RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PYROXD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000119943

Ensembl transcript IDs: ENST00000370575.5, ENST00000462874.1, ENST00000464808.1, ENST00000483923.5, ENST00000494941.1

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGGGAAGCTaGTCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCT +
Preference number: 1 (lower is better)
Translates to: VVALCTNPKLNFLGS*SNGALGIQGWSLLP
Trigger: AGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
3UTR-3UTR CCA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCGTGGAGTCTTCTTCCTaGGTCAGAGCTGGTTCAGGG +
Preference number: 2 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCVESSS*VRAGSG
Trigger: CCCTGAACCAGCTCTGACCCAGGAAGAAGACTCCAC...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
3UTR-3UTR TCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTGTACTAACCCGAAGCTaGACTTCCTGGGAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTVLTRS*TSWEAD
Trigger: ATCAGCTTCCCAGGAAGTTCAGCTTCGGGTTAGTAC...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
3UTR-3UTR TCA 90 bp ATATTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGAACTTCCTGGGAAGCTaGTCCAATGGAGCACTTGGA +
Preference number: 2 (lower is better)
Translates to: ILVLIKQNQSMYGGMGIRNFLGS*SNGALG
Trigger: TCCAAGTGCTCCATTGGATCAGCTTCCCAGGAAGTT...CCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
3UTR CCA 72 bp GCTGAACTTCCTGGGAAGCTGATCCAATGGAGCACTTaGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGA +
Preference number: 3 (lower is better)
Translates to: AELPGKLIQWST*NSGVESSSWVR
Trigger: TCTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGGAAGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
3UTR TCA 72 bp TTATGTACTAACCCGAAGCTGAACTTCCTGGGAAGCTaGTCCAATGGAGCACTTGGAATTCAGGGGTGGAGT +
Preference number: 3 (lower is better)
Translates to: LCTNPKLNFLGS*SNGALGIQGWS
Trigger: ACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGGAAGTTCAGCTTCGGGTTAGTACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
3UTR-3UTR CAA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCGATCCAATGGAGCACTaGGAATTCAGGGGTGGAGTC +
Preference number: 3 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFDPMEH*EFRGGV
Trigger: GACTCCACCCCTGAATTCCAAGTGCTCCATTGGATC...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp CCTGGGAAGCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCGCAGCGGCTGGCCCCTaGGAGCATTGGGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PGKLIQWSTWNSGVESSSAAAGP*EHWGPP
Trigger: TGGCGGCCCCCAATGCTCCCAGGGGCCAGCCGCTGC...GGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp CCTGGGAAGCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGATGGAGCATTGGTaGTGGGGCAGCGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGKLIQWSTWNSGVESSSWMEHW*WGSGWP
Trigger: GGGCCAGCCGCTGCCCCATCACCAATGCTCCATCCA...GGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp CCTGGGAAGCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCAGGCGGCCACAGCCTTaGAGAGACCTCGGCCACTTG +
Preference number: 4 (lower is better)
Translates to: PGKLIQWSTWNSGVESSSRRPQP*RDLGHL
Trigger: CAAGTGGCCGAGGTCTCTGCAAGGCTGTGGCCGCCT...GGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGGAGACCTCGGCCACTTaGAGCCATTTCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ADPMEHLEFRGGVFFLGQETSAT*SHFCPR
Trigger: CCTGGGGCAGAAATGGCTGCAAGTGGCCGAGGTCTC...CTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp CCTGGGAAGCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCCCACTCCCCGGAGTGTaGGGACTTGTCATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGKLIQWSTWNSGVESSSPLPGV*GLVMAP
Trigger: TGGAGCCATGACAAGTCCCCACACTCCGGGGAGTGG...GGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp CCTGGGAAGCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCACACCTCCTCCAGGATaGGCCCCACTTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: PGKLIQWSTWNSGVESSSTPPPG*APLPQR
Trigger: TCTCTGTGGAAGTGGGGCTCATCCTGGAGGAGGTGT...GGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp CCTGGGAAGCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTCTCTGCAGGTACGCTaGAGCCACCAGTCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: PGKLIQWSTWNSGVESSSSLQVR*SHQSVV
Trigger: CACAACGGACTGGTGGCTGCAGCGTACCTGCAGAGA...GGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGCCAGCGAGGAAGGGATaGAGAGCTCAATCACAGGCC +
Preference number: 4 (lower is better)
Translates to: ADPMEHLEFRGGVFFLGQPARKG*RAQSQA
Trigger: GGCCTGTGATTGAGCTCTGCATCCCTTCCTCGCTGG...CTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAAGGCCCCTGGGAGCATTaGGGGCCGCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKGPWEH*GPPGSW
Trigger: CCAGCTTCCTGGCGGCCCCCAATGCTCCCAGGGGCC...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAACAGAGAGGGCACCCATaGCCCCCTGGACGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKQRGHP*PPGRSP
Trigger: GGGGCTACGTCCAGGGGGGCATGGGTGCCCTCTCTG...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp GCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGTGCTTGCTCCATGTGTaGTGGCTGAGCTTGCGATCG +
Preference number: 4 (lower is better)
Translates to: ADPMEHLEFRGGVFFLGQCLLHV*WLSLRS
Trigger: CGATCGCAAGCTCAGCCACCACACATGGAGCAAGCA...CTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp GCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGGAAGGTGATCTGCGGTaGTGTGTTGGACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: ADPMEHLEFRGGVFFLGQEGDLR*CVGQHH
Trigger: ATGGTGCTGTCCAACACATCACCGCAGATCACCTTC...CTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGCTGCTTCTGGTTTTCTaGCATGTCTGTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ADPMEHLEFRGGVFFLGQLLLVF*HVCAQQ
Trigger: CTGCTGGGCACAGACATGGCAGAAAACCAGAAGCAG...CTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp CCTGGGAAGCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTTCCTGGGTCAGAGCTaGTTCAGGGTCACATGCTCT +
Preference number: 4 (lower is better)
Translates to: PGKLIQWSTWNSGVESSSFLGQS*FRVTCS
Trigger: AGAGCATGTGACCCTGAACCAGCTCTGACCCAGGAA...GGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp ATATTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGGCGGCCTCAGCAGGCTaGGCAGGTAGGACGCGCGGG +
Preference number: 4 (lower is better)
Translates to: ILVLIKQNQSMYGGMGIRAASAG*AGRTRG
Trigger: CCCGCGCGTCCTACCTGCTCAGCCTGCTGAGGCCGC...CCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp GCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGAACTTCCTGGGAAGCTaGTCCAATGGAGCACTTGGA +
Preference number: 4 (lower is better)
Translates to: ADPMEHLEFRGGVFFLGQNFLGS*SNGALG
Trigger: TCCAAGTGCTCCATTGGATCAGCTTCCCAGGAAGTT...CTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp GCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGGTACTAACCCGAAGCTaGACTTCCTGGGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: ADPMEHLEFRGGVFFLGQVLTRS*TSWEAD
Trigger: ATCAGCTTCCCAGGAAGTTCAGCTTCGGGTTAGTAC...CTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGCCAGCAGAAGGCACCTaGGCACCTTGCTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLPAEGT*APCCLH
Trigger: GTGCAGGCAGCAAGGTGCCCAGGTGCCTTCTGCTGG...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAATGCAGCAAGGAGCCATaGTGGAAGGCCGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKCSKEP*WKAAMS
Trigger: GGACATGGCGGCCTTCCAGCATGGCTCCTTGCTGCA...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTGCACCCCCGATCACATaGCGCCTCTCGAAGACGGCG +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTAPPIT*RLSKTA
Trigger: CGCCGTCTTCGAGAGGCGCCATGTGATCGGGGGTGC...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAAAGCAAGGAGCCATGCTaGAAGGCCGCCATGTCCACG +
Preference number: 4 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKSKEPC*KAAMST
Trigger: CGTGGACATGGCGGCCTTCCAGCATGGCTCCTTGCT...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAGGGCCGCCAGGAAGCTaGGCAGCCTGTCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: LVLIKQNQSMYGGMGIRSGPPGS*AACLRP
Trigger: TGGCCGTAGACAGGCTGCCCAGCTTCCTGGCGGCCC...TGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGACTTGCAGCCATTTCTaGCCCAGGCTGGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLTCSHF*PRLGLA
Trigger: AGCAAGGCCCAGCCTGGGGCAGAAATGGCTGCAAGT...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACCTGGGCACCTTGCTaGCTGCACCCTCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCTWAPC*LHPLPA
Trigger: TGCTGGAAGAGGGTGCAGGCAGCAAGGTGCCCAGGT...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAATCCATGTGTGGTGGCTaGGCTTGCGATCGCATCAGA +
Preference number: 4 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKSMCGG*ACDRIR
Trigger: TCTGATGCGATCGCAAGCTCAGCCACCACACATGGA...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGCAACCACAGAGTCCTTaGAGCCAGGGGCATAGACCT +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLQPQSP*SQGHRP
Trigger: AGGTCTATGCCCCTGGCTTCAAGGACTCTGTGGTTG...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGCAGTCCGTTGTGTCCTaGTCCTATCACCACCGCATC +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLQSVVS*SYHHRI
Trigger: GATGCGGTGGTGATAGGAGCAGGACACAACGGACTG...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTTCACCCCCAGTCTCTaGAGGTACGCTGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTFTPSL*RYAAAT
Trigger: GGTGGCTGCAGCGTACCTGCAGAGACTGGGGGTGAA...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTCTCCTCAGTGACAGCTaGACCCCCGATCACATGGCG +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTLLSDS*TPDHMA
Trigger: CGCCATGTGATCGGGGGTGCAGCTGTCACTGAGGAG...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAAAAAGGCCACATGTGCTaGATTTCGCCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKKGHMC*ISPSSS
Trigger: GGAGCTGCTGGGCGAAATGCAGCACATGTGGCCTTT...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGAGGAAGCCACTCCTGTaGCGTCAGCTTCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLRKPLL*RQLQEG
Trigger: ACCTTCCTGAAGCTGACGCCACAGGAGTGGCTTCCT...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAATCAATCACAGGCCTGTaGGAAGGCAGGCCATCCATG +
Preference number: 4 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKSITGL*EGRPSM
Trigger: CATGGATGGCCTGCCTTCCCACAGGCCTGTGATTGA...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACAAGAGGGAGACTACATaGCAGCCAGGGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SFNKTEPVHVWRHGHKVNKRETT*QPGGAR
Trigger: CCTGGCTCCCCCTGGCTGCCATGTAGTCTCCCTCTT...GTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp ATATTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGCCTTCAGCAGGGGCTTaGGGGTGGAGAGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: ILVLIKQNQSMYGGMGIRPSAGA*GWRATS
Trigger: TGAGGTCGCTCTCCACCCTCAAGCCCCTGCTGAAGG...CCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGAGGGCATGTACTGAGTaGAGAGGGAGACTACATGGC +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLRACTE*RGRLHG
Trigger: GCCATGTAGTCTCCCTCTTCACTCAGTACATGCCCT...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGCACAGTTCAGGTGGATaGAGCATTGGTGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLHSSGG*SIGDGA
Trigger: TGCCCCATCACCAATGCTCCATCCACCTGAACTGTG...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAATCAGACTCGAACCACTaGTCCAGCACCTTGGTAATG +
Preference number: 4 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKSDSNH*SSTLVM
Trigger: CATTACCAAGGTGCTGGATCAGTGGTTCGAGTCTGA...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCAGCGACCTCATCCTTTaGAGCAAGGAGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFSDLIL*SKEPCW
Trigger: CCAGCATGGCTCCTTGCTGCAAAGGATGAGGTCGCT...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCCTAAAGGCCACATGTaGTGCATTTCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFPKGHM*CISPSS
Trigger: GCTGCTGGGCGAAATGCAGCACATGTGGCCTTTAGG...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCCCAGCAGAGGGTCAATaGCTAATGCCAAGCGATGCA +
Preference number: 4 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCPAEGQ*LMPSDA
Trigger: TGCATCGCTTGGCATTAGCCATTGACCCTCTGCTGG...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGTGTGGGGACTTGTCATaGCTCCAATCACTGCATCTG +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLCGDLS*LQSLHL
Trigger: CAGATGCAGTGATTGGAGCCATGACAAGTCCCCACA...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCAGGGACATGGCGCAGTaGAATATGTTCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCRDMAQ*NMFPPG
Trigger: TCCTGGAGGGAACATATTCCACTGCGCCATGTCCCT...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTGCTGGTCCAGGGACATaGCGCAGTGGAATATGTTCC +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTAGPGT*RSGICS
Trigger: GGAACATATTCCACTGCGCCATGTCCCTGGACCAGC...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCGTGGAGTCTTCTTCCTaGGTCAGAGCTGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFVESSS*VRAGSG
Trigger: CCCTGAACCAGCTCTGACCCAGGAAGAAGACTCCAC...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGGGGAAGCTGATCCAATaGAGCACTTGGAATTCAGGG +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLGKLIQ*STWNSG
Trigger: CCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCC...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTCAGCTTCAGGAAGGTaGTCTGCGGTGATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTSASGR*SAVMCW
Trigger: CCAACACATCACCGCAGATCACCTTCCTGAAGCTGA...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp ATATTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGGACCGGGTGTCCAGCTaGGAGATTCTCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ILVLIKQNQSMYGGMGIRDRVSS*EILSRN
Trigger: GTTCCTGGAGAGAATCTCTCAGCTGGACACCCGGTC...CCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCCCTTCACTGTTCACCTaGACCTTCGCCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCPSLFT*TFATVF
Trigger: AAAGACAGTGGCGAAGGTGCAGGTGAACAGTGAAGG...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCTTCAGGAAGGTGATCTaGGGTGATGTGTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCFRKVI*GDVLDS
Trigger: GCTGTCCAACACATCACCGCAGATCACCTTCCTGAA...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAGCTTCAGACCTCCCCTaGCTTCCGTGTTATCTCGTC +
Preference number: 4 (lower is better)
Translates to: LVLIKQNQSMYGGMGIRSASDLP*LPCYLV
Trigger: GACGAGATAACACGGAAGCCAGGGGAGGTCTGAAGC...TGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCTCCTTCTGGGAGAACTaGGCGATCTGCTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCSFWEN*AICFWF
Trigger: AAACCAGAAGCAGATCGCCCAGTTCTCCCAGAAGGA...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGATGCCAAGCGATGCATaGACTCCTCATATTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLMPSDA*TPHIWE
Trigger: TTCCCAAATATGAGGAGTTCATGCATCGCTTGGCAT...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCTTCTCACCTCTGTaGCATCTTCCAGCACAACTC +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTCFSPL*HLPAQL
Trigger: GAGTTGTGCTGGAAGATGGCACAGAGGTGAGAAGCA...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCATTGCTCCATGTGTGGTaGCTGAGCTTGCGATCGCAT +
Preference number: 4 (lower is better)
Translates to: LVLIKQNQSMYGGMGIRSLLHVW*LSLRSH
Trigger: ATGCGATCGCAAGCTCAGCCACCACACATGGAGCAA...TGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTGAACCAGTCCATGTATaGAGGCATGGGCATAAGGTC +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTEPVHV*RHGHKV
Trigger: GACCTTATGCCCATGCCTCCATACATGGACTGGTTC...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR TCA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCCACTGTCTTTTCAGTaGAGATGCTTGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFPLSFQ*RCLLHV
Trigger: CACATGGAGCAAGCATCTTCACTGAAAAGACAGTGG...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGGACAGCACCATTTTaGTTCTCACCTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTWTAPF*FSPLCH
Trigger: ATGGCACAGAGGTGAGAAGCAAAATGGTGCTGTCCA...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTGGGCATAGACCTCGATaGAATCAAACACTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTGHRPR*NQTLCL
Trigger: CAGACAGAGTGTTTGATTGCATCGAGGTCTATGCCC...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTGGAGAACTTAAACCCTaGGATGATCTCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTGELKP*DDLLSD
Trigger: GTCACTGAGGAGATCATCCCAGGGTTTAAGTTCTCC...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCTATTTGGGAAAGACCTaGGCATCCTTCTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFYLGKT*ASFWEN
Trigger: GTTCTCCCAGAAGGATGCCCAGGTCTTTCCCAAATA...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCCATCTGTGGCTAGAGTaGCTTTTAAAGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCHLWLE*LLKAQT
Trigger: AGTCTGAGCCTTTAAAAGCCACTCTAGCCACAGATG...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTCTGCGGTGATGTGTTaGACAGCACCATTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SFNKTEPVHVWRHGHKVNSAVMC*TAPFCF
Trigger: GAAGCAAAATGGTGCTGTCCAACACATCACCGCAGA...GTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAAAGGCAGGCCATCCATaGCATCTTCAAAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LVLIKQNQSMYGGMGIRSKAGHP*HLQRPD
Trigger: ATCAGGCCTTTGAAGATGCCATGGATGGCCTGCCTT...TGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp AGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACATCAAACACTCTGTCTaGATAAGCGTCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SFNKTEPVHVWRHGHKVNIKHSV*ISVSLL
Trigger: CAGGAGAGAGACGCTTATGCAGACAGAGTGTTTGAT...GTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp ATATTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTGGGCGATCTGCTTCTaGTTTTCTGCCATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ILVLIKQNQSMYGGMGIRWAICF*FSAMSV
Trigger: CACAGACATGGCAGAAAACCAGAAGCAGATCGCCCA...CCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp TTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAATCCAATGGAGCACTTaGAATTCAGGGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LVLIKQNQSMYGGMGIRSIQWST*NSGVES
Trigger: AGACTCCACCCCTGAATTCCAAGTGCTCCATTGGAT...TGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CCA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCAATCACTGCATCTGTaGCTAGAGTGGCTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFQSLHL*LEWLLK
Trigger: CTTTAAAAGCCACTCTAGCCACAGATGCAGTGATTG...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR GCA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTGGCATAAGGTCAACTTaGACTAAATGTAACTCGTAC +
Preference number: 4 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTGIRST*TKCNSY
Trigger: GTACGAGTTACATTTAGTGCAAGTTGACCTTATGCC...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS GCA 90 bp CGGGAAGGGAGAGGCGGCCACAGCCTTGCAGAGACCTCGGCCACTTaGAGCCATTTCTGCCCCAGGCTGGGCCTTGCTAGGCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: REGRGGHSLAETSAT*SHFCPRLGLARQGV
Trigger: AACTCCCTGCCTAGCAAGGCCCAGCCTGGGGCAGAAATGGCTGCAAGTGGCCGAGGTCTCTGCAAGGCTGTGGCCGCCTCTCCCTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS GCA 90 bp GGCTTGAGGGTGGAGAGCGACCTCATCCTTTGCAGCAAGGAGCCATaGTGGAAGGCCGCCATGTCCACGGGGGCCGCATCCAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GLRVESDLILCSKEP*WKAAMSTGAASSRG
Trigger: CCCTCTGCTGGATGCGGCCCCCGTGGACATGGCGGCCTTCCAGCATGGCTCCTTGCTGCAAAGGATGAGGTCGCTCTCCACCCTCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 90 bp TGTTATCTCGTCTCCACGCCGGGAAGGGAGAGGCGGCCACAGCCTTaGAGAGACCTCGGCCACTTGCAGCCATTTCTGCCCCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: CYLVSTPGRERRPQP*RDLGHLQPFLPQAG
Trigger: CCCAGCCTGGGGCAGAAATGGCTGCAAGTGGCCGAGGTCTCTGCAAGGCTGTGGCCGCCTCTCCCTTCCCGGCGTGGAGACGAGATAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000462874.1
CDS CCA 90 bp TTGAGGGTGGAGAGCGACCTCATCCTTTGCAGCAAGGAGCCATGCTaGAAGGCCGCCATGTCCACGGGGGCCGCATCCAGCAGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LRVESDLILCSKEPC*KAAMSTGAASSRGS
Trigger: TGACCCTCTGCTGGATGCGGCCCCCGTGGACATGGCGGCCTTCCAGCATGGCTCCTTGCTGCAAAGGATGAGGTCGCTCTCCACCCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 90 bp CCAGGCCACACAGCAGAGCCAGCACCGGAATCCCAGGTGCCTGCCTaGTCCTATCACCACCGCATCATACTCAGGCTTCAGACCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PGHTAEPAPESQVPA*SYHHRIILRLQTSP
Trigger: AGGGGAGGTCTGAAGCCTGAGTATGATGCGGTGGTGATAGGAGCAGGCAGGCACCTGGGATTCCGGTGCTGGCTCTGCTGTGTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS GCA 90 bp TGCCCCAGGCCACACAGCAGAGCCAGCACCGGAATCCCAGGTGCCTaGCTGCTCCTATCACCACCGCATCATACTCAGGCTTCAGACCTC +
Preference number: 5 (lower is better)
Translates to: CPRPHSRASTGIPGA*LLLSPPHHTQASDL
Trigger: GAGGTCTGAAGCCTGAGTATGATGCGGTGGTGATAGGAGCAGGCAGGCACCTGGGATTCCGGTGCTGGCTCTGCTGTGTGGCCTGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS CCA 90 bp AACCCTGGGATGATCTCCTCAGTGACAGCTGCACCCCCGATCACATaGCGCCTCTCGAAGACGGCGGTGTTCACCCCCAGTCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NPGMISSVTAAPPIT*RLSKTAVFTPSLCR
Trigger: CCTGCAGAGACTGGGGGTGAACACCGCCGTCTTCGAGAGGCGCCATGTGATCGGGGGTGCAGCTGTCACTGAGGAGATCATCCCAGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 90 bp GGAGCAGCACGGTTGAGTTGGCAAGCAGGAGAAGCAATGGGTGGCTaGCATGCTGCTGCGCCAACGTCCCGTCTCGCATGGCAGCATCAG +
Preference number: 5 (lower is better)
Translates to: GAARLSWQAGEAMGG*HAAAPTSRLAWQHQ
Trigger: CTGATGCTGCCATGCGAGACGGGACGTTGGCGCAGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAACCGTGCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 90 bp CTCCTTCCCAGGCTGCTGAGAGCCACACGCCCAGGGCCAGTGAAGTaGGATCAAGTGGGGAGGTACTCACAGCCACCAGTCCGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: LLPRLLRATRPGPVK*DQVGRYSQPPVRCV
Trigger: GACACAACGGACTGGTGGCTGTGAGTACCTCCCCACTTGATCCCACTTCACTGGCCCTGGGCGTGTGGCTCTCAGCAGCCTGGGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 90 bp CGCGCGGGAGAACTTAAACCCTGGGATGATCTCCTCAGTGACAGCTaGACCCCCGATCACATGGCGCCTCTCGAAGACGGCGGTGTTCAC +
Preference number: 5 (lower is better)
Translates to: RAGELKPWDDLLSDS*TPDHMAPLEDGGVH
Trigger: GTGAACACCGCCGTCTTCGAGAGGCGCCATGTGATCGGGGGTGCAGCTGTCACTGAGGAGATCATCCCAGGGTTTAAGTTCTCCCGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 90 bp TGCCATGTCTGTGCCCAGCAGAAGGCACCTGGGCACCTTGCTGCCTaGACCCTCTTCCAGCATGGGGGTGAAGGAGTAGGGGTTTCGAAG +
Preference number: 5 (lower is better)
Translates to: CHVCAQQKAPGHLAA*TLFQHGGEGVGVSK
Trigger: CTTCGAAACCCCTACTCCTTCACCCCCATGCTGGAAGAGGGTGCAGGCAGCAAGGTGCCCAGGTGCCTTCTGCTGGGCACAGACATGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 90 bp GTTGAGTTGGCAAGCAGGAGAAGCAATGGGTGGCTGGCATGCTGCTaGGCCAACGTCCCGTCTCGCATGGCAGCATCAGCATCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: VELASRRSNGWLACC*ANVPSRMAASASRG
Trigger: TCCCCTGGATGCTGATGCTGCCATGCGAGACGGGACGTTGGCGCAGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 90 bp ACGGTTGAGTTGGCAAGCAGGAGAAGCAATGGGTGGCTGGCATGCTaGTGCGCCAACGTCCCGTCTCGCATGGCAGCATCAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: TVELASRRSNGWLAC*CANVPSRMAASASR
Trigger: CCTGGATGCTGATGCTGCCATGCGAGACGGGACGTTGGCGCAGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 90 bp CTGCTCCTATCACCACCGCATCATACTCAGGCTTCAGACCTCCCCTaGCTTCCGTGTTATCTCGTCTCCACGCCGGGAAGGGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LLLSPPHHTQASDLP*LPCYLVSTPGRERR
Trigger: CCGCCTCTCCCTTCCCGGCGTGGAGACGAGATAACACGGAAGCCAGGGGAGGTCTGAAGCCTGAGTATGATGCGGTGGTGATAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000462874.1
CDS CCA 90 bp TGGGAGGCGCAAGTGATGGTGTCTGAGGGAGCAGCACGGTTGAGTTaGCAAGCAGGAGAAGCAATGGGTGGCTGGCATGCTGCTGCGCCA +
Preference number: 5 (lower is better)
Translates to: WEAQVMVSEGAARLS*QAGEAMGGWHAAAP
Trigger: TGGCGCAGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAACCGTGCTGCTCCCTCAGACACCATCACTTGCGCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS TCA 90 bp CTGCAGGGGGACACAGGCTGGAGGTCCGGGAATGGAGATGATGACTaGGTTCAGCTGCCCCCAGCCTGGAGGTTTCTCACTCAGATGGGT +
Preference number: 5 (lower is better)
Translates to: LQGDTGWRSGNGDDD*VQLPPAWRFLTQMG
Trigger: ACCCATCTGAGTGAGAAACCTCCAGGCTGGGGGCAGCTGAACTCAGTCATCATCTCCATTCCCGGACCTCCAGCCTGTGTCCCCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 90 bp CTGGGCATCCTTCTGGGAGAACTGGGCGATCTGCTTCTGGTTTTCTaGCATGTCTGTGCCCAGCAGAAGGCACCTGGGCACCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LGILLGELGDLLLVF*HVCAQQKAPGHLAA
Trigger: GGCAGCAAGGTGCCCAGGTGCCTTCTGCTGGGCACAGACATGGCAGAAAACCAGAAGCAGATCGCCCAGTTCTCCCAGAAGGATGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 90 bp CATTTGCCCCAGGCCACACAGCAGAGCCAGCACCGGAATCCCAGGTaGCTGCCTGCTCCTATCACCACCGCATCATACTCAGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: HLPQATQQSQHRNPR*LPAPITTASYSGFR
Trigger: TCTGAAGCCTGAGTATGATGCGGTGGTGATAGGAGCAGGCAGGCACCTGGGATTCCGGTGCTGGCTCTGCTGTGTGGCCTGGGGCAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS CCA 90 bp CAAAGGCCTGATGAAGGAGGAGGGTGTCTTCACAGTTCAGGTGGATaGAGCATTGGTGATGGGGCAGCGGCTGGCCCCTGGGAGCATTGG +
Preference number: 5 (lower is better)
Translates to: QRPDEGGGCLHSSGG*SIGDGAAAGPWEHW
Trigger: CCAATGCTCCCAGGGGCCAGCCGCTGCCCCATCACCAATGCTCCATCCACCTGAACTGTGAAGACACCCTCCTCCTTCATCAGGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 90 bp CATCGCCAGGGCTTCCATTGCTTGGGAGGCGCAAGTGATGGTGTCTaGGGGAGCAGCACGGTTGAGTTGGCAAGCAGGAGAAGCAATGGG +
Preference number: 5 (lower is better)
Translates to: HRQGFHCLGGASDGV*GSSTVELASRRSNG
Trigger: CCCATTGCTTCTCCTGCTTGCCAACTCAACCGTGCTGCTCCCTCAGACACCATCACTTGCGCCTCCCAAGCAATGGAAGCCCTGGCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 90 bp GGAAAGACCTGGGCATCCTTCTGGGAGAACTGGGCGATCTGCTTCTaGTTTTCTGCCATGTCTGTGCCCAGCAGAAGGCACCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: GKTWASFWENWAICF*FSAMSVPSRRHLGT
Trigger: GGTGCCCAGGTGCCTTCTGCTGGGCACAGACATGGCAGAAAACCAGAAGCAGATCGCCCAGTTCTCCCAGAAGGATGCCCAGGTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS-3UTR CAA 90 bp CCTGGGAAGCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCGCCCCAGGCTGGGCCTaGCTAGGCAGGGAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: PGKLIQWSTWNSGVESSSAPGWA*LGREFA
Trigger: AGCAAACTCCCTGCCTAGCAAGGCCCAGCCTGGGGC...GGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGCTTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp GCTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTGGGTCAGGAGGCGGCCACAGCCTaGCAGAGACCTCGGCCACTT +
Preference number: 5 (lower is better)
Translates to: ADPMEHLEFRGGVFFLGQEAATA*QRPRPL
Trigger: AAGTGGCCGAGGTCTCTGCAAGGCTGTGGCCGCCTC...CTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS TCA 90 bp TCTACGGCCACATTGATCTTGGTGACAGGCGACCGGGTGTCCAGCTaGGAGATTCTCTCCAGGAACTCCTCAGGAAGCCACTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: STATLILVTGDRVSS*EILSRNSSGSHSCG
Trigger: GCCACAGGAGTGGCTTCCTGAGGAGTTCCTGGAGAGAATCTCTCAGCTGGACACCCGGTCGCCTGTCACCAAGATCAATGTGGCCGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS GCA 90 bp GCTGGTTCAGGGTCACATGCTCTTGAGGTCCCTAAAGGCCACATGTaGTGCATTTCGCCCAGCAGCTCCCATCACACCTCCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: AGSGSHALEVPKGHM*CISPSSSHHTSSRM
Trigger: CATCCTGGAGGAGGTGTGATGGGAGCTGCTGGGCGAAATGCAGCACATGTGGCCTTTAGGGACCTCAAGAGCATGTGACCCTGAACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 90 bp TGCCTCTTACCATTGATCTTGGTGACAGGCGACCGGGTGTCCAGCTaGGAGATTCTCTCCAGGAACTCCTCAGGAAGCCACTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: CLLPLILVTGDRVSS*EILSRNSSGSHSCG
Trigger: GCCACAGGAGTGGCTTCCTGAGGAGTTCCTGGAGAGAATCTCTCAGCTGGACACCCGGTCGCCTGTCACCAAGATCAATGGTAAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 90 bp TGTCTCTCTGGCTCATGCGTCTCCTTTGGTTCGTGCAGTCAGCTGTaGTCTGTCTGCATAAGCGTCTCTCTCCTGCTCGTCCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: CLSGSCVSFGSCSQL*SVCISVSLLLVPGL
Trigger: AAGGCCTGGGACGAGCAGGAGAGAGACGCTTATGCAGACAGAGCACAGCTGACTGCACGAACCAAAGGAGACGCATGAGCCAGAGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS GCA 90 bp ACGGGGGCCGCATCCAGCAGAGGGTCAATGGCTAATGCCAAGCGATaGATGAACTCCTCATATTTGGGAAAGACCTGGGCATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: TGAASSRGSMANAKR*MNSSYLGKTWASFW
Trigger: CCAGAAGGATGCCCAGGTCTTTCCCAAATATGAGGAGTTCATGCATCGCTTGGCATTAGCCATTGACCCTCTGCTGGATGCGGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 90 bp GGGCCGCATCCAGCAGAGGGTCAATGGCTAATGCCAAGCGATGCATaGACTCCTCATATTTGGGAAAGACCTGGGCATCCTTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: GPHPAEGQWLMPSDA*TPHIWERPGHPSGR
Trigger: TCTCCCAGAAGGATGCCCAGGTCTTTCCCAAATATGAGGAGTTCATGCATCGCTTGGCATTAGCCATTGACCCTCTGCTGGATGCGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 90 bp AGGAAGCCACTCCTGTGGCGTCAGCTTCAGGAAGGTGATCTGCGGTaGTGTGTTGGACAGCACCATTTTGCTTCTCACCTCTGTGCCATC +
Preference number: 5 (lower is better)
Translates to: RKPLLWRQLQEGDLR*CVGQHHFASHLCAI
Trigger: GATGGCACAGAGGTGAGAAGCAAAATGGTGCTGTCCAACACATCACCGCAGATCACCTTCCTGAAGCTGACGCCACAGGAGTGGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 90 bp GAAAGCCTTCCTTGTCTCTCTGGCTCATGCGTCTCCTTTGGTTCGTaGAGTCAGCTGTGCTCTGTCTGCATAAGCGTCTCTCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ESLPCLSGSCVSFGS*SQLCSVCISVSLLL
Trigger: GAGCAGGAGAGAGACGCTTATGCAGACAGAGCACAGCTGACTGCACGAACCAAAGGAGACGCATGAGCCAGAGAGACAAGGAAGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS GCA 90 bp AGTCTCTGCAGGTACGCTGCCTGCTCTCATGCTGTGTTGGTTACATaGTTCCCCACCTTGTCAGCTTGTTTCTGGAAGCTCCCTGACTCC +
Preference number: 5 (lower is better)
Translates to: SLCRYAACSHAVLVT*FPTLSACFWKLPDS
Trigger: GGAGTCAGGGAGCTTCCAGAAACAAGCTGACAAGGTGGGGAAGCATGTAACCAACACAGCATGAGAGCAGGCAGCGTACCTGCAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS TCA 90 bp CCTTTGCTGCCTGGCCAGCTCCTAGTCATCCTTGGAAACCCAGCTTaGCCATCCCTTCCTTTGAAAGCCTTCCTTGTCTCTCTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: PLLPGQLLVILGNPA*PSLPLKAFLVSLAH
Trigger: ATGAGCCAGAGAGACAAGGAAGGCTTTCAAAGGAAGGGATGGTCAAGCTGGGTTTCCAAGGATGACTAGGAGCTGGCCAGGCAGCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS GCA 90 bp TGGCTTTGGCATCTCACGTTCCACACCAAGCCCCTGGGTAGCAAGTaGCTCTCCAGCTCTGATAAGCTCAGAATCACCTGGAAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: WLWHLTFHTKPLGSK*LSSSDKLRITWKVV
Trigger: TACAACCTTCCAGGTGATTCTGAGCTTATCAGAGCTGGAGAGGCACTTGCTACCCAGGGGCTTGGTGTGGAACGTGAGATGCCAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 90 bp CATGGCAGCATCAGCATCCAGGGGAGTGCTGGTCATGTAGGTAGTTaGTATCAAGCGCGGCTTGTTTTGTCCACGTGTGGTTCACAATCG +
Preference number: 5 (lower is better)
Translates to: HGSISIQGSAGHVGS*YQARLVLSTCGSQS
Trigger: CGATTGTGAACCACACGTGGACAAAACAAGCCGCGCTTGATAGCAACTACCTACATGACCAGCACTCCCCTGGATGCTGATGCTGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 90 bp TTTCTCACTCAGATGGGTCAAAGGAGACAGTGCTGCAATGTGGTGTaGCTCTTACCATTGATCTTGGTGACAGGCGACCGGGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FLTQMGQRRQCCNVV*LLPLILVTGDRVSS
Trigger: GCTGGACACCCGGTCGCCTGTCACCAAGATCAATGGTAAGAGGCACACCACATTGCAGCACTGTCTCCTTTGACCCATCTGAGTGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 90 bp CCAGCCTGGAGGTTTCTCACTCAGATGGGTCAAAGGAGACAGTGCTaGAATGTGGTGTGCCTCTTACCATTGATCTTGGTGACAGGCGAC +
Preference number: 5 (lower is better)
Translates to: PAWRFLTQMGQRRQC*NVVCLLPLILVTGD
Trigger: GTCGCCTGTCACCAAGATCAATGGTAAGAGGCACACCACATTGCAGCACTGTCTCCTTTGACCCATCTGAGTGAGAAACCTCCAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 90 bp TGCCGTCTGCTTTCGGTCCCGTCATTATCTCTGTATAGACCCAGTTaGCAATCATGCATTTGGGGCCCTCTGCTCCTATCACCACCGCAT +
Preference number: 5 (lower is better)
Translates to: CRLLSVPSLSLYRPS*QSCIWGPLLLSPPH
Trigger: ATGCGGTGGTGATAGGAGCAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAATGACGGGACCGAAAGCAGACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462874.1
CDS CCA 90 bp AGGCCTGAATTTGGCTTTGGCATCTCACGTTCCACACCAAGCCCCTaGGTAGCAAGTGCCTCTCCAGCTCTGATAAGCTCAGAATCACCT +
Preference number: 5 (lower is better)
Translates to: RPEFGFGISRSTPSP*VASASPALISSESP
Trigger: AGGTGATTCTGAGCTTATCAGAGCTGGAGAGGCACTTGCTACCCAGGGGCTTGGTGTGGAACGTGAGATGCCAAAGCCAAATTCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 90 bp TGTGGGGACTTGTCATGGCTCCAATCACTGCATCTGTGGCTAGAGTaGCTTTTAAAGGCTCAGACTCGAACCACTGATCCAGCACCTTGG +
Preference number: 5 (lower is better)
Translates to: CGDLSWLQSLHLWLE*LLKAQTRTTDPAPW
Trigger: CCAAGGTGCTGGATCAGTGGTTCGAGTCTGAGCCTTTAAAAGCCACTCTAGCCACAGATGCAGTGATTGGAGCCATGACAAGTCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 90 bp GTGGAATATGTTCCCTCCAGGAAGCCCGAAGATTCTCTCCAAATCTaGTGGTGTGAGGATGTCTCTGCCAACCACAGAGTCCTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: VEYVPSRKPEDSLQI*WCEDVSANHRVLEA
Trigger: GGCTTCAAGGACTCTGTGGTTGGCAGAGACATCCTCACACCACCAGATTTGGAGAGAATCTTCGGGCTTCCTGGAGGGAACATATTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 90 bp CTGATCCAATGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTaGGTCAGAGCTGGTTCAGGGTCACATGCTCTTGAGGTCCCTAAA +
Preference number: 5 (lower is better)
Translates to: LIQWSTWNSGVESSS*VRAGSGSHALEVPK
Trigger: TTTAGGGACCTCAAGAGCATGTGACCCTGAACCAGCTCTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCATTGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 90 bp TTGCTTGGAATGCCCTTTGCTGCCTGGCCAGCTCCTAGTCATCCTTaGAAACCCAGCTTGACCATCCCTTCCTTTGAAAGCCTTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LLGMPFAAWPAPSHP*KPSLTIPSFESLPC
Trigger: ACAAGGAAGGCTTTCAAAGGAAGGGATGGTCAAGCTGGGTTTCCAAGGATGACTAGGAGCTGGCCAGGCAGCAAAGGGCATTCCAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS GCA 90 bp TTGACCATCCCTTCCTTTGAAAGCCTTCCTTGTCTCTCTGGCTCATaGGTCTCCTTTGGTTCGTGCAGTCAGCTGTGCTCTGTCTGCATA +
Preference number: 5 (lower is better)
Translates to: LTIPSFESLPCLSGS*VSFGSCSQLCSVCI
Trigger: TATGCAGACAGAGCACAGCTGACTGCACGAACCAAAGGAGACGCATGAGCCAGAGAGACAAGGAAGGCTTTCAAAGGAAGGGATGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS CCA 90 bp TGCCGTCTGCTTTCGGTCCCGTCATTATCTCTGTATAGACCCAGTTaGCAATCATGCATTTGGGGCCCTCTAGTCTTCCTGTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: CRLLSVPSLSLYRPS*QSCIWGPLVFLSFS
Trigger: GGAGAATGACAGGAAGACTAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAATGACGGGACCGAAAGCAGACGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS TCA 90 bp ACCATTTTGCTTCTCACCTCTGTGCCATCTTCCAGCACAACTCCTTaGACACAGCCTTCACTGTTCACCTGCACCTTCGCCACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: TILLLTSVPSSSTTP*TQPSLFTCTFATVF
Trigger: AAAGACAGTGGCGAAGGTGCAGGTGAACAGTGAAGGCTGTGTTCAAGGAGTTGTGCTGGAAGATGGCACAGAGGTGAGAAGCAAAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS-3UTR CAA 90 bp AATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCCTGGAGCGACCTCATCCTTaGCAGCAAGGAGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: NFLSIVVALCTNPKLNFLERPHP*QQGAML
Trigger: CAGCATGGCTCCTTGCTGCAAAGGATGAGGTCGCTC...CAGGAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp TTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCGTGTGGTGGCTGAGCTaGCGATCGCATCAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: LIKQNQSMYGGMGIRSTCVWWLS*RSHQRG
Trigger: CCCTCTCTGATGCGATCGCAAGCTCAGCCACCACAC...GCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS GCA 90 bp CTTTCGGTCCCGTCATTATCTCTGTATAGACCCAGTTGGCAATCATaGATTTGGGGCCCTCTAGTCTTCCTGTCATTCTCCATGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LSVPSLSLYRPSWQS*IWGPLVFLSFSMGR
Trigger: TCTTCCCATGGAGAATGACAGGAAGACTAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAATGACGGGACCGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS CCA 90 bp GTCCCGTCATTATCTCTGTATAGACCCAGTTGGCAATCATGCATTTaGGGCCCTCTAGTCTTCCTGTCATTCTCCATGGGAAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: VPSLSLYRPSWQSCI*GPLVFLSFSMGRSK
Trigger: CTTGGATCTTCCCATGGAGAATGACAGGAAGACTAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAATGACGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS-3UTR CAA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCAGAGACCTCGGCCACTaGCAGCCATTTCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFRDLGH*QPFLPQ
Trigger: CTGGGGCAGAAATGGCTGCAAGTGGCCGAGGTCTCT...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp AATAATTTCTTGAGCATTGTGGTGGCCTTATGTACTAACCCGAAGCTGAACTTCGCAGCCACCAGTCCGTaGTGTCCTGCTCCTATCACC +
Preference number: 5 (lower is better)
Translates to: NNFLSIVVALCTNPKLNFAATSP*CPAPIT
Trigger: GGTGATAGGAGCAGGACACAACGGACTGGTGGCTGC...GAAGTTCAGCTTCGGGTTAGTACATAAGGCCACCACAATGCTCAAGAAATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAACTGTCTACGGCCACATaGATCTTGGTGACAGGCGAC +
Preference number: 5 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKLSTAT*ILVTGD
Trigger: GTCGCCTGTCACCAAGATCAATGTGGCCGTAGACAG...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS GCA 90 bp ATGAAAATGAAGGCATGCCCTCAAAGCTGCATGTTGAGTGCCGTCTaGTTTCGGTCCCGTCATTATCTCTGTATAGACCCAGTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: MKMKACPQSCMLSAV*FRSRHYLCIDPVGN
Trigger: ATTGCCAACTGGGTCTATACAGAGATAATGACGGGACCGAAAGCAGACGGCACTCAACATGCAGCTTTGAGGGCATGCCTTCATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462874.1
ENST00000494941.1
CDS GCA 90 bp GCAACTGCTCTAGTACATATGAAAATGAAGGCATGCCCTCAAAGCTaGATGTTGAGTGCCGTCTGCTTTCGGTCCCGTCATTATCTCTGT +
Preference number: 5 (lower is better)
Translates to: ATALVHMKMKACPQS*MLSAVCFRSRHYLC
Trigger: ACAGAGATAATGACGGGACCGAAAGCAGACGGCACTCAACATGCAGCTTTGAGGGCATGCCTTCATTTTCATATGTACTAGAGCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462874.1
ENST00000494941.1
CDS-3UTR CAA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTCCGGAGTGTGGGGACTaGTCATGGCTCCAATCACTG +
Preference number: 5 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTPECGD*SWLQSL
Trigger: CAGTGATTGGAGCCATGACAAGTCCCCACACTCCGG...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS GCA 90 bp AGTACATATGAAAATGAAGGCATGCCCTCAAAGCTGCATGTTGAGTaGCGTCTGCTTTCGGTCCCGTCATTATCTCTGTATAGACCCAGT +
Preference number: 5 (lower is better)
Translates to: STYENEGMPSKLHVE*RLLSVPSLSLYRPS
Trigger: ACTGGGTCTATACAGAGATAATGACGGGACCGAAAGCAGACGGCACTCAACATGCAGCTTTGAGGGCATGCCTTCATTTTCATATGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462874.1
ENST00000494941.1
CDS-3UTR CAA 90 bp ATATTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGACGGCCACATTGATCTaGGTGACAGGCGACCGGGTG +
Preference number: 5 (lower is better)
Translates to: ILVLIKQNQSMYGGMGIRTATLI*VTGDRV
Trigger: CACCCGGTCGCCTGTCACCAAGATCAATGTGGCCGT...CCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTCAGGGTCACATGCTCTaGAGGTCCCTAAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTQGHML*RSLKAT
Trigger: TGTGGCCTTTAGGGACCTCAAGAGCATGTGACCCTG...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAAATGAACTCCTCATATTaGGGAAAGACCTGGGCATCC +
Preference number: 5 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKMNSSY*GKTWAS
Trigger: GGATGCCCAGGTCTTTCCCAAATATGAGGAGTTCAT...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp AAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTTGCACTAAATTCCAGCACAACTCCTaGAACACAGCCTTCACTGTT +
Preference number: 5 (lower is better)
Translates to: KQNQSMYGGMGIRSTCTKFQHNS*NTAFTV
Trigger: AACAGTGAAGGCTGTGTTCAAGGAGTTGTGCTGGAA...TTTAGTGCAAGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp TTAGTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCATTGGACAGCACCATTTaGCTTCTCACCTCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LVLIKQNQSMYGGMGIRSLDSTI*LLTSVP
Trigger: TGGCACAGAGGTGAGAAGCAAAATGGTGCTGTCCAA...TGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS-3UTR CAA 90 bp GTTTTAATAAAACAGAACCAGTCCATGTATGGAGGCATGGGCATAAGGTCAACTATCTGCGGTGATGTGTaGGACAGCACCATTTTGCTT +
Preference number: 5 (lower is better)
Translates to: VLIKQNQSMYGGMGIRSTICGDV*DSTILL
Trigger: AAGCAAAATGGTGCTGTCCAACACATCACCGCAGAT...AGTTGACCTTATGCCCATGCCTCCATACATGGACTGGTTCTGTTTTATTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS CCA 72 bp GCTGGCCCCTGGGAGCATTGGGGGCCGCCAGGAAGCTaGGCAGCCTGTCTACGGCCACTTCTGACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: AGPWEHWGPPGS*AACLRPLLTRL
Trigger: CAGCCTGGTCAGAAGTGGCCGTAGACAGGCTGCCCAGCTTCCTGGCGGCCCCCAATGCTCCCAGGGGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 72 bp AGAGGCGGCCACAGCCTTGCAGAGACCTCGGCCACTTaGAGCCATTTCTGCCCCAGGCTGGGCCTTGCTAGG +
Preference number: 6 (lower is better)
Translates to: RGGHSLAETSAT*SHFCPRLGLAR
Trigger: CCTAGCAAGGCCCAGCCTGGGGCAGAAATGGCTGCAAGTGGCCGAGGTCTCTGCAAGGCTGTGGCCGCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS GCA 72 bp GTGGAGAGCGACCTCATCCTTTGCAGCAAGGAGCCATaGTGGAAGGCCGCCATGTCCACGGGGGCCGCATCC +
Preference number: 6 (lower is better)
Translates to: VESDLILCSKEP*WKAAMSTGAAS
Trigger: GGATGCGGCCCCCGTGGACATGGCGGCCTTCCAGCATGGCTCCTTGCTGCAAAGGATGAGGTCGCTCTCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 72 bp GAGAGCGACCTCATCCTTTGCAGCAAGGAGCCATGCTaGAAGGCCGCCATGTCCACGGGGGCCGCATCCAGC +
Preference number: 6 (lower is better)
Translates to: ESDLILCSKEPC*KAAMSTGAASS
Trigger: GCTGGATGCGGCCCCCGTGGACATGGCGGCCTTCCAGCATGGCTCCTTGCTGCAAAGGATGAGGTCGCTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 72 bp GCACGGGGCGGGCGAAGTAGAGCTGGTCCAGGGACATaGCGCAGTGGAATATGTTCCCTCCAGGAAGCCCGA +
Preference number: 6 (lower is better)
Translates to: ARGGRSRAGPGT*RSGICSLQEAR
Trigger: TCGGGCTTCCTGGAGGGAACATATTCCACTGCGCCATGTCCCTGGACCAGCTCTACTTCGCCCGCCCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 72 bp GGCTGGCATGCTGCTGCGCCAACGTCCCGTCTCGCATaGCAGCATCAGCATCCAGGGGAGTGCTGGTCATGT +
Preference number: 6 (lower is better)
Translates to: GWHAAAPTSRLA*QHQHPGECWSC
Trigger: ACATGACCAGCACTCCCCTGGATGCTGATGCTGCCATGCGAGACGGGACGTTGGCGCAGCAGCATGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS TCA 72 bp AGGGTGTCTTCACAGTTCAGGTGGATGGAGCATTGGTaGTGGGGCAGCGGCTGGCCCCTGGGAGCATTGGGG +
Preference number: 6 (lower is better)
Translates to: RVSSQFRWMEHW*WGSGWPLGALG
Trigger: CCCCAATGCTCCCAGGGGCCAGCCGCTGCCCCATCACCAATGCTCCATCCACCTGAACTGTGAAGACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 72 bp GCAAGCAGGAGAAGCAATGGGTGGCTGGCATGCTGCTaGGCCAACGTCCCGTCTCGCATGGCAGCATCAGCA +
Preference number: 6 (lower is better)
Translates to: ASRRSNGWLACC*ANVPSRMAASA
Trigger: TGCTGATGCTGCCATGCGAGACGGGACGTTGGCGCAGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 72 bp CGGTTGAGTTGGCAAGCAGGAGAAGCAATGGGTGGCTaGCATGCTGCTGCGCCAACGTCCCGTCTCGCATGG +
Preference number: 6 (lower is better)
Translates to: RLSWQAGEAMGG*HAAAPTSRLAW
Trigger: CCATGCGAGACGGGACGTTGGCGCAGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 72 bp AGCACGGTTGAGTTGGCAAGCAGGAGAAGCAATGGGTaGCTGGCATGCTGCTGCGCCAACGTCCCGTCTCGC +
Preference number: 6 (lower is better)
Translates to: STVELASRRSNG*LACCCANVPSR
Trigger: GCGAGACGGGACGTTGGCGCAGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAACCGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 72 bp TTGGCAAGCAGGAGAAGCAATGGGTGGCTGGCATGCTaGTGCGCCAACGTCCCGTCTCGCATGGCAGCATCA +
Preference number: 6 (lower is better)
Translates to: LASRRSNGWLAC*CANVPSRMAAS
Trigger: TGATGCTGCCATGCGAGACGGGACGTTGGCGCAGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 72 bp CCACACAGCAGAGCCAGCACCGGAATCCCAGGTGCCTaGCTGCTCCTATCACCACCGCATCATACTCAGGCT +
Preference number: 6 (lower is better)
Translates to: PHSRASTGIPGA*LLLSPPHHTQA
Trigger: AGCCTGAGTATGATGCGGTGGTGATAGGAGCAGGCAGGCACCTGGGATTCCGGTGCTGGCTCTGCTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS CCA 72 bp ATGATCTCCTCAGTGACAGCTGCACCCCCGATCACATaGCGCCTCTCGAAGACGGCGGTGTTCACCCCCAGT +
Preference number: 6 (lower is better)
Translates to: MISSVTAAPPIT*RLSKTAVFTPS
Trigger: ACTGGGGGTGAACACCGCCGTCTTCGAGAGGCGCCATGTGATCGGGGGTGCAGCTGTCACTGAGGAGATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 72 bp GATGAAGGAGGAGGGTGTCTTCACAGTTCAGGTGGATaGAGCATTGGTGATGGGGCAGCGGCTGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: DEGGGCLHSSGG*SIGDGAAAGPW
Trigger: CCAGGGGCCAGCCGCTGCCCCATCACCAATGCTCCATCCACCTGAACTGTGAAGACACCCTCCTCCTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 72 bp CCTTGCCTCCAGCCAGCGTATAGGGCATGTACTGAGTaGAGAGGGAGACTACATGGCAGCCAGGGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: PCLQPAYRACTE*RGRLHGSQGEP
Trigger: TGGCTCCCCCTGGCTGCCATGTAGTCTCCCTCTTCACTCAGTACATGCCCTATACGCTGGCTGGAGGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS TCA 72 bp GGAAAGGAGCCTGTGATGTCCACAGCTGGCTGCAGATaGGCATTCGACCCAGCCCCCAGTCAGCACTGGAGA +
Preference number: 6 (lower is better)
Translates to: GKEPVMSTAGCR*AFDPAPSQHWR
Trigger: TCTCCAGTGCTGACTGGGGGCTGGGTCGAATGCTCATCTGCAGCCAGCTGTGGACATCACAGGCTCCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 72 bp TCACCACCGCATCATACTCAGGCTTCAGACCTCCCCTaGCTTCCGTGTTATCTCGTCTCCACGCCGGGAAGG +
Preference number: 6 (lower is better)
Translates to: SPPHHTQASDLP*LPCYLVSTPGR
Trigger: CCTTCCCGGCGTGGAGACGAGATAACACGGAAGCCAGGGGAGGTCTGAAGCCTGAGTATGATGCGGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000462874.1
CDS CAA 72 bp GAGGCGCAAGTGATGGTGTCTGAGGGAGCAGCACGGTaGAGTTGGCAAGCAGGAGAAGCAATGGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: EAQVMVSEGAAR*SWQAGEAMGGW
Trigger: CCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAACCGTGCTGCTCCCTCAGACACCATCACTTGCGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CAA 90 bp ATTGCTTGGGAGGCGCAAGTGATGGTGTCTGAGGGAGCAGCACGGTaGAGTTGGCAAGCAGGAGAAGCAATGGGTGGCTGGCATGCTGCT +
Preference number: 6 (lower is better)
Translates to: IAWEAQVMVSEGAAR*SWQAGEAMGGWHAA
Trigger: AGCAGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAACCGTGCTGCTCCCTCAGACACCATCACTTGCGCCTCCCAAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS TCA 72 bp GGCTTCCATTGCTTGGGAGGCGCAAGTGATGGTGTCTaGGGGAGCAGCACGGTTGAGTTGGCAAGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: GFHCLGGASDGV*GSSTVELASRR
Trigger: TCTCCTGCTTGCCAACTCAACCGTGCTGCTCCCTCAGACACCATCACTTGCGCCTCCCAAGCAATGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS TCA 72 bp GACACAGGCTGGAGGTCCGGGAATGGAGATGATGACTaGGTTCAGCTGCCCCCAGCCTGGAGGTTTCTCACT +
Preference number: 6 (lower is better)
Translates to: DTGWRSGNGDDD*VQLPPAWRFLT
Trigger: AGTGAGAAACCTCCAGGCTGGGGGCAGCTGAACTCAGTCATCATCTCCATTCCCGGACCTCCAGCCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 72 bp GAACTTAAACCCTGGGATGATCTCCTCAGTGACAGCTaGACCCCCGATCACATGGCGCCTCTCGAAGACGGC +
Preference number: 6 (lower is better)
Translates to: ELKPWDDLLSDS*TPDHMAPLEDG
Trigger: GCCGTCTTCGAGAGGCGCCATGTGATCGGGGGTGCAGCTGTCACTGAGGAGATCATCCCAGGGTTTAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 72 bp GGGTCACATGCTCTTGAGGTCCCTAAAGGCCACATGTaGTGCATTTCGCCCAGCAGCTCCCATCACACCTCC +
Preference number: 6 (lower is better)
Translates to: GSHALEVPKGHM*CISPSSSHHTS
Trigger: GGAGGTGTGATGGGAGCTGCTGGGCGAAATGCAGCACATGTGGCCTTTAGGGACCTCAAGAGCATGTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CAA 72 bp GCAGCAGCACATACCCACTCCCCGGAGTGTGGGGACTaGTCATGGCTCCAATCACTGCATCTGTGGCTAGAG +
Preference number: 6 (lower is better)
Translates to: AAAHTHSPECGD*SWLQSLHLWLE
Trigger: CTCTAGCCACAGATGCAGTGATTGGAGCCATGACAAGTCCCCACACTCCGGGGAGTGGGTATGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 72 bp CCATTGATCTTGGTGACAGGCGACCGGGTGTCCAGCTaGGAGATTCTCTCCAGGAACTCCTCAGGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: PLILVTGDRVSS*EILSRNSSGSH
Trigger: GTGGCTTCCTGAGGAGTTCCTGGAGAGAATCTCTCAGCTGGACACCCGGTCGCCTGTCACCAAGATCAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 72 bp TCACATGCTCTTGAGGTCCCTAAAGGCCACATGTGCTaGATTTCGCCCAGCAGCTCCCATCACACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SHALEVPKGHMC*ISPSSSHHTSS
Trigger: GGAGGAGGTGTGATGGGAGCTGCTGGGCGAAATGCAGCACATGTGGCCTTTAGGGACCTCAAGAGCATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 72 bp GGCTCATGCGTCTCCTTTGGTTCGTGCAGTCAGCTGTaGTCTGTCTGCATAAGCGTCTCTCTCCTGCTCGTC +
Preference number: 6 (lower is better)
Translates to: GSCVSFGSCSQL*SVCISVSLLLV
Trigger: GACGAGCAGGAGAGAGACGCTTATGCAGACAGAGCACAGCTGACTGCACGAACCAAAGGAGACGCATGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS CCA 72 bp GCACATACCCACTCCCCGGAGTGTGGGGACTTGTCATaGCTCCAATCACTGCATCTGTGGCTAGAGTGGCTT +
Preference number: 6 (lower is better)
Translates to: AHTHSPECGDLS*LQSLHLWLEWL
Trigger: AAGCCACTCTAGCCACAGATGCAGTGATTGGAGCCATGACAAGTCCCCACACTCCGGGGAGTGGGTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 72 bp ACATGGTGCAGCAGCACATACCCACTCCCCGGAGTGTaGGGACTTGTCATGGCTCCAATCACTGCATCTGTG +
Preference number: 6 (lower is better)
Translates to: TWCSSTYPLPGV*GLVMAPITASV
Trigger: CACAGATGCAGTGATTGGAGCCATGACAAGTCCCCACACTCCGGGGAGTGGGTATGTGCTGCTGCACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 72 bp CAAGTGATGGTGTCTGAGGGAGCAGCACGGTTGAGTTaGCAAGCAGGAGAAGCAATGGGTGGCTGGCATGCT +
Preference number: 6 (lower is better)
Translates to: QVMVSEGAARLS*QAGEAMGGWHA
Trigger: AGCATGCCAGCCACCCATTGCTTCTCCTGCTTGCCAACTCAACCGTGCTGCTCCCTCAGACACCATCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CAA 90 bp TGGAGTCTTCTTCCTGGGTCAGAGCTGGTTCAGGGTCACATGCTCTaGAGGTCCCTAAAGGCCACATGTGCTGCATTTCGCCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: WSLLPGSELVQGHML*RSLKATCAAFRPAA
Trigger: AGCTGCTGGGCGAAATGCAGCACATGTGGCCTTTAGGGACCTCAAGAGCATGTGACCCTGAACCAGCTCTGACCCAGGAAGAAGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 72 bp CTTTTCAGTGAAGATGCTTGCTCCATGTGTGGTGGCTaGGCTTGCGATCGCATCAGAGAGGGCACCCATGCC +
Preference number: 6 (lower is better)
Translates to: LFSEDACSMCGG*ACDRIREGTHA
Trigger: GGCATGGGTGCCCTCTCTGATGCGATCGCAAGCTCAGCCACCACACATGGAGCAAGCATCTTCACTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 72 bp CAGGAAGCCACTCCTGTGGCGTCAGCTTCAGGAAGGTaGTCTGCGGTGATGTGTTGGACAGCACCATTTTGC +
Preference number: 6 (lower is better)
Translates to: QEATPVASASGR*SAVMCWTAPFC
Trigger: GCAAAATGGTGCTGTCCAACACATCACCGCAGATCACCTTCCTGAAGCTGACGCCACAGGAGTGGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 72 bp ACATTGATCTTGGTGACAGGCGACCGGGTGTCCAGCTaGGAGATTCTCTCCAGGAACTCCTCAGGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: TLILVTGDRVSS*EILSRNSSGSH
Trigger: GTGGCTTCCTGAGGAGTTCCTGGAGAGAATCTCTCAGCTGGACACCCGGTCGCCTGTCACCAAGATCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370575.5
CDS CAA 72 bp CTTCCTGGGTCAGAGCTGGTTCAGGGTCACATGCTCTaGAGGTCCCTAAAGGCCACATGTGCTGCATTTCGC +
Preference number: 6 (lower is better)
Translates to: LPGSELVQGHML*RSLKATCAAFR
Trigger: GCGAAATGCAGCACATGTGGCCTTTAGGGACCTCAAGAGCATGTGACCCTGAACCAGCTCTGACCCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CAA 72 bp TGTGCTTCAGGGTGCCTTGAGCTGAGAGGCCTGAATTaGGCTTTGGCATCTCACGTTCCACACCAAGCCCCT +
Preference number: 6 (lower is better)
Translates to: CASGCLELRGLN*ALASHVPHQAP
Trigger: AGGGGCTTGGTGTGGAACGTGAGATGCCAAAGCCAAATTCAGGCCTCTCAGCTCAAGGCACCCTGAAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CAA 90 bp CACTCCTGTGGCGTCAGCTTCAGGAAGGTGATCTGCGGTGATGTGTaGGACAGCACCATTTTGCTTCTCACCTCTGTGCCATCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: HSCGVSFRKVICGDV*DSTILLLTSVPSSS
Trigger: GCTGGAAGATGGCACAGAGGTGAGAAGCAAAATGGTGCTGTCCAACACATCACCGCAGATCACCTTCCTGAAGCTGACGCCACAGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CAA 90 bp CCCTTTGCTGCCTGGCCAGCTCCTAGTCATCCTTGGAAACCCAGCTaGACCATCCCTTCCTTTGAAAGCCTTCCTTGTCTCTCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: PFAAWPAPSHPWKPS*TIPSFESLPCLSGS
Trigger: TGAGCCAGAGAGACAAGGAAGGCTTTCAAAGGAAGGGATGGTCAAGCTGGGTTTCCAAGGATGACTAGGAGCTGGCCAGGCAGCAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS CAA 90 bp GGGAGTGCTGGTCATGTAGGTAGTTGCTATCAAGCGCGGCTTGTTTaGTCCACGTGTGGTTCACAATCGGCACAGTGGTGCCCTAGAAGG +
Preference number: 6 (lower is better)
Translates to: GSAGHVGSCYQARLV*STCGSQSAQWCPRR
Trigger: CCTTCTAGGGCACCACTGTGCCGATTGTGAACCACACGTGGACAAAACAAGCCGCGCTTGATAGCAACTACCTACATGACCAGCACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS TCA 72 bp CTCCTGTGGCGTCAGCTTCAGGAAGGTGATCTGCGGTaGTGTGTTGGACAGCACCATTTTGCTTCTCACCTC +
Preference number: 6 (lower is better)
Translates to: LLWRQLQEGDLR*CVGQHHFASHL
Trigger: GAGGTGAGAAGCAAAATGGTGCTGTCCAACACATCACCGCAGATCACCTTCCTGAAGCTGACGCCACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS GCA 72 bp CCTTGTCTCTCTGGCTCATGCGTCTCCTTTGGTTCGTaGAGTCAGCTGTGCTCTGTCTGCATAAGCGTCTCT +
Preference number: 6 (lower is better)
Translates to: PCLSGSCVSFGS*SQLCSVCISVS
Trigger: AGAGACGCTTATGCAGACAGAGCACAGCTGACTGCACGAACCAAAGGAGACGCATGAGCCAGAGAGACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS GCA 72 bp CAGATGGGTCAAAGGAGACAGTGCTGCAATGTGGTGTaGCTCTTACCATTGATCTTGGTGACAGGCGACCGG +
Preference number: 6 (lower is better)
Translates to: QMGQRRQCCNVV*LLPLILVTGDR
Trigger: CCGGTCGCCTGTCACCAAGATCAATGGTAAGAGGCACACCACATTGCAGCACTGTCTCCTTTGACCCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CCA 72 bp TGGAGCACTTGGAATTCAGGGGTGGAGTCTTCTTCCTaGGTCAGAGCTGGTTCAGGGTCACATGCTCTTGAG +
Preference number: 6 (lower is better)
Translates to: WSTWNSGVESSS*VRAGSGSHALE
Trigger: CTCAAGAGCATGTGACCCTGAACCAGCTCTGACCCAGGAAGAAGACTCCACCCCTGAATTCCAAGTGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 72 bp TTTGGCTTTGGCATCTCACGTTCCACACCAAGCCCCTaGGTAGCAAGTGCCTCTCCAGCTCTGATAAGCTCA +
Preference number: 6 (lower is better)
Translates to: FGFGISRSTPSP*VASASPALISS
Trigger: TGAGCTTATCAGAGCTGGAGAGGCACTTGCTACCCAGGGGCTTGGTGTGGAACGTGAGATGCCAAAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CAA 72 bp GCTTCTCACCTCTGTGCCATCTTCCAGCACAACTCCTaGAACACAGCCTTCACTGTTCACCTGCACCTTCGC +
Preference number: 6 (lower is better)
Translates to: ASHLCAIFQHNS*NTAFTVHLHLR
Trigger: GCGAAGGTGCAGGTGAACAGTGAAGGCTGTGTTCAAGGAGTTGTGCTGGAAGATGGCACAGAGGTGAGAAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CAA 72 bp GGCGTCAGCTTCAGGAAGGTGATCTGCGGTGATGTGTaGGACAGCACCATTTTGCTTCTCACCTCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: GVSFRKVICGDV*DSTILLLTSVP
Trigger: TGGCACAGAGGTGAGAAGCAAAATGGTGCTGTCCAACACATCACCGCAGATCACCTTCCTGAAGCTGACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 72 bp CCTGGCCAGCTCCTAGTCATCCTTGGAAACCCAGCTTaGCCATCCCTTCCTTTGAAAGCCTTCCTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: PGQLLVILGNPA*PSLPLKAFLVS
Trigger: AGAGACAAGGAAGGCTTTCAAAGGAAGGGATGGTCAAGCTGGGTTTCCAAGGATGACTAGGAGCTGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS GCA 72 bp ATCAGCATCCAGGGGAGTGCTGGTCATGTAGGTAGTTaGTATCAAGCGCGGCTTGTTTTGTCCACGTGTGGT +
Preference number: 6 (lower is better)
Translates to: ISIQGSAGHVGS*YQARLVLSTCG
Trigger: ACCACACGTGGACAAAACAAGCCGCGCTTGATAGCAACTACCTACATGACCAGCACTCCCCTGGATGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 72 bp AGGTACGCTGCCTGCTCTCATGCTGTGTTGGTTACATaGTTCCCCACCTTGTCAGCTTGTTTCTGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: RYAACSHAVLVT*FPTLSACFWKL
Trigger: GAGCTTCCAGAAACAAGCTGACAAGGTGGGGAAGCATGTAACCAACACAGCATGAGAGCAGGCAGCGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CAA 72 bp GGTCATGTAGGTAGTTGCTATCAAGCGCGGCTTGTTTaGTCCACGTGTGGTTCACAATCGGCACAGTGGTGC +
Preference number: 6 (lower is better)
Translates to: GHVGSCYQARLV*STCGSQSAQWC
Trigger: GCACCACTGTGCCGATTGTGAACCACACGTGGACAAAACAAGCCGCGCTTGATAGCAACTACCTACATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CAA 72 bp AGTCTCTGCAGGTACGCTGCCTGCTCTCATGCTGTGTaGGTTACATGCTTCCCCACCTTGTCAGCTTGTTTC +
Preference number: 6 (lower is better)
Translates to: SLCRYAACSHAV*VTCFPTLSACF
Trigger: GAAACAAGCTGACAAGGTGGGGAAGCATGTAACCAACACAGCATGAGAGCAGGCAGCGTACCTGCAGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CAA 90 bp GCAAGTGCCTCTCCAGCTCTGATAAGCTCAGAATCACCTGGAAGGTaGTATAAATGTCGACTCCCACAGACCCCCTTCCCAGGAGTCTGT +
Preference number: 6 (lower is better)
Translates to: ASASPALISSESPGR*YKCRLPQTPFPGVC
Trigger: ACAGACTCCTGGGAAGGGGGTCTGTGGGAGTCGACATTTATACAACCTTCCAGGTGATTCTGAGCTTATCAGAGCTGGAGAGGCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS CAA 90 bp CACCATTTTGCTTCTCACCTCTGTGCCATCTTCCAGCACAACTCCTaGAACACAGCCTTCACTGTTCACCTGCACCTTCGCCACTGTCTT +
Preference number: 6 (lower is better)
Translates to: HHFASHLCAIFQHNS*NTAFTVHLHLRHCL
Trigger: AAGACAGTGGCGAAGGTGCAGGTGAACAGTGAAGGCTGTGTTCAAGGAGTTGTGCTGGAAGATGGCACAGAGGTGAGAAGCAAAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 72 bp CCAGCAGAGGGTCAATGGCTAATGCCAAGCGATGCATaGACTCCTCATATTTGGGAAAGACCTGGGCATCCT +
Preference number: 6 (lower is better)
Translates to: PAEGQWLMPSDA*TPHIWERPGHP
Trigger: AGGATGCCCAGGTCTTTCCCAAATATGAGGAGTTCATGCATCGCTTGGCATTAGCCATTGACCCTCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS TCA 72 bp TCATCCTTGGAAACCCAGCTTGACCATCCCTTCCTTTaGAAGCCTTCCTTGTCTCTCTGGCTCATGCGTCTC +
Preference number: 6 (lower is better)
Translates to: SSLETQLDHPFL*KPSLSLWLMRL
Trigger: GAGACGCATGAGCCAGAGAGACAAGGAAGGCTTTCAAAGGAAGGGATGGTCAAGCTGGGTTTCCAAGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464808.1
CDS GCA 72 bp CCGTCATTATCTCTGTATAGACCCAGTTGGCAATCATaGATTTGGGGCCCTCTGCTCCTATCACCACCGCAT +
Preference number: 6 (lower is better)
Translates to: PSLSLYRPSWQS*IWGPLLLSPPH
Trigger: ATGCGGTGGTGATAGGAGCAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAATGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462874.1
CDS GCA 72 bp AAGGCATGCCCTCAAAGCTGCATGTTGAGTGCCGTCTaGTTTCGGTCCCGTCATTATCTCTGTATAGACCCA +
Preference number: 6 (lower is better)
Translates to: KACPQSCMLSAV*FRSRHYLCIDP
Trigger: TGGGTCTATACAGAGATAATGACGGGACCGAAAGCAGACGGCACTCAACATGCAGCTTTGAGGGCATGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462874.1
ENST00000494941.1
CDS CCA 72 bp TGTGGGGACTTGTCATGGCTCCAATCACTGCATCTGTaGCTAGAGTGGCTTTTAAAGGCTCAGACTCGAACC +
Preference number: 6 (lower is better)
Translates to: CGDLSWLQSLHL*LEWLLKAQTRT
Trigger: GGTTCGAGTCTGAGCCTTTAAAAGCCACTCTAGCCACAGATGCAGTGATTGGAGCCATGACAAGTCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CCA 72 bp CTTTCGGTCCCGTCATTATCTCTGTATAGACCCAGTTaGCAATCATGCATTTGGGGCCCTCTGCTCCTATCA +
Preference number: 6 (lower is better)
Translates to: LSVPSLSLYRPS*QSCIWGPLLLS
Trigger: TGATAGGAGCAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAATGACGGGACCGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462874.1
CDS CCA 72 bp CTTTCGGTCCCGTCATTATCTCTGTATAGACCCAGTTaGCAATCATGCATTTGGGGCCCTCTAGTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: LSVPSLSLYRPS*QSCIWGPLVFL
Trigger: CAGGAAGACTAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAATGACGGGACCGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS GCA 72 bp GAAAATGAAGGCATGCCCTCAAAGCTGCATGTTGAGTaGCGTCTGCTTTCGGTCCCGTCATTATCTCTGTAT +
Preference number: 6 (lower is better)
Translates to: ENEGMPSKLHVE*RLLSVPSLSLY
Trigger: ATACAGAGATAATGACGGGACCGAAAGCAGACGGCACTCAACATGCAGCTTTGAGGGCATGCCTTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462874.1
ENST00000494941.1
CDS GCA 72 bp CTAGTACATATGAAAATGAAGGCATGCCCTCAAAGCTaGATGTTGAGTGCCGTCTGCTTTCGGTCCCGTCAT +
Preference number: 6 (lower is better)
Translates to: LVHMKMKACPQS*MLSAVCFRSRH
Trigger: ATGACGGGACCGAAAGCAGACGGCACTCAACATGCAGCTTTGAGGGCATGCCTTCATTTTCATATGTACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462874.1
ENST00000494941.1
CDS GCA 72 bp AGGTTTCTCACTCAGATGGGTCAAAGGAGACAGTGCTaGAATGTGGTGTGCCTCTTACCATTGATCTTGGTG +
Preference number: 6 (lower is better)
Translates to: RFLTQMGQRRQC*NVVCLLPLILV
Trigger: CACCAAGATCAATGGTAAGAGGCACACCACATTGCAGCACTGTCTCCTTTGACCCATCTGAGTGAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483923.5
CDS GCA 72 bp CCGTCATTATCTCTGTATAGACCCAGTTGGCAATCATaGATTTGGGGCCCTCTAGTCTTCCTGTCATTCTCC +
Preference number: 6 (lower is better)
Translates to: PSLSLYRPSWQS*IWGPLVFLSFS
Trigger: GGAGAATGACAGGAAGACTAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAATGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS CCA 72 bp TTGTCATGGCTCCAATCACTGCATCTGTGGCTAGAGTaGCTTTTAAAGGCTCAGACTCGAACCACTGATCCA +
Preference number: 6 (lower is better)
Translates to: LSWLQSLHLWLE*LLKAQTRTTDP
Trigger: TGGATCAGTGGTTCGAGTCTGAGCCTTTAAAAGCCACTCTAGCCACAGATGCAGTGATTGGAGCCATGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370575.5
ENST00000483923.5
CDS CAA 72 bp CATATGAAAATGAAGGCATGCCCTCAAAGCTGCATGTaGAGTGCCGTCTGCTTTCGGTCCCGTCATTATCTC +
Preference number: 6 (lower is better)
Translates to: HMKMKACPQSCM*SAVCFRSRHYL
Trigger: GAGATAATGACGGGACCGAAAGCAGACGGCACTCAACATGCAGCTTTGAGGGCATGCCTTCATTTTCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462874.1
ENST00000494941.1
CDS CAA 90 bp GCTCTAGTACATATGAAAATGAAGGCATGCCCTCAAAGCTGCATGTaGAGTGCCGTCTGCTTTCGGTCCCGTCATTATCTCTGTATAGAC +
Preference number: 6 (lower is better)
Translates to: ALVHMKMKACPQSCM*SAVCFRSRHYLCID
Trigger: GTCTATACAGAGATAATGACGGGACCGAAAGCAGACGGCACTCAACATGCAGCTTTGAGGGCATGCCTTCATTTTCATATGTACTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462874.1
ENST00000494941.1
CDS CCA 72 bp TTATCTCTGTATAGACCCAGTTGGCAATCATGCATTTaGGGCCCTCTAGTCTTCCTGTCATTCTCCATGGGA +
Preference number: 6 (lower is better)
Translates to: LSLYRPSWQSCI*GPLVFLSFSMG
Trigger: TCCCATGGAGAATGACAGGAAGACTAGAGGGCCCCAAATGCATGATTGCCAACTGGGTCTATACAGAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494941.1
CDS TCA 72 bp ACACACACATACATCACACATTTTTCCCTGGAGAGGTaGGTGTTGAGTATCTACCAGCTCGCAACTGCTCTA +
Preference number: 6 (lower is better)
Translates to: THTYITHFSLER*VLSIYQLATAL
Trigger: TAGAGCAGTTGCGAGCTGGTAGATACTCAACACTCACCTCTCCAGGGAAAAATGTGTGATGTATGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494941.1