Pregenerated sensors for PYDC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000169900Ensembl transcript IDs: ENST00000302964.4, ENST00000568383.5
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTaGTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: GLEARRRPWSPRWRH*CCLTRLVRAWGWLH Trigger: GTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR GCA 90 bp | TGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCTTCACAGGCGTTaGATTACTCCTTTTGCCTTGACCCGCCTCCAGCTCAGAGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: CLTRLVRAWGWLHRR*ITPFALTRLQLRVA Trigger: GGCCACTCTGAGCTGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CCA 90 bp | GTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTaGTGCGCGCGTGGGGCTGGCTTCACAGGCGTTGCATTACTCCTT | + |
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Preference number: 1 (lower is better) Translates to: VLGPRGGDTAVVLRD*CARGAGFTGVALLL Trigger: AAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CCA 90 bp | TGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTaGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTGACCCGCCTC | + |
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Preference number: 1 (lower is better) Translates to: WRHCCCLTRLVRAWG*LHRRCITPFALTRL Trigger: GAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CCA 90 bp | CCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTaGGGCTGGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTGACC | + |
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Preference number: 1 (lower is better) Translates to: PRWRHCCCLTRLVRA*GWLHRRCITPFALT Trigger: GGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CAA 90 bp | GGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTaGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCTTCACAGGCG | + |
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Preference number: 2 (lower is better) Translates to: GGTEASLVPEVETLL*SYATGARVGLASQA Trigger: CGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGTGTGCGCGCGTGGGGCTaGCTTCACAGGCGTTGCATT | + |
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Preference number: 2 (lower is better) Translates to: GLEARRRPWSPRWRHCCCVRAWG*LHRRCI Trigger: AATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCAC...ACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGTGGCTTCACAGGCGTTaGATTACTCCTTTTGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GSGGTEASLVPEVETLLLWLHRR*ITPFAL Trigger: CAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCA...CAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR GCA 72 bp | GCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTaGTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: ARRRPWSPRWRH*CCLTRLVRAWG Trigger: GCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CCA 72 bp | CCCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTaGTGCGCGCGTGGGGCTGGCTTCACAGGCGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: PRGGDTAVVLRD*CARGAGFTGVA Trigger: TGCAACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CCA 72 bp | GGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTaGAGACACTGCTGTTGTCTTACGCGACTGGTGCGC | + |
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Preference number: 3 (lower is better) Translates to: GLEARRRPWSPR*RHCCCLTRLVR Trigger: GCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CCA 72 bp | TGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTaGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: CCCLTRLVRAWG*LHRRCITPFAL Trigger: CAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CCA 72 bp | AGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTaGGGCTGGCTTCACAGGCGTTGCATTACTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: RHCCCLTRLVRA*GWLHRRCITPF Trigger: AAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | GCGGGGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTCCACGATATCTAGCTaGCCGAGCGCGCCCCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AGSGGTEASLVPEVETLLSTISS*PSAPRG Trigger: CCCGCGGGGCGCGCTCGGGCAGCTAGATATCGTGGA...CAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACCCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | CCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTGTGCAGCAGGTGGAGCTaGCGCCCCCGGGGATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PEVETLLLSYATGARVGLCSRWS*RPRGCP Trigger: GGGACATCCCCGGGGGCGGCAGCTCCACCTGCTGCA...CAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | GAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCTTCACAGCCTCACGCAGCCCGCTaGAGCCGTGCGGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ETLLLSYATGARVGLASQPHAAR*SRAASS Trigger: GGAGGAGGCCGCACGGCTGCAGCGGGCTGCGTGAGG...CTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | GCGGGGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGGAGCCTCCGAGGGCCTaGAGCCATCAGGTCCTACCT | + |
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Preference number: 4 (lower is better) Translates to: AGSGGTEASLVPEVETLLEPPRA*SHQVLP Trigger: AGGTAGGACCTGATGGCTCCAGGCCCTCGGAGGCTC...CAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | GGGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGGTTGTCTTACGCGACTaGTGCGCGCGTGGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GSGGTEASLVPEVETLLLVVLRD*CARGAG Trigger: GCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAAC...CAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | CGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCGCACGGAGGCGTCCTTaGTCCCCGAGGTGGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: RGGDTAVVLRDWCARGAGARRRP*SPRWRH Trigger: GTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGC...GCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | GTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGTCGGAGGAGGCGGGGTCTaGAGGCACGGAGGCGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VWRHGGVLGPRGGDTAVVGGGGV*RHGGVL Trigger: AAGGACGCCTCCGTGCCTCCAGACCCCGCCTCCTCC...GACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| 3UTR CAA 72 bp | GAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTaGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: EASLVPEVETLL*SYATGARVGLA Trigger: AGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR TCA 90 bp | GAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTTCAGCCCTGCGCCTCTaGGCCTCCGAGGGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EASLVPEVETLLLSYATGSALRL*ASEGLE Trigger: CTCCAGGCCCTCGGAGGCTCAGAGGCGCAGGGCTGA...ACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | GCGCGCGTGGGGCTGGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTGACCCGCTTTCCTGCAGCAGGTaGAGCTGCCGCCCCCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: ARVGLASQALHYSFCLDPLSCSR*SCRPRG Trigger: TCCCCGGGGGCGGCAGCTCCACCTGCTGCAGGAAAG...CGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | GGGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGAGGTCCTACCTTTCCTaGAGCAGGTGGAGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GSGGTEASLVPEVETLLLRSYLS*SRWSCR Trigger: GCGGCAGCTCCACCTGCTGCAGGAAAGGTAGGACCT...CAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | GCGCGCGTGGGGCTGGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTGACCCGCGGCCTCCTCCAACATaGGCATGTCGCGCAGCACGG | + |
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Preference number: 4 (lower is better) Translates to: ARVGLASQALHYSFCLDPRPPPT*ACRAAR Trigger: CCGTGCTGCGCGACATGCGCATGTTGGAGGAGGCCG...CGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | GAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTAGCCCGCTGCAGCCGTaGGGCCTCCTCCAACATGCG | + |
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Preference number: 4 (lower is better) Translates to: EASLVPEVETLLLSYATGSPLQP*GLLQHA Trigger: CGCATGTTGGAGGAGGCCGCACGGCTGCAGCGGGCT...ACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | AGGCGGGGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCCCGAGGTGGAGACACTaGTGTTGTCTTACGCGACTG | + |
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Preference number: 4 (lower is better) Translates to: RRGLEARRRPWSPRWRHCPRWRH*CCLTRL Trigger: CAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGG...GCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACCCCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | GGTCCCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGCCAGCACCTTCAGGATaGCCTCGCGCTTCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GPRGGDTAVVLRDWCARGPAPSG*PRASFP Trigger: TGGGAACGAAGCGCGAGGCCATCCTGAAGGTGCTGG...CCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | CGCGTGGGGCTGGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTGACCCGCCTGACAGGTGCAGGGGCTaGAGGAGGCGGGGTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RVGLASQALHYSFCLDPPDRCRG*RRRGLE Trigger: CTCCAGACCCCGCCTCCTCCAGCCCCTGCACCTGTC...AGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | GGTCCCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGCACGACGAGCTCGGCTaGGTAGTCCTCGTAGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: GPRGGDTAVVLRDWCARGHDELG*VVLVVG Trigger: TCCTACTACGAGGACTACGCAGCCGAGCTCGTCGTG...CCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | GAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGTCTTACGCGACTGGTaGGCGCGTGGGGCTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EASLVPEVETLLLSYATGVLRDW*ARGAGF Trigger: GAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGAC...ACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | GTGGGGCTGGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTGACCCGCCTCCACGACTGGTGCGCGCGTaGGGCTGGCTTCACAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: VGLASQALHYSFCLDPPPRLVRA*GWLHRR Trigger: ACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCG...TGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | GGGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGAGAATAAATGACAGGTaGAGGGGCTGGAGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GSGGTEASLVPEVETLLLRINDR*RGWRRR Trigger: CCGCCTCCTCCAGCCCCTGCACCTGTCATTTATTCT...CAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | TGGGGCTGGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTGACCCGCCTCCAGCGCGCTTCGTTCCCATaGCTCAGCCCTGCGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: WGWLHRRCITPFALTRLQRASFP*LSPAPL Trigger: CAGAGGCGCAGGGCTGAGCCATGGGAACGAAGCGCG...CTGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | TGGCTTCACAGGCGTTGCATTACTCCTTTTGCCTTGACCCGCCTCCAGCTCAGAGCCTCCAGCTCAGAGTaGCCCTCACGCAGCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: WLHRRCITPFALTRLQLRASSSE*PSRSPL Trigger: CAGCGGGCTGCGTGAGGGCCACTCTGAGCTGGAGGC...TCTGAGCTGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | CACAGGCGTTGCATTACTCCTTTTGCCTTGACCCGCCTCCAGCTCAGAGTGGCCGTGCGCGCGTGGGGCTaGCTTCACAGGCGTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: HRRCITPFALTRLQLRVAVRAWG*LHRRCI Trigger: AATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCAC...GGCCACTCTGAGCTGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR TCA 90 bp | TGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCTTCACCGACCAGCTTGTCGGTaGGGTCCACGATATCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: WRHCCCLTRLVRAWGWLHRPACR*GPRYLA Trigger: AGCTAGATATCGTGGACCTCACCGACAAGCTGGTCG...GTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR GCA 90 bp | CCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGTGGCTTCACAGGCGTTaGATTACTCCTTTTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PRWRHCCCLTRLVRAWGWWLHRR*ITPFAL Trigger: CAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCA...CCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CCA 90 bp | GAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTCCTTGGTCCCCGAGGTaGAGACACTGCTGTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: EASLVPEVETLLLSYATGPWSPR*RHCCCL Trigger: AAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGG...ACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS GCA 90 bp | TGCCTTGACCCGCCTCCAGCTCAGAGTGGCCCTCACGCAGCCCGCTaGAGCCGTGCGGCCTCCTCCAACATGCGCATGTCGCGCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: CLDPPPAQSGPHAAR*SRAASSNMRMSRST Trigger: CGTGCTGCGCGACATGCGCATGTTGGAGGAGGCCGCACGGCTGCAGCGGGCTGCGTGAGGGCCACTCTGAGCTGGAGGCGGGTCAAGGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CAA 90 bp | CGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCGGCACGGAGGCGTCCTaGGTCCCCGAGGTGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: RGGDTAVVLRDWCARGAGGTEAS*VPEVET Trigger: TGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCC...GCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS CCA 90 bp | TTCGTTCCCATGGCTCAGCCCTGCGCCTCTGAGCCTCCGAGGGCCTaGAGCCATCAGGTCCTACCTTTCCTGCAGCAGGTGGAGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: FVPMAQPCASEPPRA*SHQVLPFLQQVELP Trigger: CGGCAGCTCCACCTGCTGCAGGAAAGGTAGGACCTGATGGCTCCAGGCCCTCGGAGGCTCAGAGGCGCAGGGCTGAGCCATGGGAACGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CAA 90 bp | GCGGGGTCTGGAGGCACGGAGGCGTCCTTGGTCCCCGAGGTGGAGACACTGCTGGTGGAGACACTGCTGTaGTCTTACGCGACTGGTGCG | + |
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Preference number: 5 (lower is better) Translates to: AGSGGTEASLVPEVETLLVETLL*SYATGA Trigger: CGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCAC...CAGCAGTGTCTCCACCTCGGGGACCAAGGACGCCTCCGTGCCTCCAGACCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS-3UTR CAA 90 bp | CGAGGTGGAGACACTGCTGTTGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCATTACTCCTTTTGCCTaGACCCGCCTCCAGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RGGDTAVVLRDWCARGAGITPFA*TRLQLR Trigger: TCTGAGCTGGAGGCGGGTCAAGGCAAAAGGAGTAAT...GCCAGCCCCACGCGCGCACCAGTCGCGTAAGACAACAGCAGTGTCTCCACCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS GCA 90 bp | TGTCTTACGCGACTGGTGCGCGCGTGGGGCTGGCTTCACAGGCGTTaGATTACTCCTTTTGCCTTGACCCGCCTCCTGTGCTTAAGACCC | + |
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Preference number: 5 (lower is better) Translates to: CLTRLVRAWGWLHRR*ITPFALTRLLCLRP Trigger: GGGTCTTAAGCACAGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCACGCGCGCACCAGTCGCGTAAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568383.5 |
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| CDS GCA 72 bp | ACGCAGCCCGCTGCAGCCGTGCGGCCTCCTCCAACATaGGCATGTCGCGCAGCACGGCCACGACGAGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: TQPAAAVRPPPT*ACRAARPRRAR Trigger: CCGAGCTCGTCGTGGCCGTGCTGCGCGACATGCGCATGTTGGAGGAGGCCGCACGGCTGCAGCGGGCTGCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS GCA 72 bp | CTCCGAGGGCCTGGAGCCATCAGGTCCTACCTTTCCTaGAGCAGGTGGAGCTGCCGCCCCCGGGGATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LRGPGAIRSYLS*SRWSCRPRGCP Trigger: GGGACATCCCCGGGGGCGGCAGCTCCACCTGCTGCAGGAAAGGTAGGACCTGATGGCTCCAGGCCCTCGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS CCA 72 bp | CCTGGAGCCATCAGGTCCTACCTTTCCTGCAGCAGGTaGAGCTGCCGCCCCCGGGGATGTCCCGGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PGAIRSYLSCSR*SCRPRGCPGKE Trigger: CTCCTTCCCGGGACATCCCCGGGGGCGGCAGCTCCACCTGCTGCAGGAAAGGTAGGACCTGATGGCTCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS CCA 72 bp | CCAGCACCTTCAGGATGGCCTCGCGCTTCGTTCCCATaGCTCAGCCCTGCGCCTCTGAGCCTCCGAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PAPSGWPRASFP*LSPAPLSLRGP Trigger: AGGCCCTCGGAGGCTCAGAGGCGCAGGGCTGAGCCATGGGAACGAAGCGCGAGGCCATCCTGAAGGTGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS CCA 72 bp | ATGGCTCAGCCCTGCGCCTCTGAGCCTCCGAGGGCCTaGAGCCATCAGGTCCTACCTTTCCTGCAGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: MAQPCASEPPRA*SHQVLPFLQQV Trigger: CACCTGCTGCAGGAAAGGTAGGACCTGATGGCTCCAGGCCCTCGGAGGCTCAGAGGCGCAGGGCTGAGCCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS GCA 72 bp | GTGGGGCTGGCTTCACAGGCGTTGCATTACTCCTTTTaGCTTGACCCGCCTCCAGCTCAGAGTGGCCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: VGLASQALHYSF*LDPPPAQSGPH Trigger: GTGAGGGCCACTCTGAGCTGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302964.4 |
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| CDS GCA 72 bp | CGTTGCATTACTCCTTTTGCCTTGACCCGCCTCCTGTaGTTAAGACCCCAACCTCAGGGCAACCCGCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: RCITPFALTRLL*LRPQPQGNPLG Trigger: TCCGAGCGGGTTGCCCTGAGGTTGGGGTCTTAAGCACAGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568383.5 |
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| CDS CAA 72 bp | GGCTGGCTTCACAGGCGTTGCATTACTCCTTTTGCCTaGACCCGCCTCCTGTGCTTAAGACCCCAACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GWLHRRCITPFA*TRLLCLRPQPQ Trigger: CTGAGGTTGGGGTCTTAAGCACAGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568383.5 |
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