTACAATTCCACGTaGCAAAATCAGGGAGATCTT +
Preference number: 2 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYKYNST*QNQGDL
Trigger: AAGATCTCCCTGATTTTGCCACGTGGAATTGTACTT...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR CAA 90 bp GACATGAAGCTTTACAATGAGAAACAAGTTTTACTGCAGTGCCTCTaGCTATTTCTAAGCAGTAAACTGGTCCATCACCTCTTATTCATT +
Preference number: 2 (lower is better)
Translates to: DMKLYNEKQVLLQCL*LFLSSKLVHHLLFI
Trigger: AATGAATAAGAGGTGATGGACCAGTTTACTGCTTAGAAATAGCAAGAGGCACTGCAGTAAAACTTGTTTCTCATTGTAAAGCTTCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR CAA 90 bp AATTACTCAGTTTCAGCTGGTGCCTACTATGTTAAGAATACATGTTaGGGCTTTCTAGACACTTTGATCTTTCAGGAAGAGCAGATTTTG +
Preference number: 2 (lower is better)
Translates to: NYSVSAGAYYVKNTC*GFLDTLIFQEEQIL
Trigger: CAAAATCTGCTCTTCCTGAAAGATCAAAGTGTCTAGAAAGCCCAAACATGTATTCTTAACATAGTAGGCACCAGCTGAAACTGAGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR TCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAAATGTATTTGTTCATaGAACAAAGGGCACCTGAGT +
Preference number: 2 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNKCICS*NKGHLS
Trigger: ACTCAGGTGCCCTTTGTTTCATGAACAAATACATTT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR GCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACCCGTTCAATTCATTTTaGAATACCAACCCCAAATTT +
Preference number: 2 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYPFNSF*NTNPKF
Trigger: AAATTTGGGGTTGGTATTGCAAAATGAATTGAACGG...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATACATACAGAGCATCATaGCTTTCTTTACTTGAACAA +
Preference number: 2 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNTYRAS*LSLLEQ
Trigger: TTGTTCAAGTAAAGAAAGCCATGATGCTCTGTATGT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAATCTGAGTTCTCCAAGTaGTCAATATCATGTTTTACT +
Preference number: 2 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKSEFSK*SISCFT
Trigger: AGTAAAACATGATATTGACCACTTGGAGAACTCAGA...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACTCTGAGTTCTCCAAGTaGTCAATATCATGTTTTACT +
Preference number: 2 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYSEFSK*SISCFT
Trigger: AGTAAAACATGATATTGACCACTTGGAGAACTCAGA...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR CAA 90 bp AAAATCTTAAGAATACAACTACAGTCATGCCTGCATAACAACATTTaGGTCAACAACGGACCACTTATACTATGTGGTCCCATAAGATTA +
Preference number: 2 (lower is better)
Translates to: KILRIQLQSCLHNNI*VNNGPLILCGPIRL
Trigger: TAATCTTATGGGACCACATAGTATAAGTGGTCCGTTGTTGACCAAAATGTTGTTATGCAGGCATGACTGTAGTTGTATTCTTAAGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR-3UTR GCA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTCCGTTCAATTCATTTTaGAATACCAACCCCAAATTT +
Preference number: 2 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFPFNSF*NTNPKF
Trigger: AAATTTGGGGTTGGTATTGCAAAATGAATTGAACGG...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAACATACAGAGCATCATaGCTTTCTTTACTTGAACAA +
Preference number: 2 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQTYRAS*LSLLEQ
Trigger: TTGTTCAAGTAAAGAAAGCCATGATGCTCTGTATGT...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR GCA 72 bp TGCCTCAAACAAAGGCTACTTTGTTCCCATCTCTACTaGACCTACACCCACACCCGCCCCGGCCCCCAAGCT +
Preference number: 3 (lower is better)
Translates to: CLKQRLLCSHLY*TYTHTRPGPQA
Trigger: AGCTTGGGGGCCGGGGCGGGTGTGGGTGTAGGTGCAGTAGAGATGGGAACAAAGTAGCCTTTGTTTGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CCA 72 bp ACCAGCTTCGGGCCCTGGAGGAACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGGCATGACAGCGGTCTG +
Preference number: 3 (lower is better)
Translates to: TSFGPWRNYCSS*VRSSVWHDSGL
Trigger: CAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR CAA 90 bp GGCGGCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: GGSVCGHNPLVRMDTHIVCSQLG*PLFCSS
Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR TCA 72 bp TTCCTCACTGGAAAGCAGCGGGGCTTCAGGCCACCATaGGAAACAGCCAGTGGGCCTTTGACTTTACCCAAG +
Preference number: 3 (lower is better)
Translates to: FLTGKQRGFRPP*ETASGPLTLPK
Trigger: CTTGGGTAAAGTCAAAGGCCCACTGGCTGTTTCTCATGGTGGCCTGAAGCCCCGCTGCTTTCCAGTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 72 bp TATGCACATCCTGGTTTTATGGGCAGGGTGCCTTCGTaGCCTCTTACACCTGGAGCTACTGCACTGGTGCGT +
Preference number: 3 (lower is better)
Translates to: YAHPGFMGRVPS*PLTPGATALVR
Trigger: ACGCACCAGTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAACCAGGATGTGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 72 bp GCTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATaGATTAATTCATTCGCCTTCTCCCCCACCCCCTGG +
Preference number: 3 (lower is better)
Translates to: AALCCTYRLLLL*INSFAFSPTPW
Trigger: CCAGGGGGTGGGGGAGAAGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 72 bp ACAATTCCACGTGGCAAAATCAGGGAGATCTTGCGCTaGAAGTGCTGGAACAGCAGCTGGTGGCTAAGAGCC +
Preference number: 3 (lower is better)
Translates to: TIPRGKIREILR*KCWNSSWWLRA
Trigger: GGCTCTTAGCCACCAGCTGCTGTTCCAGCACTTTCAGCGCAAGATCTCCCTGATTTTGCCACGTGGAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR TCA 72 bp GTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTaGCGACAGGCAAGCAAAGGCGATTACCAGTTAACT +
Preference number: 3 (lower is better)
Translates to: VRRTDKCLSSLH*RQASKGDYQLT
Trigger: AGTTAACTGGTAATCGCCTTTGCTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
3UTR GCA 72 bp TGTGTACGTATGCACATCCTGGTTTTATGGGCAGGGTaGCTTCGTGACCTCTTACACCTGGAGCTACTGCAC +
Preference number: 3 (lower is better)
Translates to: CVRMHILVLWAG*LRDLLHLELLH
Trigger: GTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAACCAGGATGTGCATACGTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CCA 72 bp TTTTATGGGCAGGGTGCCTTCGTGACCTCTTACACCTaGAGCTACTGCACTGGTGCGTATGGGAGTAACTAC +
Preference number: 3 (lower is better)
Translates to: FYGQGAFVTSYT*SYCTGAYGSNY
Trigger: GTAGTTACTCCCATACGCACCAGTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CCA 72 bp CACCGATTGTGTGTACGTATGCACATCCTGGTTTTATaGGCAGGGTGCCTTCGTGACCTCTTACACCTGGAG +
Preference number: 3 (lower is better)
Translates to: HRLCVRMHILVL*AGCLRDLLHLE
Trigger: CTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAACCAGGATGTGCATACGTACACACAATCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 72 bp CAGGGTGCCTTCGTGACCTCTTACACCTGGAGCTACTaGACTGGTGCGTATGGGAGTAACTACTTTCATGTT +
Preference number: 3 (lower is better)
Translates to: QGAFVTSYTWSY*TGAYGSNYFHV
Trigger: AACATGAAAGTAGTTACTCCCATACGCACCAGTGCAGTAGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CCA 72 bp CACACCTTTGGGCTGCTAGTCTGCACGACGGTGCTATaGATCCTGCAACTGTGGGCTACTTTAACAAAGCAT +
Preference number: 3 (lower is better)
Translates to: HTFGLLVCTTVL*ILQLWATLTKH
Trigger: ATGCTTTGTTAAAGTAGCCCACAGTTGCAGGATCCATAGCACCGTCGTGCAGACTAGCAGCCCAAAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CCA 72 bp AGAAGTGGAGCTGATGGAGGTGACGGGCCAATGGGGTaGGACCTAAAACTCAGAATGACCTCAGTAATGTCA +
Preference number: 3 (lower is better)
Translates to: RSGADGGDGPMG*DLKLRMTSVMS
Trigger: TGACATTACTGAGGTCATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTCACCTCCATCAGCTCCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR GCA 72 bp TGGGTGCAGCAGAGAGGAGTTCTGGGAAAAGGAGCATaGACGGGACCACAGGACAGAGTATTAATAGAAAAG +
Preference number: 3 (lower is better)
Translates to: WVQQRGVLGKGA*TGPQDRVLIEK
Trigger: CTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAGAACTCCTCTCTGCTGCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CAA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCCCATCAGGTGTGGTGTaGCAAATTTTATGGACACCC +
Preference number: 3 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVPSGVV*QILWTP
Trigger: GGGTGTCCATAAAATTTGCAACACCACACCTGATGG...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCGAGCTGGGGTCTATTTaGTTCACTGAACAATCACTG +
Preference number: 3 (lower is better)
Translates to: QCRQHHGNQKMARPFALAELGSI*FTEQSL
Trigger: CAGTGATTGTTCAGTGAACAAAATAGACCCCAGCTC...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR CCA 72 bp AGGAACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTATTTGTCTGATCAAAGG +
Preference number: 3 (lower is better)
Translates to: RNYCSSWVRSSV*HDSGLYLSDQR
Trigger: CCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR CAA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGGACAAAAAGGCTCTTTaGGTCTTTTGTTTCTTGACA +
Preference number: 3 (lower is better)
Translates to: SPSWTRKQAQISTGAREPDKKAL*VFCFLT
Trigger: TGTCAAGAAACAAAAGACCAAAAGAGCCTTTTTGTC...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR CAA 90 bp GGAGTTCCGTTTGGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGTCCCTCATTGAGCCTTaGCCTCGGACCATGATTTTA +
Preference number: 3 (lower is better)
Translates to: GVPFGMTAVCICLIKGIMSLIEP*PRTMIL
Trigger: TAAAATCATGGTCCGAGGCAAAGGCTCAATGAGGGA...CATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR GCA 72 bp GGCAACAACATTATAATGTGGAATCAACACTGTGGCTaGCCTTTGCTGCACCTATCGCCTCCTTCTACTATG +
Preference number: 3 (lower is better)
Translates to: GNNIIMWNQHCG*PLLHLSPPSTM
Trigger: CATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAGCCACAGTGTTGATTCCACATTATAATGTTGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR CAA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCATGGCTTTCTTTACTaGAACAACGAATTTTCGAGT +
Preference number: 3 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVHGFLY*NNEFSS
Trigger: ACTCGAAAATTCGTTGTTCAAGTAAAGAAAGCCATG...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CAA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCGCTGAGACTAAGCATTaGTTAAATTCAGATCTGATG +
Preference number: 3 (lower is better)
Translates to: QCRQHHGNQKMARPFALAAETKH*LNSDLM
Trigger: CATCAGATCTGAATTTAACAAATGCTTAGTCTCAGC...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAAT +
Preference number: 3 (lower is better)
Translates to: QHHGNQKMARPFALANTFTEVPF*QQDYLN
Trigger: ATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACATGAATTGGGCCTTATaGCTTTACTACTATTCAGTG +
Preference number: 3 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNMNWAL*LYYYSV
Trigger: CACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
3UTR-3UTR CAA 90 bp GCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTCCAAGGACTGTGTTTaGAGAATCACCGATCAAGAC +
Preference number: 3 (lower is better)
Translates to: ASDHDFTSGFCFKLFGCKSKDCV*RITDQD
Trigger: GTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGA...CTTACAGCCAAACAACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR-3UTR CAA 90 bp CTCATTGAGCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTTTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC +
Preference number: 3 (lower is better)
Translates to: LIEPLPRTMILHPVSASSFRCSQ*GLPLFC
Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...ACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGCTCAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR TCA 72 bp AAGCAGCACTTTCCAGCTGCAGTTGGCTTGAGAGGATaGAGCACATGCACTTTTTCCAGTTGGTTTATTGCA +
Preference number: 3 (lower is better)
Translates to: KQHFPAAVGLRG*STCTFSSWFIA
Trigger: TGCAATAAACCAACTGGAAAAAGTGCATGTGCTTCATCCTCTCAAGCCAACTGCAGCTGGAAAGTGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 72 bp ATAGACAAGAACTGCAGAACTAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTAAGGATGGACACGCAT +
Preference number: 3 (lower is better)
Translates to: IDKNCRTKLTSV*GHNPLVRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR GCA 72 bp TGCCAAGTCTTGGCCTCCTACACAGGTGTGTCACCATaGAAGACCATACAGTTCATTACAACTAAAAGGTCA +
Preference number: 3 (lower is better)
Translates to: CQVLASYTGVSP*KTIQFITTKRS
Trigger: TGACCTTTTAGTTGTAATGAACTGTATGGTCTTGCATGGTGACACACCTGTGTAGGAGGCCAAGACTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR GCA 72 bp CTGTGTTTTGAGAATCACCGATCAAGACAAATGCCATaGTCCAACACACCAGTCGGTAATAGTAGTTCACCG +
Preference number: 3 (lower is better)
Translates to: LCFENHRSRQMP*SNTPVGNSSSP
Trigger: CGGTGAACTACTATTACCGACTGGTGTGTTGGAGCATGGCATTTGTCTTGATCGGTGATTCTCAAAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR-3UTR CAA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCTTACTGCAGTGCCTCTaGCTATTTCTAAGCAGTAAA +
Preference number: 3 (lower is better)
Translates to: QHHGNQKMARPFALANTFLLQCL*LFLSSK
Trigger: TTTACTGCTTAGAAATAGCAAGAGGCACTGCAGTAA...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAAT +
Preference number: 3 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNTEVPF*QQDYLN
Trigger: ATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGT...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAATTTTAGCTAAGTACTaGACATGTGCACCCTCATGT +
Preference number: 3 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEILAKY*TCAPSC
Trigger: ACATGAGGGTGCACATGTCAAGTACTTAGCTAAAAT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCTTCCTTAATCAACCTTaGTCACATTCTGCTTCACCA +
Preference number: 3 (lower is better)
Translates to: QHHGNQKMARPFALANTFFLNQP*SHSASP
Trigger: TGGTGAAGCAGAATGTGACAAAGGTTGATTAAGGAA...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAATCATTCCCAATGTCCTaGAGTTGTTCCTTCCTTAAT +
Preference number: 3 (lower is better)
Translates to: WEPENGQAFCTSQHFPVESFPMS*SCSFLN
Trigger: ATTAAGGAAGGAACAACTCAAGGACATTGGGAATGA...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp AATACACCACTAGGTTCAATAGGATACTCAAGGATTGATGTAGCTGGTGCCAATGAACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG +
Preference number: 3 (lower is better)
Translates to: NTPLGSIGYSRIDVAGANELLQQ*GEEFRL
Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTC...ATTGGCACCAGCTACATCAATCCTTGAGTATCCTATTGAACCTAGTGGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR TCA 72 bp CTTCTTACCGTTCGCTTAGGGTGGGATATTAAAAGATaGTCAGTGCTGTGGGATGAATTGGGCCTTATTGCT +
Preference number: 3 (lower is better)
Translates to: LLTVRLGWDIKR*SVLWDELGLIA
Trigger: AGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATATCCCACCCTAAGCGAACGGTAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
3UTR TCA 72 bp CTGTATTCTAGTCCTTCATCCAGCAAGTCAATGGGCTaGAATATCAGGCATGACTGGCATTTCAATCCACTC +
Preference number: 3 (lower is better)
Translates to: LYSSPSSSKSMG*NIRHDWHFNPL
Trigger: GAGTGGATTGAAATGCCAGTCATGCCTGATATTTCAGCCCATTGACTTGCTGGATGAAGGACTAGAATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATTTACTGCAGTGCCTCTaGCTATTTCTAAGCAGTAAA +
Preference number: 3 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNLLQCL*LFLSSK
Trigger: TTTACTGCTTAGAAATAGCAAGAGGCACTGCAGTAA...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CAA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT +
Preference number: 3 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYCGHNP*VRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCAATGAGCATTTCGGTTaGCTGACACTGCATTTTAAA +
Preference number: 3 (lower is better)
Translates to: QHHGNQKMARPFALANTFNEHFG*LTLHFK
Trigger: TTTAAAATGCAGTGTCAGCAAACCGAAATGCTCATT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTTGGTACCATGACAACTaGTATATTAGCAGCTTGACA +
Preference number: 3 (lower is better)
Translates to: LPFAAPIASFYYELIHSPWYHDN*YISSLT
Trigger: TGTCAAGCTGCTAATATACAAGTTGTCATGGTACCA...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 72 bp AGAAAGCGTAGATACTATGGTCCAAGGACTGTGTTTTaGGAATCACCGATCAAGACAAATGCCATGCTCCAA +
Preference number: 3 (lower is better)
Translates to: RKRRYYGPRTVF*ESPIKTNAMLQ
Trigger: TTGGAGCATGGCATTTGTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGACCATAGTATCTACGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR GCA 72 bp AGGATGAAGCACATGCACTTTTTCCAGTTGGTTTATTaGATTTCATGTACGGTCATGCAGTTCTCCGTTCAC +
Preference number: 3 (lower is better)
Translates to: RMKHMHFFQLVY*ISCTVMQFSVH
Trigger: GTGAACGGAGAACTGCATGACCGTACATGAAATGCAATAAACCAACTGGAAAAAGTGCATGTGCTTCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 72 bp AAGGACTGTGTTTTGAGAATCACCGATCAAGACAAATaGCATGCTCCAACACACCAGTCGGTAATAGTAGTT +
Preference number: 3 (lower is better)
Translates to: KDCVLRITDQDK*HAPTHQSVIVV
Trigger: AACTACTATTACCGACTGGTGTGTTGGAGCATGGCATTTGTCTTGATCGGTGATTCTCAAAACACAGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR-3UTR CAA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACATTCTTAGCCTTTCGTaGGGAAAGCCATACCTAAAG +
Preference number: 3 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDILSLS*GKPYLK
Trigger: CTTTAGGTATGGCTTTCCCAACGAAAGGCTAAGAAT...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CAA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACGTGCTGTGGGATGAATaGGGCCTTATTGCTTTACTA +
Preference number: 3 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNVLWDE*GLIALL
Trigger: TAGTAAAGCAATAAGGCCCAATTCATCCCACAGCAC...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR CAA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTTTGGTTAACAGCGTATaGGTACAGTTTTGTCTTCTA +
Preference number: 3 (lower is better)
Translates to: LPFAAPIASFYYELIHSPLVNSV*VQFCLL
Trigger: TAGAAGACAAAACTGTACCAATACGCTGTTAACCAA...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 72 bp TCCACAGTGATTAGTACATGTAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCTCTATTTTGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: STVISTCKSSFR*SQLGLPLFCSS
Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTTACATGTACTAATCACTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR-3UTR CAA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACGTCATCAATGAAGACTaGATGCTAATACCAATCTCC +
Preference number: 3 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDVINED*MLIPIS
Trigger: GGAGATTGGTATTAGCATCAAGTCTTCATTGATGAC...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR-3UTR CAA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACCCGCACCTAGTTAAATaGCAATTACCAAGACAAAGT +
Preference number: 3 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDPHLVK*QLPRQS
Trigger: ACTTTGTCTTGGTAATTGCAATTTAACTAGGTGCGG...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR-3UTR CAA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTCCATCAGGTGTGGTGTaGCAAATTTTATGGACACCC +
Preference number: 3 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFPSGVV*QILWTP
Trigger: GGGTGTCCATAAAATTTGCAACACCACACCTGATGG...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR TCA 72 bp ATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTaGACAATCACTGTTAGTGATGAATACATTAGTTTA +
Preference number: 3 (lower is better)
Translates to: IDDHGAGVYFVH*TITVSDEYISL
Trigger: TAAACTAATGTATTCATCACTAACAGTGATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR TCA 72 bp GTACGGTCATGCAGTTCTCCGTTCACATGTGACCTGTaGACACCTATTTCGACTATATATATATATATACAC +
Preference number: 3 (lower is better)
Translates to: VRSCSSPFTCDL*TPISTIYIYIH
Trigger: GTGTATATATATATATATAGTCGAAATAGGTGTTCACAGGTCACATGTGAACGGAGAACTGCATGACCGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 72 bp AAACGATATCATCTATGTCTGTGTAAGTACACTCTATaGTGTACACCAAATGATGAAACTGCCAGACAAGGC +
Preference number: 3 (lower is better)
Translates to: KRYHLCLCKYTL*CTPNDETARQG
Trigger: GCCTTGTCTGGCAGTTTCATCATTTGGTGTACATCATAGAGTGTACTTACACAGACATAGATGATATCGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR TCA 72 bp ACAAAGAATCAAACTGGTTTCTCCAGGTATATACCATaGCAATGTATCTTTTTACTCGATGCTGTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: TKNQTGFSRYIP*QCIFLLDAVSR
Trigger: TCTGCTCACAGCATCGAGTAAAAAGATACATTGTCATGGTATATACCTGGAGAAACCAGTTTGATTCTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 72 bp TTACATGGTACCATGACAACTTGTATATTAGCAGCTTaGCAGACAGCTTCGAATTTTCACAGACTACTACAT +
Preference number: 3 (lower is better)
Translates to: LHGTMTTCILAA*QTASNFHRLLH
Trigger: ATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAGCTGCTAATATACAAGTTGTCATGGTACCATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR TCA 72 bp ATTTCATGTACGGTCATGCAGTTCTCCGTTCACATGTaGCCTGTGAACACCTATTTCGACTATATATATATA +
Preference number: 3 (lower is better)
Translates to: ISCTVMQFSVHM*PVNTYFDYIYI
Trigger: TATATATATATAGTCGAAATAGGTGTTCACAGGTCACATGTGAACGGAGAACTGCATGACCGTACATGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR GCA 72 bp CAGGTATATACCATGACAATGTATCTTTTTACTCGATaGTGTGAGCAGACAGTGATTATTTTGGAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: QVYTMTMYLFTR*CEQTVIILEKE
Trigger: TTCCTTCTCCAAAATAATCACTGTCTGCTCACAGCATCGAGTAAAAAGATACATTGTCATGGTATATACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR-3UTR CAA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTCATGGCTTTCTTTACTaGAACAACGAATTTTCGAGT +
Preference number: 3 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFHGFLY*NNEFSS
Trigger: ACTCGAAAATTCGTTGTTCAAGTAAAGAAAGCCATG...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR TCA 72 bp TTCTATTTACAAACAACATGGAATTTCTTGGCCTCATaGTACAAAGCGATACTAAACTGTAGTCTAGCAGTG +
Preference number: 3 (lower is better)
Translates to: FYLQTTWNFLAS*YKAILNCSLAV
Trigger: CACTGCTAGACTACAGTTTAGTATCGCTTTGTATCATGAGGCCAAGAAATTCCATGTTGTTTGTAAATAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR TCA 72 bp TTGACAGACAGCTTCGAATTTTCACAGACTACTACATaGACTGTTATGGCAACGGAAACTTTTACAAATAGT +
Preference number: 3 (lower is better)
Translates to: LTDSFEFSQTTT*TVMATETFTNS
Trigger: ACTATTTGTAAAAGTTTCCGTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CCA 72 bp AGAATACCTGGACAGTCTGATTGGTTAACAGCGTATTaGTACAGTTTTGTCTTCTATTACATGTCATTCATT +
Preference number: 3 (lower is better)
Translates to: RIPGQSDWLTAY*YSFVFYYMSFI
Trigger: AATGAATGACATGTAATAGAAGACAAAACTGTACCAATACGCTGTTAACCAATCAGACTGTCCAGGTATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp GGCGGCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGACGCAGGGCAGCTGGTaGGAGAACCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGSVCGHNPLVRMDTHIVTQGSW*ENRRRP
Trigger: GGGCCTGCGCCGGTTCTCCCACCAGCTGCCCTGCGT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361758.8
ENST00000545607.5
CDS-3UTR CCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGACGCAGGGCAGCTGGTaGGAGAACCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSTQGSW*ENRRRP
Trigger: GGGCCTGCGCCGGTTCTCCCACCAGCTGCCCTGCGT...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR CCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGACGCAGGGCAGCTGGTaGGAGAACCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVTQGSW*ENRRRP
Trigger: GGGCCTGCGCCGGTTCTCCCACCAGCTGCCCTGCGT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGTATGGTAGGGCCAGCTaGCGTAGGAGTACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKYGRAS*RRSTQG
Trigger: GCCCTGCGTACTCCTACGCCAGCTGGCCCTACCATA...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp GGCGGCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGGGTGGCGGCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GGSVCGHNPLVRMDTHIVGGGSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGCCGCCACC...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361758.8
ENST00000545607.5
CDS-3UTR CCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAACGCAGGGCAGCTGGTaGGAGAACCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WEPENGQAFCTSQHFPVETQGSW*ENRRRP
Trigger: GGGCCTGCGCCGGTTCTCCCACCAGCTGCCCTGCGT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp CCCTGGAGGAACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTGGCATGACAGCTATGGTAGGGCCAGCTaGCGTAGGAGTACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PWRNYCSSWVRSSVWHDSYGRAS*RRSTQG
Trigger: GCCCTGCGTACTCCTACGCCAGCTGGCCCTACCATA...GCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
3UTR CAA 72 bp GTTGCCGGTGGCGGCTCGGTCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCATATCGTGCCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: VAGGGSVCGHNP*VRMDTHIVPSN
Trigger: GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCCACCGGCAAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361758.8
ENST00000545607.5
CDS-3UTR TCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGCTCAGCTCGCTGCACTaGCGACAGGCAAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSLSSLH*RQASKG
Trigger: GCCTTTGCTTGCCTGTCGTCAGTGCAGCGAGCTGAG...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR GCA 90 bp CCCTGGAGGAACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTGGCATGACAGCGGTGGCGGCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: PWRNYCSSWVRSSVWHDSGGGSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGCCGCCACC...GCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR GCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGAGTGCCTCAGCTCGCTaGACTGACGACAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPSASAR*TDDRQA
Trigger: TGCTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACT...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGACTGTGGCTGCCCTTTaGTGCACCTATCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKTVAAL*CTYRLL
Trigger: AAGGAGGCGATAGGTGCAGCAAAGGGCAGCCACAGT...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTACGCAGGGCAGCTGGTaGGAGAACCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LPFAAPIASFYYELIHSPTQGSW*ENRRRP
Trigger: GGGCCTGCGCCGGTTCTCCCACCAGCTGCCCTGCGT...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGTATGGTAGGGCCAGCTaGCGTAGGAGTACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSYGRAS*RRSTQG
Trigger: GCCCTGCGTACTCCTACGCCAGCTGGCCCTACCATA...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR TCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATCTCAGCTCGCTGCACTaGCGACAGGCAAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDLSSLH*RQASKG
Trigger: GCCTTTGCTTGCCTGTCGTCAGTGCAGCGAGCTGAG...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCGGTGGCGGCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVGGGSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGCCGCCACC...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATTCCTCCTCACTCACTTaGCGGCGGAGTTCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDSSSLT*RRSSPQ
Trigger: CTGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGA...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACTCCTCCTCACTCACTTaGCGGCGGAGTTCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNSSSLT*RRSSPQ
Trigger: CTGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGA...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GGCGGCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGATCCTTGGAGCAGCCTaGGCTGTTGCTGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GGSVCGHNPLVRMDTHIVILGAA*AVAARE
Trigger: TTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGAT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CCA 90 bp GGCGGCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGATCAGCAGGCAGGCATaGTCAGGTCATCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGSVCGHNPLVRMDTHIVISRQA*SGHHWV
Trigger: CACCCAATGATGACCTGACCATGCCTGCCTGCTGAT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGGTGACCTCTTACACCTaGAGCTACTGCACTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPVTSYT*SYCTGA
Trigger: CGCACCAGTGCAGTAGCTCCAGGTGTAAGAGGTCAC...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCGCCGCTCGAGGTGGTTaGAGATCCCGCAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVAARGG*RSRRSW
Trigger: CCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGC...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TATTGCAGCAGTTGGGTGAGGAGTTCCGTTTGGCATGACAGCGGTCTGTATTTGGCCGCTCGAGGTGGTTaGAGATCCCGCAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: YCSSWVRSSVWHDSGLYLAARGG*RSRRSW
Trigger: CCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGC...CAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR TCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGCGATTACCAGTTAACTaGTCAGCAGGCAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKRLPVN*SAGRHG
Trigger: ACCATGCCTGCCTGCTGATCAGTTAACTGGTAATCG...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGGGCAGGGTGCCTTCGTaGCCTCTTACACCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALGRVPS*PLTPGA
Trigger: AGCTCCAGGTGTAAGAGGTCACGAAGGCACCCTGCC...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp GGCGGCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGSVCGHNPLVRMDTHIVAPNWA*LYFAPP
Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361758.8
ENST00000545607.5
CDS-3UTR GCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGCATCCTGGTCAAACATaGAAAACCACTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKHPGQT*KTTPTP
Trigger: TGGGGTGGGAGTGGTTTTGCATGTTTGACCAGGATG...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVSSRSR*LKIPQK
Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKVRSSV*HDSGLY
Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGATCAGCAGGCAGGCATaGTCAGGTCATCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPISRQA*SGHHWV
Trigger: CACCCAATGATGACCTGACCATGCCTGCCTGCTGAT...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGTGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSWAGCS*ASCRSS
Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR TCA 90 bp GGCGGCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCTTTGCCTCGGACCATaGTTTTACATCCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GGSVCGHNPLVRMDTHIVLCLGP*FYIRFL
Trigger: CAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAG...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361758.8
ENST00000545607.5
CDS-3UTR TCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGCAGGTCATCATTGGGTaGAGAGTTCAGAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKQVIIG*RVQRSE
Trigger: TTCTGACCTCTGAACTCTTCACCCAATGATGACCTG...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGCCCTGGAGGAACTATTaGAGCAGTTGGGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSPWRNY*SSWVRS
Trigger: ACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGG...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR GCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGTTTTTAACGTCCTGTTaGTTCACGGGGGACTTTCGG +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKFLTSC*FTGDFR
Trigger: CCGAAAGTCCCCCGTGAAGCAACAGGACGTTAAAAA...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAACGCAGGGCAGCTGGTaGGAGAACCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPTQGSW*ENRRRP
Trigger: GGGCCTGCGCCGGTTCTCCCACCAGCTGCCCTGCGT...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCATATGGTAGGGCCAGCTaGCGTAGGAGTACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAAYGRAS*RRSTQG
Trigger: GCCCTGCGTACTCCTACGCCAGCTGGCCCTACCATA...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGAACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKNYCSS*VRSSVW
Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTT...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp AGCTTCGGGCCCTGGAGGAACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTGGATCCTTGGAGCAGCCTaGGCTGTTGGTGATTTAATG +
Preference number: 4 (lower is better)
Translates to: SFGPWRNYCSSWVRSSVWILGAA*AVGDLM
Trigger: CATTAAATCACCAACAGCCCAGGCTGCTCCAAGGAT...CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR TCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACTGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNWAGCS*ASCRSS
Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR TCA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCCGCTCGAGGTGGTTaGAGATCCCGCAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLAAARGG*RSRRSW
Trigger: CCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGC...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTCTCAGCTCGCTGCACTaGCGACAGGCAAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLALSSLH*RQASKG
Trigger: GCCTTTGCTTGCCTGTCGTCAGTGCAGCGAGCTGAG...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGAACTGCCTCTGTCATTaGGTAGTTAAGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKNCLCH*VVKDHL
Trigger: CAGATGGTCCTTAACTACTCAATGACAGAGGCAGTT...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGCCGAAGGTTCATGCATaGTGCATCATCACACAGTAC +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPPKVHA*CIITQY
Trigger: GTACTGTGTGATGATGCATCATGCATGAACCTTCGG...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACGGGTCCACTGTCACTTaGGATTTGCCACGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNGSTVT*DLPRLV
Trigger: TACCAGACGTGGCAAATCTCAAGTGACAGTGGACCC...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR TCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGGTTGGCTTGAGAGGATaGAGCACATGCACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPVGLRG*STCTFS
Trigger: GGAAAAAGTGCATGTGCTTCATCCTCTCAAGCCAAC...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVASSIS*IFFRLS
Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGTGGCATCTCTGTAGGTaGCATTCAGAATCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPWHLCR*HSESQA
Trigger: AGCTTGCGATTCTGAATGGCACCTACAGAGATGCCA...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACAGCAGCCTGGGCTGTTaGTGCAAGAGAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNSSLGC*CKRKGK
Trigger: CTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGAGCAGCCTGGGCTGTTaGTGCAAGAGAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVSSLGC*CKRKGK
Trigger: CTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCCTGGAGGAACTATTaGAGCAGTTGGGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVPWRNY*SSWVRS
Trigger: ACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGG...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACGGGAGTGTGACGGACTaGGGCGCTCGGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYGSVTD*GARRAW
Trigger: CCAGGCCCGCCGAGCGCCGCAGTCCGTCACACTCCC...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATATCCTTGGAGCAGCCTaGGCTGTTGCTGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDILGAA*AVAARE
Trigger: TTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGAT...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCACCAGCTTCGGGCCCTaGAGGAACTATTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFTSFGP*RNYCSS
Trigger: ACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGT...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATTGGAACAGCAGCTGGTaGCTAAGAGCCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNWNSSW*LRAPAL
Trigger: CAGGGCTGGGGCTCTTAGCCACCAGCTGCTGTTCCA...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR TCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKISALF*ASSTVI
Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp AGCTTCGGGCCCTGGAGGAACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTGGATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT +
Preference number: 4 (lower is better)
Translates to: SFGPWRNYCSSWVRSSVWISALF*ASSTVI
Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR TCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCACTTCCCCATCCCTATaGGACGTGCTCATACAGAAC +
Preference number: 4 (lower is better)
Translates to: QCRQHHGNQKMARPFALATSPSL*DVLIQN
Trigger: GTTCTGTATGAGCACGTCTCATAGGGATGGGGAAGT...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGGGGCAACGGGAGTGTaGCGGACTGCGGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQGATGV*RTAALG
Trigger: GCCGAGCGCCGCAGTCCGTCACACTCCCGTTGCCCC...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR GCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVASSIS*IFFRLS
Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNASSIS*IFFRLS
Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR GCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGTTTCATGTACGGTCATaGAGTTCTCCGTTCACATGT +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKFHVRS*SSPFTC
Trigger: ACATGTGAACGGAGAACTGCATGACCGTACATGAAA...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAACTGCATCAGGTAATCTaGGGTGGGCTTCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: WEPENGQAFCTSQHFPVELHQVI*GGLRLL
Trigger: GAGAAGCCGAAGCCCACCCCAGATTACCTGATGCAG...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp CTCATTGAGCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LIEPLPRTMILHPVSASSSSRSR*LKIPQK
Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...ACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGCTCAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCATCCTTGGAGCAGCCTaGGCTGTTGCTGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFILGAA*AVAARE
Trigger: TTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGAT...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCACCAGCTTCGGGCCCTaGAGGAACTATTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFTSFGP*RNYCSS
Trigger: ACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCAACCAGCTTCGGGCCCTaGAGGAACTATTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAATSFGP*RNYCSS
Trigger: ACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGT...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCTCCTCTGCCAAGTCTTaGCCTCCTACACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVSSAKS*PPTQVC
Trigger: ACACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGA...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGATCAGCAGGCAGGCATaGTCAGGTCATCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALISRQA*SGHHWV
Trigger: CACCCAATGATGACCTGACCATGCCTGCCTGCTGAT...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCTTCTCCCCCACCCCCTaGCAATTAGTGCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFFSPTP*QLVQQK
Trigger: TTTCTGCTGCACTAATTGCCAGGGGGTGGGGGAGAA...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCGTGGAATCAACACTGTaGCTGCCCTTTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFVESTL*LPFAAP
Trigger: AGGTGCAGCAAAGGGCAGCCACAGTGTTGATTCCAC...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CAA 72 bp GAAGGAGTGGTGGGGTGGCGACTAACCAGGGAATACTaGGCTTCAGGGGACCGTTTAATTACTCAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: EGVVGWRLTREY*ASGDRLITQFQ
Trigger: CTGAAACTGAGTAATTAAACGGTCCCCTGAAGCCAAGTATTCCCTGGTTAGTCGCCACCCCACCACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CAA 72 bp GTGAGGAGTTCCGTTTGGCATGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTATGGTAGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VRSSVWHDSGLY*SDQRHYGRASW
Trigger: CCAGCTGGCCCTACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR TCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAATGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEWAGCS*ASCRSS
Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGAGTTTCTCTTGTAACTaGACAATAGGTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPSFSCN*TIGPTA
Trigger: TGCTGTGGGACCTATTGTTCAGTTACAAGAGAAACT...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATCTTTGCCTCGGACCATaGTTTTACATCCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDLCLGP*FYIRFL
Trigger: CAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAG...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCTTTGCCTCGGACCATaGTTTTACATCCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVLCLGP*FYIRFL
Trigger: CAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAG...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFEFRLA*QRSVFV
Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAGGATACTCAAGGATTaGTGTAGCTGGTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSRILKD*CSWCQC
Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTATCCT...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR TCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATCAGGTCATCATTGGGTaGAGAGTTCAGAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDQVIIG*RVQRSE
Trigger: TTCTGACCTCTGAACTCTTCACCCAATGATGACCTG...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGTGGGATATTAAAAGATaGTCAGTGCTGTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKWDIKR*SVLWDE
Trigger: TTCATCCCACAGCACTGATCATCTTTTAATATCCCA...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACTGCCTCTGTCATTaGGTAGTTAAGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSNCLCH*VVKDHL
Trigger: CAGATGGTCCTTAACTACTCAATGACAGAGGCAGTT...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR GCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALASSIS*IFFRLS
Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGACCAACACACATGTCTaGATCTGTTTTGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSTNTHV*ICFEGH
Trigger: GTGCCCTTCAAAACAGATGCAGACATGTGTGTTGGT...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACTGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNWTRIS*LRTLVA
Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR GCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATTGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDWTRIS*LRTLVA
Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAATGGCCAGGCCTTTTaGACTAGCCAACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: QCRQHHGNQKMARPFALANGQAF*TSQHFP
Trigger: TGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATT...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCATCCTTGGAGCAGCCTaGGCTGTTGCTGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFILGAA*AVAARE
Trigger: TTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGAT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCTATGGTAGGGCCAGCTaGCGTAGGAGTACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVYGRAS*RRSTQG
Trigger: GCCCTGCGTACTCCTACGCCAGCTGGCCCTACCATA...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVVRSSV*HDSGLY
Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAAGGGGGACTTTCGGGGTaGGCATCACGTGGCCCGACA +
Preference number: 4 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKGGLSG*ASRGPT
Trigger: TGTCGGGCCACGTGATGCCCACCCCGAAAGTCCCCC...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATTGGTCAGGTCATCATTaGGTGAAGAGTTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDWSGHH*VKSSEV
Trigger: GACCTCTGAACTCTTCACCCAATGATGACCTGACCA...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGACACTATGTTATCTGTaGTCACGTTCTTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKTLCYL*SRSSGL
Trigger: TAACCCTGAAGAACGTGACCACAGATAACATAGTGT...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGTACGTATGCACATCCTaGTTTTATGGGCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALYVCTS*FYGQGA
Trigger: GGCACCCTGCCCATAAAACCAGGATGTGCATACGTA...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGGTCAGATCACCATCCTaGACCAGGAAACAAGCACAG +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALVRSPS*TRKQAQ
Trigger: CTGTGCTTGTTTCCTGGTCCAGGATGGTGATCTGAC...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCGACGGGCCAATGGGGTaGGACCTAAAACTCAGAATG +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFDGPMG*DLKLRM
Trigger: CATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTC...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR CCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGATTTTGCTCCTCATCTaGGTATTCTTTTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKILLLI*VFFYRH
Trigger: GTGCCTGTAAAAGAATACCCAGATGAGGAGCAAAAT...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537883.5
3UTR CAA 72 bp AGTGGCAAGAGAAGAATGCCTCAAACAAAGGCTACTTaGTTCCCATCTCTACTGCACCTACACCCACACCCG +
Preference number: 4 (lower is better)
Translates to: SGKRRMPQTKAT*FPSLLHLHPHP
Trigger: CGGGTGTGGGTGTAGGTGCAGTAGAGATGGGAACAAAGTAGCCTTTGTTTGAGGCATTCTTCTCTTGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGCTTTGCCTCGGACCATaGTTTTACATCCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALLCLGP*FYIRFL
Trigger: CAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAG...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp GACGGGCCAATGGGGTGGGACCTAAAACTCAGAATGACCTCAGTAATGTCAAATGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC +
Preference number: 4 (lower is better)
Translates to: DGPMGWDLKLRMTSVMSNEFRLA*QRSVFV
Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...ATTTGACATTACTGAGGTCATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR TCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAGGATACTCAAGGATTaGTGTAGCTGGTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: QCRQHHGNQKMARPFALARILKD*CSWCQC
Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTATCCT...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGAGGATACTCAAGGATTaGTGTAGCTGGTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVRILKD*CSWCQC
Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTATCCT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATAGGATACTCAAGGATTaGTGTAGCTGGTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDRILKD*CSWCQC
Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTATCCT...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGATCACCTCAAGTGTTTaGGTGTCGCAAATTTATTCA +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKITSSV*VSQIYS
Trigger: TGAATAAATTTGCGACACTCAAACACTTGAGGTGAT...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCTTTTACCCTGGAAGCTaGGATCTTCCCACAATGTGG +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFFYPGS*DLPTMW
Trigger: CCACATTGTGGGAAGATCTCAGCTTCCAGGGTAAAA...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCTTATGTCACCCCTTTTaGGAAGCTGGTTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVLCHPF*EAGLKV
Trigger: GACTTTCAAACCAGCTTCTCAAAAGGGGTGACATAA...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCTGGCATCTCTGTAGGTaGCATTCAGAATCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVWHLCR*HSESQA
Trigger: AGCTTGCGATTCTGAATGGCACCTACAGAGATGCCA...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCTGGCATCTCTGTAGGTaGCATTCAGAATCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFWHLCR*HSESQA
Trigger: AGCTTGCGATTCTGAATGGCACCTACAGAGATGCCA...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGACATATTCACTGAAGTaGCTTTCTTGCAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSTYSLK*LSCSRT
Trigger: AGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGT...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: QCRQHHGNQKMARPFALAKLTSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTT...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCTTAAAAGATGATCAGTaGTGTGGGATGAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVLKDDQ*CGMNWA
Trigger: GGCCCAATTCATCCCACAGCACTGATCATCTTTTAA...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTGCAGCACTTTCCAGCTaGAGTTGGCTTGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LPFAAPIASFYYELIHSPAALSS*SWLERM
Trigger: CATCCTCTCAAGCCAACTGCAGCTGGAAAGTGCTGC...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAACTGCATCAGGTAATCTaGGGTGGGCTTCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKLHQVI*GGLRLL
Trigger: GAGAAGCCGAAGCCCACCCCAGATTACCTGATGCAG...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT +
Preference number: 4 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVLDAPN*ACLYFA
Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGTATGGTAGGGCCAGCTaGCGTAGGAGTACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQYGRAS*RRSTQG
Trigger: GCCCTGCGTACTCCTACGCCAGCTGGCCCTACCATA...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFVRSSV*HDSGLY
Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GTTTGGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGGTAGGGCCGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: VWHDSGLYLSDQRHYGRAVRSSV*HDSGLY
Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...GGCCCTACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGAACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALNYCSS*VRSSVW
Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTT...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTTTCCAGCTGCAGTTaGCTTGAGAGGATGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAALSSCS*LERMKH
Trigger: GTGCTTCATCCTCTCAAGCCAACTGCAGCTGGAAAG...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATTGCACAGTCCAACTATaGAACACTGTAGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDCTVQL*NTVAVC
Trigger: ACAGACTGCTACAGTGTTCCATAGTTGGACTGTGCA...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CAA 72 bp AGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCATATCGTGCCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: RTKLTSVCGHNP*VRMDTHIVPSN
Trigger: GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp GAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCGCCGCTCGAGGTGGTTaGAGATCCCGCAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: ELGLIALLLFSAVSRTTFAARGG*RSRRSW
Trigger: CCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGC...GAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGAGTTTCTCTTGTAACTaGACAATAGGTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVSFSCN*TIGPTA
Trigger: TGCTGTGGGACCTATTGTTCAGTTACAAGAGAAACT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGGAGCATCTTCCACAGTaGTTAGTACATGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPEHLPQ*LVHVNL
Trigger: AAGATTTACATGTACTAATCACTGTGGAAGATGCTC...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDISALF*ASSTVI
Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGAGGATACTCAAGGATTaGTGTAGCTGGTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALRILKD*CSWCQC
Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTATCCT...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCCATTCCCAATGTCCTTaGGTTGTTCCTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: QCRQHHGNQKMARPFALAHSQCP*VVPSLI
Trigger: GATTAAGGAAGGAACAACTCAAGGACATTGGGAATG...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACAGGTCATCATTGGGTaGAGAGTTCAGAGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAAQVIIG*RVQRSE
Trigger: TTCTGACCTCTGAACTCTTCACCCAATGATGACCTG...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGAACTGCCTCTGTCATTaGGTAGTTAAGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALNCLCH*VVKDHL
Trigger: CAGATGGTCCTTAACTACTCAATGACAGAGGCAGTT...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGTTCTCCGTTCACATGTaGCCTGTGAACACCTATTTC +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALFSVHM*PVNTYF
Trigger: GAAATAGGTGTTCACAGGTCACATGTGAACGGAGAA...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGTCCTTTTCTCTGTACTaGCATTTAATGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKSFSLY*HLMCHC
Trigger: ACAATGACACATTAAATGGCAGTACAGAGAAAAGGA...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR GCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGAGCATCAGGCAATTCTaGACTCCTTTTCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVSIRQF*TPFLCT
Trigger: AGTACAGAGAAAAGGAGTGCAGAATTGCCTGATGCT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GTTTGGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGGTAGGGCCTGGCATCTCTGTAGGTaGCATTCAGAATCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: VWHDSGLYLSDQRHYGRAWHLCR*HSESQA
Trigger: AGCTTGCGATTCTGAATGGCACCTACAGAGATGCCA...GGCCCTACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR GCA 90 bp GATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTCCTCTAGGTCCCCCTGGAGGAACTATTaGAGCAGTTGGGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DFTSGFCFKLFGCKSSRSPWRNY*SSWVRS
Trigger: ACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGG...GGACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGAAACCGGATGTAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR GCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCGGGCACCTGAGTGCATaGACACACACAGATAACATA +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFGHLSA*THTDNI
Trigger: TATGTTATCTGTGTGTGTGCATGCACTCAGGTGCCC...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCTGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFWTRIS*LRTLVA
Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCACAGGTGTGTCACCATaGAAGACCATACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: QCRQHHGNQKMARPFALATGVSP*KTIQFI
Trigger: AATGAACTGTATGGTCTTGCATGGTGACACACCTGT...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGACCTTTGTCACATTCTaGTTCACCAAACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVTFVTF*FTKLGP
Trigger: TGGACCAAGTTTGGTGAAGCAGAATGTGACAAAGGT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCAATGGCCAGGCCTTTTaGACTAGCCAACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFNGQAF*TSQHFP
Trigger: TGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAAGTGCCTCAGCTCGCTaGACTGACGACAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPSASAR*TDDRQA
Trigger: TGCTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACT...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTAATCAACACTGTGGCTaGCCTTTGCTGCACCTATCG +
Preference number: 4 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLANQHCG*PLLHLS
Trigger: CGATAGGTGCAGCAAAGGGCAGCCACAGTGTTGATT...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATTCTCATATTGATACATaGATTTTCTGGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDSHIDT*IFWGWR
Trigger: CCTCCACCCCCAGAAAATGCATGTATCAATATGAGA...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNSSRSR*LKIPQK
Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSSSRSR*LKIPQK
Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp GCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCAACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: AFASDHDFTSGFCFKLFGNYCSS*VRSSVW
Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTT...GCCAAACAACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CCA 90 bp ATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTCCTCTAGGTCCAACCAGCTTCGGGCCCTaGAGGAACTATTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ILHPVSASSCLAVSPLGPTSFGP*RNYCSS
Trigger: ACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGT...TGGACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGAAACCGGATGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATTGGAACAGCAGCTGGTaGCTAAGAGCCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNWNSSW*LRAPAL
Trigger: CAGGGCTGGGGCTCTTAGCCACCAGCTGCTGTTCCA...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATTGCTGGAACAGCAGCTaGTGGCTAAGAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNCWNSS*WLRAPA
Trigger: GGCTGGGGCTCTTAGCCACCAGCTGCTGTTCCAGCA...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCATGCTGAAAGGCAAGTaGCAAGAGAAGAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFMLKGK*QEKNAS
Trigger: TGAGGCATTCTTCTCTTGCCACTTGCCTTTCAGCAT...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCATGCATTTTCTGGGGGTaGAGGATAAGCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAACIFWG*RISSTF
Trigger: GAAAGTGCTGCTTATCCTCCACCCCCAGAAAATGCA...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGGATGAAATCAAGTTTTaGTCAGCATTCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKDEIKF*SAFLSS
Trigger: AGAAGAAAGGAATGCTGACCAAAACTTGATTTCATC...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTAACCAAACACACCTTTaGGCTGCTAGTCTGCACGAC +
Preference number: 4 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLANQTHL*AASLHD
Trigger: GTCGTGCAGACTAGCAGCCCAAAGGTGTGTTTGGTT...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTGCCGCTCGAGGTGGTTaGAGATCCCGCAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFAARGG*RSRRSW
Trigger: CCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGC...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT +
Preference number: 4 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFISALF*ASSTVI
Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp CCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC +
Preference number: 4 (lower is better)
Translates to: PRTMILHPVSASSCLAVSEFRLA*QRSVFV
Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...ACTTACAGCCAAACAACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR TCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCAAGGATACTCAAGGATTaGTGTAGCTGGTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAARILKD*CSWCQC
Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTATCCT...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATATTCAGAGAGAGCTTTaGCTTCGCTATGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDIQREL*LRYEKK
Trigger: TTTCTTCTCATAGCGAAGTCAAAGCTCTCTCTGAAT...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTCCGAAGGTTCATGCATaGTGCATCATCACACAGTAC +
Preference number: 4 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLAPKVHA*CIITQY
Trigger: GTACTGTGTGATGATGCATCATGCATGAACCTTCGG...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTGGCTTCAGGCCACCATaGGAAACAGCCAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLGFRPP*ETASGP
Trigger: AGGCCCACTGGCTGTTTCTCATGGTGGCCTGAAGCC...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGCGCCTCCTTCTACTATaGATTAATTCATTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALRLLLL*INSFAF
Trigger: GAAGGCGAATGAATTAATTCATAGTAGAAGGAGGCG...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp ATATCGTGCCTTCGAACTTTAGTAGCCACCGCACCTAATACACCACTAGGTTCAAGCCTGGGCTGTTGGTaGTTTAATGTTGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ISCLRTLVATAPNTPLGSSLGCW*FNVGIS
Trigger: AGAGATGCCAACATTAAATCACCAACAGCCCAGGCT...TGAACCTAGTGGTGTATTAGGTGCGGTGGCTACTAAAGTTCGAAGGCACGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR TCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACATCTCAAATAAAGTTTaGGAAGTGGAGCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNISNKV*EVELME
Trigger: CTCCATCAGCTCCACTTCTCAAACTTTATTTGAGAT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR GCA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKAPNWA*LYFAPP
Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDKSSFR*SQLGLP
Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTT...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCCTGGGAAAAGGAGCATaGACGGGACCACAGGACAGA +
Preference number: 4 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSLGKGA*TGPQDR
Trigger: TCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATCTCCTCGGGAACAGATaGTGTGGGTGCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANLLGNR*CGCSRE
Trigger: CTCTCTGCTGCACCCACAGCATCTGTTCCCGAGGAG...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACATATTCACTGAAGTaGCTTTCTTGCAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALTYSLK*LSCSRT
Trigger: AGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGT...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR GCA 90 bp ATATCGTGCCTTCGAACTTTAGTAGCCACCGCACCTAATACACCACTAGGTTCATGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: ISCLRTLVATAPNTPLGSWTRIS*LRTLVA
Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...TGAACCTAGTGGTGTATTAGGTGCGGTGGCTACTAAAGTTCGAAGGCACGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR GCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFKLTSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCAAGTGCCTCAGCTCGCTaGACTGACGACAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSSASAR*TDDRQA
Trigger: TGCTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACT...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp TGTGTTTTGAGAATCACCGATCAAGACAAATGCCATGCTCCAACACACCAGTCGACCGATCAAGACAAATaGCATGCTCCAACACACCAG +
Preference number: 4 (lower is better)
Translates to: CVLRITDQDKCHAPTHQSTDQDK*HAPTHQ
Trigger: CTGGTGTGTTGGAGCATGGCATTTGTCTTGATCGGT...CGACTGGTGTGTTGGAGCATGGCATTTGTCTTGATCGGTGATTCTCAAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR CCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTGCATCAGGTAATCTaGGGTGGGCTTCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPLHQVI*GGLRLL
Trigger: GAGAAGCCGAAGCCCACCCCAGATTACCTGATGCAG...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNSSRSR*LKIPQK
Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYSSRSR*LKIPQK
Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACATCCTTGGAGCAGCCTaGGCTGTTGCTGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDILGAA*AVAARE
Trigger: TTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGAT...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATGGTAGGGCCAGCTaGCGTAGGAGTACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYYGRAS*RRSTQG
Trigger: GCCCTGCGTACTCCTACGCCAGCTGGCCCTACCATA...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCCAACATGGAATTTCTTaGCCTCATGATACAAAGCGA +
Preference number: 4 (lower is better)
Translates to: QCRQHHGNQKMARPFALAQHGIS*PHDTKR
Trigger: TCGCTTTGTATCATGAGGCCAAGAAATTCCATGTTG...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGTCTTTGTCTTTTGTTTaGTTAGATGGTAAGACGAAC +
Preference number: 4 (lower is better)
Translates to: SPSWTRKQAQISTGAREPSLSFV*LDGKTN
Trigger: GTTCGTCTTACCATCTAACCAAACAAAAGACAAAGA...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGTGCACGACGGTGCTATaGATCCTGCAACTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NAVTATSYQGIKTGITSWCTTVL*ILQLWA
Trigger: AGCCCACAGTTGCAGGATCCATAGCACCGTCGTGCA...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp CCAGAAAGCGTAGATACTATGGTCCAAGGACTGTGTTTTGAGAATCACCGATCACTTTGCCTCGGACCATaGTTTTACATCCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PESVDTMVQGLCFENHRSLCLGP*FYIRFL
Trigger: CAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAG...TGATCGGTGATTCTCAAAACACAGTCCTTGGACCATAGTATCTACGCTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR TCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACGAGCATCTTCCACAGTaGTTAGTACATGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNEHLPQ*LVHVNL
Trigger: AAGATTTACATGTACTAATCACTGTGGAAGATGCTC...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR TCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACAAATGTATTTGTTCATaGAACAAAGGGCACCTGAGT +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNKCICS*NKGHLS
Trigger: ACTCAGGTGCCCTTTGTTTCATGAACAAATACATTT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR TCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCATTCCCAATGTCCTTaGGTTGTTCCTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFHSQCP*VVPSLI
Trigger: GATTAAGGAAGGAACAACTCAAGGACATTGGGAATG...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGTGGGATATTAAAAGATaGTCAGTGCTGTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALWDIKR*SVLWDE
Trigger: TTCATCCCACAGCACTGATCATCTTTTAATATCCCA...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGATTCAGAGAGAGCTTTaGCTTCGCTATGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALIQREL*LRYEKK
Trigger: TTTCTTCTCATAGCGAAGTCAAAGCTCTCTCTGAAT...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAGGGTCCACTGTCACTTaGGATTTGCCACGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPGSTVT*DLPRLV
Trigger: TACCAGACGTGGCAAATCTCAAGTGACAGTGGACCC...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATTTAGGCTGTCACACGTaGAAGTGTTATGACATATAT +
Preference number: 4 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDLGCHT*KCYDIY
Trigger: ATATATGTCATAACACTTTCACGTGTGACAGCCTAA...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp TATTCACACAGCTGGATCTCATACCACCACAGAACTTCAAGAGACAGTTTACCTGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YSHSWISYHHRTSRDSLPAPNWA*LYFAPP
Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...AGGTAAACTGTCTCTTGAAGTTCTGTGGTGGTATGAGATCCAGCTGTGTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAAGCAGCCTGGGCTGTTaGTGCAAGAGAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPSSLGC*CKRKGK
Trigger: CTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCT...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACCCTGGAGGAACTATTaGAGCAGTTGGGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPPWRNY*SSWVRS
Trigger: ACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGG...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAGGGCACCTGAGTGCATaGACACACACAGATAACATA +
Preference number: 4 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKGHLSA*THTDNI
Trigger: TATGTTATCTGTGTGTGTGCATGCACTCAGGTGCCC...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCACCTTTGTCACATTCTaGTTCACCAAACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFTFVTF*FTKLGP
Trigger: TGGACCAAGTTTGGTGAAGCAGAATGTGACAAAGGT...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTGGTGGCGGCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLGGGSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGCCGCCACC...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGGCTTTGCACACAAATTaGTTCAACTACATAACTAAC +
Preference number: 4 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSALHTN*FNYITN
Trigger: GTTAGTTATGTAGTTGAAGCAATTTGTGTGCAAAGC...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR GCA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGGCTTGCCTCTATTTTaGTCCTCATCTGGGTATTCT +
Preference number: 4 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLAGLPLF*SSSGYS
Trigger: AGAATACCCAGATGAGGAGCAAAATAGAGGCAAGCC...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537883.5
CDS-3UTR CCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCTCCTCCTCACTCACTTaGCGGCGGAGTTCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSSSSLT*RRSSPQ
Trigger: CTGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGA...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAATCCTCCTCACTCACTTaGCGGCGGAGTTCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQSSSLT*RRSSPQ
Trigger: CTGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGA...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATTCAGGTAATCTGGGGTaGGCTTCGGCTTCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANSGNLG*ASASPS
Trigger: CGAAGGAGAAGCCGAAGCCCACCCCAGATTACCTGA...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT +
Preference number: 4 (lower is better)
Translates to: QHHGNQKMARPFALANTFLDAPN*ACLYFA
Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDVRSSV*HDSGLY
Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATACCAGCTTCGGGCCCTaGAGGAACTATTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNTSFGP*RNYCSS
Trigger: ACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACACCAGCTTCGGGCCCTaGAGGAACTATTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYTSFGP*RNYCSS
Trigger: ACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGT...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGAGCAGAGAGGAGTTCTaGGAAAAGGAGCATGCACGG +
Preference number: 4 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQSREEF*EKEHAR
Trigger: CCGTGCATGCTCCTTTTCCCAGAACTCCTCTCTGCT...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTATGAGAAACAGCCAGTaGGCCTTTGACTTTACCCAA +
Preference number: 4 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLAMRNSQ*AFDFTQ
Trigger: TTGGGTAAAGTCAAAGGCCCACTGGCTGTTTCTCAT...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACACATCCTGGTTTTATaGGCAGGGTGCCTTCGTGAC +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPHILVL*AGCLRD
Trigger: GTCACGAAGGCACCCTGCCCATAAAACCAGGATGTG...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCAGATCTTCCCACAATGTaGTGTCTTTTGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAADLPTM*CLLPRR
Trigger: TCTTCTTGGCAAAAGACACCACATTGTGGGAAGATC...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACAATATCAGGCATGACTaGCATTTCAATCCACTCTAT +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNNIRHD*HFNPLY
Trigger: ATAGAGTGGATTGAAATGCCAGTCATGCCTGATATT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR TCA 90 bp GAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCTGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: ELGLIALLLFSAVSRTTFWAGCS*ASCRSS
Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...GAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACCTTTGCCTCGGACCATaGTTTTACATCCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDLCLGP*FYIRFL
Trigger: CAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAG...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCAATTTCTTGGCCTCATaGTACAAAGCGATACTAAAC +
Preference number: 4 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVNFLAS*YKAILN
Trigger: GTTTAGTATCGCTTTGTATCATGAGGCCAAGAAATT...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACCGATTACCAGTTAACTaGTCAGCAGGCAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNRLPVN*SAGRHG
Trigger: ACCATGCCTGCCTGCTGATCAGTTAACTGGTAATCG...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACGATTACCAGTTAACTaGTCAGCAGGCAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPRLPVN*SAGRHG
Trigger: ACCATGCCTGCCTGCTGATCAGTTAACTGGTAATCG...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAAGCTCAGTAACGTGCTaGGGGTTCTTTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPSSVTC*GFFSSL
Trigger: CAGTGAGGAAAAGAACCCTCAGCACGTTACTGAGCT...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCATTTTTGGGGAAGATATaGTGCCAAACTTACCATGAC +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAAFLGKI*CQTYHD
Trigger: GTCATGGTAAGTTTGGCATCATATCTTCCCCAAAAA...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPAPNWA*LYFAPP
Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR GCA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQASSIS*IFFRLS
Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNASSIS*IFFRLS
Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSASSIS*IFFRLS
Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAAAGCAGCCTGGGCTGTTaGTGCAAGAGAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKSSLGC*CKRKGK
Trigger: CTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCT...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATCCCTGGAGGAACTATTaGAGCAGTTGGGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNPWRNY*SSWVRS
Trigger: ACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGG...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATACATATTCACTGAAGTaGCTTTCTTGCAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNTYSLK*LSCSRT
Trigger: AGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGT...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATCATCAGGTGTGGTGTTaGAAATTTTATGGACACCCA +
Preference number: 4 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNHQVWC*KFYGHP
Trigger: TGGGTGTCCATAAAATTTGCAACACCACACCTGATG...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCCCGTTCAATTCATTTTaGAATACCAACCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: QCRQHHGNQKMARPFALAPFNSF*NTNPKF
Trigger: AAATTTGGGGTTGGTATTGCAAAATGAATTGAACGG...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp TATTCACACAGCTGGATCTCATACCACCACAGAACTTCAAGAGACAGTTTACCTAATGGCCAGGCCTTTTaGACTAGCCAACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: YSHSWISYHHRTSRDSLPNGQAF*TSQHFP
Trigger: TGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATT...AGGTAAACTGTCTCTTGAAGTTCTGTGGTGGTATGAGATCCAGCTGTGTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGATTGTGTGTACGTATaGACATCCTGGTTTTATGGG +
Preference number: 4 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLADCVYV*TSWFYG
Trigger: CCCATAAAACCAGGATGTGCATACGTACACACAATC...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTCAATGTGGTGTCTTTTaGCAAGAAGAGGCAACAACA +
Preference number: 4 (lower is better)
Translates to: LPFAAPIASFYYELIHSPQCGVF*QEEATT
Trigger: TGTTGTTGCCTCTTCTTGGCAAAAGACACCACATTG...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCATTTGGGCTGCTAGTCTaGACGACGGTGCTATGGATC +
Preference number: 4 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSFGLLV*TTVLWI
Trigger: GATCCATAGCACCGTCGTGCAGACTAGCAGCCCAAA...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTCTGCATCAGGTAATCTaGGGTGGGCTTCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLLHQVI*GGLRLL
Trigger: GAGAAGCCGAAGCCCACCCCAGATTACCTGATGCAG...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CCA 90 bp GGAGTTCCGTTTGGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT +
Preference number: 4 (lower is better)
Translates to: GVPFGMTAVCICLIKGIMLDAPN*ACLYFA
Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...CATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACACCAGCTTCGGGCCCTaGAGGAACTATTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYTSFGP*RNYCSS
Trigger: ACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGT...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGTCTGAGTTCTCCAAGTaGTCAATATCATGTTTTACT +
Preference number: 4 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVSEFSK*SISCFT
Trigger: AGTAAAACATGATATTGACCACTTGGAGAACTCAGA...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACTCATTTCAAACATCTTaGGCCTTAACCTATTGTATC +
Preference number: 4 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNSFQTS*ALTYCI
Trigger: GATACAATAGGTTAAGGCCCAAGATGTTTGAAATGA...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GACGGGCCAATGGGGTGGGACCTAAAACTCAGAATGACCTCAGTAATGTCAAATTTATATTCACACAGCTaGATCTCATACCACCACAGA +
Preference number: 4 (lower is better)
Translates to: DGPMGWDLKLRMTSVMSNLYSHS*ISYHHR
Trigger: TCTGTGGTGGTATGAGATCCAGCTGTGTGAATATAA...ATTTGACATTACTGAGGTCATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR CCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACTCCTCTGCCAAGTCTTaGCCTCCTACACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYSSAKS*PPTQVC
Trigger: ACACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGA...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAACAACATGGAATTTCTTaGCCTCATGATACAAAGCGA +
Preference number: 4 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEQHGIS*PHDTKR
Trigger: TCGCTTTGTATCATGAGGCCAAGAAATTCCATGTTG...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACGAAGGAGTGGTGGGGTaGCGACTAACCAGGGAATAC +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYEGVVG*RLTREY
Trigger: GTATTCCCTGGTTAGTCGCCACCCCACCACTCCTTC...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYWAGCS*ASCRSS
Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR TCA 90 bp TTCCCAGAAAGCGTAGATACTATGGTCCAAGGACTGTGTTTTGAGAATCACCGAAGTTTCTCTTGTAACTaGACAATAGGTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: FPESVDTMVQGLCFENHRSFSCN*TIGPTA
Trigger: TGCTGTGGGACCTATTGTTCAGTTACAAGAGAAACT...TCGGTGATTCTCAAAACACAGTCCTTGGACCATAGTATCTACGCTTTCTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR TCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNEFRLA*QRSVFV
Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCAATCACCTCAAGTGTTTaGGTGTCGCAAATTTATTCA +
Preference number: 4 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAAITSSV*VSQIYS
Trigger: TGAATAAATTTGCGACACTCAAACACTTGAGGTGAT...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR GCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNAPNWA*LYFAPP
Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTAGCAGCCTGGGCTGTTaGTGCAAGAGAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFSSLGC*CKRKGK
Trigger: CTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCT...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTAGCAGCCTGGGCTGTTaGTGCAAGAGAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLSSLGC*CKRKGK
Trigger: CTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCT...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTCCCTGGAGGAACTATTaGAGCAGTTGGGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLPWRNY*SSWVRS
Trigger: ACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGG...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCCTGGGAAAAGGAGCATaGACGGGACCACAGGACAGA +
Preference number: 4 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSLGKGA*TGPQDR
Trigger: TCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACTGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNWTRIS*LRTLVA
Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGGCTTTGCACACAAATTaGTTCAACTACATAACTAAC +
Preference number: 4 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALALHTN*FNYITN
Trigger: GTTAGTTATGTAGTTGAAGCAATTTGTGTGCAAAGC...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR GCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTACACCTGGAGCTACTaGACTGGTGCGTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYYTWSY*TGAYGS
Trigger: ACTCCCATACGCACCAGTGCAGTAGCTCCAGGTGTA...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAAGTTTTATGGGCAGGGTaGCTTCGTGACCTCTTACAC +
Preference number: 4 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKVLWAG*LRDLLH
Trigger: GTGTAAGAGGTCACGAAGGCACCCTGCCCATAAAAC...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp ATGATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTCCTCTAGGTTCAAGACAAATGCCATaGTCCAACACACCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: MILHPVSASSCLAVSPLGSRQMP*SNTPVG
Trigger: ACCGACTGGTGTGTTGGAGCATGGCATTTGTCTTGA...ACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGAAACCGGATGTAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAACTGCATCAGGTAATCTaGGGTGGGCTTCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQLHQVI*GGLRLL
Trigger: GAGAAGCCGAAGCCCACCCCAGATTACCTGATGCAG...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATATCCTTGGAGCAGCCTaGGCTGTTGCTGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYILGAA*AVAARE
Trigger: TTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGAT...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAAGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKVRSSV*HDSGLY
Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACCATCCAGCAAGTCAATaGGCTGAAATATCAGGCATG +
Preference number: 4 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDHPASQ*AEISGM
Trigger: CATGCCTGATATTTCAGCCCATTGACTTGCTGGATG...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTAGCAGAGAGGAGTTCTaGGAAAAGGAGCATGCACGG +
Preference number: 4 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFSREEF*EKEHAR
Trigger: CCGTGCATGCTCCTTTTCCCAGAACTCCTCTCTGCT...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATAAGTACAATTCCACGTaGCAAAATCAGGGAGATCTT +
Preference number: 4 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNKYNST*QNQGDL
Trigger: AAGATCTCCCTGATTTTGCCACGTGGAATTGTACTT...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCTCATTTCAAACATCTTaGGCCTTAACCTATTGTATC +
Preference number: 4 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVSFQTS*ALTYCI
Trigger: GATACAATAGGTTAAGGCCCAAGATGTTTGAAATGA...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATAGACGACCACGGAGCTaGGGTCTATTTTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANRRPRS*GLFCSL
Trigger: CAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCT...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAGACGACCACGGAGCTaGGGTCTATTTTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNRRPRS*GLFCSL
Trigger: CAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp CTCATTGAGCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTAATAGTAGTTCACCGTaGCAAGAAGTCACAAATCTG +
Preference number: 4 (lower is better)
Translates to: LIEPLPRTMILHPVSASSNSSSP*QEVTNL
Trigger: CAGATTTGTGACTTCTTGCCACGGTGAACTACTATT...ACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGCTCAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR CAA 72 bp GAGGACTGTGCTGAGGTTAACCAGTTTGATTCCACATaGAAGGCACGAGTGCATATAATGTTGGTAAATCTC +
Preference number: 4 (lower is better)
Translates to: EDCAEVNQFDST*KARVHIMLVNL
Trigger: GAGATTTACCAACATTATATGCACTCGTGCCTTCAATGTGGAATCAAACTGGTTAACCTCAGCACAGTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CAA 72 bp TGGCTTGAGAGGATGAAGCACATGCACTTTTTCCAGTaGGTTTATTGCATTTCATGTACGGTCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: WLERMKHMHFFQ*VYCISCTVMQF
Trigger: GAACTGCATGACCGTACATGAAATGCAATAAACCAACTGGAAAAAGTGCATGTGCTTCATCCTCTCAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATCTTTGCCTCGGACCATaGTTTTACATCCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANLCLGP*FYIRFL
Trigger: CAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAG...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp ACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTCCTCTAGGTCCAAGGATGAGCATCTTCCACAGTaGTTAGTACATGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: TSGFCFKLFGCKSSRSKDEHLPQ*LVHVNL
Trigger: AAGATTTACATGTACTAATCACTGTGGAAGATGCTC...ATCCTTGGACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGAAACCGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR TCA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT +
Preference number: 4 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDISALF*ASSTVI
Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYEFRLA*QRSVFV
Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC +
Preference number: 4 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYEFRLA*QRSVFV
Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATAGCAAGTCAATGGGCTaGAATATCAGGCATGACTGG +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANSKSMG*NIRHDW
Trigger: CCAGTCATGCCTGATATTTCAGCCCATTGACTTGCT...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYAPNWA*LYFAPP
Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR GCA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKKSSFR*SQLGLP
Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTT...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp TATTCACACAGCTGGATCTCATACCACCACAGAACTTCAAGAGACAGTTTACCTCATCCCTATGAGACGTaGTCATACAGAACACTTACA +
Preference number: 4 (lower is better)
Translates to: YSHSWISYHHRTSRDSLPHPYET*SYRTLT
Trigger: TGTAAGTGTTCTGTATGAGCACGTCTCATAGGGATG...AGGTAAACTGTCTCTTGAAGTTCTGTGGTGGTATGAGATCCAGCTGTGTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCACCTTTGTCACATTCTaGTTCACCAAACTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVTFVTF*FTKLGP
Trigger: TGGACCAAGTTTGGTGAAGCAGAATGTGACAAAGGT...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp GAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ELGLIALLLFSAVSRTTFAPNWA*LYFAPH
Trigger: ATGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...GAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537883.5
CDS-3UTR CCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLVRSSV*HDSGLY
Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp GACGGGCCAATGGGGTGGGACCTAAAACTCAGAATGACCTCAGTAATGTCAAATTTTTTCCATCAGGTGTaGTGTTGCAAATTTTATGGA +
Preference number: 4 (lower is better)
Translates to: DGPMGWDLKLRMTSVMSNFFHQV*CCKFYG
Trigger: TCCATAAAATTTGCAACACCACACCTGATGGAAAAA...ATTTGACATTACTGAGGTCATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR CCA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAATTATATTCACACAGCTaGATCTCATACCACCACAGA +
Preference number: 4 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKLYSHS*ISYHHR
Trigger: TCTGTGGTGGTATGAGATCCAGCTGTGTGAATATAA...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAATCCTCTGCCAAGTCTTaGCCTCCTACACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQSSAKS*PPTQVC
Trigger: ACACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGA...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCTGGTCAGGTCATCATTaGGTGAAGAGTTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: ELGLIALLLFSAVSRTTFWSGHH*VKSSEV
Trigger: GACCTCTGAACTCTTCACCCAATGATGACCTGACCA...GAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGACAGGCATCACATCCTaGTCAAACATGCAAAACCAC +
Preference number: 4 (lower is better)
Translates to: NAVTATSYQGIKTGITSWTGITS*SNMQNH
Trigger: GTGGTTTTGCATGTTTGACCAGGATGTGATGCCTGT...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTAACAACATTATAATGTaGAATCAACACTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPFAAPIASFYYELIHSPNNIIM*NQHCGC
Trigger: GCAGCCACAGTGTTGATTCCACATTATAATGTTGTT...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CTCATTGAGCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTAAGAAGTCACAAATCTaGGTATTCTTTTACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LIEPLPRTMILHPVSASSKKSQI*VFFYRH
Trigger: GTGCCTGTAAAAGAATACCCAGATTTGTGACTTCTT...ACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGCTCAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545346.1
3UTR CAA 72 bp AGAATACAACTACAGTCATGCCTGCATAACAACATTTaGGTCAACAACGGACCACTTATACTATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RIQLQSCLHNNI*VNNGPLILCGP
Trigger: GGGACCACATAGTATAAGTGGTCCGTTGTTGACCAAAATGTTGTTATGCAGGCATGACTGTAGTTGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR TCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAAGTTTCTCTTGTAACTaGACAATAGGTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPSFSCN*TIGPTA
Trigger: TGCTGTGGGACCTATTGTTCAGTTACAAGAGAAACT...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATAGCAAGTCAATGGGCTaGAATATCAGGCATGACTGG +
Preference number: 4 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYSKSMG*NIRHDW
Trigger: CCAGTCATGCCTGATATTTCAGCCCATTGACTTGCT...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR TCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAACTTCCCCATCCCTATaGGACGTGCTCATACAGAAC +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQTSPSL*DVLIQN
Trigger: GTTCTGTATGAGCACGTCTCATAGGGATGGGGAAGT...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCAATCAGTGCTGTGGGATaGATTGGGCCTTATTGCTTT +
Preference number: 4 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSISAVG*IGPYCF
Trigger: AAAGCAATAAGGCCCAATTCATCCCACAGCACTGAT...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAGCTGTGAGCAGACAGTaGTTATTTTGGAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPAVSRQ*LFWRRK
Trigger: TTTCCTTCTCCAAAATAATCACTGTCTGCTCACAGC...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCACACCAACTTCTTGACTaGAAGCTCAGCTTTCAACTG +
Preference number: 4 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSHQLLD*KLSFQL
Trigger: CAGTTGAAAGCTGAGCTTTCAGTCAAGAAGTTGGTG...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGTTTGAGAAGCTGGTTTaGAAGTCAGATCACCATCCT +
Preference number: 4 (lower is better)
Translates to: NAVTATSYQGIKTGITSWFEKLV*KSDHHP
Trigger: AGGATGGTGATCTGACTTTCAAACCAGCTTCTCAAA...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGAGCATCAGGCAATTCTaGACTCCTTTTCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: NAVTATSYQGIKTGITSWSIRQF*TPFLCT
Trigger: AGTACAGAGAAAAGGAGTGCAGAATTGCCTGATGCT...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAAGCATCAGGCAATTCTaGACTCCTTTTCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPSIRQF*TPFLCT
Trigger: AGTACAGAGAAAAGGAGTGCAGAATTGCCTGATGCT...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR GCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATTGGCATCTCTGTAGGTaGCATTCAGAATCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYWHLCR*HSESQA
Trigger: AGCTTGCGATTCTGAATGGCACCTACAGAGATGCCA...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAGTCAACAGCATGCATaGAGCACCAAGGTCATATAC +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNSQQHA*STKVIY
Trigger: GTATATGACCTTGGTGCTGCATGCATGCTGTTGACT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAAAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKKLTSV*GHNPLV
Trigger: TACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTT...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCACAGGTGTGTCACCATaGAAGACCATACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSTGVSP*KTIQFI
Trigger: AATGAACTGTATGGTCTTGCATGGTGACACACCTGT...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACGTGGCAAGAGAAGAATaGCTCAAACAAAGGCTACTT +
Preference number: 4 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNVAREE*LKQRLL
Trigger: AAGTAGCCTTTGTTTGAGGCATTCTTCTCTTGCCAC...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT +
Preference number: 4 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNLDAPN*ACLYFA
Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATAACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYNYCSS*VRSSVW
Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTT...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAAGACGACCACGGAGCTaGGGTCTATTTTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQRRPRS*GLFCSL
Trigger: CAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCT...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp TATTCACACAGCTGGATCTCATACCACCACAGAACTTCAAGAGACAGTTTACCTCAACATGGAATTTCTTaGCCTCATGATACAAAGCGA +
Preference number: 4 (lower is better)
Translates to: YSHSWISYHHRTSRDSLPQHGIS*PHDTKR
Trigger: TCGCTTTGTATCATGAGGCCAAGAAATTCCATGTTG...AGGTAAACTGTCTCTTGAAGTTCTGTGGTGGTATGAGATCCAGCTGTGTGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTGGTCAGGTCATCATTaGGTGAAGAGTTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYWSGHH*VKSSEV
Trigger: GACCTCTGAACTCTTCACCCAATGATGACCTGACCA...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTGATACATGCATTTTCTaGGGGTGGAGGATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLDTCIF*GWRISS
Trigger: GCTGCTTATCCTCCACCCCCAGAAAATGCATGTATC...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATAGTTTCTCTTGTAACTaGACAATAGGTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANSFSCN*TIGPTA
Trigger: TGCTGTGGGACCTATTGTTCAGTTACAAGAGAAACT...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNISALF*ASSTVI
Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATCATTCCCAATGTCCTTaGGTTGTTCCTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNHSQCP*VVPSLI
Trigger: GATTAAGGAAGGAACAACTCAAGGACATTGGGAATG...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATATCAGTGCTGTGGGATaGATTGGGCCTTATTGCTTT +
Preference number: 4 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYISAVG*IGPYCF
Trigger: AAAGCAATAAGGCCCAATTCATCCCACAGCACTGAT...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR TCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCATGGGATATTAAAAGATaGTCAGTGCTGTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPWDIKR*SVLWDE
Trigger: TTCATCCCACAGCACTGATCATCTTTTAATATCCCA...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCAAATACCTGGACAGTCTaGTTGGTTAACAGCGTATTG +
Preference number: 4 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSNTWTV*LVNSVL
Trigger: CAATACGCTGTTAACCAATCAGACTGTCCAGGTATT...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGTTCACATGTGACCTGTaGACACCTATTTCGACTATA +
Preference number: 4 (lower is better)
Translates to: NAVTATSYQGIKTGITSWFTCDL*TPISTI
Trigger: TATAGTCGAAATAGGTGTTCACAGGTCACATGTGAA...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp CTTGACAGACAGCTTCGAATTTTCACAGACTACTACATGAACTGTTATGGCAACGCTGTTTTACCTCAGTaGGAAAGCAATGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: LDRQLRIFTDYYMNCYGNAVLPQ*ESNEQK
Trigger: CTTTTGTTCATTGCTTTCTCACTGAGGTAAAACAGC...GTTGCCATAACAGTTCATGTAGTAGTCTGTGAAAATTCGAAGCTGTCTGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR GCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAGCATCAGGCAATTCTaGACTCCTTTTCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNSIRQF*TPFLCT
Trigger: AGTACAGAGAAAAGGAGTGCAGAATTGCCTGATGCT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCTGGCATCTCTGTAGGTaGCATTCAGAATCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSWHLCR*HSESQA
Trigger: AGCTTGCGATTCTGAATGGCACCTACAGAGATGCCA...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACCATCAGGTGTGGTGTTaGAAATTTTATGGACACCCA +
Preference number: 4 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYHQVWC*KFYGHP
Trigger: TGGGTGTCCATAAAATTTGCAACACCACACCTGATG...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAACATCCCTATGAGACGTaGTCATACAGAACACTTACA +
Preference number: 4 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKHPYET*SYRTLT
Trigger: TGTAAGTGTTCTGTATGAGCACGTCTCATAGGGATG...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAATTAAAAGATGATCAGTaGTGTGGGATGAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKLKDDQ*CGMNWA
Trigger: GGCCCAATTCATCCCACAGCACTGATCATCTTTTAA...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCATTAAAAGATGATCAGTaGTGTGGGATGAATTGGGCC +
Preference number: 4 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSLKDDQ*CGMNWA
Trigger: GGCCCAATTCATCCCACAGCACTGATCATCTTTTAA...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANLDAPN*ACLYFA
Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCAACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSNYCSS*VRSSVW
Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTT...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAAACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQNYCSS*VRSSVW
Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTT...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp TATTCACACAGCTGGATCTCATACCACCACAGAACTTCAAGAGACAGTTTACCTATGTTATTTCTGATGTaGACAACAGCTGTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: YSHSWISYHHRTSRDSLPMLFLM*TTAVSS
Trigger: ACTAGACACAGCTGTTGTCCACATCAGAAATAACAT...AGGTAAACTGTCTCTTGAAGTTCTGTGGTGGTATGAGATCCAGCTGTGTGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTCCTGGACAGTCTGATTaGTTAACAGCGTATTGGTAC +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLPGQSD*LTAYWY
Trigger: GTACCAATACGCTGTTAACCAATCAGACTGTCCAGG...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
3UTR CAA 72 bp CTTTACAATGAGAAACAAGTTTTACTGCAGTGCCTCTaGCTATTTCTAAGCAGTAAACTGGTCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: LYNEKQVLLQCL*LFLSSKLVHHL
Trigger: GAGGTGATGGACCAGTTTACTGCTTAGAAATAGCAAGAGGCACTGCAGTAAAACTTGTTTCTCATTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
3UTR CAA 72 bp TTCACAGTCCTCACTTTGTTGATTTTAGCTAAGTACTaGACATGTGCACCCTCATGTTTATACAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FTVLTLLILAKY*TCAPSCLYSGS
Trigger: TGAGCCACTGTATAAACATGAGGGTGCACATGTCAAGTACTTAGCTAAAATCAACAAAGTGAGGACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR CAA 72 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATaGCTTTACTACTATTCAGTGCAGTTTCTAGAACCA +
Preference number: 4 (lower is better)
Translates to: KDDQCCGMNWAL*LYYYSVQFLEP
Trigger: TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
3UTR CAA 72 bp GTTTCAGCTGGTGCCTACTATGTTAAGAATACATGTTaGGGCTTTCTAGACACTTTGATCTTTCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VSAGAYYVKNTC*GFLDTLIFQEE
Trigger: CTCTTCCTGAAAGATCAAAGTGTCTAGAAAGCCCAAACATGTATTCTTAACATAGTAGGCACCAGCTGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACAGTTTCTCTTGTAACTaGACAATAGGTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYSFSCN*TIGPTA
Trigger: TGCTGTGGGACCTATTGTTCAGTTACAAGAGAAACT...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR TCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATAGTTTCTCTTGTAACTaGACAATAGGTCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYSFSCN*TIGPTA
Trigger: TGCTGTGGGACCTATTGTTCAGTTACAAGAGAAACT...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACAGACTACTACATaGACTGTTATGGCAACGGAA +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLSQTTT*TVMATE
Trigger: TTCCGTTGCCATAACAGTTCATGTAGTAGTCTGTGA...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGCTCTCATGTTTAATATaGCTAGGACTCCAAAACACA +
Preference number: 4 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQLSCLI*LGLQNT
Trigger: TGTGTTTTGGAGTCCTAGTCATATTAAACATGAGAG...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR GCA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACTCCTTTTCTCTGTACTaGCATTTAATGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDSFSLY*HLMCHC
Trigger: ACAATGACACATTAAATGGCAGTACAGAGAAAAGGA...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp AGCGTAGATACTATGGTCCAAGGACTGTGTTTTGAGAATCACCGATCAAGACAATCCTTTTCTCTGTACTaGCATTTAATGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: SVDTMVQGLCFENHRSRQSFSLY*HLMCHC
Trigger: ACAATGACACATTAAATGGCAGTACAGAGAAAAGGA...TTGTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGACCATAGTATCTACGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR GCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNKSSFR*SQLGLP
Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCAGTCAACAGCATGCATaGAGCACCAAGGTCATATAC +
Preference number: 4 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSSQQHA*STKVIY
Trigger: GTATATGACCTTGGTGCTGCATGCATGCTGTTGACT...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCAGAAACAAGTTTTACTaGAGTGCCTCTTGCTATTTC +
Preference number: 4 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSRNKFY*SASCYF
Trigger: GAAATAGCAAGAGGCACTGCAGTAAAACTTGTTTCT...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGAGAAACAAGTTTTACTaGAGTGCCTCTTGCTATTTC +
Preference number: 4 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQRNKFY*SASCYF
Trigger: GAAATAGCAAGAGGCACTGCAGTAAAACTTGTTTCT...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTCATCAGGTGTGGTGTTaGAAATTTTATGGACACCCA +
Preference number: 4 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFHQVWC*KFYGHP
Trigger: TGGGTGTCCATAAAATTTGCAACACCACACCTGATG...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCATTCCAGTTGGTTTATTaGATTTCATGTACGGTCATG +
Preference number: 4 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPFQLVY*ISCTVM
Trigger: CATGACCGTACATGAAATGCAATAAACCAACTGGAA...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAACATCCAGCAAGTCAATaGGCTGAAATATCAGGCATG +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQHPASQ*AEISGM
Trigger: CATGCCTGATATTTCAGCCCATTGACTTGCTGGATG...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAAGTACAATTCCACGTaGCAAAATCAGGGAGATCTT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNKYNST*QNQGDL
Trigger: AAGATCTCCCTGATTTTGCCACGTGGAATTGTACTT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCTCTGAGTTCTCCAAGTaGTCAATATCATGTTTTACT +
Preference number: 4 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVSEFSK*SISCFT
Trigger: AGTAAAACATGATATTGACCACTTGGAGAACTCAGA...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACTCATTTCAAACATCTTaGGCCTTAACCTATTGTATC +
Preference number: 4 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDSFQTS*ALTYCI
Trigger: GATACAATAGGTTAAGGCCCAAGATGTTTGAAATGA...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACTTATATTCACACAGCTaGATCTCATACCACCACAGA +
Preference number: 4 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYLYSHS*ISYHHR
Trigger: TCTGTGGTGGTATGAGATCCAGCTGTGTGAATATAA...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
3UTR CAA 72 bp TCCAACTACATGAAAGTTATCTTCACAGTCCTCACTTaGTTGATTTTAGCTAAGTACTTGACATGTGCACCC +
Preference number: 4 (lower is better)
Translates to: SNYMKVIFTVLT*LILAKYLTCAP
Trigger: GGGTGCACATGTCAAGTACTTAGCTAAAATCAACAAAGTGAGGACTGTGAAGATAACTTTCATGTAGTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAAAATTTCTTGGCCTCATaGTACAAAGCGATACTAAAC +
Preference number: 4 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKNFLAS*YKAILN
Trigger: GTTTAGTATCGCTTTGTATCATGAGGCCAAGAAATT...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR TCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATAATTTCTTGGCCTCATaGTACAAAGCGATACTAAAC +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANNFLAS*YKAILN
Trigger: GTTTAGTATCGCTTTGTATCATGAGGCCAAGAAATT...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAATTTACCCAACCAAACTaGACCTCAGTTACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQFTQPN*TSVTKV
Trigger: CACTTTGGTAACTGAGGTTCAGTTTGGTTGGGTAAA...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR GCA 90 bp TCCAAGGATTCTCCCAACAAAATTAAACCCAGAGTTTCTGATTCAATAAGTATGAGCATCAGGCAATTCTaGACTCCTTTTCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: SKDSPNKIKPRVSDSISMSIRQF*TPFLCT
Trigger: AGTACAGAGAAAAGGAGTGCAGAATTGCCTGATGCT...CATACTTATTGAATCAGAAACTCTGGGTTTAATTTTGTTGGGAGAATCCTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR GCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLKSSFR*SQLGLP
Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTT...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYKSSFR*SQLGLP
Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTT...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGAATATCATGTTTTACTaGTTAGGTGGCAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQNIMFY*LGGKAR
Trigger: TCTTGCTTTGCCACCTAAGCAGTAAAACATGATATT...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCACAGGTGTGTCACCATaGAAGACCATACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSTGVSP*KTIQFI
Trigger: AATGAACTGTATGGTCTTGCATGGTGACACACCTGT...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAATTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQLDAPN*ACLYFA
Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCTCATTTCAAACATCTTaGGCCTTAACCTATTGTATC +
Preference number: 4 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSSFQTS*ALTYCI
Trigger: GATACAATAGGTTAAGGCCCAAGATGTTTGAAATGA...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAAATGTTATTTCTGATGTaGACAACAGCTGTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKMLFLM*TTAVSS
Trigger: ACTAGACACAGCTGTTGTCCACATCAGAAATAACAT...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACTGCATAACAACATTTTaGTCAACAACGGACCACTTA +
Preference number: 4 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYCITTF*STTDHL
Trigger: TAAGTGGTCCGTTGTTGACCAAAATGTTGTTATGCA...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392127.6
3UTR CAA 72 bp AGCTTTACTAGTCACATATTCACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAATAACGCCATGTTTAAT +
Preference number: 4 (lower is better)
Translates to: SFTSHIFTEVPF*QQDYLNNAMFN
Trigger: ATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGTGACTAGTAAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
3UTR CAA 72 bp CAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTaGCAAATTTTATGGACACCCAACGCATTTCTTATA +
Preference number: 4 (lower is better)
Translates to: QVSNYIFPSGVV*QILWTPNAFLI
Trigger: TATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATGAGCATCTTCCACAGTaGTTAGTACATGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYEHLPQ*LVHVNL
Trigger: AAGATTTACATGTACTAATCACTGTGGAAGATGCTC...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTGAGCATCTTCCACAGTaGTTAGTACATGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFEHLPQ*LVHVNL
Trigger: AAGATTTACATGTACTAATCACTGTGGAAGATGCTC...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR TCA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACGAGCATCTTCCACAGTaGTTAGTACATGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYEHLPQ*LVHVNL
Trigger: AAGATTTACATGTACTAATCACTGTGGAAGATGCTC...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR GCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATTCCTTTTCTCTGTACTaGCATTTAATGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNSFSLY*HLMCHC
Trigger: ACAATGACACATTAAATGGCAGTACAGAGAAAAGGA...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAATCCTTTTCTCTGTACTaGCATTTAATGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKSFSLY*HLMCHC
Trigger: ACAATGACACATTAAATGGCAGTACAGAGAAAAGGA...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR GCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSKSSFR*SQLGLP
Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTT...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAATATCATGTTTTACTaGTTAGGTGGCAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNNIMFY*LGGKAR
Trigger: TCTTGCTTTGCCACCTAAGCAGTAAAACATGATATT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR GCA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATCCGTTCAATTCATTTTaGAATACCAACCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNPFNSF*NTNPKF
Trigger: AAATTTGGGGTTGGTATTGCAAAATGAATTGAACGG...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATCCGTTCAATTCATTTTaGAATACCAACCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANPFNSF*NTNPKF
Trigger: AAATTTGGGGTTGGTATTGCAAAATGAATTGAACGG...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR GCA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTATCTTTTTACTCGATaGTGTGAGCAGACAGTGATT +
Preference number: 4 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLYLFTR*CEQTVI
Trigger: AATCACTGTCTGCTCACAGCATCGAGTAAAAAGATA...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACTTTTTCCATCAGGTGTaGTGTTGCAAATTTTATGGA +
Preference number: 4 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYFFHQV*CCKFYG
Trigger: TCCATAAAATTTGCAACACCACACCTGATGGAAAAA...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAATCTTTGTCTTTTGTTTaGTTAGATGGTAAGACGAAC +
Preference number: 4 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKSLSFV*LDGKTN
Trigger: GTTCGTCTTACCATCTAACCAAACAAAAGACAAAGA...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CCA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAATGGTTAACAGCGTATTaGTACAGTTTTGTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKWLTAY*YSFVFY
Trigger: ATAGAAGACAAAACTGTACCAATACGCTGTTAACCA...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CCA 90 bp GAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCCTACATGAACTGTTATaGCAACGGAAACTTTTACAA +
Preference number: 4 (lower is better)
Translates to: ELGLIALLLFSAVSRTTFLHELL*QRKLLQ
Trigger: TTGTAAAAGTTTCCGTTGCCATAACAGTTCATGTAG...GAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR TCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAAAATGTATTTGTTCATaGAACAAAGGGCACCTGAGT +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQKCICS*NKGHLS
Trigger: ACTCAGGTGCCCTTTGTTTCATGAACAAATACATTT...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTACATACAGAGCATCATaGCTTTCTTTACTTGAACAA +
Preference number: 4 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFTYRAS*LSLLEQ
Trigger: TTGTTCAAGTAAAGAAAGCCATGATGCTCTGTATGT...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CCA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAATGTTATTTCTGATGTaGACAACAGCTGTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQMLFLM*TTAVSS
Trigger: ACTAGACACAGCTGTTGTCCACATCAGAAATAACAT...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CCA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCTTTTTCCATCAGGTGTaGTGTTGCAAATTTTATGGA +
Preference number: 4 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSFFHQV*CCKFYG
Trigger: TCCATAAAATTTGCAACACCACACCTGATGGAAAAA...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS GCA 90 bp GGGCATCACGTGGCCCGACACGTAGCCGTGGGGCTCCAGAGCGCGTaGGCGCGTCGAGCCCGGTCGCCACGCCCCTTCCGAGGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: GHHVARHVAVGLQSA*ARRARSPRPFRGSL
Trigger: GAGCGACCCTCGGAAGGGGCGTGGCGACCGGGCTCGACGCGCGCACGCGCTCTGGAGCCCCACGGCTACGTGTCGGGCCACGTGATGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS CCA 90 bp TCCTCTTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCACTCACTTaGCGGCGGAGTTCGCCTCAGTTCAGGCGGCGCTGCCAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: SSSSSSFSSSSSSLT*RRSSPQFRRRCQRR
Trigger: CCGCCGCTGGCAGCGCCGCCTGAACTGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAAGAGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS CCA 90 bp CAGGGCAGCTGGTGGGAGAACCGGCGCAGGCCCAGTAATGATCCTTaGAGCAGCCTGGGCTGTTGCTGCAAGAGAAAAGGCAAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: QGSWWENRRRPSNDP*SSLGCCCKRKGKGW
Trigger: CCAGCCCTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGATCATTACTGGGCCTGCGCCGGTTCTCCCACCAGCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275262.11
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000537883.5
ENST00000540719.1
ENST00000544361.1
CDS-3UTR CAA 90 bp GGCGGCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: GGSVCGHNPLVRMDTHIVKIPQK*GRLLMS
Trigger: GCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361758.8
ENST00000545607.5
CDS-3UTR CAA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGCACTGTGGCTGCCCTTaGCTGCACCTATCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SPSWTRKQAQISTGAREPHCGCP*LHLSPP
Trigger: AGGAGGCGATAGGTGCAGCAAAGGGCAGCCACAGTG...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS CCA 90 bp GGTGGGAGAACCGGCGCAGGCCCAGTAATGATCCTTGGAGCAGCCTaGGCTGTTGCTGCAAGAGAAAAGGCAAGGGCTGGTGATTTAATG +
Preference number: 5 (lower is better)
Translates to: GGRTGAGPVMILGAA*AVAAREKARAGDLM
Trigger: CATTAAATCACCAGCCCTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGATCATTACTGGGCCTGCGCCGGTTCTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275262.11
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000537883.5
ENST00000540719.1
ENST00000544361.1
CDS-3UTR CAA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCCTCCTCCTCACTCACTaGGCGGCGGAGTTCGCCTCA +
Preference number: 5 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVLLLTH*AAEFAS
Trigger: TGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGAG...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS CCA 90 bp TCTTTCCGTACTCTGCTAATTTCTTCGTCCAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAGTTGGGCAGGCTGCTCATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SFRTLLISSSSSRSR*LKIPQKLGRLLMSF
Trigger: GAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGAAATTAGCAGAGTACGGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
CDS-3UTR CAA 90 bp GACGGGCCAATGGGGTGGGACCTAAAACTCAGAATGACCTCAGTAATGTCAAATCTCCTCCTCACTCACTaGGCGGCGGAGTTCGCCTCA +
Preference number: 5 (lower is better)
Translates to: DGPMGWDLKLRMTSVMSNLLLTH*AAEFAS
Trigger: TGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGAG...ATTTGACATTACTGAGGTCATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR CAA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: QCRQHHGNQKMARPFALAKIPQK*GRLLMS
Trigger: GCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTT...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: LTSVCGHNPLVRMDTHIVKIPQK*GRLLMS
Trigger: GCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTT...CACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNSRSRW*KIPQKL
Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS CCA 90 bp GCTGCTCATGAGCTTCTTGTCGTTCATCAGCTGCATCAGGTAATCTaGGGTGGGCTTCGGCTTCTCCTTCGTTTCCATTTCCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: AAHELLVVHQLHQVI*GGLRLLLRFHFPDH
Trigger: ATGGTCGGGGAAATGGAAACGAAGGAGAAGCCGAAGCCCACCCCAGATTACCTGATGCAGCTGATGAACGACAAGAAGCTCATGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
CDS-3UTR CAA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVSRSRW*KIPQKL
Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGTCCCTCATTGAGCCTTaGCCTCGGACCATGATTTTA +
Preference number: 5 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKSLIEP*PRTMIL
Trigger: TAAAATCATGGTCCGAGGCAAAGGCTCAATGAGGGA...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp CAGCTTCGGGCCCTGGAGGAACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTGTCCCTCATTGAGCCTTaGCCTCGGACCATGATTTTA +
Preference number: 5 (lower is better)
Translates to: QLRALEELLQQLGEEFRLSLIEP*PRTMIL
Trigger: TAAAATCATGGTCCGAGGCAAAGGCTCAATGAGGGA...CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CAA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVCSQLG*PLFCSS
Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATGGGGTCCACTGTCACTaGAGATTTGCCACGTCTGGT +
Preference number: 5 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDGVHCH*RFATSG
Trigger: ACCAGACGTGGCAAATCTCAAGTGACAGTGGACCCC...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGTTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC +
Preference number: 5 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKFRCSQ*GLPLFC
Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCGAGCAGCCTGGGCTGTaGCTGCAAGAGAAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVEQPGL*LQEKRQ
Trigger: TTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTC...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGGAACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG +
Preference number: 5 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSELLQQ*GEEFRL
Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTC...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000545607.5
CDS-3UTR CAA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCACAGCCAGTGGGCCTTaGACTTTACCCAAGTTAAGC +
Preference number: 5 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVTASGP*TLPKLS
Trigger: GCTTAACTTGGGTAAAGTCAAAGGCCCACTGGCTGT...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LPFAAPIASFYYELIHSPSRSRW*KIPQKL
Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVCSQLG*PLFCSS
Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALCSQLG*PLFCSS
Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT +
Preference number: 5 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKDSGLY*SDQRHY
Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT +
Preference number: 5 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDCGHNP*VRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAATCCTCTGCCAAGTCTaGGCCTCCTACACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEILCQV*ASYTGV
Trigger: CACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGAT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: FASDHDFTSGFCFKLFGCKIPQK*GRLLMS
Trigger: GCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTT...ACAGCCAAACAACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CAA 90 bp ACACCACTAGGTTCAATAGGATACTCAAGGATTGATGTAGCTGGTGCCAATGTGAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TPLGSIGYSRIDVAGANVSRSRW*KIPQKL
Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...CACATTGGCACCAGCTACATCAATCCTTGAGTATCCTATTGAACCTAGTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CAA 90 bp GTTTGGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGGTAGGGCCTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VWHDSGLYLSDQRHYGRACSQLG*PLFCSS
Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...GGCCCTACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CAA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTGAGCAGCCTGGGCTGTaGCTGCAAGAGAAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LPFAAPIASFYYELIHSPEQPGL*LQEKRQ
Trigger: TTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTC...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCGAACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG +
Preference number: 5 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFELLQQ*GEEFRL
Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTC...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp GTGTATAGATTAAACCAGCTTCGGGCCCTGGAGGAACTATTGCAGCAGTTGGGTGAACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG +
Preference number: 5 (lower is better)
Translates to: VYRLNQLRALEELLQQLGELLQQ*GEEFRL
Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTC...ACCCAACTGCTGCAATAGTTCCTCCAGGGCCCGAAGCTGGTTTAATCTATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CAA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT +
Preference number: 5 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFCGHNP*VRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCCCATCAGGTGTGGTGTaGCAAATTTTATGGACACCC +
Preference number: 5 (lower is better)
Translates to: QCRQHHGNQKMARPFALAPSGVV*QILWTP
Trigger: GGGTGTCCATAAAATTTGCAACACCACACCTGATGG...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGAACCCATCAGGTGTGGTGTaGCAAATTTTATGGACACCC +
Preference number: 5 (lower is better)
Translates to: VCGHNPLVRMDTHIVPSNPSGVV*QILWTP
Trigger: GGGTGTCCATAAAATTTGCAACACCACACCTGATGG...GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCGTGCTGTGGGATGAATaGGGCCTTATTGCTTTACTA +
Preference number: 5 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVVLWDE*GLIALL
Trigger: TAGTAAAGCAATAAGGCCCAATTCATCCCACAGCAC...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATCTCCTCCTCACTCACTaGGCGGCGGAGTTCGCCTCA +
Preference number: 5 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNLLLTH*AAEFAS
Trigger: TGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGAG...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCTCTGCTTCAAGTTGTTaGGCTGTAAGTCCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: QCRQHHGNQKMARPFALASASSC*AVSPLG
Trigger: ACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGA...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTAGGGTGGGATTTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC +
Preference number: 5 (lower is better)
Translates to: HLSPLLKRGLLTVRLGWDFRCSQ*GLPLFC
Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...ATCCCACCCTAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp GACGGGCCAATGGGGTGGGACCTAAAACTCAGAATGACCTCAGTAATGTCAAATTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT +
Preference number: 5 (lower is better)
Translates to: DGPMGWDLKLRMTSVMSNCGHNP*VRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...ATTTGACATTACTGAGGTCATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR CAA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAATCCTCTGCCAAGTCTaGGCCTCCTACACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKILCQV*ASYTGV
Trigger: CACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGAT...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp GATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGACGACAGGCAAGAAATACTTGAACAGTTaGCCCAGTAATGTGACACAT +
Preference number: 5 (lower is better)
Translates to: DGKTNGQVPQLAALTTGKKYLNS*PSNVTH
Trigger: ATGTGTCACATTACTGGGCAAACTGTTCAAGTATTT...CTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp TCACCATCCTGGACCAGGAAACAAGCACAGATATCCACAGGAGCCAGAGAGCCGTGGTACCATGACAACTaGTATATTAGCAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: SPSWTRKQAQISTGAREPWYHDN*YISSLT
Trigger: TGTCAAGCTGCTAATATACAAGTTGTCATGGTACCA...CGGCTCTCTGGCTCCTGTGGATATCTGTGCTTGTTTCCTGGTCCAGGATGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTAACCAGGGAATACTaGGCTTCAGGGGACCGTTTA +
Preference number: 5 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAALTREY*ASGDRL
Trigger: TAAACGGTCCCCTGAAGCCAAGTATTCCCTGGTTAG...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTCTCCTCCTCACTCACTaGGCGGCGGAGTTCGCCTCA +
Preference number: 5 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFLLLTH*AAEFAS
Trigger: TGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGAG...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCTCTGCTTCAAGTTGTTaGGCTGTAAGTCCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVSASSC*AVSPLG
Trigger: ACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGA...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCTCCCTCATTGAGCCTTaGCCTCGGACCATGATTTTA +
Preference number: 5 (lower is better)
Translates to: QHHGNQKMARPFALANTFSLIEP*PRTMIL
Trigger: TAAAATCATGGTCCGAGGCAAAGGCTCAATGAGGGA...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATGAACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG +
Preference number: 5 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNELLQQ*GEEFRL
Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTC...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGCCGCACCTAGTTAAATaGCAATTACCAAGACAAAGT +
Preference number: 5 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSPHLVK*QLPRQS
Trigger: ACTTTGTCTTGGTAATTGCAATTTAACTAGGTGCGG...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT +
Preference number: 5 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNCGHNP*VRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT +
Preference number: 5 (lower is better)
Translates to: ASDHDFTSGFCFKLFGCKCGHNP*VRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...CTTACAGCCAAACAACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CAA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGCAACTAAAAGGTCAGTaGGTCTCTAATAGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSQLKGQ*VSNRLQ
Trigger: TTGAAGCCTATTAGAGACCAACTGACCTTTTAGTTG...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCTCTGCTTCACCAAACTaGGTCCACTTAACAGTAGTA +
Preference number: 5 (lower is better)
Translates to: QCRQHHGNQKMARPFALASASPN*VHLTVV
Trigger: TACTACTGTTAAGTGGACCAAGTTTGGTGAAGCAGA...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TCGGTCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCGATTCTTAGCCTTTCGTaGGGAAAGCCATACCTAATA +
Preference number: 5 (lower is better)
Translates to: SVCGHNPLVRMDTHIVPSILSLS*GKPYLI
Trigger: TATTAGGTATGGCTTTCCCAACGAAAGGCTAAGAAT...CGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361758.8
ENST00000453779.6
CDS-3UTR CAA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCATAACCAGACACCGATaGTGTGTACGTATGCACATC +
Preference number: 5 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFITRHR*CVRMHI
Trigger: GATGTGCATACGTACACACAATCGGTGTCTGGTTAT...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCGGCTTTCTAGACACTTaGATCTTTCAGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFGFLDT*IFQEEQ
Trigger: CTGCTCTTCCTGAAAGATCAAAGTGTCTAGAAAGCC...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLACSQLG*PLFCSS
Trigger: TGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537883.5
CDS-3UTR CAA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYKIPQK*GRLLMS
Trigger: GCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTT...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAAAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKSRSRW*KIPQKL
Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAATCTGCTTCAAGTTGTTaGGCTGTAAGTCCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: WEPENGQAFCTSQHFPVESASSC*AVSPLG
Trigger: ACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGA...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAGAGCTGGGGTCTATTTaGTTCACTGAACAATCACTG +
Preference number: 5 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEELGSI*FTEQSL
Trigger: CAGTGATTGTTCAGTGAACAAAATAGACCCCAGCTC...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCGAGCTGGGGTCTATTTaGTTCACTGAACAATCACTG +
Preference number: 5 (lower is better)
Translates to: QHHGNQKMARPFALANTFELGSI*FTEQSL
Trigger: CAGTGATTGTTCAGTGAACAAAATAGACCCCAGCTC...GAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CAGTGTAGGCAACATCATGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCTCATTCCCAATGTCCTaGAGTTGTTCCTTCCTTAAT +
Preference number: 5 (lower is better)
Translates to: QCRQHHGNQKMARPFALASFPMS*SCSFLN
Trigger: ATTAAGGAAGGAACAACTCAAGGACATTGGGAATGA...GGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCATGATGTTGCCTACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCTCTGCACCAGCACCCTaGTATAGTAAAAGTATCTAC +
Preference number: 5 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFSAPAP*YSKSIY
Trigger: GTAGATACTTTTACTATACAAGGGTGCTGGTGCAGA...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp CTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCAGAGGTCTTGGTTAACAGCGTATaGGTACAGTTTTGTCTTCTA +
Preference number: 5 (lower is better)
Translates to: LISRQAWSGHHWVKSSEVLVNSV*VQFCLL
Trigger: TAGAAGACAAAACTGTACCAATACGCTGTTAACCAA...GACCTCTGAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCCAGTTTGATTCCACATaGAAGGCACGAGTGCATATA +
Preference number: 5 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFQFDST*KARVHI
Trigger: TATATGCACTCGTGCCTTCAATGTGGAATCAAACTG...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLKIPQK*GRLLMS
Trigger: GCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTT...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYSRSRW*KIPQKL
Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp ATGGTCCAAGGACTGTGTTTTGAGAATCACCGATCAAGACAAATGCCATGCTCCTCTGCTTCAAGTTGTTaGGCTGTAAGTCCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: MVQGLCFENHRSRQMPCSSASSC*AVSPLG
Trigger: ACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGA...GGAGCATGGCATTTGTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR CAA 90 bp ACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTCCTCTAGGTCCAAGGATTCTGCTTCAAGTTGTTaGGCTGTAAGTCCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: TSGFCFKLFGCKSSRSKDSASSC*AVSPLG
Trigger: ACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGA...ATCCTTGGACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGAAACCGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545346.1
ENST00000545607.5
CDS-3UTR CAA 90 bp TTGAGAATCACCGATCAAGACAAATGCCATGCTCCAACACACCAGTCGGTAATATCCCTCATTGAGCCTTaGCCTCGGACCATGATTTTA +
Preference number: 5 (lower is better)
Translates to: LRITDQDKCHAPTHQSVISLIEP*PRTMIL
Trigger: TAAAATCATGGTCCGAGGCAAAGGCTCAATGAGGGA...TATTACCGACTGGTGTGTTGGAGCATGGCATTTGTCTTGATCGGTGATTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATTTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC +
Preference number: 5 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNFRCSQ*GLPLFC
Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp ACATCCGGTTTCTGCTTCAAGTTGTTTGGCTGTAAGTCCTCTAGGTCCAAGGATTTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC +
Preference number: 5 (lower is better)
Translates to: TSGFCFKLFGCKSSRSKDFRCSQ*GLPLFC
Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...ATCCTTGGACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGAAACCGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CAA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATGAGCAGCCTGGGCTGTaGCTGCAAGAGAAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANEQPGL*LQEKRQ
Trigger: TTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTC...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAAGAGCAGCCTGGGCTGTaGCTGCAAGAGAAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKEQPGL*LQEKRQ
Trigger: TTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTC...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAAGAGCAGCCTGGGCTGTaGCTGCAAGAGAAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKEQPGL*LQEKRQ
Trigger: TTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTC...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAAATTCTTAGCCTTTCGTaGGGAAAGCCATACCTAAAG +
Preference number: 5 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEILSLS*GKPYLK
Trigger: CTTTAGGTATGGCTTTCCCAACGAAAGGCTAAGAAT...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAACCATCAGGTGTGGTGTaGCAAATTTTATGGACACCC +
Preference number: 5 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKPSGVV*QILWTP
Trigger: GGGTGTCCATAAAATTTGCAACACCACACCTGATGG...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp AAACTGTGTGCAGGTAAGCAATTACATTTTTCCATCAGGTGTGGTGTTGCAAATATCCTCTGCCAAGTCTaGGCCTCCTACACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: KLCAGKQLHFSIRCGVANILCQV*ASYTGV
Trigger: CACACCTGTGTAGGAGGCCAAGACTTGGCAGAGGAT...ATTTGCAACACCACACCTGATGGAAAAATGTAATTGCTTACCTGCACACAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCTTCCTTAATCAACCTTaGTCACATTCTGCTTCACCA +
Preference number: 5 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVFLNQP*SHSASP
Trigger: TGGTGAAGCAGAATGTGACAAAGGTTGATTAAGGAA...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAAGGGGTCCACTGTCACTaGAGATTTGCCACGTCTGGT +
Preference number: 5 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKGVHCH*RFATSG
Trigger: ACCAGACGTGGCAAATCTCAAGTGACAGTGGACCCC...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTCAAACAAAGGCTACTTaGTTCCCATCTCTACTGCAC +
Preference number: 5 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLAQTKAT*FPSLLH
Trigger: GTGCAGTAGAGATGGGAACAAAGTAGCCTTTGTTTG...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp TTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTGAATTTCACCAACTTCTaGACTGAAAGCTCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: FVWLDGKTNGQVPQLAALNFTNF*TESSAF
Trigger: GAAAGCTGAGCTTTCAGTCAAGAAGTTGGTGAAATT...CAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCTCCCTCATTGAGCCTTaGCCTCGGACCATGATTTTA +
Preference number: 5 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVSLIEP*PRTMIL
Trigger: TAAAATCATGGTCCGAGGCAAAGGCTCAATGAGGGA...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAATGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKCSQLG*PLFCSS
Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTGAGCAGCCTGGGCTGTaGCTGCAAGAGAAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLEQPGL*LQEKRQ
Trigger: TTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTC...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp CTGCCCTTTGCTGCACCTATCGCCTCCTTCTACTATGAATTAATTCATTCGCCTGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT +
Preference number: 5 (lower is better)
Translates to: LPFAAPIASFYYELIHSPDSGLY*SDQRHY
Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...AGGCGAATGAATTAATTCATAGTAGAAGGAGGCGATAGGTGCAGCAAAGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp CTCATTGAGCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT +
Preference number: 5 (lower is better)
Translates to: LIEPLPRTMILHPVSASSDSGLY*SDQRHY
Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...ACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGCTCAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS-3UTR CAA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAGAACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG +
Preference number: 5 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPELLQQ*GEEFRL
Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTC...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp GACGGGCCAATGGGGTGGGACCTAAAACTCAGAATGACCTCAGTAATGTCAAATTTACTGCAGTGCCTCTaGCTATTTCTAAGCAGTAAA +
Preference number: 5 (lower is better)
Translates to: DGPMGWDLKLRMTSVMSNLLQCL*LFLSSK
Trigger: TTTACTGCTTAGAAATAGCAAGAGGCACTGCAGTAA...ATTTGACATTACTGAGGTCATTCTGAGTTTTAGGTCCCACCCCATTGGCCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392127.6
CDS-3UTR CAA 90 bp TACAGAACACTTACAAGGAATACCATCCTCATAGACGACCACGGAGCTGGGGTCGCTGAGACTAAGCATTaGTTAAATTCAGATCTGATG +
Preference number: 5 (lower is better)
Translates to: YRTLTRNTILIDDHGAGVAETKH*LNSDLM
Trigger: CATCAGATCTGAATTTAACAAATGCTTAGTCTCAGC...GACCCCAGCTCCGTGGTCGTCTATGAGGATGGTATTCCTTGTAAGTGTTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TTGTCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAAT +
Preference number: 5 (lower is better)
Translates to: LSFVWLDGKTNGQVPQLATEVPF*QQDYLN
Trigger: ATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGT...AGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CAA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT +
Preference number: 5 (lower is better)
Translates to: NAVTATSYQGIKTGITSWCGHNP*VRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp CAGTTAACTGATCAGCAGGCAGGCATGGTCAGGTCATCATTGGGTGAAGAGTTCATGAATTGGGCCTTATaGCTTTACTACTATTCAGTG +
Preference number: 5 (lower is better)
Translates to: QLTDQQAGMVRSSLGEEFMNWAL*LYYYSV
Trigger: CACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT...GAACTCTTCACCCAATGATGACCTGACCATGCCTGCCTGCTGATCAGTTAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCAAGACACTCCTTAAAATaGGAACTGTTGTGTAGCATG +
Preference number: 5 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAARHSLK*ELLCSM
Trigger: CATGCTACACAACAGTTCCAATTTTAAGGAGTGTCT...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATCTGCTCATGAGCTTCTaGTCGTTCATCAGCTGCATC +
Preference number: 5 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNLLMSF*SFISCI
Trigger: GATGCAGCTGATGAACGACAAGAAGCTCATGAGCAG...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFCSQLG*PLFCSS
Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TGGGAACCAGAAAATGGCCAGGCCTTTTGCACTAGCCAACACTTTCCAGTTGAACATGGCTTTCTTTACTaGAACAACGAATTTTCGAGT +
Preference number: 5 (lower is better)
Translates to: WEPENGQAFCTSQHFPVEHGFLY*NNEFSS
Trigger: ACTCGAAAATTCGTTGTTCAAGTAAAGAAAGCCATG...TTCAACTGGAAAGTGTTGGCTAGTGCAAAAGGCCTGGCCATTTTCTGGTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAAT +
Preference number: 5 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKTEVPF*QQDYLN
Trigger: ATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGT...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATTTCCTTAATCAACCTTaGTCACATTCTGCTTCACCA +
Preference number: 5 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNFLNQP*SHSASP
Trigger: TGGTGAAGCAGAATGTGACAAAGGTTGATTAAGGAA...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATTCATTCCCAATGTCCTaGAGTTGTTCCTTCCTTAAT +
Preference number: 5 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNSFPMS*SCSFLN
Trigger: ATTAAGGAAGGAACAACTCAAGGACATTGGGAATGA...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCAGACAAAAAGGCTCTTTaGGTCTTTTGTTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAADKKAL*VFCFLT
Trigger: TGTCAAGAAACAAAAGACCAAAAGAGCCTTTTTGTC...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp TCTTTTGTTTGGTTAGATGGTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCAGTTAAGAATACATGTTaGGGCTTTCTAGACACTTTG +
Preference number: 5 (lower is better)
Translates to: SFVWLDGKTNGQVPQLAAVKNTC*GFLDTL
Trigger: CAAAGTGTCTAGAAAGCCCAAACATGTATTCTTAAC...TGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTACCATCTAACCAAACAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp GAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCGGGCTTGCCTCTATTTaGCTCCTCATCTGGGTATTC +
Preference number: 5 (lower is better)
Translates to: ELGLIALLLFSAVSRTTFGLASI*LLIWVF
Trigger: GAATACCCAGATGAGGAGCAAAATAGAGGCAAGCCC...GAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537883.5
CDS-3UTR CAA 90 bp CTCATTGAGCCTTTGCCTCGGACCATGATTTTACATCCGGTTTCTGCTTCAAGTCCATTTAATGTGTCATaGTACATGTCTTTCCGTACT +
Preference number: 5 (lower is better)
Translates to: LIEPLPRTMILHPVSASSPFNVS*YMSFRT
Trigger: AGTACGGAAAGACATGTACAATGACACATTAAATGG...ACTTGAAGCAGAAACCGGATGTAAAATCATGGTCCGAGGCAAAGGCTCAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR CAA 90 bp GAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCTCCCTCATTGAGCCTTaGCCTCGGACCATGATTTTA +
Preference number: 5 (lower is better)
Translates to: ELGLIALLLFSAVSRTTFSLIEP*PRTMIL
Trigger: TAAAATCATGGTCCGAGGCAAAGGCTCAATGAGGGA...GAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGTTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC +
Preference number: 5 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQFRCSQ*GLPLFC
Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACGAACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG +
Preference number: 5 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYELLQQ*GEEFRL
Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTC...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAATTTTAGCTAAGTACTaGACATGTGCACCCTCATGT +
Preference number: 5 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKILAKY*TCAPSC
Trigger: ACATGAGGGTGCACATGTCAAGTACTTAGCTAAAAT...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATTTCACAGTCCTCACTTaGTTGATTTTAGCTAAGTAC +
Preference number: 5 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNFTVLT*LILAKY
Trigger: GTACTTAGCTAAAATCAACAAAGTGAGGACTGTGAA...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAGCTGGGGTCTATTTaGTTCACTGAACAATCACTG +
Preference number: 5 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQELGSI*FTEQSL
Trigger: CAGTGATTGTTCAGTGAACAAAATAGACCCCAGCTC...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TACCATCCTCATAGACGACCACGGAGCTGGGGTCTATTTTGTTCACTGAACAATAATGAGCATTTCGGTTaGCTGACACTGCATTTTAAA +
Preference number: 5 (lower is better)
Translates to: YHPHRRPRSWGLFCSLNNNEHFG*LTLHFK
Trigger: TTTAAAATGCAGTGTCAGCAAACCGAAATGCTCATT...ATTGTTCAGTGAACAAAATAGACCCCAGCTCCGTGGTCGTCTATGAGGATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCTCTGCTTCACCAAACTaGGTCCACTTAACAGTAGTA +
Preference number: 5 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVSASPN*VHLTVV
Trigger: TACTACTGTTAAGTGGACCAAGTTTGGTGAAGCAGA...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp GTAGATACTATGGTCCAAGGACTGTGTTTTGAGAATCACCGATCAAGACAAATGTCCAAGGACTGTGTTTaGAGAATCACCGATCAAGAC +
Preference number: 5 (lower is better)
Translates to: VDTMVQGLCFENHRSRQMSKDCV*RITDQD
Trigger: GTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGA...CATTTGTCTTGATCGGTGATTCTCAAAACACAGTCCTTGGACCATAGTATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS-3UTR CAA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCATCTGCTTCAAGTTGTTaGGCTGTAAGTCCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSSASSC*AVSPLG
Trigger: ACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGA...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCATTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC +
Preference number: 5 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSFRCSQ*GLPLFC
Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT +
Preference number: 5 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSDSGLY*SDQRHY
Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGAACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG +
Preference number: 5 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQELLQQ*GEEFRL
Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTTC...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAACATGGCTTTCTTTACTaGAACAACGAATTTTCGAGT +
Preference number: 5 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKHGFLY*NNEFSS
Trigger: ACTCGAAAATTCGTTGTTCAAGTAAAGAAAGCCATG...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TATTCACACAGCTGGATCTCATACCACCACAGAACTTCAAGAGACAGTTTACCTTTACTGCAGTGCCTCTaGCTATTTCTAAGCAGTAAA +
Preference number: 5 (lower is better)
Translates to: YSHSWISYHHRTSRDSLPLLQCL*LFLSSK
Trigger: TTTACTGCTTAGAAATAGCAAGAGGCACTGCAGTAA...AGGTAAACTGTCTCTTGAAGTTCTGTGGTGGTATGAGATCCAGCTGTGTGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT +
Preference number: 5 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSCGHNP*VRMDTH
Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATTTTAGCTAAGTACTaGACATGTGCACCCTCATGT +
Preference number: 5 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVILAKY*TCAPSC
Trigger: ACATGAGGGTGCACATGTCAAGTACTTAGCTAAAAT...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp CTGGGAAAAGGAGCATGCACGGGACCACAGGACAGAGTATTAATAGAAAAGAAAACAGTCCTCACTTTGTaGATTTTAGCTAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: LGKGACTGPQDRVLIEKKTVLTL*ILAKYL
Trigger: CAAGTACTTAGCTAAAATCAACAAAGTGAGGACTGT...TTTCTTTTCTATTAATACTCTGTCCTGTGGTCCCGTGCATGCTCCTTTTCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCCAACTAAAAGGTCAGTaGGTCTCTAATAGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVQLKGQ*VSNRLQ
Trigger: TTGAAGCCTATTAGAGACCAACTGACCTTTTAGTTG...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCTCATTCCCAATGTCCTaGAGTTGTTCCTTCCTTAAT +
Preference number: 5 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVSFPMS*SCSFLN
Trigger: ATTAAGGAAGGAACAACTCAAGGACATTGGGAATGA...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAAGTGCTGTGGGATGAATaGGGCCTTATTGCTTTACTA +
Preference number: 5 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKVLWDE*GLIALL
Trigger: TAGTAAAGCAATAAGGCCCAATTCATCCCACAGCAC...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361752.8
ENST00000361758.8
ENST00000537883.5
CDS-3UTR CAA 90 bp CCATCAGGTGTGGTGTTGCAAATTTTATGGACACCCAACGCATTTCTTATAGACCCATTTAATGTGTCATaGTACATGTCTTTCCGTACT +
Preference number: 5 (lower is better)
Translates to: PSGVVLQILWTPNAFLIDPFNVS*YMSFRT
Trigger: AGTACGGAAAGACATGTACAATGACACATTAAATGG...GTCTATAAGAAATGCGTTGGGTGTCCATAAAATTTGCAACACCACACCTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp ATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCTGCTTCAAGTTGTTaGGCTGTAAGTCCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: MNWALLLYYYSVQFLEPLSASSC*AVSPLG
Trigger: ACCTAGAGGACTTACAGCCAAACAACTTGAAGCAGA...AAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAATCCCTCATTGAGCCTTaGCCTCGGACCATGATTTTA +
Preference number: 5 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQSLIEP*PRTMIL
Trigger: TAAAATCATGGTCCGAGGCAAAGGCTCAATGAGGGA...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT +
Preference number: 5 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNDSGLY*SDQRHY
Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp ACCTTAAAAGATCAAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCGCTGAGACTAAGCATTaGTTAAATTCAGATCTGATG +
Preference number: 5 (lower is better)
Translates to: TLKDQSPKSQQHACSTKVAETKH*LNSDLM
Trigger: CATCAGATCTGAATTTAACAAATGCTTAGTCTCAGC...GACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTTGATCTTTTAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAAT +
Preference number: 5 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNTEVPF*QQDYLN
Trigger: ATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCCCGCACCTAGTTAAATaGCAATTACCAAGACAAAGT +
Preference number: 5 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSPHLVK*QLPRQS
Trigger: ACTTTGTCTTGGTAATTGCAATTTAACTAGGTGCGG...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGCAACTAAAAGGTCAGTaGGTCTCTAATAGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQQLKGQ*VSNRLQ
Trigger: TTGAAGCCTATTAGAGACCAACTGACCTTTTAGTTG...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATGTGCTGTGGGATGAATaGGGCCTTATTGCTTTACTA +
Preference number: 5 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYVLWDE*GLIALL
Trigger: TAGTAAAGCAATAAGGCCCAATTCATCCCACAGCAC...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CAA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCATCTGCACCAGCACCCTaGTATAGTAAAAGTATCTAC +
Preference number: 5 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSSAPAP*YSKSIY
Trigger: GTAGATACTTTTACTATACAAGGGTGCTGGTGCAGA...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCTTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC +
Preference number: 5 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSFRCSQ*GLPLFC
Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAAGTCATCAATGAAGACTaGATGCTAATACCAATCTCC +
Preference number: 5 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKVINED*MLIPIS
Trigger: GGAGATTGGTATTAGCATCAAGTCTTCATTGATGAC...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAAT +
Preference number: 5 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYTEVPF*QQDYLN
Trigger: ATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGT...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp CTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGGAAAAACCGCACCTAGTTAAATaGCAATTACCAAGACAAAGT +
Preference number: 5 (lower is better)
Translates to: LKVNSMHAAPRSYTIQEKPHLVK*QLPRQS
Trigger: ACTTTGTCTTGGTAATTGCAATTTAACTAGGTGCGG...TTTTTCCTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp TTTCTGAGTTCTCCAAGTGGTCAATATCATGTTTTACTGCTTAGGTGGCAAAGCTTCACAGTCCTCACTTaGTTGATTTTAGCTAAGTAC +
Preference number: 5 (lower is better)
Translates to: FLSSPSGQYHVLLLRWQSFTVLT*LILAKY
Trigger: GTACTTAGCTAAAATCAACAAAGTGAGGACTGTGAA...GCTTTGCCACCTAAGCAGTAAAACATGATATTGACCACTTGGAGAACTCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp AAAGTCCTAAAAGTCAACAGCATGCATGCAGCACCAAGGTCATATACAATTCAGAATGAGCATTTCGGTTaGCTGACACTGCATTTTAAA +
Preference number: 5 (lower is better)
Translates to: KVLKVNSMHAAPRSYTIQNEHFG*LTLHFK
Trigger: TTTAAAATGCAGTGTCAGCAAACCGAAATGCTCATT...CTGAATTGTATATGACCTTGGTGCTGCATGCATGCTGTTGACTTTTAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp AATGCTGTAACAGCTACTTCTTATCAAGGAATAAAGACAGGCATCACATCCTGGATGAATTGGGCCTTATaGCTTTACTACTATTCAGTG +
Preference number: 5 (lower is better)
Translates to: NAVTATSYQGIKTGITSWMNWAL*LYYYSV
Trigger: CACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT...CCAGGATGTGATGCCTGTCTTTATTCCTTGATAAGAAGTAGCTGTTACAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCAGACAAAAAGGCTCTTTaGGTCTTTTGTTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPDKKAL*VFCFLT
Trigger: TGTCAAGAAACAAAAGACCAAAAGAGCCTTTTTGTC...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp GGGATGAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCATATCACCTCAAGTGTTaGAGTGTCGCAAATTTATTC +
Preference number: 5 (lower is better)
Translates to: GMNWALLLYYYSVQFLEPYHLKC*SVANLF
Trigger: GAATAAATTTGCGACACTCAAACACTTGAGGTGATA...TGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp AAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACTATTCATTTATGTCACCCCTTTaGAGAAGCTGGTTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: KDDQCCGMNWALLLYYYSFMSPL*RSWFES
Trigger: ACTTTCAAACCAGCTTCTCAAAAGGGGTGACATAAA...TGAATAGTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361752.8
CDS-3UTR CAA 90 bp GAATTGGGCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCCCATTTAATGTGTCATaGTACATGTCTTTCCGTACT +
Preference number: 5 (lower is better)
Translates to: ELGLIALLLFSAVSRTTFPFNVS*YMSFRT
Trigger: AGTACGGAAAGACATGTACAATGACACATTAAATGG...GAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGCCCAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT +
Preference number: 5 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSDSGLY*SDQRHY
Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GGTCAACCATGTAGTACTCTAAACGTTCATATAGAATTACATGGTTATATGTCCATTCTTAGCCTTTCGTaGGGAAAGCCATACCTAAAG +
Preference number: 5 (lower is better)
Translates to: GQPCSTLNVHIELHGYMSILSLS*GKPYLK
Trigger: CTTTAGGTATGGCTTTCCCAACGAAAGGCTAAGAAT...GGACATATAACCATGTAATTCTATATGAACGTTTAGAGTACTACATGGTTGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275262.11
ENST00000392127.6
CDS-3UTR CAA 90 bp GCCTTATTGCTTTACTACTATTCAGTGCAGTTTCTAGAACCACTTTCACCCAAAGCTGAGACTAAGCATTaGTTAAATTCAGATCTGATG +
Preference number: 5 (lower is better)
Translates to: ALLLYYYSVQFLEPLSPKAETKH*LNSDLM
Trigger: CATCAGATCTGAATTTAACAAATGCTTAGTCTCAGC...TTTGGGTGAAAGTGGTTCTAGAAACTGCACTGAATAGTAGTAAAGCAATAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CAA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTCCGCACCTAGTTAAATaGCAATTACCAAGACAAAGT +
Preference number: 5 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFPHLVK*QLPRQS
Trigger: ACTTTGTCTTGGTAATTGCAATTTAACTAGGTGCGG...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp AAGCACCATCCGTTCAATTCATTTTGCAATACCAACCCCAAATTTCAGAACTTTATTTTAGCTAAGTACTaGACATGTGCACCCTCATGT +
Preference number: 5 (lower is better)
Translates to: KHHPFNSFCNTNPKFQNFILAKY*TCAPSC
Trigger: ACATGAGGGTGCACATGTCAAGTACTTAGCTAAAAT...AAAGTTCTGAAATTTGGGGTTGGTATTGCAAAATGAATTGAACGGATGGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp AATAATTTAAGTGAAGGACTTCAGACATCTCCCTTAGACCCAATGAGTGCATACACAGTCCTCACTTTGTaGATTTTAGCTAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: NNLSEGLQTSPLDPMSAYTVLTL*ILAKYL
Trigger: CAAGTACTTAGCTAAAATCAACAAAGTGAGGACTGT...GTATGCACTCATTGGGTCTAAGGGAGATGTCTGAAGTCCTTCACTTAAATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp GTGCCTTTCTTGCAGCAGGACTACTTAAATAACGCCATGTTTAATACAGACAATAATGAGCATTTCGGTTaGCTGACACTGCATTTTAAA +
Preference number: 5 (lower is better)
Translates to: VPFLQQDYLNNAMFNTDNNEHFG*LTLHFK
Trigger: TTTAAAATGCAGTGTCAGCAAACCGAAATGCTCATT...ATTGTCTGTATTAAACATGGCGTTATTTAAGTAGTCCTGCTGCAAGAAAGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATATTCTTAGCCTTTCGTaGGGAAAGCCATACCTAATA +
Preference number: 5 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYILSLS*GKPYLI
Trigger: TATTAGGTATGGCTTTCCCAACGAAAGGCTAAGAAT...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361758.8
ENST00000453779.6
CDS-3UTR CAA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATCCATTTAATGTGTCATaGTACATGTCTTTCCGTACT +
Preference number: 5 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYPFNVS*YMSFRT
Trigger: AGTACGGAAAGACATGTACAATGACACATTAAATGG...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275262.11
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp ATATTAAAAGATGATCAGTGCTGTGGGATGAATTGGGCCTTATTGCTTTACTACCCATTTAATGTGTCATaGTACATGTCTTTCCGTACT +
Preference number: 5 (lower is better)
Translates to: ILKDDQCCGMNWALLLYYPFNVS*YMSFRT
Trigger: AGTACGGAAAGACATGTACAATGACACATTAAATGG...GTAGTAAAGCAATAAGGCCCAATTCATCCCACAGCACTGATCATCTTTTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361752.8
ENST00000361758.8
CDS-3UTR CAA 90 bp TCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAGTTACAGTATACAGTCCTCACTTTGTaGATTTTAGCTAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: SWALTYCIHSFTIPKLQYTVLTL*ILAKYL
Trigger: CAAGTACTTAGCTAAAATCAACAAAGTGAGGACTGT...ATACTGTAACTTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAATTCCTTAATCAACCTTaGTCACATTCTGCTTCACCA +
Preference number: 5 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQFLNQP*SHSASP
Trigger: TGGTGAAGCAGAATGTGACAAAGGTTGATTAAGGAA...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275262.11
ENST00000392127.6
ENST00000453779.6
CDS-3UTR CAA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAATGAATTGGGCCTTATaGCTTTACTACTATTCAGTG +
Preference number: 5 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQMNWAL*LYYYSV
Trigger: CACTGAATAGTAGTAAAGCAATAAGGCCCAATTCAT...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CAA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAAAAATACTTGAACAGTTaGCCCAGTAATGTGACACAT +
Preference number: 5 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQKYLNS*PSNVTH
Trigger: ATGTGTCACATTACTGGGCAAACTGTTCAAGTATTT...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS-3UTR CAA 90 bp ATTTCAAACATCTTGGGCCTTAACCTATTGTATCCATTCATTTACAATCCCCAATATCACCTCAAGTGTTaGAGTGTCGCAAATTTATTC +
Preference number: 5 (lower is better)
Translates to: ISNILGLNLLYPFIYNPQYHLKC*SVANLF
Trigger: GAATAAATTTGCGACACTCAAACACTTGAGGTGATA...TTGGGGATTGTAAATGAATGGATACAATAGGTTAAGGCCCAAGATGTTTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS CCA 72 bp AACGGGAGTGTGACGGACTGCGGCGCTCGGCGGGCCTaGGCGCAAGGACTGGGTCGCCGCCGTGCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: NGSVTDCGARRA*AQGLGRRRAGR
Trigger: GCGCCCCGCACGGCGGCGACCCAGTCCTTGCGCCCAGGCCCGCCGAGCGCCGCAGTCCGTCACACTCCCGTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS GCA 72 bp GTGGCCCGACACGTAGCCGTGGGGCTCCAGAGCGCGTaGGCGCGTCGAGCCCGGTCGCCACGCCCCTTCCGA +
Preference number: 6 (lower is better)
Translates to: VARHVAVGLQSA*ARRARSPRPFR
Trigger: TCGGAAGGGGCGTGGCGACCGGGCTCGACGCGCGCACGCGCTCTGGAGCCCCACGGCTACGTGTCGGGCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS CAA 90 bp CTCCTCTTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCACTCACTaGGCGGCGGAGTTCGCCTCAGTTCAGGCGGCGCTGCCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: LLFLLLLLLLLLLTH*AAEFASVQAALPAA
Trigger: CGCCGCTGGCAGCGCCGCCTGAACTGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAAGAGGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS CCA 72 bp TCCTCCTCCTTCTCCTCCTCCTCCTCCTCACTCACTTaGCGGCGGAGTTCGCCTCAGTTCAGGCGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: SSSFSSSSSSLT*RRSSPQFRRRC
Trigger: GCAGCGCCGCCTGAACTGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGAGGAGGAGGAGAAGGAGGAGGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS CAA 72 bp CTCCTCCTCCTTCTCCTCCTCCTCCTCCTCACTCACTaGGCGGCGGAGTTCGCCTCAGTTCAGGCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLTH*AAEFASVQAAL
Trigger: CAGCGCCGCCTGAACTGAGGCGAACTCCGCCGCCAAGTGAGTGAGGAGGAGGAGGAGGAGAAGGAGGAGGAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361758.8
CDS CCA 72 bp ACCGGCGCAGGCCCAGTAATGATCCTTGGAGCAGCCTaGGCTGTTGCTGCAAGAGAAAAGGCAAGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: TGAGPVMILGAA*AVAAREKARAG
Trigger: ACCAGCCCTTGCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGATCATTACTGGGCCTGCGCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275262.11
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000537883.5
ENST00000540719.1
ENST00000544361.1
CDS CCA 72 bp TGGTGGGAGAACCGGCGCAGGCCCAGTAATGATCCTTaGAGCAGCCTGGGCTGTTGCTGCAAGAGAAAAGGC +
Preference number: 6 (lower is better)
Translates to: WWENRRRPSNDP*SSLGCCCKRKG
Trigger: GCCTTTTCTCTTGCAGCAACAGCCCAGGCTGCTCCAAGGATCATTACTGGGCCTGCGCCGGTTCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275262.11
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000453779.6
ENST00000537883.5
ENST00000540719.1
ENST00000544361.1
CDS CAA 90 bp TCTTCGTCCAGCAGCCGCTCGAGGTGGTTGAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGCTTCTTGTCGTTCATCAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: SSSSSRSRWLKIPQK*GRLLMSFLSFISCI
Trigger: GATGCAGCTGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
CDS CAA 90 bp ACTTCGTCCAGCAGCCGCTCGAGGTGGTTGAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGCTTCTTGTCGTTCATCAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: TSSSSRSRWLKIPQK*GRLLMSFLSFISCI
Trigger: GATGCAGCTGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545607.5
CDS CCA 72 bp ACTCTGCTAATTTCTTCGTCCAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAGTTGGGCAGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: TLLISSSSSRSR*LKIPQKLGRLL
Trigger: GAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGAAATTAGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
CDS CAA 72 bp AGCAGCCGCTCGAGGTGGTTGAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGCTTCTTGTCGTTCATC +
Preference number: 6 (lower is better)
Translates to: SSRSRWLKIPQK*GRLLMSFLSFI
Trigger: GATGAACGACAAGAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
ENST00000545607.5
CDS CAA 72 bp CTGCTAATTTCTTCGTCCAGCAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTGGGCAGGCTGCTCATG +
Preference number: 6 (lower is better)
Translates to: LLISSSSSRSRW*KIPQKLGRLLM
Trigger: CATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGAAATTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
CDS CAA 90 bp TTCCGTACTCTGCTAATTTCTTCGTCCAGCAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTGGGCAGGCTGCTCATGAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: FRTLLISSSSSRSRW*KIPQKLGRLLMSFL
Trigger: CAAGAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGAAATTAGCAGAGTACGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
CDS CCA 72 bp TCTTGTCGTTCATCAGCTGCATCAGGTAATCTGGGGTaGGCTTCGGCTTCTCCTTCGTTTCCATTTCCCCGA +
Preference number: 6 (lower is better)
Translates to: SCRSSAASGNLG*ASASPSFPFPR
Trigger: TCGGGGAAATGGAAACGAAGGAGAAGCCGAAGCCCACCCCAGATTACCTGATGCAGCTGATGAACGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
CDS CAA 72 bp TGTTGCCATTGTGACTCGGTCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCATATCGTGCCTTCGAAC +
Preference number: 6 (lower is better)
Translates to: CCHCDSVCGHNP*VRMDTHIVPSN
Trigger: GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGTCACAATGGCAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544361.1
CDS TCA 72 bp TGCTCTAGCTCTGCTGCCCACTTGTCTTTGCACCTATaGAATGAACATATACTCCCAACTCTCAGGTCCCCT +
Preference number: 6 (lower is better)
Translates to: CSSSAAHLSLHL*NEHILPTLRSP
Trigger: AGGGGACCTGAGAGTTGGGAGTATATGTTCATTTCATAGGTGCAAAGACAAGTGGGCAGCAGAGCTAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537124.5
CDS CCA 72 bp TGCTCCAACACACCAGTCGGTAATAGTAGTTCACCGTaGCAAGAAGTCACAAATCTGGGTATTCTTTTACAG +
Preference number: 6 (lower is better)
Translates to: CSNTPVGNSSSP*QEVTNLGILLQ
Trigger: CTGTAAAAGAATACCCAGATTTGTGACTTCTTGCCACGGTGAACTACTATTACCGACTGGTGTGTTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS GCA 72 bp TCCACAGTGATTAGTACATGTAAATCTTCATTTAGATaGTCCCAATTGGGCTTGCCTCTATTTTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: STVISTCKSSFR*SQLGLPLFCSS
Trigger: TGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTTACATGTACTAATCACTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537883.5
CDS CAA 72 bp GCACTCCTTTTCTCTGTACTGCCATTTAATGTGTCATaGTACATGTCTTTCCGTACTCTGCTAATTTCTTCG +
Preference number: 6 (lower is better)
Translates to: ALLFSVLPFNVS*YMSFRTLLISS
Trigger: CGAAGAAATTAGCAGAGTACGGAAAGACATGTACAATGACACATTAAATGGCAGTACAGAGAAAAGGAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275262.11
ENST00000361195.6
ENST00000361752.8
ENST00000361758.8
ENST00000392127.6
ENST00000424802.7
ENST00000453779.6
CDS CAA 72 bp GCACTCCTTTTCTCTGTACTGCCATTTAATGTGTCATaGTACATGTCTTTCCGTACTCTGCTAATTTCAGGT +
Preference number: 6 (lower is better)
Translates to: ALLFSVLPFNVS*YMSFRTLLISG
Trigger: ACCTGAAATTAGCAGAGTACGGAAAGACATGTACAATGACACATTAAATGGCAGTACAGAGAAAAGGAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537041.5
CDS CAA 72 bp GCACTCCTTTTCTCTGTACTGCCATTTAATGTGTCATaGTACATGTCTTTCCGTACTCTGCTAATTTCATGC +
Preference number: 6 (lower is better)
Translates to: ALLFSVLPFNVS*YMSFRTLLISC
Trigger: GCATGAAATTAGCAGAGTACGGAAAGACATGTACAATGACACATTAAATGGCAGTACAGAGAAAAGGAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545346.1
CDS CAA 72 bp GCACTCCTTTTCTCTGTACTGCCATTTAATGTGTCATaGTACATGTCTTTCCGTACTCTGCTAATTTCTTCA +
Preference number: 6 (lower is better)
Translates to: ALLFSVLPFNVS*YMSFRTLLISS
Trigger: TGAAGAAATTAGCAGAGTACGGAAAGACATGTACAATGACACATTAAATGGCAGTACAGAGAAAAGGAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537124.5
CDS CAA 72 bp ATTAGTACATGTAAATCTTCATTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGCTCCTCATCTGGGTAT +
Preference number: 6 (lower is better)
Translates to: ISTCKSSFRCSQ*GLPLFCSSSGY
Trigger: ATACCCAGATGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAATGAAGATTTACATGTACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537883.5
CDS CAA 72 bp GCACTCCTTTTCTCTGTACTGCCATTTAATGTGTCATaGTACATGTCTTTCCGTACTCTGCTAATTTCTGTA +
Preference number: 6 (lower is better)
Translates to: ALLFSVLPFNVS*YMSFRTLLISV
Trigger: TACAGAAATTAGCAGAGTACGGAAAGACATGTACAATGACACATTAAATGGCAGTACAGAGAAAAGGAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544436.5
CDS CAA 72 bp GCACTCCTTTTCTCTGTACTGCCATTTAATGTGTCATaGTACATGTCTTTCCGTACTCTGCTAATTTCTGTT +
Preference number: 6 (lower is better)
Translates to: ALLFSVLPFNVS*YMSFRTLLISV
Trigger: AACAGAAATTAGCAGAGTACGGAAAGACATGTACAATGACACATTAAATGGCAGTACAGAGAAAAGGAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544823.5
CDS GCA 72 bp CCCTGCAGCTCTAAAACACAATTCTCTGATATAATCTaGAAAGTAAGTTTGAGACCCTGTAAAACTATGACA +
Preference number: 6 (lower is better)
Translates to: PCSSKTQFSDII*KVSLRPCKTMT
Trigger: TGTCATAGTTTTACAGGGTCTCAAACTTACTTTGCAGATTATATCAGAGAATTGTGTTTTAGAGCTGCAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537124.5