RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PYGM (Homo sapiens)

Ensembl gene IDs: ENSG00000068976

Ensembl transcript IDs: ENST00000164139.4, ENST00000377432.7, ENST00000462303.1, ENST00000483742.1

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTaGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGG +
Preference number: 1 (lower is better)
Translates to: RRLPRRMNLLGSGCS*SDPINRRGPGARGR
Trigger: CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377432.7
3UTR-3UTR GCA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACACAGTACCCCACCCTCTaGATGAGGTGCTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTQYPTL*MRCWGW
Trigger: CCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTG...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR TCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGACCCCACCCTCTGCATaGGGTGCTGGGGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGTPPSA*GAGAGP
Trigger: TGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGT...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR CCA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGGACAGACTCAAGGGCTaGTTTGGGGTCTGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: GCSWSDPINRRGPGARGRDRLKG*FGVWSG
Trigger: TCCAGACCAGACCCCAAACCAGCCCTTGAGTCTGTC...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR CCA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGAGTCACGCTGGACACTaGGACATTGAGAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: GCSWSDPINRRGPGARGRSHAGH*DIESGE
Trigger: TTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR CCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGCTCTGCATGAGGTGCTaGGGCTGGCCCAAGAGAGTG +
Preference number: 2 (lower is better)
Translates to: SHAGHWDIESGENEGSRRLCMRC*GWPKRV
Trigger: CACTCTCTTGGGCCAGCCCCAGCACCTCATGCAGAG...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR GCA 90 bp GAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCAGTACCCCACCCTCTaGATGAGGTGCTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: EAPKENEFIREWVQLVRPQYPTL*MRCWGW
Trigger: CCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTG...GGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377432.7
3UTR-3UTR CCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGGACAGACTCAAGGGCTaGTTTGGGGTCTGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGDRLKG*FGVWSG
Trigger: TCCAGACCAGACCCCAAACCAGCCCTTGAGTCTGTC...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR TCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATACCCCACCCTCTGCATaGGGTGCTGGGGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINTPPSA*GAGAGP
Trigger: TGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGT...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR GCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAAACCCTCTGCATGAGGTaGTGGGGCTGGCCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: PKENEFIREWVQLVRPHKTLCMR*WGWPKR
Trigger: TCTCTTGGGCCAGCCCCAGCACCTCATGCAGAGGGT...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR TCA 90 bp AAGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGATGGCCCAAGAGAGTGTaGCAGACTCAAGGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: KEAPKENEFIREWVQLVRWPKRV*QTQGLV
Trigger: AACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCA...TCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
3UTR-3UTR CCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAAAGTCACGCTGGACACTaGGACATTGAGAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: PKENEFIREWVQLVRPHKSHAGH*DIESGE
Trigger: TTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR CAA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCTGGACACTGGGACATaGAGAGTGGGGAAAATGAGG +
Preference number: 3 (lower is better)
Translates to: LGSGCSWSDPINRRGPGALDTGT*RVGKMR
Trigger: CCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAG...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR CCA 72 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTaGTCAGACCCCATAAATAGGAGGGGACCGGGAGCC +
Preference number: 3 (lower is better)
Translates to: PRRMNLLGSGCS*SDPINRRGPGA
Trigger: GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
3UTR-3UTR CAA 90 bp GAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCTGGACACTGGGACATaGAGAGTGGGGAAAATGAGG +
Preference number: 3 (lower is better)
Translates to: EAPKENEFIREWVQLVRPLDTGT*RVGKMR
Trigger: CCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAG...GGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377432.7
3UTR GCA 72 bp AGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTaGAGTTGGTCAGACCCCATAAATAGGAGGGGACCG +
Preference number: 3 (lower is better)
Translates to: RLPRRMNLLGSG*SWSDPINRRGP
Trigger: CGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR TCA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGTGCGCGCCACGCCGTTaGCGGCGTGCGACCCCGCGA +
Preference number: 4 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLCAPRR*RRATPR
Trigger: TCGCGGGGTCGCACGCCGTCAACGGCGTGGCGCGCA...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp CTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCTGGTGGGCCGGGACATGGCTaGAGGAGGGCGGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: LGLAQESVTDSRAGLGSGGPGHG*RRAGRT
Trigger: AGTCCGGCCCGCCCTCCTGCAGCCATGTCCCGGCCC...ACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGTGCGCGCCACGCCGTTaGCGGCGTGCGACCCCGCGA +
Preference number: 4 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGCAPRR*RRATPR
Trigger: TCGCGGGGTCGCACGCCGTCAACGGCGTGGCGCGCA...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGCGATGCGCTCAGCAATaGCCTCTGCCAGCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLRCAQQ*PLPARG
Trigger: ACCCCGGGCTGGCAGAGGTCATTGCTGAGCGCATCG...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGTACGTCCCCTGGGAATaGGGCCGCCACCCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLYVPWE*GRHPVE
Trigger: CTCAACCGGGTGGCGGCCGCATTCCCAGGGGACGTA...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCTGGTACCCCACCCTCTGCATaGGGTGCTGGGGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGLAQESVTDSRAGLGSGTPPSA*GAGAGP
Trigger: TGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGT...ACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACAAGGCATCGAAGTTCGTaGGCACGGGATCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTRHRSS*ARDHGS
Trigger: GCTGCCGTGATCCCGTGCGCACGAACTTCGATGCCT...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp CTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCTGGTACGCCGTTGACGGCGTaGGACCCCGCGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: LGLAQESVTDSRAGLGSGTPLTA*DPAMHR
Trigger: CCTGTGCATCGCGGGGTCGCACGCCGTCAACGGCGT...ACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGGAGGCGGTCACCCACTaGCGGGTCATGGTTGACCAC +
Preference number: 4 (lower is better)
Translates to: GCSWSDPINRRGPGARGREAVTH*RVMVDH
Trigger: GTGGTCAACCATGACCCGGCAGTGGGTGACCGCCTC...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCCCGGTCTACGTCCCCTaGGAATGCGGCCGCCACCCG +
Preference number: 4 (lower is better)
Translates to: LRDLTPVPHPLHEVLGLAPVYVP*ECGRHP
Trigger: CGGGTGGCGGCCGCATTCCCAGGGGACGTAGACCGG...GGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGGATCTCGGAGTaGATGCGCGCCACGCCGTTG +
Preference number: 4 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTLRISE*MRATPL
Trigger: CAACGGCGTGGCGCGCATCCACTCCGAGATCCTCAA...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACACCCACTGCCGGGTCATaGTTGACCACATCCCCGATG +
Preference number: 4 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTPTAGS*LTTSPM
Trigger: CATCGGGGATGTGGTCAACCATGACCCGGCAGTGGG...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCTGGTCGATGCGCTCAGCAATaGCCTCTGCCAGCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LGLAQESVTDSRAGLGSGRCAQQ*PLPARG
Trigger: ACCCCGGGCTGGCAGAGGTCATTGCTGAGCGCATCG...ACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGGGTCCAGGTCAGAGATaGAGTCCTCCCCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: GCSWSDPINRRGPGARGRGPGQR*SPPRCA
Trigger: AGCGCATCGGGGAGGACTTCATCTCTGACCTGGACC...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGGGCCGGGACATGGCTaGAGGAGGGCGGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVGPGHG*RRAGRT
Trigger: AGTCCGGCCCGCCCTCCTGCAGCCATGTCCCGGCCC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCACGCCGTTGACGGCGTaGGACCCCGCGATGCACAGG +
Preference number: 4 (lower is better)
Translates to: LGSGCSWSDPINRRGPGATPLTA*DPAMHR
Trigger: CCTGTGCATCGCGGGGTCGCACGCCGTCAACGGCGT...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGACCCTCTGCATGAGGTaGTGGGGCTGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLTLCMR*WGWPKR
Trigger: TCTCTTGGGCCAGCCCCAGCACCTCATGCAGAGGGT...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACAACAGGTCGGGCTGTTTaGGGGAGAAGAAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTTGRAV*GRRSHC
Trigger: GCAGTGGCTTCTTCTCCCCCAAACAGCCCGACCTGT...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGGGGCTGGCAGGCGCTaGCGGGAAGGCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRGAGRR*REGSTP
Trigger: GGGTGTGGAGCCTTCCCGCCAGCGCCTGCCAGCCCC...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGGGGCTGGCAGGCGCTaGCGGGAAGGCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVGAGRR*REGSTP
Trigger: GGGTGTGGAGCCTTCCCGCCAGCGCCTGCCAGCCCC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGGGCTGGTTTGGGGTCTaGTCTGGAGGCTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLGWFGV*SGGSDG
Trigger: GCCATCTGAGCCTCCAGACCAGACCCCAAACCAGCC...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACAACTCAAGGGCTGGTTTaGGGTCTGGTCTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTTQGLV*GLVWRL
Trigger: GAGCCTCCAGACCAGACCCCAAACCAGCCCTTGAGT...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGCTCTGCATGAGGTGCTaGGGCTGGCCCAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLLCMRC*GWPKRV
Trigger: CACTCTCTTGGGCCAGCCCCAGCACCTCATGCAGAG...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTAGTGCACAGGTAGCGTaGACTCGGGCCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESSAQVA*TRAGPS
Trigger: AGAAGGCCCGGCCCGAGTTCACGCTACCTGTGCACT...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGACAGGTGTGCCATGTTaGTGCGCTTCACTGCGCCCT +
Preference number: 4 (lower is better)
Translates to: GCSWSDPINRRGPGARGRTGVPC*CASLRP
Trigger: AGGGCGCAGTGAAGCGCATCAACATGGCACACCTGT...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTCTGCCGGGTCATGGTTaGCCACATCCCCGATGGCTG +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESLPGHG*PHPRWL
Trigger: CAGCCATCGGGGATGTGGTCAACCATGACCCGGCAG...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCCAACCTCCACCAGCGACATaGGCCGCAGCCGGTCTACGT +
Preference number: 4 (lower is better)
Translates to: RDLTPVPHPLHEVLGLAQPPPAT*AAAGLR
Trigger: ACGTAGACCGGCTGCGGCGCATGTCGCTGGTGGAGG...TTGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGACCCTCTGCATGAGGTaGTGGGGCTGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGTLCMR*WGWPKR
Trigger: TCTCTTGGGCCAGCCCCAGCACCTCATGCAGAGGGT...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCCAAGAGGGCGGGCCGGACTaGACTGATGGTAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RDLTPVPHPLHEVLGLAQEGGPD*TDGRGD
Trigger: GTCCCCTCTACCATCAGTCCAGTCCGGCCCGCCCTC...TTGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGACAGGTCGGGCTGTTTaGGGGAGAAGAAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLTGRAV*GRRSHC
Trigger: GCAGTGGCTTCTTCTCCCCCAAACAGCCCGACCTGT...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGCATGTTGCCGGTGCCTaGGGCTTCAGTGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLHVAGA*GFSARS
Trigger: ACTGCGGGCACTGAAGCCTCAGGCACCGGCAACATG...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGACCCCACCCTCTGCATaGGGTGCTGGGGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVTPPSA*GAGAGP
Trigger: TGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGT...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGTCAAGAAAGCAGGCTaGCAGCCGGCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVVKKAG*QPAQAP
Trigger: GGGGGCCTGGGCCGGCTGGCAGCCTGCTTTCTTGAC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000164139.4
CDS-3UTR GCA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGCTCAGCAATGACCTCTaGCAGCCCGGGGTTACACAG +
Preference number: 4 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGLSNDL*QPGVTQ
Trigger: CTGTGTAACCCCGGGCTGGCAGAGGTCATTGCTGAG...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGGCCGAAGCTCAGGAATaGGATCGTAGTACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GCSWSDPINRRGPGARGRAEAQE*DRSTPG
Trigger: CCCAGGAGTACTACGATCGCATTCCTGAGCTTCGGC...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCTGGTCTCTGCATGAGGTGCTaGGGCTGGCCCAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGLAQESVTDSRAGLGSGLCMRC*GWPKRV
Trigger: CACTCTCTTGGGCCAGCCCCAGCACCTCATGCAGAG...ACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGCACTTTCTCGGCCAGTaGGACTCGGTAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGHFLGQ*DSVVLQ
Trigger: CTGGAGAACTACCGAGTCTCACTGGCCGAGAAAGTG...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGTACGTCCCCTGGGAATaGGGCCGCCACCCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVYVPWE*GRHPVE
Trigger: CTCAACCGGGTGGCGGCCGCATTCCCAGGGGACGTA...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGTTGATGCGCTTCACTaGGCCCTCCTCCACCAGCGA +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLVDALH*ALLHQR
Trigger: TCGCTGGTGGAGGAGGGCGCAGTGAAGCGCATCAAC...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCGTTGATGCGCTTCACTaGGCCCTCCTCCACCAGCGA +
Preference number: 4 (lower is better)
Translates to: LGSGCSWSDPINRRGPGAVDALH*ALLHQR
Trigger: TCGCTGGTGGAGGAGGGCGCAGTGAAGCGCATCAAC...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTCCCGCAGTGGAGATCTaGTCAGAGAGGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESPAVEI*SERSAA
Trigger: AGCTGCAGACCTCTCTGAGCAGATCTCCACTGCGGG...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGAGGGCGGGCCGGACTaGACTGATGGTAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVEGGPD*TDGRGD
Trigger: GTCCCCTCTACCATCAGTCCAGTCCGGCCCGCCCTC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGACTTGGCACCCTGGCTaGTGTGCTCCACATGGCCGT +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLTWHPG*CAPHGR
Trigger: ACGGCCATGTGGAGCACACCAGCCAGGGTGCCAAGT...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGTGTGTCCACCCACTTaGCACCCTGGCTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLVCPPT*HPGWCA
Trigger: AGCACACCAGCCAGGGTGCCAAGTGGGTGGACACAC...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCCGGTCTACGTCCCCTaGGAATGCGGCCGCCACCCG +
Preference number: 4 (lower is better)
Translates to: EAPKENEFIREWVQLVRPPVYVP*ECGRHP
Trigger: CGGGTGGCGGCCGCATTCCCAGGGGACGTAGACCGG...GGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CCA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCTTGAGGATCTCGGAGTaGATGCGCGCCACGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LGSGCSWSDPINRRGPGALRISE*MRATPL
Trigger: CAACGGCGTGGCGCGCATCCACTCCGAGATCCTCAA...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGAGAGAGGTCTGCAGCTaGGATCACTTTCTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGREVCS*DHFLGQ
Trigger: CTGGCCGAGAAAGTGATCCCAGCTGCAGACCTCTCT...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCATTGGCCCCGTCCATaGTGCCAATGGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGSGCSWSDPINRRGPGAHWPRP*CQWSEP
Trigger: GGGCTCTGACCATTGGCACCATGGACGGGGCCAATG...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTATCTCCCGGGCATACTaGGCAATGGTGCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESISRAY*AMVRSL
Trigger: CAGTGACCGCACCATTGCCCAGTATGCCCGGGAGAT...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGGTCTGGAGGCTCAGATaGCCTCATCCGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGVWRLR*PHPGLA
Trigger: TGCCAGCCCCGGATGAGGCCATCTGAGCCTCCAGAC...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGGACAGACTCAAGGGCTaGTTTGGGGTCTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGDRLKG*FGVWSG
Trigger: TCCAGACCAGACCCCAAACCAGCCCTTGAGTCTGTC...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTAAGCCACTGCTCAGCTaGTCAATGACCTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESKPLLS*SMTCRS
Trigger: GCTTCGGCAGGTCATTGAGCAGCTGAGCAGTGGCTT...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCTGGTCCGCGTCCACTCTCTTaGGTTCTTGTACAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LGLAQESVTDSRAGLGSGPRPLS*VLVQGA
Trigger: AGCGCCTTGTACAAGAACCCAAGAGAGTGGACGCGG...ACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCACTCAAGGGCTGGTTTaGGGTCTGGTCTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LRDLTPVPHPLHEVLGLATQGLV*GLVWRL
Trigger: GAGCCTCCAGACCAGACCCCAAACCAGCCCTTGAGT...GGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTGACAGACTCAAGGGCTaGTTTGGGGTCTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESDRLKG*FGVWSG
Trigger: TCCAGACCAGACCCCAAACCAGCCCTTGAGTCTGTC...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGTCTTTTCTCTTGGTCTaGCAGGGGCCGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGSFLLV*QGPGHG
Trigger: GCCATGTCCCGGCCCCTGTCAGACCAAGAGAAAAGA...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp AGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCCAATGCTCAGCTGCTCAATaGCCTGCCGAAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RDLTPVPHPLHEVLGLAQCSAAQ*PAEAQE
Trigger: TTCCTGAGCTTCGGCAGGTCATTGAGCAGCTGAGCA...TTGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCCTCCACCAGCGACATaGGCCGCAGCCGGTCTACGT +
Preference number: 4 (lower is better)
Translates to: EAPKENEFIREWVQLVRPPPPAT*AAAGLR
Trigger: ACGTAGACCGGCTGCGGCGCATGTCGCTGGTGGAGG...GGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR GCA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGCGATGCACAGGTGTaGCATGTTGATGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LGSGCSWSDPINRRGPGARDAQV*HVDALH
Trigger: GTGAAGCGCATCAACATGGCACACCTGTGCATCGCG...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCCAACGCGATGCACAGGTGTaGCATGTTGATGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RDLTPVPHPLHEVLGLAQRDAQV*HVDALH
Trigger: GTGAAGCGCATCAACATGGCACACCTGTGCATCGCG...TTGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGAGGCGGTCACCCACTaGCGGGTCATGGTTGACCAC +
Preference number: 4 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGEAVTH*RVMVDH
Trigger: GTGGTCAACCATGACCCGGCAGTGGGTGACCGCCTC...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCTGGTTGCTTTCTTTTCTCTTaGTCTGACAGGGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LGLAQESVTDSRAGLGSGCFLFS*SDRGRD
Trigger: GTCCCGGCCCCTGTCAGACCAAGAGAAAAGAAAGCA...ACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGTGTGTCCACCCACTTaGCACCCTGGCTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVVCPPT*HPGWCA
Trigger: AGCACACCAGCCAGGGTGCCAAGTGGGTGGACACAC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCCAAAGAGAGGTCTGCAGCTaGGATCACTTTCTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RDLTPVPHPLHEVLGLAQREVCS*DHFLGQ
Trigger: CTGGCCGAGAAAGTGATCCCAGCTGCAGACCTCTCT...TTGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCATTGGCCCCGTCCATaGTGCCAATGGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVHWPRP*CQWSEP
Trigger: GGGCTCTGACCATTGGCACCATGGACGGGGCCAATG...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTAGAGGCGCATGGTGTTaGCAACATTGTTGCGATAGC +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESRGAWC*QHCCDS
Trigger: GCTATCGCAACAATGTTGTCAACACCATGCGCCTCT...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGGTCCAGGTCAGAGATaGAGTCCTCCCCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGGPGQR*SPPRCA
Trigger: AGCGCATCGGGGAGGACTTCATCTCTGACCTGGACC...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGTGTCGTTTATATTCGTaGATCCGCTTCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: GCSWSDPINRRGPGARGRCRLYS*IRFTWM
Trigger: CATCCAGGTGAAGCGGATTCACGAATATAAACGACA...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGCACTTTCTCGGCCAGTaGGACTCGGTAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGHFLGQ*DSVVLQ
Trigger: CTGGAGAACTACCGAGTCTCACTGGCCGAGAAAGTG...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTCAGCAATGACCTCTaGCAGCCCGGGGTTACACAG +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVLSNDL*QPGVTQ
Trigger: CTGTGTAACCCCGGGCTGGCAGAGGTCATTGCTGAG...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGAAGCCACTGCTCAGCTaGTCAATGACCTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGKPLLS*SMTCRS
Trigger: GCTTCGGCAGGTCATTGAGCAGCTGAGCAGTGGCTT...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGTGCTTTCTTTTCTCTTaGTCTGACAGGGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLCFLFS*SDRGRD
Trigger: GTCCCGGCCCCTGTCAGACCAAGAGAAAAGAAAGCA...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAACCCACTTGGCACCCTaGCTGGTGTGCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGTHLAP*LVCSTW
Trigger: CCATGTGGAGCACACCAGCCAGGGTGCCAAGTGGGT...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGATGGCCAGGGAGGGGTaGGTGTCATTGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRMAREG*VSLSWM
Trigger: CATCCAGCTCAATGACACCCACCCCTCCCTGGCCAT...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGCAGCACCGTGTGGTTaGTGTAGGCACAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVAAPCG*CRHRSS
Trigger: TGAGGACCTGTGCCTACACCAACCACACGGTGCTGC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGGAGTTGGGGTTGATGTaGACTTTGTATTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLELGLM*TLYSLS
Trigger: AGAGAGGGAATACAAAGTCCACATCAACCCCAACTC...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCAGTCACGCTGGACACTaGGACATTGAGAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LRDLTPVPHPLHEVLGLASHAGH*DIESGE
Trigger: TTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT...GGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTCCCCGGAGATCTTCTTaGGGTCCTTCTCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESPRRSS*GPSHSS
Trigger: ACTACTATGAGAAGGACCCCAAGAAGATCTCCGGGG...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR TCA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGATCTTTTCTCTTGGTCTaGCAGGGGCCGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGSFLLV*QGPGHG
Trigger: GCCATGTCCCGGCCCCTGTCAGACCAAGAGAAAAGA...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCTGGTCCAGGCCACGCACACTaGTTTGCTTTCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGLAQESVTDSRAGLGSGPGHAH*FAFFSL
Trigger: AAGAGAAAAGAAAGCAAATCAGTGTGCGTGGCCTGG...ACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTTGGCCACATCCCGAATaGAAGCTTCATCATCCACAA +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESWPHPE*KLHHPQ
Trigger: TTGTGGATGATGAAGCTTTCATTCGGGATGTGGCCA...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGCCCGCATGCCAAAGATaGAGAAGTTTTCCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGPACQR*RSFPLP
Trigger: CGGGAGAGGAAAACTTCTTCATCTTTGGCATGCGGG...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGCAAAGGAGAGCAGTTTaGGCAGCTGGTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRQRRAV*AAGPGQ
Trigger: CTGACCTGGACCAGCTGCGCAAACTGCTCTCCTTTG...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGCCGAAGCTCAGGAATaGGATCGTAGTACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRAEAQE*DRSTPG
Trigger: CCCAGGAGTACTACGATCGCATTCCTGAGCTTCGGC...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCAGTACCCCACCCTCTaGATGAGGTGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRLPRRMNLLGSGCSWSDQYPTL*MRCWGW
Trigger: CCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTG...GTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGATGGCCACCTTATCTaGGAAGGCATCGAAGTTCGT +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLDGHLI*EGIEVR
Trigger: ACGAACTTCGATGCCTTCCCAGATAAGGTGGCCATC...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTTCAGTGCCCGCAGTaGAGATCTGCTCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVLQCPQ*RSAQRG
Trigger: ACCTCTCTGAGCAGATCTCCACTGCGGGCACTGAAG...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGTGGCCACATCCCGAATaGAAGCTTCATCATCCACAA +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLWPHPE*KLHHPQ
Trigger: TTGTGGATGATGAAGCTTTCATTCGGGATGTGGCCA...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCAGAGTGAGTTGGGGTTaGTGTGGACTTTGTATTCCC +
Preference number: 4 (lower is better)
Translates to: LGSGCSWSDPINRRGPGARVSWG*CGLCIP
Trigger: GGGAATACAAAGTCCACATCAACCCCAACTCACTCT...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGCTGGATGTCGAAGAGTaGGTTGGGGTTGATGTGGAC +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRLDVEE*VGVDVD
Trigger: GTCCACATCAACCCCAACTCACTCTTCGACATCCAG...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGATGGCCCAAGAGAGTGTaGCAGACTCAAGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGWPKRV*QTQGLV
Trigger: AACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCA...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGAGCTGCTCAATGACCTaGCGAAGCTCAGGAATGCGA +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRSCSMT*RSSGMR
Trigger: TCGCATTCCTGAGCTTCGGCAGGTCATTGAGCAGCT...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCTTATTAGGGAGTGGGTaGAGTTGGTCAGACCCCATA +
Preference number: 4 (lower is better)
Translates to: LGSGCSWSDPINRRGPGALLGSG*SWSDPI
Trigger: TATGGGGTCTGACCAACTGCACCCACTCCCTAATAA...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGGCCCAGTGTTGCCATaGAGTCAAGAAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGGPVLP*SQESRL
Trigger: CAGCCTGCTTTCTTGACTCCATGGCAACACTGGGCC...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000164139.4
CDS-3UTR CCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTGCATTGTACCCTCTTTaGTCAAGCTTATCCACATCC +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESALYPL*SSLSTS
Trigger: GGATGTGGATAAGCTTGACCAAAGAGGGTACAATGC...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGAATTTATTAGGGAGTaGGTGCAGTTGGTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLEFIRE*VQLVRP
Trigger: GGGTCTGACCAACTGCACCCACTCCCTAATAAATTC...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGAGAGGCGCATGGTGTTaGCAACATTGTTGCGATAGC +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVRGAWC*QHCCDS
Trigger: GCTATCGCAACAATGTTGTCAACACCATGCGCCTCT...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGTTATTAGGGAGTGGGTaGAGTTGGTCAGACCCCATA +
Preference number: 4 (lower is better)
Translates to: VTLDTGTLRVGKMRVPGGLLGSG*SWSDPI
Trigger: TATGGGGTCTGACCAACTGCACCCACTCCCTAATAA...CCCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AAGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGAACTTGGCACCCTGGCTaGTGTGCTCCACATGGCCGT +
Preference number: 4 (lower is better)
Translates to: KEAPKENEFIREWVQLVRTWHPG*CAPHGR
Trigger: ACGGCCATGTGGAGCACACCAGCCAGGGTGCCAAGT...TCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGATGGCCACCTTATCTaGGAAGGCATCGAAGTTCGT +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVDGHLI*EGIEVR
Trigger: ACGAACTTCGATGCCTTCCCAGATAAGGTGGCCATC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACATGGCCAGGGAGGGGTaGGTGTCATTGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RRLPRRMNLLGSGCSWSDMAREG*VSLSWM
Trigger: CATCCAGCTCAATGACACCCACCCCTCCCTGGCCAT...GTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CCA 90 bp AGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACGCAGCACCGTGTGGTTaGTGTAGGCACAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RRLPRRMNLLGSGCSWSDAAPCG*CRHRSS
Trigger: TGAGGACCTGTGCCTACACCAACCACACGGTGCTGC...GTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CCA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGACTTTAAACCGGTCATaGTGCATGAGCATATTGACA +
Preference number: 4 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGTLNRS*CMSILT
Trigger: TGTCAATATGCTCATGCACCATGACCGGTTTAAAGT...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGAGAACTTGCCAGAGGTaGCTATGTTCCGGATCACCA +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRRTCQR*LCSGSP
Trigger: TGGTGATCCGGAACATAGCCACCTCTGGCAAGTTCT...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAAGTCTGGAGGCTCAGATaGCCTCATCCGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKVWRLR*PHPGLA
Trigger: TGCCAGCCCCGGATGAGGCCATCTGAGCCTCCAGAC...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AAGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGAGGCTGGTTTGGGGTCTaGTCTGGAGGCTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: KEAPKENEFIREWVQLVRGWFGV*SGGSDG
Trigger: GCCATCTGAGCCTCCAGACCAGACCCCAAACCAGCC...TCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CCA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGGGAGTGGGTGCAGTTaGTCAGACCCCATAAATAGG +
Preference number: 4 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGGSGCS*SDPINR
Trigger: CCTATTTATGGGGTCTGACCAACTGCACCCACTCCC...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATCATGTTGCCGGTGCCTaGGGCTTCAGTGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINHVAGA*GFSARS
Trigger: ACTGCGGGCACTGAAGCCTCAGGCACCGGCAACATG...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCCAAAGTGTGAAATGCAGGTaGCGGTTGAAGTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RDLTPVPHPLHEVLGLAQSVKCR*RLKFFF
Trigger: GAAAAAGAACTTCAACCGGCACCTGCATTTCACACT...TTGGGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AAGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCGCAGTGGAGATCTaGTCAGAGAGGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KEAPKENEFIREWVQLVRPAVEI*SERSAA
Trigger: AGCTGCAGACCTCTCTGAGCAGATCTCCACTGCGGG...TCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR GCA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTTTAAACCGGTCATGGTaGATGAGCATATTGACAATG +
Preference number: 4 (lower is better)
Translates to: GRKGARVLSHAGHWDIESLNRSW*MSILTM
Trigger: CATTGTCAATATGCTCATGCACCATGACCGGTTTAA...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAACCCACTGCCGGGTCATaGTTGACCACATCCCCGATG +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKPTAGS*LTTSPM
Trigger: CATCGGGGATGTGGTCAACCATGACCCGGCAGTGGG...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGAATTTATTAGGGAGTaGGTGCAGTTGGTCAGACCC +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRREFIRE*VQLVRP
Trigger: GGGTCTGACCAACTGCACCCACTCCCTAATAAATTC...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAAACAGGTGTGCCATGTTaGTGCGCTTCACTGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKTGVPC*CASLRP
Trigger: AGGGCGCAGTGAAGCGCATCAACATGGCACACCTGT...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AAGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACAAAGGAGAGCAGTTTaGGCAGCTGGTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KEAPKENEFIREWVQLVRQRRAV*AAGPGQ
Trigger: CTGACCTGGACCAGCTGCGCAAACTGCTCTCCTTTG...TCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR GCA 90 bp AGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCATGTGGTACCCAGGTaGAGCCTTCCCTCCAATCAT +
Preference number: 4 (lower is better)
Translates to: RRLPRRMNLLGSGCSWSDHVVPR*SLPSNH
Trigger: ATGATTGGAGGGAAGGCTGCACCTGGGTACCACATG...GTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR GCA 90 bp CTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCGTAGTCTTCATAATCTaGGAAGACTTTAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: LRDLTPVPHPLHEVLGLAVVFII*EDFKPV
Trigger: GACCGGTTTAAAGTCTTCGCAGATTATGAAGACTAC...GGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGTAGTCTTCATAATCTaGGAAGACTTTAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLVVFII*EDFKPV
Trigger: GACCGGTTTAAAGTCTTCGCAGATTATGAAGACTAC...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGGTAGTAGATCCTCTTaGGGTCCTTCTCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRGSRSS*GPSHSS
Trigger: ACTACTATGAGAAGGACCCCAAGAGGATCTACTACC...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000164139.4
CDS-3UTR CCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATACCCACTTGGCACCCTaGCTGGTGTGCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINTHLAP*LVCSTW
Trigger: CCATGTGGAGCACACCAGCCAGGGTGCCAAGTGGGT...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGAGTTGGGGTTGATGTaGACTTTGTATTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRELGLM*TLYSLS
Trigger: AGAGAGGGAATACAAAGTCCACATCAACCCCAACTC...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCCACTTTAAACCGGTCATaGTGCATGAGCATATTGACA +
Preference number: 4 (lower is better)
Translates to: LRDLTPVPHPLHEVLGLATLNRS*CMSILT
Trigger: TGTCAATATGCTCATGCACCATGACCGGTTTAAAGT...GGCCAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGATGTCGTTTATATTCGTaGATCCGCTTCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGCRLYS*IRFTWM
Trigger: CATCCAGGTGAAGCGGATTCACGAATATAAACGACA...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp AAGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCGCATGCCAAAGATaGAGAAGTTTTCCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: KEAPKENEFIREWVQLVRPACQR*RSFPLP
Trigger: CGGGAGAGGAAAACTTCTTCATCTTTGGCATGCGGG...TCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR TCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATGGCCCAAGAGAGTGTaGCAGACTCAAGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKWPKRV*QTQGLV
Trigger: AACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCA...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGCGAAGAAATTATCATTaGGGTACAGGACACGAGAGA +
Preference number: 4 (lower is better)
Translates to: SHAGHWDIESGENEGSRRRRNYH*GTGHER
Trigger: TCTCTCGTGTCCTGTACCCCAATGATAATTTCTTCG...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAACCGCGTCCACTCTCTTaGGTTCTTGTACAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKPRPLS*VLVQGA
Trigger: AGCGCCTTGTACAAGAACCCAAGAGAGTGGACGCGG...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATTGCTCAGCTGCTCAATaGCCTGCCGAAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINCSAAQ*PAEAQE
Trigger: TTCCTGAGCTTCGGCAGGTCATTGAGCAGCTGAGCA...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAACATGTGGTACCCAGGTaGAGCCTTCCCTCCAATCAT +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKHVVPR*SLPSNH
Trigger: ATGATTGGAGGGAAGGCTGCACCTGGGTACCACATG...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGTTAAACCGGTCATGGTaGATGAGCATATTGACAATG +
Preference number: 4 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVLNRSW*MSILTM
Trigger: CATTGTCAATATGCTCATGCACCATGACCGGTTTAA...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATCTTCAGTGCCCGCAGTaGAGATCTGCTCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINLQCPQ*RSAQRG
Trigger: ACCTCTCTGAGCAGATCTCCACTGCGGGCACTGAAG...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAAGGGAGTGGGTGCAGTTaGTCAGACCCCATAAATAGG +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKGSGCS*SDPINR
Trigger: CCTATTTATGGGGTCTGACCAACTGCACCCACTCCC...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATCTGGATGTCGAAGAGTaGGTTGGGGTTGATGTGGAC +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINLDVEE*VGVDVD
Trigger: GTCCACATCAACCCCAACTCACTCTTCGACATCCAG...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGCTGCTCAATGACCTaGCGAAGCTCAGGAATGCGA +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINSCSMT*RSSGMR
Trigger: TCGCATTCCTGAGCTTCGGCAGGTCATTGAGCAGCT...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAAAGAGTGAGTTGGGGTTaGTGTGGACTTTGTATTCCC +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKRVSWG*CGLCIP
Trigger: GGGAATACAAAGTCCACATCAACCCCAACTCACTCT...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp AGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACAGTGTGAAATGCAGGTaGCGGTTGAAGTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RRLPRRMNLLGSGCSWSDSVKCR*RLKFFF
Trigger: GAAAAAGAACTTCAACCGGCACCTGCATTTCACACT...GTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGAACTTGCCAGAGGTaGCTATGTTCCGGATCACCA +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINRTCQR*LCSGSP
Trigger: TGGTGATCCGGAACATAGCCACCTCTGGCAAGTTCT...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR TCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATCCAGGCCACGCACACTaGTTTGCTTTCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINPGHAH*FAFFSL
Trigger: AAGAGAAAAGAAAGCAAATCAGTGTGCGTGGCCTGG...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR GCA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATTTTACGAGTGTGAAATaGAGGTGCCGGTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINFTSVK*RCRLKF
Trigger: GAACTTCAACCGGCACCTGCATTTCACACTCGTAAA...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CCA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAACGAAGAAATTATCATTaGGGTACAGGACACGAGAGA +
Preference number: 4 (lower is better)
Translates to: PKENEFIREWVQLVRPHKRRNYH*GTGHER
Trigger: TCTCTCGTGTCCTGTACCCCAATGATAATTTCTTCG...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CCA 90 bp GCCCTCCTCCACCAGCGACATGCGCCGCAGCCGGTCTACGTCCCCTaGGAATGCGGCCGCCACCCGGTTGAGGAAGCGCTGGTTGATCTC +
Preference number: 5 (lower is better)
Translates to: ALLHQRHAPQPVYVP*ECGRHPVEEALVDL
Trigger: GAGATCAACCAGCGCTTCCTCAACCGGGTGGCGGCCGCATTCCCAGGGGACGTAGACCGGCTGCGGCGCATGTCGCTGGTGGAGGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS GCA 90 bp GCGCGCCACGCCGTTGACGGCGTGCGACCCCGCGATGCACAGGTGTaGCATGTTGATGCGCTTCACTGCGCCCTCCTCCACCAGCGACAT +
Preference number: 5 (lower is better)
Translates to: ARHAVDGVRPRDAQV*HVDALHCALLHQRH
Trigger: ATGTCGCTGGTGGAGGAGGGCGCAGTGAAGCGCATCAACATGGCACACCTGTGCATCGCGGGGTCGCACGCCGTCAACGGCGTGGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGATGCGCGCCACGCCGTaGACGGCGTGCGACCCCGCG +
Preference number: 5 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLMRATP*TACDPA
Trigger: CGCGGGGTCGCACGCCGTCAACGGCGTGGCGCGCAT...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACACGGCCAGGCCCAGTGTaGCCATGGAGTCAAGAAAGC +
Preference number: 5 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTRPGPV*PWSQES
Trigger: GCTTTCTTGACTCCATGGCAACACTGGGCCTGGCCG...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000164139.4
CDS-3UTR CAA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATCCGCGTCCACTCTCTaGGGTTCTTGTACAAGGCGC +
Preference number: 5 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTSASTL*GSCTRR
Trigger: GCGCCTTGTACAAGAACCCAAGAGAGTGGACGCGGA...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTTGTGTGTCCACCCACTaGGCACCCTGGCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: GRKGARVLSHAGHWDIESCVSTH*APWLVC
Trigger: GCACACCAGCCAGGGTGCCAAGTGGGTGGACACACA...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGCGGCCGCCACCCGGTaGAGGAAGCGCTGGTTGATC +
Preference number: 5 (lower is better)
Translates to: SHAGHWDIESGENEGSRRAAATR*RKRWLI
Trigger: GATCAACCAGCGCTTCCTCAACCGGGTGGCGGCCGC...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTATTGGGCTCCCTCTaGATGCGGTTGTACAGGGTG +
Preference number: 5 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTLLGSL*MRLYRV
Trigger: CACCCTGTACAACCGCATCAAGAGGGAGCCCAATAA...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGTGGGGTGGCCACATaGCGGTCCTTTACGAGTGTG +
Preference number: 5 (lower is better)
Translates to: LGSGCSWSDPINRRGPGARGVAT*RSFTSV
Trigger: CACACTCGTAAAGGACCGCAATGTGGCCACCCCACG...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS TCA 90 bp CACTGTCTCCATCCTGCAGCCAGAGGGTTCTTCCAGGCCTCGTTCTaGGCATGCGGGACCATGCTCACAACATCTCACAGCTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: HCLHPAARGFFQASF*ACGTMLTTSHSSLL
Trigger: CAGGAGGGAGCTGTGAGATGTTGTGAGCATGGTCCCGCATGCTCAGAACGAGGCCTGGAAGAACCCTCTGGCTGCAGGATGGAGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS-3UTR CAA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGTGTGTGTCCACCCACTaGGCACCCTGGCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVCVSTH*APWLVC
Trigger: GCACACCAGCCAGGGTGCCAAGTGGGTGGACACACA...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAAATGCGCGCCACGCCGTaGACGGCGTGCGACCCCGCG +
Preference number: 5 (lower is better)
Translates to: PKENEFIREWVQLVRPHKMRATP*TACDPA
Trigger: CGCGGGGTCGCACGCCGTCAACGGCGTGGCGCGCAT...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTCCCTCTTGATGCGGTaGTACAGGGTGATGACATGG +
Preference number: 5 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGSLLMR*YRVMTW
Trigger: CCATGTCATCACCCTGTACAACCGCATCAAGAGGGA...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGCACTCTCTTGGGTTCTaGTACAAGGCGCTGACTTTC +
Preference number: 5 (lower is better)
Translates to: GCSWSDPINRRGPGARGRHSLGF*YKALTF
Trigger: GAAAGTCAGCGCCTTGTACAAGAACCCAAGAGAGTG...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGCCGACATTGAAGTCCTaGAGGTTGAAGTCATTGGGA +
Preference number: 5 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLPTLKS*RLKSLG
Trigger: TCCCAATGACTTCAACCTCAAGGACTTCAATGTCGG...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGTCACATCCCACGCCTaGTCCCAGTCCATCCGTTCC +
Preference number: 5 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVVTSHA*SQSIRS
Trigger: GGAACGGATGGACTGGGACAAGGCGTGGGATGTGAC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGGTCACATCCCACGCCTaGTCCCAGTCCATCCGTTCC +
Preference number: 5 (lower is better)
Translates to: SHAGHWDIESGENEGSRRVTSHA*SQSIRS
Trigger: GGAACGGATGGACTGGGACAAGGCGTGGGATGTGAC...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCACAAAGGAGAGCAGTTaGCGCAGCTGGTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LGSGCSWSDPINRRGPGATKESS*RSWSRS
Trigger: TGACCTGGACCAGCTGCGCAAACTGCTCTCCTTTGT...GGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GAGCCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTTTCCTGCTTCACTTaGGCCACATCCCGAATGAAA +
Preference number: 5 (lower is better)
Translates to: EPEDGRGPVSLVTLDTGTFSCFT*ATSRMK
Trigger: TTTCATTCGGGATGTGGCCAAAGTGAAGCAGGAAAA...TGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGCCCGAGGACGGGGCATTGTACCCTCTTaGGTCAAGCTTATCCACATC +
Preference number: 5 (lower is better)
Translates to: GCSWSDPINRRGPGARGRGIVPS*VKLIHI
Trigger: GATGTGGATAAGCTTGACCAAAGAGGGTACAATGCC...CCGTCCTCGGGCTCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGACACAGGTGTGCCATGTaGATGCGCTTCACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGHRCAM*MRFTAP
Trigger: GGGCGCAGTGAAGCGCATCAACATGGCACACCTGTG...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAAGAGTGAGTTGGGGTaGATGTGGACTTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLKSELG*MWTLYS
Trigger: GGAATACAAAGTCCACATCAACCCCAACTCACTCTT...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGATGTCGAAGAGTGAGTaGGGGTTGATGTGGACTTTG +
Preference number: 5 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGMSKSE*GLMWTL
Trigger: CAAAGTCCACATCAACCCCAACTCACTCTTCGACAT...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAACTGCCGGGTCATGGTaGACCACATCCCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGTAGSW*TTSPMA
Trigger: AGCCATCGGGGATGTGGTCAACCATGACCCGGCAGT...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCCGAGGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGATATTGACAATGTCCTaGAACAGGTCGGGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: PEDGRGPVSLVTLDTGTLILTMS*NRSGCL
Trigger: CAAACAGCCCGACCTGTTCAAGGACATTGTCAATAT...CAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAGACTCAAGGGCTGGTTaGGGGTCTGGTCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGDSRAG*GSGLEA
Trigger: AGCCTCCAGACCAGACCCCAAACCAGCCCTTGAGTC...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGCTGGACACTGGGACATaGAGAGTGGGGAAAATGAGG +
Preference number: 5 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLLDTGT*RVGKMR
Trigger: CCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAG...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CCA 90 bp CATGCGGGACCATGCTCACAACATCTCACAGCTCCCTCCTGCCCATaGGACAGCCAGCTTTCTAGTGAAGCCTCACAGGAGACACTTCTT +
Preference number: 5 (lower is better)
Translates to: HAGPCSQHLTAPSCP*DSQLSSEASQETLL
Trigger: AAGAAGTGTCTCCTGTGAGGCTTCACTAGAAAGCTGGCTGTCCCATGGGCAGGAGGGAGCTGTGAGATGTTGTGAGCATGGTCCCGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS-3UTR CAA 90 bp GAGGTGCTGGGGCTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTTGGGGTTTTCCTGCTTCACTTaGGCCACATCCCGAATGAAA +
Preference number: 5 (lower is better)
Translates to: EVLGLAQESVTDSRAGLGFSCFT*ATSRMK
Trigger: TTTCATTCGGGATGTGGCCAAAGTGAAGCAGGAAAA...CCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAGCCCCAGCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS GCA 90 bp TTCCAACCAGAAACCAGCGCTCCCCACAAAATCTCTAATCCCTCGTaGGACTCTCTAGTCCCTTGTGCGACTCTCAGGCAACTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: FQPETSAPHKISNPS*DSLVPCATLRQLSL
Trigger: CAGGGAGAGTTGCCTGAGAGTCGCACAAGGGACTAGAGAGTCGCACGAGGGATTAGAGATTTTGTGGGGAGCGCTGGTTTCTGGTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS-3UTR CAA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATGCGGCCGCCACCCGGTaGAGGAAGCGCTGGTTGATC +
Preference number: 5 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINAAATR*RKRWLI
Trigger: GATCAACCAGCGCTTCCTCAACCGGGTGGCGGCCGC...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGAACAAAGGAGAGCAGTTaGCGCAGCTGGTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGTKESS*RSWSRS
Trigger: TGACCTGGACCAGCTGCGCAAACTGCTCTCCTTTGT...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GGACGGAAGGGGGCCCGTGTCCTTAGTCACGCTGGACACTGGGACATTGAGAGTATGACATGGAGGCAGTaGAGGAGCTGTCGTTTATAT +
Preference number: 5 (lower is better)
Translates to: GRKGARVLSHAGHWDIESMTWRQ*RSCRLY
Trigger: ATATAAACGACAGCTCCTCAACTGCCTCCATGTCAT...ACTCTCAATGTCCCAGTGTCCAGCGTGACTAAGGACACGGGCCCCCTTCCGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGTCCCTCTTGATGCGGTaGTACAGGGTGATGACATGG +
Preference number: 5 (lower is better)
Translates to: SHAGHWDIESGENEGSRRSLLMR*YRVMTW
Trigger: CCATGTCATCACCCTGTACAACCGCATCAAGAGGGA...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGTTATTGGGCTCCCTCTaGATGCGGTTGTACAGGGTG +
Preference number: 5 (lower is better)
Translates to: SHAGHWDIESGENEGSRRLLGSL*MRLYRV
Trigger: CACCCTGTACAACCGCATCAAGAGGGAGCCCAATAA...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCTCCGCGTCCACTCTCTaGGGTTCTTGTACAAGGCGC +
Preference number: 5 (lower is better)
Translates to: EAPKENEFIREWVQLVRPSASTL*GSCTRR
Trigger: GCGCCTTGTACAAGAACCCAAGAGAGTGGACGCGGA...GGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CAA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGCTGGACACTGGGACATaGAGAGTGGGGAAAATGAGG +
Preference number: 5 (lower is better)
Translates to: SHAGHWDIESGENEGSRRLDTGT*RVGKMR
Trigger: CCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAG...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CCA 90 bp CGAATGAAAGCTTCATCATCCACAAAGGAGAGCAGTTTGCGCAGCTaGTCCAGGTCAGAGATGAAGTCCTCCCCGATGCGCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: RMKASSSTKESSLRS*SRSEMKSSPMRSAM
Trigger: CATTGCTGAGCGCATCGGGGAGGACTTCATCTCTGACCTGGACCAGCTGCGCAAACTGCTCTCCTTTGTGGATGATGAAGCTTTCATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CCA 90 bp CCCACACGCCACTGCTGTCTCTTAACCAGTTTGTTTGCTCCAAAATaGCTTTTCTCCTCCAGTAGCCCAAGTCCATATCCGGCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: PTRHCCLLTSLFAPK*LFSSSSPSPYPALP
Trigger: GGGCAAGGCCGGATATGGACTTGGGCTACTGGAGGAGAAAAGCCATTTTGGAGCAAACAAACTGGTTAAGAGACAGCAGTGGCGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS-3UTR CAA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGCCGACATTGAAGTCCTaGAGGTTGAAGTCATTGGGA +
Preference number: 5 (lower is better)
Translates to: SHAGHWDIESGENEGSRRPTLKS*RLKSLG
Trigger: TCCCAATGACTTCAACCTCAAGGACTTCAATGTCGG...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGTTGAAGATGGTCTTCTaGAGGATCTCGGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: SHAGHWDIESGENEGSRRLKMVF*RISEWM
Trigger: CATCCACTCCGAGATCCTCAAGAAGACCATCTTCAA...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGCTGGGGCTGGCAGCAAACTTCAACTaGTTTTCCTGCTTCACTTTG +
Preference number: 5 (lower is better)
Translates to: GLRDLTPVPHPLHEVLGLAANFN*FSCFTL
Trigger: CAAAGTGAAGCAGGAAAACAAGTTGAAGTTTGCTGC...CAGCCCCAGCACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAAGACTCAAGGGCTGGTTaGGGGTCTGGTCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PKENEFIREWVQLVRPHKDSRAG*GSGLEA
Trigger: AGCCTCCAGACCAGACCCCAAACCAGCCCTTGAGTC...TTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATCGTGGGGTGGCCACATaGCGGTCCTTTACGAGTGTG +
Preference number: 5 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINRGVAT*RSFTSV
Trigger: CACACTCGTAAAGGACCGCAATGTGGCCACCCCACG...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp AGTCACGCTGGACACTGGGACATTGAGAGTGGGGAAAATGAGGGTTCCAGGAGGAAGAGTGAGTTGGGGTaGATGTGGACTTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: SHAGHWDIESGENEGSRRKSELG*MWTLYS
Trigger: GGAATACAAAGTCCACATCAACCCCAACTCACTCTT...CCTCCTGGAACCCTCATTTTCCCCACTCTCAATGTCCCAGTGTCCAGCGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATACTGCCGGGTCATGGTaGACCACATCCCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINTAGSW*TTSPMA
Trigger: AGCCATCGGGGATGTGGTCAACCATGACCCGGCAGT...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGATATTGACAATGTCCTaGAACAGGTCGGGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVILTMS*NRSGCL
Trigger: CAAACAGCCCGACCTGTTCAAGGACATTGTCAATAT...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp TTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATAGGAGGGGACCGGGATCGAAGAAATTATCATaGGGGTACAGGACACGAGAG +
Preference number: 5 (lower is better)
Translates to: LLGSGCSWSDPINRRGPGSKKLS*GYRTRE
Trigger: CTCTCGTGTCCTGTACCCCAATGATAATTTCTTCGA...TCCCGGTCCCCTCCTATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp GAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCTTGAAGATGGTCTTCTaGAGGATCTCGGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: EAPKENEFIREWVQLVRPLKMVF*RISEWM
Trigger: CATCCACTCCGAGATCCTCAAGAAGACCATCTTCAA...GGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS-3UTR CAA 90 bp TTCCAGGAGGGGCTTAGAGATCTAACTCCAGTACCCCACCCTCTGCATGAGGTGGCAGCAAACTTCAACTaGTTTTCCTGCTTCACTTTG +
Preference number: 5 (lower is better)
Translates to: FQEGLRDLTPVPHPLHEVAANFN*FSCFTL
Trigger: CAAAGTGAAGCAGGAAAACAAGTTGAAGTTTGCTGC...CACCTCATGCAGAGGGTGGGGTACTGGAGTTAGATCTCTAAGCCCCTCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp AAGGAGGCTCCCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACACTCTCTTGGGTTCTaGTACAAGGCGCTGACTTTC +
Preference number: 5 (lower is better)
Translates to: KEAPKENEFIREWVQLVRHSLGF*YKALTF
Trigger: GAAAGTCAGCGCCTTGTACAAGAACCCAAGAGAGTG...TCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGGGAGCCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377432.7
CDS TCA 90 bp CAAACTTCAACTTGTTTTCCTGCTTCACTTTGGCCACATCCCGAATaGAAGCTTCATCATCCACAAAGGAGAGCAGTTTGCGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: QTSTCFPASLWPHPE*KLHHPQRRAVCAAG
Trigger: ACCAGCTGCGCAAACTGCTCTCCTTTGTGGATGATGAAGCTTTCATTCGGGATGTGGCCAAAGTGAAGCAGGAAAACAAGTTGAAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATATGTCGAAGAGTGAGTaGGGGTTGATGTGGACTTTG +
Preference number: 5 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINMSKSE*GLMWTL
Trigger: CAAAGTCCACATCAACCCCAACTCACTCTTCGACAT...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATTCGAAGAAATTATCATaGGGGTACAGGACACGAGAG +
Preference number: 5 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINSKKLS*GYRTRE
Trigger: CTCTCGTGTCCTGTACCCCAATGATAATTTCTTCGA...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS-3UTR CAA 90 bp CCAAGGAGAATGAATTTATTAGGGAGTGGGTGCAGTTGGTCAGACCCCATAAATATGACATGGAGGCAGTaGAGGAGCTGTCGTTTATAT +
Preference number: 5 (lower is better)
Translates to: PRRMNLLGSGCSWSDPINMTWRQ*RSCRLY
Trigger: ATATAAACGACAGCTCCTCAACTGCCTCCATGTCAT...ATTTATGGGGTCTGACCAACTGCACCCACTCCCTAATAAATTCATTCTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CAA 90 bp ACGCCGTTGACGGCGTGCGACCCCGCGATGCACAGGTGTGCCATGTaGATGCGCTTCACTGCGCCCTCCTCCACCAGCGACATGCGCCGC +
Preference number: 6 (lower is better)
Translates to: TPLTACDPAMHRCAM*MRFTAPSSTSDMRR
Trigger: GCGGCGCATGTCGCTGGTGGAGGAGGGCGCAGTGAAGCGCATCAACATGGCACACCTGTGCATCGCGGGGTCGCACGCCGTCAACGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS GCA 72 bp CGACATGCGCCGCAGCCGGTCTACGTCCCCTGGGAATaGGGCCGCCACCCGGTTGAGGAAGCGCTGGTTGAT +
Preference number: 6 (lower is better)
Translates to: RHAPQPVYVPWE*GRHPVEEALVD
Trigger: ATCAACCAGCGCTTCCTCAACCGGGTGGCGGCCGCATTCCCAGGGGACGTAGACCGGCTGCGGCGCATGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CCA 72 bp GTCTGGTCTGGAGGCTCAGATGGCCTCATCCGGGGCTaGCAGGCGCTGGCGGGAAGGCTCCACACCCCAGAT +
Preference number: 6 (lower is better)
Translates to: VWSGGSDGLIRG*QALAGRLHTPD
Trigger: ATCTGGGGTGTGGAGCCTTCCCGCCAGCGCCTGCCAGCCCCGGATGAGGCCATCTGAGCCTCCAGACCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164139.4
ENST00000377432.7
ENST00000483742.1
CDS TCA 72 bp CGGCGTGCGACCCCGCGATGCACAGGTGTGCCATGTTaGTGCGCTTCACTGCGCCCTCCTCCACCAGCGACA +
Preference number: 6 (lower is better)
Translates to: RRATPRCTGVPC*CASLRPPPPAT
Trigger: TGTCGCTGGTGGAGGAGGGCGCAGTGAAGCGCATCAACATGGCACACCTGTGCATCGCGGGGTCGCACGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS GCA 72 bp GCCGTTGACGGCGTGCGACCCCGCGATGCACAGGTGTaGCATGTTGATGCGCTTCACTGCGCCCTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: AVDGVRPRDAQV*HVDALHCALLH
Trigger: GTGGAGGAGGGCGCAGTGAAGCGCATCAACATGGCACACCTGTGCATCGCGGGGTCGCACGCCGTCAACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CAA 72 bp TTCTTGAGGATCTCGGAGTGGATGCGCGCCACGCCGTaGACGGCGTGCGACCCCGCGATGCACAGGTGTGCC +
Preference number: 6 (lower is better)
Translates to: FLRISEWMRATP*TACDPAMHRCA
Trigger: GGCACACCTGTGCATCGCGGGGTCGCACGCCGTCAACGGCGTGGCGCGCATCCACTCCGAGATCCTCAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS GCA 72 bp GATGAAGTCCTCCCCGATGCGCTCAGCAATGACCTCTaGCAGCCCGGGGTTACACAGAACCAGCCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: DEVLPDALSNDL*QPGVTQNQPAP
Trigger: CGGCGCTGGCTGGTTCTGTGTAACCCCGGGCTGGCAGAGGTCATTGCTGAGCGCATCGGGGAGGACTTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CCA 72 bp CCCTTGTGCGACTCTCAGGCAACTCTCCCTGCATTATaGTGTCAGCCCCCACAGTGGTCCCCCACCTGCCCC +
Preference number: 6 (lower is better)
Translates to: PLCDSQATLPAL*CQPPQWSPTCP
Trigger: GGGGCAGGTGGGGGACCACTGTGGGGGCTGACACCATAATGCAGGGAGAGTTGCCTGAGAGTCGCACAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS CAA 90 bp CAAACTCATAGCGAATCCCGTAGCCATAGGCGGCCAGGCCCAGTGTaGCCATGGAGTCAAGAAAGCAGGCTGCCAGCCGGCCCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: QTHSESRSHRRPGPV*PWSQESRLPAGPGP
Trigger: GGGGCCTGGGCCGGCTGGCAGCCTGCTTTCTTGACTCCATGGCAACACTGGGCCTGGCCGCCTATGGCTACGGGATTCGCTATGAGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000164139.4
CDS CCA 72 bp AAGATGACACGGAGGCGGTCACCCACTGCCGGGTCATaGTTGACCACATCCCCGATGGCTGTGACGAGTCTG +
Preference number: 6 (lower is better)
Translates to: KMTRRRSPTAGS*LTTSPMAVTSL
Trigger: CAGACTCGTCACAGCCATCGGGGATGTGGTCAACCATGACCCGGCAGTGGGTGACCGCCTCCGTGTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164139.4
ENST00000377432.7
ENST00000462303.1
CDS CAA 72 bp ATGACACGGAGGCGGTCACCCACTGCCGGGTCATGGTaGACCACATCCCCGATGGCTGTGACGAGTCTGATG +
Preference number: 6 (lower is better)
Translates to: MTRRRSPTAGSW*TTSPMAVTSLM
Trigger: CATCAGACTCGTCACAGCCATCGGGGATGTGGTCAACCATGACCCGGCAGTGGGTGACCGCCTCCGTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164139.4
ENST00000377432.7
ENST00000462303.1
CDS GCA 72 bp ACGTTCTCCACGCCGGCCAGGCCACGCACACTGATTTaGTTTCTTTTCTCTTGGTCTGACAGGGGCCGGGAC +
Preference number: 6 (lower is better)
Translates to: TFSTPARPRTLI*FLFSWSDRGRD
Trigger: GTCCCGGCCCCTGTCAGACCAAGAGAAAAGAAAGCAAATCAGTGTGCGTGGCCTGGCCGGCGTGGAGAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CCA 72 bp AAGTCTTTGAAGATGGTCTTCTTGAGGATCTCGGAGTaGATGCGCGCCACGCCGTTGACGGCGTGCGACCCC +
Preference number: 6 (lower is better)
Translates to: KSLKMVFLRISE*MRATPLTACDP
Trigger: GGGGTCGCACGCCGTCAACGGCGTGGCGCGCATCCACTCCGAGATCCTCAAGAAGACCATCTTCAAAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS CAA 72 bp CTGGCCCAAGAGAGTGTGACAGACTCAAGGGCTGGTTaGGGGTCTGGTCTGGAGGCTCAGATGGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: LAQESVTDSRAG*GSGLEAQMASS
Trigger: GGATGAGGCCATCTGAGCCTCCAGACCAGACCCCAAACCAGCCCTTGAGTCTGTCACACTCTCTTGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164139.4
ENST00000377432.7
ENST00000483742.1
CDS TCA 72 bp CATCCTGCAGCCAGAGGGTTCTTCCAGGCCTCGTTCTaGGCATGCGGGACCATGCTCACAACATCTCACAGC +
Preference number: 6 (lower is better)
Translates to: HPAARGFFQASF*ACGTMLTTSHS
Trigger: GCTGTGAGATGTTGTGAGCATGGTCCCGCATGCTCAGAACGAGGCCTGGAAGAACCCTCTGGCTGCAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS CAA 90 bp GCCACATCCCGAATGAAAGCTTCATCATCCACAAAGGAGAGCAGTTaGCGCAGCTGGTCCAGGTCAGAGATGAAGTCCTCCCCGATGCGC +
Preference number: 6 (lower is better)
Translates to: ATSRMKASSSTKESS*RSWSRSEMKSSPMR
Trigger: GCGCATCGGGGAGGACTTCATCTCTGACCTGGACCAGCTGCGCAAACTGCTCTCCTTTGTGGATGATGAAGCTTTCATTCGGGATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7
CDS GCA 72 bp TTTTCTCCTCCAGTAGCCCAAGTCCATATCCGGCCTTaGCCTGGGGCAGCAAGAGCAGCTAACAGGTACAAC +
Preference number: 6 (lower is better)
Translates to: FSPPVAQVHIRP*PGAARAANRYN
Trigger: GTTGTACCTGTTAGCTGCTCTTGCTGCCCCAGGGCAAGGCCGGATATGGACTTGGGCTACTGGAGGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS GCA 72 bp GAAACCAGCGCTCCCCACAAAATCTCTAATCCCTCGTaGGACTCTCTAGTCCCTTGTGCGACTCTCAGGCAA +
Preference number: 6 (lower is better)
Translates to: ETSAPHKISNPS*DSLVPCATLRQ
Trigger: TTGCCTGAGAGTCGCACAAGGGACTAGAGAGTCGCACGAGGGATTAGAGATTTTGTGGGGAGCGCTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS CCA 72 bp ATGCCAACTCTGGGAAGCTGTTGTGGGAGTGTAAACTaGGAGAAACTTTCTGGAAAGCAGTTTGGCAATCTG +
Preference number: 6 (lower is better)
Translates to: MPTLGSCCGSVN*EKLSGKQFGNL
Trigger: CAGATTGCCAAACTGCTTTCCAGAAAGTTTCTCCCAGTTTACACTCCCACAACAGCTTCCCAGAGTTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483742.1
CDS TCA 72 bp ACTTGTTTTCCTGCTTCACTTTGGCCACATCCCGAATaGAAGCTTCATCATCCACAAAGGAGAGCAGTTTGC +
Preference number: 6 (lower is better)
Translates to: TCFPASLWPHPE*KLHHPQRRAVC
Trigger: GCAAACTGCTCTCCTTTGTGGATGATGAAGCTTTCATTCGGGATGTGGCCAAAGTGAAGCAGGAAAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164139.4
ENST00000377432.7