RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PYCR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000183010

Ensembl transcript IDs: ENST00000329875.13, ENST00000337943.9, ENST00000402252.6, ENST00000403172.8, ENST00000405481.8, ENST00000577624.5, ENST00000577756.5, ENST00000579698.5, ENST00000581271.5, ENST00000582198.5, ENST00000584848.5, ENST00000585215.5, ENST00000619204.4, ENST00000629768.2

Found 632 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTaGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGAGAGG +
Preference number: 1 (lower is better)
Translates to: ACLAAKRGCGPSRWT*DAWTLWPFSHGKER
Trigger: CCTCTCCTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR CCA 90 bp GGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTaGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAG +
Preference number: 1 (lower is better)
Translates to: GSACLAAKRGCGPSR*TWDAWTLWPFSHGK
Trigger: CTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR TCA 90 bp TGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCT +
Preference number: 1 (lower is better)
Translates to: WAGKHLQTTEISSGK*CGPSLAMSLAGPCA
Trigger: AGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR TCA 90 bp GGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTaGCCTTTGCTCTCAGGAAGGAGCCCGTGCCAGCTGATACTGGAG +
Preference number: 1 (lower is better)
Translates to: GRGIPPLLSLHRGGP*PLLSGRSPCQLILE
Trigger: CTCCAGTATCAGCTGGCACGGGCTCCTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR GCA 90 bp CAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTaGTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTGG +
Preference number: 1 (lower is better)
Translates to: QQPKEPFPQMSMGSA*LAAKRGCGPSRWTW
Trigger: CCAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR GCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTaGGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGAC +
Preference number: 1 (lower is better)
Translates to: SPAAQGALSPNVHGI*VLGSQEGLWPFTLD
Trigger: GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR CCA 90 bp CCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTaGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTT +
Preference number: 1 (lower is better)
Translates to: PNVHGICVLGSQEGL*PFTLDLGCLDPLAL
Trigger: AAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR CCA 90 bp CAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCAC +
Preference number: 1 (lower is better)
Translates to: QKFTSSPRSPFPKCP*DLRAWQPRGAVALH
Trigger: GTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACGGCCGGGAGGGGGCGTaGGATCCCACCTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: HGICVLGSQEGLWPFTLDGREGA*DPTSAE
Trigger: CTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC...GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: SGRTCQSLPAGARLRGSSESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...GCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR TCA 90 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTGGAGTAGGAGTGGGTaGAGACCCTCCGGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: HGICVLGSQEGLWPFTLDWSRSG*RPSGLP
Trigger: CGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCA...GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGATGTGGCCCCTCCCTaGCTATGTCCCTGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: WLAPALIRATESGPLWGPDVAPP*LCPWLA
Trigger: GGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPSILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000629768.2
3UTR CAA 90 bp TGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTaGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: CVLGSQEGLWPFTLD*GCLDPLALLTREGE
Trigger: CTCTCCTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp GAGGTCAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCTGGAGTAGGAGTGGGTaGAGACCCTCCGGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: EVRSRRWWPQKFTSSPRSWSRSG*RPSGLP
Trigger: CGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCA...GCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp CCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGAGGATCCCACCTCTGCTaGGCCTTCACAGAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: PWDLRAWQPRGAVALHAGGSHLC*AFTEGV
Trigger: GACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCC...TCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp ACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGGGCCGGGAGGGGGCGTaGGATCCCACCTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: TSSPRSPFPKCPWDLRAWGREGA*DPTSAE
Trigger: CTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC...CCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCGGCCGGGAGGGGGCGTaGGATCCCACCTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALGREGA*DPTSAE
Trigger: CTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTGGAGCCCGTGCCAGCTaGTACTGGAGTAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLGARAS*YWSRSG
Trigger: CCCACTCCTACTCCAGTATCAGCTGGCACGGGCTCC...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCTGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 2 (lower is better)
Translates to: WLAPALIRATESGPLWGPCGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR CAA 90 bp GGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTaGACCTTTGCTCTCAGGAAGGAGCCCGTGCCAGCTGATACTGGA +
Preference number: 2 (lower is better)
Translates to: GAWDPTSAEPSQRGS*TFALRKEPVPADTG
Trigger: TCCAGTATCAGCTGGCACGGGCTCCTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: MSLAGPCADQSHRKWATLGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp GCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCGGATCCCACCTCTGCTaGGCCTTCACAGAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: AAQGALSPNVHGICVLGSGSHLC*AFTEGV
Trigger: GACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCC...GCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR GCA 90 bp CCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGAGGGGTCCTTGACCTTTaGTCTCAGGAAGGAGCCCGT +
Preference number: 2 (lower is better)
Translates to: PWDLRAWQPRGAVALHAGGVLDL*SQEGAR
Trigger: ACGGGCTCCTTCCTGAGAGCAAAGGTCAAGGACCCC...TCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR GCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACGGACGTGTCAATCCTTaGCCGCTGGGGCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: VEVGESTPVLGWEALADHGRVNP*PLGPGC
Trigger: GCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCC...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CCA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 2 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGCCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 2 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTAGCCAAGAGGGGCTGTaGCCCTTCACGCTGGACTTG +
Preference number: 2 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLSQEGL*PFTLDL
Trigger: CAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCT...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: HGICVLGSQEGLWPFTLDRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 2 (lower is better)
Translates to: WLCPWLAPALIRATESGPPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CCA 90 bp GGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 2 (lower is better)
Translates to: GLGSTCRPQRFPVGSDVAPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...GGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GAGGTCAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCAGGAGCAGGAGGTGGTaGCCACAGAAGTTCACCAGC +
Preference number: 2 (lower is better)
Translates to: EVRSRRWWPQKFTSSPRSRSRRW*PQKFTS
Trigger: GCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCT...GCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGTGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 2 (lower is better)
Translates to: GALSPNVHGICVLGSQEGCGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000629768.2
3UTR-3UTR CCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTTCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: RKEVEVGESTPVLGWEALSILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR TCA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: GWEALADHRDFQWEVMWPGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp TGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: WPQKFTSSPRSPFPKCPWGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...CCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR GCA 90 bp CCCGTGCCAGCTGATACTGGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGAGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 2 (lower is better)
Translates to: PVPADTGVGVGEDPPGSRGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...TCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCAGTATCAGCTGGCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR GCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGGACGTGTCAATCCTTaGCCGCTGGGGCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: RKEVEVGESTPVLGWEALGRVNP*PLGPGC
Trigger: GCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCC...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CCA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGATGTGGCCCCTCCCTaGCTATGTCCCTGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: LGWEALADHRDFQWEVMWDVAPP*LCPWLA
Trigger: GGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATC...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp CAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGAGGTTTCTCCCTGAATaGAGGGCAGGGAGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: QLKASTIPPTVTTLPHRQRFLPE*RAGRGR
Trigger: CCGGCCCCTCCCTGCCCTCCATTCAGGGAGAAACCT...CTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCGATGCCTGGACCCTCTaGCCCTTCTCACACGGGAAG +
Preference number: 2 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALDAWTL*PFSHGK
Trigger: CTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATC...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGTGGGATCTGCGTGCTTaGCAGCCAAGAGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGWDLRA*QPRGAV
Trigger: CACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp TCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGAGAGGTTTCTCCCTaGATGGAGGGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SVEGLHYSTHSNHPPTQAGEVSP*MEGREG
Trigger: CCCCTCCCTGCCCTCCATTCAGGGAGAAACCTCTCC...TGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 2 (lower is better)
Translates to: EVEVGESTPVLGWEALADPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR GCA 90 bp CCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 2 (lower is better)
Translates to: PFTLDLGCLDPLALLTREGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...TTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: SPAAQGALSPNVHGICVLESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCTGGACTTGGGATGCCTaGACCCTCTGGCCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGWTWDA*TLWPFS
Trigger: TGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCA...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTTGTGGCCCTTCACGCTaGACTTGGGATGCCTGGACC +
Preference number: 2 (lower is better)
Translates to: SPAAQGALSPNVHGICVLCGPSR*TWDAWT
Trigger: GGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GAGGTCAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCTTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: EVRSRRWWPQKFTSSPRSFPKCP*DLRAWQ
Trigger: CTGCCAAGCACGCAGATCCCATGGACATTTGGGGAA...GCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCAGGAGCAGGAGGTGGTaGCCACAGAAGTTCACCAGC +
Preference number: 2 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGRSRRW*PQKFTS
Trigger: GCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCT...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGTGGTGGCAGGATGGTaGTCAGGCAGGACGTGTCAA +
Preference number: 2 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCVVAGW*SGRTCQ
Trigger: TTGACACGTCCTGCCTGACCACCATCCTGCCACCAC...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629768.2
3UTR-3UTR CCA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACAAGGTGGTGGCAGGATaGTGGTCAGGCAGGACGTGT +
Preference number: 2 (lower is better)
Translates to: EVEVGESTPVLGWEALADKVVAG*WSGRTC
Trigger: ACACGTCCTGCCTGACCACCATCCTGCCACCACCTT...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR TCA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR GCA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 2 (lower is better)
Translates to: MSLAGPCADQSHRKWATLGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR GCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 2 (lower is better)
Translates to: LCPWLAPALIRATESGPLGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR GCA 90 bp CCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 2 (lower is better)
Translates to: PKCPWDLRAWQPRGAVALGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...AAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: WEALADHRDFQWEVMWPLESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: GRALSNQLKASTIPPTVTESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACAATCCACCCCTGTTCTaGGCTGGGAAGCACTTGCAG +
Preference number: 2 (lower is better)
Translates to: VEVGESTPVLGWEALADHNPPLF*AGKHLQ
Trigger: CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATT...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTTGGACTTGGGATGCCTaGACCCTCTGGCCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: SPAAQGALSPNVHGICVLWTWDA*TLWPFS
Trigger: TGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCA...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp TCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCACCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 2 (lower is better)
Translates to: SVEGLHYSTHSNHPPTQAPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...TGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629768.2
3UTR-3UTR CCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTAAGGTGGTGGCAGGATaGTGGTCAGGCAGGACGTGT +
Preference number: 2 (lower is better)
Translates to: RKEVEVGESTPVLGWEALKVVAG*WSGRTC
Trigger: ACACGTCCTGCCTGACCACCATCCTGCCACCACCTT...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR TCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: WEALADHRDFQWEVMWPLRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: VEVGESTPVLGWEALADHGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCAGAAGTCAGGACACTaGGGGCTGGAAACCAACTTA +
Preference number: 2 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGQKSGH*GLETNL
Trigger: TAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTG...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCGCCTCCCTCCTCATGTaGCAGACAGAAGTCAGGACA +
Preference number: 2 (lower is better)
Translates to: GRALSNQLKASTIPPTVTASLLM*QTEVRT
Trigger: TGTCCTGACTTCTGTCTGCCACATGAGGAGGGAGGC...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 2 (lower is better)
Translates to: VEVGESTPVLGWEALADHKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATAGCACCCAGGTTTCTCCCTGAATaGAGGGCAGGGAGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: GWKPTYKTERARTELIAPRFLPE*RAGRGR
Trigger: CCGGCCCCTCCCTGCCCTCCATTCAGGGAGAAACCT...GGGTGCTATCAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: WEALADHRDFQWEVMWPLGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 2 (lower is better)
Translates to: SPAAQGALSPNVHGICVLKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGAGGAGCAGGAGGTGGTaGCCACAGAAGTTCACCAGC +
Preference number: 2 (lower is better)
Translates to: DTGGWKPTYKTERARTELRSRRW*PQKFTS
Trigger: GCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCT...CAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 2 (lower is better)
Translates to: RKEVEVGESTPVLGWEALKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 2 (lower is better)
Translates to: LGWEALADHRDFQWEVMWKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: DTGGWKPTYKTERARTELGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...CAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATAGCACCCTTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: GWKPTYKTERARTELIAPFPKCP*DLRAWQ
Trigger: CTGCCAAGCACGCAGATCCCATGGACATTTGGGGAA...GGGTGCTATCAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp GCAGACAGAAGTCAGGACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGCAGAAGTCAGGACACTaGGGGCTGGAAACCAACTTA +
Preference number: 2 (lower is better)
Translates to: ADRSQDTGGWKPTYKTERQKSGH*GLETNL
Trigger: TAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTG...CCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CCA 90 bp TTTGCATTAGATTACATTGACATTTTAATCAGTAAGGCAGATGCCCTCCAAGATGATGTGGCCCCTCCCTaGCTATGTCCCTGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: FALDYIDILISKADALQDDVAPP*LCPWLA
Trigger: GGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATC...ATCTTGGAGGGCATCTGCCTTACTGATTAAAATGTCAATGTAATCTAATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR TCA 90 bp TTTGCATTAGATTACATTGACATTTTAATCAGTAAGGCAGATGCCCTCCAAGATGGAGAGGTTTCTCCCTaGATGGAGGGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: FALDYIDILISKADALQDGEVSP*MEGREG
Trigger: CCCCTCCCTGCCCTCCATTCAGGGAGAAACCTCTCC...ATCTTGGAGGGCATCTGCCTTACTGATTAAAATGTCAATGTAATCTAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR CCA 72 bp CCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACAGAGCGGTCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: PCPLGPGCGGAA*CGQKVTERSLQ
Trigger: CTGCAGGGACCGCTCTGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CAA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPRTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000629768.2
3UTR CCA 72 bp TGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTaGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: CLAAKRGCGPSR*TWDAWTLWPFS
Trigger: TGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR CCA 72 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTaGCCCTTCACGCTGGACTTGGGATGCCTGGACCCT +
Preference number: 3 (lower is better)
Translates to: HGICVLGSQEGL*PFTLDLGCLDP
Trigger: AGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp GAGGTCAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCCTTCACGCTGGACTaGGGATGCCTGGACCCTCTG +
Preference number: 3 (lower is better)
Translates to: EVRSRRWWPQKFTSSPRSPFTLD*GCLDPL
Trigger: CAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG...GCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 3 (lower is better)
Translates to: WLAPALIRATESGPLWGPSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CAA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACGAGTCCAGCTTCACCTaGTCCAGGATGGTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHESSFT*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGTGAAGCTGGACTC...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CAA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGCTGCGGGGGAGCAGCTaGGTGTGGCCAGAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGLRGSS*VWPEGD
Trigger: GTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAG...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629768.2
3UTR-3UTR CAA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQRTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CAA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCCCCTTCACGCTGGACTaGGGATGCCTGGACCCTCTG +
Preference number: 3 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGPFTLD*GCLDPL
Trigger: CAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTCCCTTCACGCTGGACTaGGGATGCCTGGACCCTCTG +
Preference number: 3 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCPFTLD*GCLDPL
Trigger: CAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp TTGGTGTGGCCAGAAGGTGACAGAGCGGTCCCTGCAGGGGAGTCCAGCTTCACCTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 3 (lower is better)
Translates to: LVWPEGDRAVPAGESSFTSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...GGTGAAGCTGGACTCCCCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR GCA 72 bp AAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTaGTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGC +
Preference number: 3 (lower is better)
Translates to: KEPFPQMSMGSA*LAAKRGCGPSR
Trigger: GCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR CCA 72 bp ACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: TSSPRSPFPKCP*DLRAWQPRGAV
Trigger: CACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 3 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RKEVEVGESTPVLGWEALRTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CAA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGCTGCGGGGGAGCAGCTaGGTGTGGCCAGAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVLRGSS*VWPEGD
Trigger: GTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAG...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CAA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCTCACAGAGGGGGTCCTaGACCTTTGCTCTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALSQRGS*TFALRK
Trigger: CTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGA...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp TGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 3 (lower is better)
Translates to: WPQKFTSSPRSPFPKCPWSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...CCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629768.2
3UTR TCA 72 bp AAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: KHLQTTEISSGK*CGPSLAMSLAG
Trigger: GCCAGCCAGGGACATAGCCAGGGAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR CCA 72 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCTAGTGACAAGAGAAGA +
Preference number: 3 (lower is better)
Translates to: PALIRATESGPL*GPPSPPSDKRR
Trigger: TCTTCTCTTGTCACTAGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGGAGTCCAGCTTCACCTaGTCCAGGATGGTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKESSFT*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGTGAAGCTGGACTC...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629768.2
3UTR-3UTR CAA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGTGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 3 (lower is better)
Translates to: LGWEALADHRDFQWEVMWWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCTGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 3 (lower is better)
Translates to: WEALADHRDFQWEVMWPLWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTTGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 3 (lower is better)
Translates to: RKEVEVGESTPVLGWEALWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 3 (lower is better)
Translates to: WEALADHRDFQWEVMWPLERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp GACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATGGGATCTGCGTGCTaGGCAGCCAAGAGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: DTGGWKPTYKTERARTELMGSAC*AAKRGC
Trigger: ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCAT...CAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGAGTCCAGCTTCACCTaGTCCAGGATGGTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: RKEVEVGESTPVLGWEALESSFT*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGTGAAGCTGGACTC...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR-3UTR CAA 90 bp GCAGACAGAAGTCAGGACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGTCACAGAGGGGGTCCTaGACCTTTGCTCTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: ADRSQDTGGWKPTYKTERSQRGS*TFALRK
Trigger: CTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGA...CCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR-3UTR CAA 90 bp TTTGCATTAGATTACATTGACATTTTAATCAGTAAGGCAGATGCCCTCCAAGATCCCTTCACGCTGGACTaGGGATGCCTGGACCCTCTG +
Preference number: 3 (lower is better)
Translates to: FALDYIDILISKADALQDPFTLD*GCLDPL
Trigger: CAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG...ATCTTGGAGGGCATCTGCCTTACTGATTAAAATGTCAATGTAATCTAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GTGGTCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGGGCCCCGAGGCGGACTaGCAGGCGCCTTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VVRQDVSILARWGQAAGEGPEAD*QAPWKS
Trigger: GGACTTCCAAGGCGCCTGGCAGTCCGCCTCGGGGCC...CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGACCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000577756.5
ENST00000629768.2
CDS-3UTR TCA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGGGCATCCAGGGCTGTaGATGCGTAGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: VAPPWLCPWLAPALIRATGHPGL*MRRRGR
Trigger: GCGGCCCCGCCTACGCATTCACAGCCCTGGATGCCC...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCCCACCTGGGCGTGCGTaGCTGTGGCATACACGGTGG +
Preference number: 4 (lower is better)
Translates to: GREGAWDPTSAEPSQRGSPPGRA*LWHTRW
Trigger: CCACCGTGTATGCCACAGGCACGCACGCCCAGGTGG...GGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGGGAGGGGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGCGTGCGTGCCTGTaGCATACACGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QGGAGRGRGIPPLLSLHRGRACL*HTRWPP
Trigger: AGGGGGCCACCGTGTATGCCACAGGCACGCACGCCC...TCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCCCCTCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTTGGGTGTGGCCAGAAGGTaGCAGAGCGGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRTCQSLPAGARLRGSSLGVARR*QSGPCR
Trigger: CCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACC...CAAGCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR TCA 90 bp GGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCGGATCCCACCTCTGCTaGGCCTTCACAGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GREGAWDPTSAEPSQRGSGSHLC*AFTEGV
Trigger: GACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCC...GGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGGGAGGGGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGACTGTGGCATACACGGTaGCCCCCTCCCGCACCACGA +
Preference number: 4 (lower is better)
Translates to: QGGAGRGRGIPPLLSLHRLWHTR*PPPAPR
Trigger: TCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAG...TCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCCCCTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGGGCGTGCGTGCCTGTaGCATACACGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VAPPWLCPWLAPALIRATGRACL*HTRWPP
Trigger: AGGGGGCCACCGTGTATGCCACAGGCACGCACGCCC...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTGGTCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGGATGTGGCCCCTCCCTaGCTATGTCCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VVRQDVSILARWGQAAGEDVAPP*LCPWLA
Trigger: GGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATC...CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGTCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCGATGTGGCCCCTCCCTaGCTATGTCCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: WSGRTCQSLPAGARLRGSDVAPP*LCPWLA
Trigger: GGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATC...GCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
3UTR CAA 72 bp TCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTaGGTGTGGCCAGAAGGTGACAGAGCGGTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLPAGARLRGSS*VWPEGDRAVPA
Trigger: TGCAGGGACCGCTCTGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR TCA 90 bp CAGGGAGGGGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAAGACGCCTGCTGCTGTaGAGCCCTTGGCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: QGGAGRGRGIPPLLSLHRRRLLL*SPWPGQ
Trigger: TTGCCCTGGCCAAGGGCTTCACAGCAGCAGGCGTCT...TCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCCCCTCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACGGTGTGGCCAGAAGGTaGCAGAGCGGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHGVARR*QSGPCR
Trigger: CCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACC...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCGGCAGCCAAGACGCCTaGTGCTGTGAAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SGRTCQSLPAGARLRGSSGSQDA*CCEALG
Trigger: GCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCTGCC...GCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR GCA 90 bp GTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGCCCCGAGGCGGACTaGCAGGCGCCTTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VALHAGLGMPGPSGPSHTGPEAD*QAPWKS
Trigger: GGACTTCCAAGGCGCCTGGCAGTCCGCCTCGGGGCC...CGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCGGCCCCGAGGCGGACTaGCAGGCGCCTTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTGPEAD*QAPWKS
Trigger: GGACTTCCAAGGCGCCTGGCAGTCCGCCTCGGGGCC...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTGGTCAGCCATGGACTaGAGCTCCCAGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGRTCQSLPAGARLRGSSWSAMD*SSQEGL
Trigger: CAGGCCCTCCTGGGAGCTGCAGTCCATGGCTGACCA...GCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577756.5
ENST00000629768.2
CDS-3UTR CCA 90 bp CCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACACCCCGCCCAGAACTaGGCTACCGTCGCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PWDLRAWQPRGAVALHAGHPAQN*ATVAPH
Trigger: GTGGGGCGCGACGGTAGCCCAGTTCTGGGCGGGGTG...TCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR CCA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACACTGTGGCATACACGGTaGCCCCCTCCCGCACCACGA +
Preference number: 4 (lower is better)
Translates to: VAPPWLCPWLAPALIRATLWHTR*PPPAPR
Trigger: TCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAG...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACGATGTGGCCCCTCCCTaGCTATGTCCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHDVAPP*LCPWLA
Trigger: GGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATC...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCAGGGCATCCAGGGCTGTaGATGCGTAGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPGHPGL*MRRRGR
Trigger: GCGGCCCCGCCTACGCATTCACAGCCCTGGATGCCC...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCGGTGTGGCCAGAAGGTaGCAGAGCGGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPGVARR*QSGPCR
Trigger: CCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACC...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCCGTGCCAGCTGATACTGGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGACCAACCCAGCTACCGTaGGCGGGTCGTACCCACCCC +
Preference number: 4 (lower is better)
Translates to: PVPADTGVGVGEDPPGSRPTQLP*AGRTHP
Trigger: GGGGTGGGTACGACCCGCGCACGGTAGCTGGGTTGG...TCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCAGTATCAGCTGGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329875.13
CDS-3UTR GCA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACGGCAGCCAAGACGCCTaGTGCTGTGAAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHGSQDA*CCEALG
Trigger: GCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCTGCC...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCCCACCTGGGCGTGCGTaGCTGTGGCATACACGGTGG +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPPPGRA*LWHTRW
Trigger: CCACCGTGTATGCCACAGGCACGCACGCCCAGGTGG...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACG +
Preference number: 4 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHSSTWA*VPVAYT
Trigger: CGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGA...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CAGGGAGGGGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGATGGTCAGCCATGGACTaGAGCTCCCGTGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: QGGAGRGRGIPPLLSLHRWSAMD*SSRVRM
Trigger: CATCCGCACACGGGAGCTGCAGTCCATGGCTGACCA...TCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCCCCTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CCA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACACTGTCCGGAGACCCCTaGCCCAAAGCCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: VAPPWLCPWLAPALIRATLSGDP*PKAPTD
Trigger: ATCTGTGGGGGCTTTGGGCCAGGGGTCTCCGGACAG...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCCTGTGGCATACACGGTaGCCCCCTCCCGCACCACGA +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPLWHTR*PPPAPR
Trigger: TCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAG...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGGGCGTGCGTGCCTGTaGCATACACGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPGRACL*HTRWPP
Trigger: AGGGGGCCACCGTGTATGCCACAGGCACGCACGCCC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCTCCCGTCCTCCACCTaGGCGTGCGTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPLPSST*ACVPVA
Trigger: TGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAG...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SGRTCQSLPAGARLRGSSCGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...GCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCAAGGTGGTGGCAGGATaGTGGTCAGGCAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: GREGAWDPTSAEPSQRGSKVVAG*WSGRTC
Trigger: ACACGTCCTGCCTGACCACCATCCTGCCACCACCTT...GGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGTCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCGATGCCTGGACCCTCTaGCCCTTCTCACACGGGAAG +
Preference number: 4 (lower is better)
Translates to: WSGRTCQSLPAGARLRGSDAWTL*PFSHGK
Trigger: CTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATC...GCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629768.2
CDS-3UTR TCA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTGGGCATCCAGGGCTGTaGATGCGTAGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFGHPGL*MRRRGR
Trigger: GCGGCCCCGCCTACGCATTCACAGCCCTGGATGCCC...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGGTGTGGCCAGAAGGTaGCAGAGCGGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPGVARR*QSGPCR
Trigger: CCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTTGATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRTCQSLPAGARLRGSSLISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...CAAGCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR GCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCGGCGGTGCCTGGCCTaGTGCCTAGGGTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGRRCLA*CLGSRT
Trigger: GGTGCGGGACCCTAGGCAGCAGGCCAGGCACCGCCG...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp ACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCCTCCCGCAGCCGGGTaGCCACCTCCCCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TSSPRSPFPKCPWDLRAWPPAAG*PPPLVP
Trigger: TGGGACCAGGGGAGGTGGGCACCCGGCTGCGGGAGG...CCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGCCAAGACGCCTGCTaGTGTGAAGCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHSQDAC*CEALGQ
Trigger: CTGGCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCT...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACG +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPSSTWA*VPVAYT
Trigger: CGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGA...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCACGCTGCTCAGCAGCTaGTCCATGAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPTLLSS*SMSLPS
Trigger: GGACGGGAGGCTCATGGAGCAGCTGCTGAGCAGCGT...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTCTAGAGGAAGGTGGTCCTGACGCTCCCGTGTGCGGATaGAGGAGGCCTCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: GVGEDPPGSRALEEGGPDAPVCG*RRPPQR
Trigger: ACGCTGTGGAGGCCTCCTGCATCCGCACACGGGAGC...GTCAGGACCACCTTCCTCTAGAGCTCGGGAGCCCGGAGGGTCTTCACCCACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCGCGGCTGGTGACACCTaGTCCTGGTCAGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPAAGDT*SWSAMD
Trigger: GTCCATGGCTGACCAGGAGCAGGTGTCACCAGCCGC...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCAGGGTCCCGCACCCACTaGAGGGGTGGAGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPGSRTH*RGGGSA
Trigger: TGCGGAACCTCCACCCCTCCAGTGGGTGCGGGACCC...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329875.13
CDS-3UTR CCA 90 bp GCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGACAAAGCCCCCACAGATaGCACCGGCTCTGCGGGACG +
Preference number: 4 (lower is better)
Translates to: ALHAGLGMPGPSGPSHTGQSPHR*HRLCGT
Trigger: CGTCCCGCAGAGCCGGTGCCATCTGTGGGGGCTTTG...TCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR CCA 90 bp CCCGTGCCAGCTGATACTGGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGACTGTGGCATACACGGTaGCCCCCTCCCGCACCACGA +
Preference number: 4 (lower is better)
Translates to: PVPADTGVGVGEDPPGSRLWHTR*PPPAPR
Trigger: TCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAG...TCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCAGTATCAGCTGGCACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTGTGGCATACACGGTaGCCCCCTCCCGCACCACGA +
Preference number: 4 (lower is better)
Translates to: PWDLRAWQPRGAVALHAGLWHTR*PPPAPR
Trigger: TCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAG...TCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTCCCGTCCTCCACCTaGGCGTGCGTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPLPSST*ACVPVA
Trigger: TGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAG...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TTGGTGTGGCCAGAAGGTGACAGAGCGGTCCCTGCAGGGGAGTCCAGCTTCACCCTCCCGTCCTCCACCTaGGCGTGCGTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LVWPEGDRAVPAGESSFTLPSST*ACVPVA
Trigger: TGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAG...GGTGAAGCTGGACTCCCCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR CCA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACATGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: VAPPWLCPWLAPALIRATCGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTAGTCCCTCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PALIRATESGPLWGPPSPSILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...GGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCATCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPSILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTGGTCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGAGGAGCAGGAGGTGGTaGCCACAGAAGTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: VVRQDVSILARWGQAAGERSRRW*PQKFTS
Trigger: GCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCT...CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCAAAGCCCCCACAGATaGCACCGGCTCCCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPQSPHR*HRLPQR
Trigger: GCGCTGAGGGAGCCGGTGCCATCTGTGGGGGCTTTG...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGAGACGCCTGCTGCTGTaGAGCCCTTGGCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VALHAGLGMPGPSGPSHTRRLLL*SPWPGQ
Trigger: TTGCCCTGGCCAAGGGCTTCACAGCAGCAGGCGTCT...CGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGTCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCTCACCCCCATCTTCCTaGGAGCAGAAACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: WSGRTCQSLPAGARLRGSSPPSS*EQKLWP
Trigger: TGGCCACAGTTTCTGCTCTCAGGAAGATGGGGGTGA...GCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR TCA 90 bp GGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTTGTCACCCCCATCTTCCTaGGAGCAGAAACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRTCQSLPAGARLRGSSLSPPSS*EQKLWP
Trigger: TGGCCACAGTTTCTGCTCTCAGGAAGATGGGGGTGA...CAAGCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR TCA 90 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTAGTCCCGGTGTGGCCAGAAGGTaGCAGAGCGGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PALIRATESGPLWGPPSPGVARR*QSGPCR
Trigger: CCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACC...GGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: HGICVLGSQEGLWPFTLDGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VALHAGLGMPGPSGPSHTGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...CGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGGGATCCCACCTCTGCTaGGCCTTCACAGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SMGSACLAAKRGCGPSRWGSHLC*AFTEGV
Trigger: GACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCC...CCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGGATCCCACCTCTGCTaGGCCTTCACAGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPGSHLC*AFTEGV
Trigger: GACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTCGGTGCCTGGCCTGCTaGCTAGGGTCCCGCACCCAC +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCRCLAC*LGSRTH
Trigger: GTGGGTGCGGGACCCTAGGCAGCAGGCCAGGCACCG...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGCGGTGCCTGGCCTGCTaGCTAGGGTCCCGCACCCAC +
Preference number: 4 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKRCLAC*LGSRTH
Trigger: GTGGGTGCGGGACCCTAGGCAGCAGGCCAGGCACCG...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTGTCCGGCCCGTTAACTaGTTCGGGGCCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLVRPVN*FGAPSQ
Trigger: CTGACTGGGGGCCCCGAAGCAGTTAACGGGCCGGAC...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTCCTCCCGCAGCCGGGTaGCCACCTCCCCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SPAAQGALSPNVHGICVLPPAAG*PPPLVP
Trigger: TGGGACCAGGGGAGGTGGGCACCCGGCTGCGGGAGG...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTAGATGGCACCGGCTCTaGGGGACGAGACCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPRWHRL*GTRPAG
Trigger: TCCTGCCGGTCTCGTCCCGCAGAGCCGGTGCCATCT...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp CCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAACCACCTGGGCGTGCGTaGCTGTGGCATACACGGTGG +
Preference number: 4 (lower is better)
Translates to: PFTLDLGCLDPLALLTREPPGRA*LWHTRW
Trigger: CCACCGTGTATGCCACAGGCACGCACGCCCAGGTGG...TTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACGGCCCCGAGGCGGACTaGCAGGCGCCTTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VEVGESTPVLGWEALADHGPEAD*QAPWKS
Trigger: GGACTTCCAAGGCGCCTGGCAGTCCGCCTCGGGGCC...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCACTGCAGCTCCCGTGTaGGGATGCAGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTTAAPV*GCRRPP
Trigger: TGGAGGCCTCCTGCATCCGCACACGGGAGCTGCAGT...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCGCGGCTGGTGACACCTaGTCCTGGTCAGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTAAGDT*SWSAMD
Trigger: GTCCATGGCTGACCAGGAGCAGGTGTCACCAGCCGC...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCAGGACGTGTCAATCCTTaGCCGCTGGGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPGRVNP*PLGPGC
Trigger: GCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCC...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCATGGTCAGCCATGGACTaGAGCTCCGTAGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPWSAMD*SSVGGA
Trigger: GGCCCCGCCTACGGAGCTGCAGTCCATGGCTGACCA...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584848.5
CDS-3UTR CCA 90 bp CCCGTGCCAGCTGATACTGGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGACTGTCCGGAGACCCCTaGCCCAAAGCCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: PVPADTGVGVGEDPPGSRLSGDP*PKAPTD
Trigger: ATCTGTGGGGGCTTTGGGCCAGGGGTCTCCGGACAG...TCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCAGTATCAGCTGGCACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTCTGTGGCATACACGGTaGCCCCCTCCCGCACCACGA +
Preference number: 4 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLLWHTR*PPPAPR
Trigger: TCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAG...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTCTGTGGCATACACGGTaGCCCCCTCCCGCACCACGA +
Preference number: 4 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPLWHTR*PPPAPR
Trigger: TCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAG...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCGGGCGTGCGTGCCTGTaGCATACACGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QPKEPFPQMSMGSACLAAGRACL*HTRWPP
Trigger: AGGGGGCCACCGTGTATGCCACAGGCACGCACGCCC...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCCCGTCCTCCACCTaGGCGTGCGTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: AWDPTSAEPSQRGSLTFALPSST*ACVPVA
Trigger: TGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAG...AGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGCTCCCGTCCTCCACCTaGGCGTGCGTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: MSLAGPCADQSHRKWATLLPSST*ACVPVA
Trigger: TGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAG...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGCACATGCAAGGCATaGATGGTGGCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHSTCKA*MVAPPG
Trigger: TCCTGGTGGGGCCACCATCCATGCCTTGCATGTGCT...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CCA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGTCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GALSPNVHGICVLGSQEGSILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCTCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QPKEPFPQMSMGSACLAASILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACGGCCGGGAGGGGGCGTaGGATCCCACCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: EVEVGESTPVLGWEALADGREGA*DPTSAE
Trigger: CTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGAAGGTTTCTCCCTGAATaGAGGGCAGGGAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PWDLRAWQPRGAVALHAGRFLPE*RAGRGR
Trigger: CCGGCCCCTCCCTGCCCTCCATTCAGGGAGAAACCT...TCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTCAAAGCCCCCACAGATaGCACCGGCTCCCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLQSPHR*HRLPQR
Trigger: GCGCTGAGGGAGCCGGTGCCATCTGTGGGGGCTTTG...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAAGACGCCTGCTGCTGTaGAGCCCTTGGCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PFTLDLGCLDPLALLTRERRLLL*SPWPGQ
Trigger: TTGCCCTGGCCAAGGGCTTCACAGCAGCAGGCGTCT...TTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCTGGAGTAGGAGTGGGTaGAGACCCTCCGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QPKEPFPQMSMGSACLAAWSRSG*RPSGLP
Trigger: CGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCA...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGGAGTAGGAGTGGGTaGAGACCCTCCGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGWSRSG*RPSGLP
Trigger: CGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCA...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGAGCCCGTGCCAGCTaGTACTGGAGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CGPSRWTWDAWTLWPFSHGARAS*YWSRSG
Trigger: CCCACTCCTACTCCAGTATCAGCTGGCACGGGCTCC...GTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGAGCCCGTGCCAGCTaGTACTGGAGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PFTLDLGCLDPLALLTREGARAS*YWSRSG
Trigger: CCCACTCCTACTCCAGTATCAGCTGGCACGGGCTCC...TTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp AGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCGGATCCCACCTCTGCTaGGCCTTCACAGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRRWWPQKFTSSPRSPFPGSHLC*AFTEGV
Trigger: GACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCC...GGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTGGAGAGGTTTCTCCCTaGATGGAGGGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLGEVSP*MEGREG
Trigger: CCCCTCCCTGCCCTCCATTCAGGGAGAAACCTCTCC...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCAGGAGAGGTTTCTCCCTaGATGGAGGGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPGEVSP*MEGREG
Trigger: CCCCTCCCTGCCCTCCATTCAGGGAGAAACCTCTCC...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp AGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCGGAGAGGTTTCTCCCTaGATGGAGGGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SRRWWPQKFTSSPRSPFPGEVSP*MEGREG
Trigger: CCCCTCCCTGCCCTCCATTCAGGGAGAAACCTCTCC...GGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGCAGTCAGAGCGGCGGTaGCTGGCCTGCTGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGQSERR*LACCLG
Trigger: CCCTAGGCAGCAGGCCAGGCACCGCCGCTCTGACTG...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp TGTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGCAGCCAAGACGCCTaGTGCTGTGAAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: CGPSRWTWDAWTLWPFSHGSQDA*CCEALG
Trigger: GCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCTGCC...GTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTCCACCTGGGCGTGCGTaGCTGTGGCATACACGGTGG +
Preference number: 4 (lower is better)
Translates to: LCPWLAPALIRATESGPLPPGRA*LWHTRW
Trigger: CCACCGTGTATGCCACAGGCACGCACGCCCAGGTGG...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp AGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACG +
Preference number: 4 (lower is better)
Translates to: SRRWWPQKFTSSPRSPFPSSTWA*VPVAYT
Trigger: CGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGA...GGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCGGCCCCGAGGCGGACTaGCAGGCGCCTTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GWEALADHRDFQWEVMWPGPEAD*QAPWKS
Trigger: GGACTTCCAAGGCGCCTGGCAGTCCGCCTCGGGGCC...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCCCACTCTCCAGCACATaGAAGGCATGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPPLSST*KAWMVA
Trigger: GGCCACCATCCATGCCTTGCATGTGCTGGAGAGTGG...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCGCTCCCGTGTGCGGATaGAGGAGGCCTCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: QPKEPFPQMSMGSACLAAAPVCG*RRPPQR
Trigger: ACGCTGTGGAGGCCTCCTGCATCCGCACACGGGAGC...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTGCGGCTGGTGACACCTaGTCCTGGTCAGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLAAGDT*SWSAMD
Trigger: GTCCATGGCTGACCAGGAGCAGGTGTCACCAGCCGC...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCCGTGCCAGCTGATACTGGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGAACGCTGGACTTGGGATaGCTGGACCCTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PVPADTGVGVGEDPPGSRTLDLG*LDPLAL
Trigger: AAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGT...TCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCAGTATCAGCTGGCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTCCATGGGATCTGCGTaGTTGGCAGCCAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HGICVLGSQEGLWPFTLDSMGSA*LAAKRG
Trigger: GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA...GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGGGAGGGGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGATCCCCTGGTCCCAGCTaGTCTAACTTTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: QGGAGRGRGIPPLLSLHRSPGPS*SNFPLC
Trigger: GCAAAGTGGAAAGTTAGACCAGCTGGGACCAGGGGA...TCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCCCCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR CCA 90 bp CAGGGAGGGGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGCCAGGTCCATGTCTaGGGAGCTAGCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: QGGAGRGRGIPPLLSLHRGQVHV*GASHYL
Trigger: AAGATAATGGCTAGCTCCCCAGACATGGACCTGGCC...TCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCCCCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGGGGCGTGCGTGCCTGTaGCATACACGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQGRACL*HTRWPP
Trigger: AGGGGGCCACCGTGTATGCCACAGGCACGCACGCCC...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGGCGTGCGTGCCTGTaGCATACACGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCGRACL*HTRWPP
Trigger: AGGGGGCCACCGTGTATGCCACAGGCACGCACGCCC...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACGGGCGTGCGTGCCTGTaGCATACACGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: EVEVGESTPVLGWEALADGRACL*HTRWPP
Trigger: AGGGGGCCACCGTGTATGCCACAGGCACGCACGCCC...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCCTCCCGTCCTCCACCTaGGCGTGCGTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTLPSST*ACVPVA
Trigger: TGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAG...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCGGTGACACCTGCTCCTaGTCAGCCATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTGDTCS*SAMDCS
Trigger: GCTGCAGTCCATGGCTGACCAGGAGCAGGTGTCACC...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACTCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EVEVGESTPVLGWEALADSILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCTCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTSILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: AWDPTSAEPSQRGSLTFAPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...AGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGGATGTGGCCCCTCCCTaGCTATGTCCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GALSPNVHGICVLGSQEGDVAPP*LCPWLA
Trigger: GGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATC...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTAGGTTTCTCCCTGAATaGAGGGCAGGGAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLRFLPE*RAGRGR
Trigger: CCGGCCCCTCCCTGCCCTCCATTCAGGGAGAAACCT...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCTGTGGCCCTTCACGCTaGACTTGGGATGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTCGPSR*TWDAWT
Trigger: GGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGAGCCAAGAGGGGCTGTaGCCCTTCACGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: VALHAGLGMPGPSGPSHTSQEGL*PFTLDL
Trigger: CAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCT...CGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGATGGGATCTGCGTGCTTaGCAGCCAAGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PWDLRAWQPRGAVALHAGWDLRA*QPRGAV
Trigger: CACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA...TCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGTGGGATCTGCGTGCTTaGCAGCCAAGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SMGSACLAAKRGCGPSRWWDLRA*QPRGAV
Trigger: CACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA...CCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACGCCTCCCTCCTCATGTaGCAGACAGAAGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHASLLM*QTEVRT
Trigger: TGTCCTGACTTCTGTCTGCCACATGAGGAGGGAGGC...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCAAAGCCCCCACAGATaGCACCGGCTCCCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFQSPHR*HRLPQR
Trigger: GCGCTGAGGGAGCCGGTGCCATCTGTGGGGGCTTTG...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCATCCAGGGCTGTaGATGCGTAGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SVEGLHYSTHSNHPPTQAGHPGL*MRRRGR
Trigger: GCGGCCCCGCCTACGCATTCACAGCCCTGGATGCCC...TGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCGGGCATCCAGGGCTGTaGATGCGTAGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRALSNQLKASTIPPTVTGHPGL*MRRRGR
Trigger: GCGGCCCCGCCTACGCATTCACAGCCCTGGATGCCC...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGGGCATCCAGGGCTGTaGATGCGTAGGCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RKEVEVGESTPVLGWEALGHPGL*MRRRGR
Trigger: GCGGCCCCGCCTACGCATTCACAGCCCTGGATGCCC...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGCCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 4 (lower is better)
Translates to: SMGSACLAAKRGCGPSRWPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...CCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCGGTGTGGCCAGAAGGTaGCAGAGCGGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTGVARR*QSGPCR
Trigger: CCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACC...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VALHAGLGMPGPSGPSHTISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...CGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCGGAGCCCGTGCCAGCTaGTACTGGAGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGGARAS*YWSRSG
Trigger: CCCACTCCTACTCCAGTATCAGCTGGCACGGGCTCC...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGGGAGCCCGTGCCAGCTaGTACTGGAGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GALSPNVHGICVLGSQEGGARAS*YWSRSG
Trigger: CCCACTCCTACTCCAGTATCAGCTGGCACGGGCTCC...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp ACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGGTCCGGCCCGTTAACTaGTTCGGGGCCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: TSSPRSPFPKCPWDLRAWVRPVN*FGAPSQ
Trigger: CTGACTGGGGGCCCCGAAGCAGTTAACGGGCCGGAC...CCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTAGATGGCACCGGCTCTaGGGGACGAGACCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCRWHRL*GTRPAG
Trigger: TCCTGCCGGTCTCGTCCCGCAGAGCCGGTGCCATCT...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR GCA 90 bp GGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTCTAGAGGAAGGTGGTAGCCAAGACGCCTGCTaGTGTGAAGCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GVGVGEDPPGSRALEEGGSQDAC*CEALGQ
Trigger: CTGGCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCT...ACCACCTTCCTCTAGAGCTCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCGGCAGCCAAGACGCCTaGTGCTGTGAAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QPKEPFPQMSMGSACLAAGSQDA*CCEALG
Trigger: GCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCTGCC...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCCCACCTGGGCGTGCGTaGCTGTGGCATACACGGTGG +
Preference number: 4 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALPPGRA*LWHTRW
Trigger: CCACCGTGTATGCCACAGGCACGCACGCCCAGGTGG...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACG +
Preference number: 4 (lower is better)
Translates to: MSLAGPCADQSHRKWATLSSTWA*VPVAYT
Trigger: CGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGA...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACG +
Preference number: 4 (lower is better)
Translates to: LCPWLAPALIRATESGPLSSTWA*VPVAYT
Trigger: CGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGA...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACG +
Preference number: 4 (lower is better)
Translates to: PNVHGICVLGSQEGLWPFSSTWA*VPVAYT
Trigger: CGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGA...GAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTACGCTGCTCAGCAGCTaGTCCATGAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LCPWLAPALIRATESGPLTLLSS*SMSLPS
Trigger: GGACGGGAGGCTCATGGAGCAGCTGCTGAGCAGCGT...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCACTCTCCAGCACATaGAAGGCATGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTPLSST*KAWMVA
Trigger: GGCCACCATCCATGCCTTGCATGTGCTGGAGAGTGG...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGCTCCCGTGTGCGGATaGAGGAGGCCTCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCAPVCG*RRPPQR
Trigger: ACGCTGTGGAGGCCTCCTGCATCCGCACACGGGAGC...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCGCTCCCGTGTGCGGATaGAGGAGGCCTCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGAPVCG*RRPPQR
Trigger: ACGCTGTGGAGGCCTCCTGCATCCGCACACGGGAGC...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTACTGCAGCTCCCGTGTaGGGATGCAGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PKCPWDLRAWQPRGAVALTAAPV*GCRRPP
Trigger: TGGAGGCCTCCTGCATCCGCACACGGGAGCTGCAGT...AAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCACTGCAGCTCCCGTGTaGGGATGCAGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPKEPFPQMSMGSACLAATAAPV*GCRRPP
Trigger: TGGAGGCCTCCTGCATCCGCACACGGGAGCTGCAGT...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCACTGCAGCTCCCGTGTaGGGATGCAGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGTAAPV*GCRRPP
Trigger: TGGAGGCCTCCTGCATCCGCACACGGGAGCTGCAGT...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAATGGTCAGCCATGGACTaGAGCTCCCGTGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: PFTLDLGCLDPLALLTREWSAMD*SSRVRM
Trigger: CATCCGCACACGGGAGCTGCAGTCCATGGCTGACCA...TTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTGCGGCTGGTGACACCTaGTCCTGGTCAGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFAAGDT*SWSAMD
Trigger: GTCCATGGCTGACCAGGAGCAGGTGTCACCAGCCGC...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGGGACGTGTCAATCCTTaGCCGCTGGGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGGRVNP*PLGPGC
Trigger: GCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCC...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCGGACGTGTCAATCCTTaGCCGCTGGGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGGRVNP*PLGPGC
Trigger: GCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCC...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGACGTGTCAATCCTTaGCCGCTGGGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCGRVNP*PLGPGC
Trigger: GCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCC...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACTCCATGGGATCTGCGTaGTTGGCAGCCAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CGPSRWTWDAWTLWPFSHSMGSA*LAAKRG
Trigger: GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA...GTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCACACCCCGCCCAGAACTaGGCTACCGTCGCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SVEGLHYSTHSNHPPTQAHPAQN*ATVAPH
Trigger: GTGGGGCGCGACGGTAGCCCAGTTCTGGGCGGGGTG...TGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR CCA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCCTGTCCGGAGACCCCTaGCCCAAAGCCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGLSGDP*PKAPTD
Trigger: ATCTGTGGGGGCTTTGGGCCAGGGGTCTCCGGACAG...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCGACTGCCAGGCGCCTTaGAAGTCCCATCTTCACACC +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTDCQAP*KSHLHT
Trigger: GGTGTGAAGATGGGACTTCCAAGGCGCCTGGCAGTC...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTCTAGAGGAAGGTGGTGGTGACACCTGCTCCTaGTCAGCCATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVGVGEDPPGSRALEEGGGDTCS*SAMDCS
Trigger: GCTGCAGTCCATGGCTGACCAGGAGCAGGTGTCACC...ACCACCTTCCTCTAGAGCTCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCATGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPCGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGTCAATCCTTGCCCGCTaGGGCCAGGCTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: WPQKFTSSPRSPFPKCPWSILAR*GQAAGE
Trigger: CTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGA...CCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCGTGGTGGCAGGATGGTaGTCAGGCAGGACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTVVAGW*SGRTCQ
Trigger: TTGACACGTCCTGCCTGACCACCATCCTGCCACCAC...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGAGTGGTGGCAGGATGGTaGTCAGGCAGGACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: PWDLRAWQPRGAVALHAGVVAGW*SGRTCQ
Trigger: TTGACACGTCCTGCCTGACCACCATCCTGCCACCAC...TCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCAAGGTGGTGGCAGGATaGTGGTCAGGCAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTKVVAG*WSGRTC
Trigger: ACACGTCCTGCCTGACCACCATCCTGCCACCACCTT...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: EVEVGESTPVLGWEALADPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCGATGTGGCCCCTCCCTaGCTATGTCCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTDVAPP*LCPWLA
Trigger: GGCCAGCCAGGGACATAGCCAGGGAGGGGCCACATC...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTTGGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRTCQSLPAGARLRGSSLGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...CAAGCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR CCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGGCCGGGAGGGGGCGTaGGATCCCACCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RKEVEVGESTPVLGWEALGREGA*DPTSAE
Trigger: CTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGCCGGGAGGGGGCGTaGGATCCCACCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SVEGLHYSTHSNHPPTQAGREGA*DPTSAE
Trigger: CTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC...TGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTGGACTTGGGATGCCTaGACCCTCTGGCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HGICVLGSQEGLWPFTLDWTWDA*TLWPFS
Trigger: TGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCA...GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACCTTCACGCTGGACTTaGGATGCCTGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPPSRWT*DAWTLW
Trigger: CCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGG...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGAGCCAAGAGGGGCTGTaGCCCTTCACGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: LHAGLGMPGPSGPSHTGRSQEGL*PFTLDL
Trigger: CAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCT...CCTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTAGTCCCTGGGATCTGCGTGCTTaGCAGCCAAGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PALIRATESGPLWGPPSPWDLRA*QPRGAV
Trigger: CACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA...GGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGAGGAGCAGGAGGTGGTaGCCACAGAAGTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: SMGSACLAAKRGCGPSRWRSRRW*PQKFTS
Trigger: GCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCT...CCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGAGTGCAGCAGCATCTTaGCAGCCCCGTAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQSAAAS*QPRRRG
Trigger: GCCCCGCCTACGGGGCTGCCAAGATGCTGCTGCACT...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403172.8
CDS-3UTR TCA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCAGACGCCTGCTGCTGTaGAGCCCTTGGCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTRRLLL*SPWPGQ
Trigger: TTGCCCTGGCCAAGGGCTTCACAGCAGCAGGCGTCT...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTAGACGCCTGCTGCTGTaGAGCCCTTGGCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCRRLLL*SPWPGQ
Trigger: TTGCCCTGGCCAAGGGCTTCACAGCAGCAGGCGTCT...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCTCACCCCCATCTTCCTaGGAGCAGAAACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTSPPSS*EQKLWP
Trigger: TGGCCACAGTTTCTGCTCTCAGGAAGATGGGGGTGA...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCGGTGTGGCCAGAAGGTaGCAGAGCGGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GWEALADHRDFQWEVMWPGVARR*QSGPCR
Trigger: CCTGCAGGGACCGCTCTGTCACCTTCTGGCCACACC...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTAGTCCCATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PALIRATESGPLWGPPSPISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...GGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGATCCCACCTCTGCTaGGCCTTCACAGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCGSHLC*AFTEGV
Trigger: GACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCC...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGGGAGAGGTTTCTCCCTaGATGGAGGGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKGEVSP*MEGREG
Trigger: CCCCTCCCTGCCCTCCATTCAGGGAGAAACCTCTCC...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAGCCAAGACGCCTGCTaGTGTGAAGCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QPKEPFPQMSMGSACLAASQDAC*CEALGQ
Trigger: CTGGCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCT...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTAGCCAAGACGCCTGCTaGTGTGAAGCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LCPWLAPALIRATESGPLSQDAC*CEALGQ
Trigger: CTGGCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCT...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGGGCAGCCAAGACGCCTaGTGCTGTGAAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKGSQDA*CCEALG
Trigger: GCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCTGCC...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACGGCAGCCAAGACGCCTaGTGCTGTGAAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EVEVGESTPVLGWEALADGSQDA*CCEALG
Trigger: GCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCTGCC...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAAAGAGCACATCACTGTaGTGCACCGTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VAPPWLCPWLAPALIRATKSTSL*CTVSLL
Trigger: CAACAAGGAGACGGTGCAGCACAGTGATGTGCTCTT...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGACCACCTGGGCGTGCGTaGCTGTGGCATACACGGTGG +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGPPGRA*LWHTRW
Trigger: CCACCGTGTATGCCACAGGCACGCACGCCCAGGTGG...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGACGCTGCTCAGCAGCTaGTCCATGAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKTLLSS*SMSLPS
Trigger: GGACGGGAGGCTCATGGAGCAGCTGCTGAGCAGCGT...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTTTGAGCTGGCCTGGGTaGTGTTCTGAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLLSWPG*CSECSS
Trigger: GCTGCTGCACTCAGAACAGCACCCAGGCCAGCTCAA...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGCCACTCTCCAGCACATaGAAGGCATGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LHAGLGMPGPSGPSHTGRPLSST*KAWMVA
Trigger: GGCCACCATCCATGCCTTGCATGTGCTGGAGAGTGG...CCTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCACTGCAGCTCCCGTGTaGGGATGCAGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGTAAPV*GCRRPP
Trigger: TGGAGGCCTCCTGCATCCGCACACGGGAGCTGCAGT...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGTCAGCCATGGACTaGAGCTCCCGTGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: LCPWLAPALIRATESGPLWSAMD*SSRVRM
Trigger: CATCCGCACACGGGAGCTGCAGTCCATGGCTGACCA...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp CCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTTGGTCAGCCATGGACTaGAGCTCCCGTGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: PKCPWDLRAWQPRGAVALWSAMD*SSRVRM
Trigger: CATCCGCACACGGGAGCTGCAGTCCATGGCTGACCA...AAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCGGACGTGTCAATCCTTaGCCGCTGGGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GWEALADHRDFQWEVMWPGRVNP*PLGPGC
Trigger: GCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCC...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGACGTGTCAATCCTTaGCCGCTGGGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLKASTIPPTVTTLPHRQGRVNP*PLGPGC
Trigger: GCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCC...CTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTGGGGTCCTTGACCTTTaGTCTCAGGAAGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLGVLDL*SQEGAR
Trigger: ACGGGCTCCTTCCTGAGAGCAAAGGTCAAGGACCCC...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GAGGTCAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCGGGGTCCTTGACCTTTaGTCTCAGGAAGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: EVRSRRWWPQKFTSSPRSGVLDL*SQEGAR
Trigger: ACGGGCTCCTTCCTGAGAGCAAAGGTCAAGGACCCC...GCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCACGCTGGACTTGGGATaGCTGGACCCTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: AAQGALSPNVHGICVLGSTLDLG*LDPLAL
Trigger: AAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGT...GCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTACGCTGGACTTGGGATaGCTGGACCCTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PKCPWDLRAWQPRGAVALTLDLG*LDPLAL
Trigger: AAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGT...AAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCTGTCCGGAGACCCCTaGCCCAAAGCCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGLSGDP*PKAPTD
Trigger: ATCTGTGGGGGCTTTGGGCCAGGGGTCTCCGGACAG...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGGGCGTGCGTGCCTGTaGCATACACGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LGWEALADHRDFQWEVMWGRACL*HTRWPP
Trigger: AGGGGGCCACCGTGTATGCCACAGGCACGCACGCCC...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTCTCCCGTCCTCCACCTaGGCGTGCGTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RKEVEVGESTPVLGWEALLPSST*ACVPVA
Trigger: TGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAG...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCACTCCCGTCCTCCACCTaGGCGTGCGTGCCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SVEGLHYSTHSNHPPTQALPSST*ACVPVA
Trigger: TGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAG...TGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTGACTGCCAGGCGCCTTaGAAGTCCCATCTTCACACC +
Preference number: 4 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPDCQAP*KSHLHT
Trigger: GGTGTGAAGATGGGACTTCCAAGGCGCCTGGCAGTC...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTAGTCCCGACTGCCAGGCGCCTTaGAAGTCCCATCTTCACACC +
Preference number: 4 (lower is better)
Translates to: PALIRATESGPLWGPPSPDCQAP*KSHLHT
Trigger: GGTGTGAAGATGGGACTTCCAAGGCGCCTGGCAGTC...GGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGAGCACATGCAAGGCATaGATGGTGGCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LHAGLGMPGPSGPSHTGRSTCKA*MVAPPG
Trigger: TCCTGGTGGGGCCACCATCCATGCCTTGCATGTGCT...CCTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CCA 90 bp GCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTGGTGACACCTGCTCCTaGTCAGCCATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: AWDPTSAEPSQRGSLTFAGDTCS*SAMDCS
Trigger: GCTGCAGTCCATGGCTGACCAGGAGCAGGTGTCACC...AGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: LCPWLAPALIRATESGPLCGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTCTAGAGGAAGGTGGTGTGGTGGCAGGATGGTaGTCAGGCAGGACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GVGVGEDPPGSRALEEGGVVAGW*SGRTCQ
Trigger: TTGACACGTCCTGCCTGACCACCATCCTGCCACCAC...ACCACCTTCCTCTAGAGCTCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GAGGTCAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCGTGGTGGCAGGATGGTaGTCAGGCAGGACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: EVRSRRWWPQKFTSSPRSVVAGW*SGRTCQ
Trigger: TTGACACGTCCTGCCTGACCACCATCCTGCCACCAC...GCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTAGTCCCAAGGTGGTGGCAGGATaGTGGTCAGGCAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: PALIRATESGPLWGPPSPKVVAG*WSGRTC
Trigger: ACACGTCCTGCCTGACCACCATCCTGCCACCACCTT...GGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GALSPNVHGICVLGSQEGESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGACCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCAATCCACCCCTGTTCTaGGCTGGGAAGCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTNPPLF*AGKHLQ
Trigger: CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATT...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCAGGTTTCTCCCTGAATaGAGGGCAGGGAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALRFLPE*RAGRGR
Trigger: CCGGCCCCTCCCTGCCCTCCATTCAGGGAGAAACCT...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCTGTGGCCCTTCACGCTaGACTTGGGATGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: AAQGALSPNVHGICVLGSCGPSR*TWDAWT
Trigger: GGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA...GCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGAGCCAAGAGGGGCTGTaGCCCTTCACGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GALSPNVHGICVLGSQEGSQEGL*PFTLDL
Trigger: CAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCT...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCAGCCAAGAGGGGCTGTaGCCCTTCACGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGSQEGL*PFTLDL
Trigger: CAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCT...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGAGGAGCAGGAGGTGGTaGCCACAGAAGTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: LHAGLGMPGPSGPSHTGRRSRRW*PQKFTS
Trigger: GCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCT...CCTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACAGGAGCAGGAGGTGGTaGCCACAGAAGTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: CGPSRWTWDAWTLWPFSHRSRRW*PQKFTS
Trigger: GCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCT...GTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGGCCTCCCTCCTCATGTaGCAGACAGAAGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: SMGSACLAAKRGCGPSRWASLLM*QTEVRT
Trigger: TGTCCTGACTTCTGTCTGCCACATGAGGAGGGAGGC...CCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACGCCTCCCTCCTCATGTaGCAGACAGAAGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: HGICVLGSQEGLWPFTLDASLLM*QTEVRT
Trigger: TGTCCTGACTTCTGTCTGCCACATGAGGAGGGAGGC...GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGCCTCCCTCCTCATGTaGCAGACAGAAGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPASLLM*QTEVRT
Trigger: TGTCCTGACTTCTGTCTGCCACATGAGGAGGGAGGC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCAAAGCCCCCACAGATaGCACCGGCTCGTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: LGWEALADHRDFQWEVMWQSPHR*HRLVAP
Trigger: GGGCGCGACGAGCCGGTGCCATCTGTGGGGGCTTTG...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402252.6
CDS-3UTR TCA 90 bp CCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAATCACCCCCATCTTCCTaGGAGCAGAAACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PFTLDLGCLDPLALLTRESPPSS*EQKLWP
Trigger: TGGCCACAGTTTCTGCTCTCAGGAAGATGGGGGTGA...TTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGGGCTGGCCGAAACGCTaGCAGCTTCTTCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: LHAGLGMPGPSGPSHTGRGWPKR*QLLLNG
Trigger: TCCATTGAGAAGAAGCTGTCAGCGTTTCGGCCAGCC...CCTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCAGGCTGGCCGAAACGCTaGCAGCTTCTTCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPGWPKR*QLLLNG
Trigger: TCCATTGAGAAGAAGCTGTCAGCGTTTCGGCCAGCC...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTGGCTGGCCGAAACGCTaGCAGCTTCTTCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPGWPKR*QLLLNG
Trigger: TCCATTGAGAAGAAGCTGTCAGCGTTTCGGCCAGCC...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCCCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 4 (lower is better)
Translates to: PNVHGICVLGSQEGLWPFPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...GAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGCCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 4 (lower is better)
Translates to: MSLAGPCADQSHRKWATLPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SPAAQGALSPNVHGICVLGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCTGGAGTAGGAGTGGGTaGAGACCCTCCGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GRALSNQLKASTIPPTVTWSRSG*RPSGLP
Trigger: CGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCA...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGAGCCCGTGCCAGCTaGTACTGGAGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VATEVHQQPKEPFPQMSMGARAS*YWSRSG
Trigger: CCCACTCCTACTCCAGTATCAGCTGGCACGGGCTCC...CATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCAGCCAAGACGCCTGCTaGTGTGAAGCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGSQDAC*CEALGQ
Trigger: CTGGCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCT...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGAGCCAAGACGCCTGCTaGTGTGAAGCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGSQDAC*CEALGQ
Trigger: CTGGCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCT...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGAGGCAGCCAAGACGCCTaGTGCTGTGAAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGGSQDA*CCEALG
Trigger: GCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCTGCC...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCAAGAGCACATCACTGTaGTGCACCGTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPKSTSL*CTVSLL
Trigger: CAACAAGGAGACGGTGCAGCACAGTGATGTGCTCTT...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCCCACCTGGGCGTGCGTaGCTGTGGCATACACGGTGG +
Preference number: 4 (lower is better)
Translates to: HRSSPAAQGALSPNVHGIPPGRA*LWHTRW
Trigger: CCACCGTGTATGCCACAGGCACGCACGCCCAGGTGG...GATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACG +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGSSTWA*VPVAYT
Trigger: CGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGA...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACG +
Preference number: 4 (lower is better)
Translates to: VATEVHQQPKEPFPQMSMSSTWA*VPVAYT
Trigger: CGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGA...CATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCACGCTGCTCAGCAGCTaGTCCATGAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: GWEALADHRDFQWEVMWPTLLSS*SMSLPS
Trigger: GGACGGGAGGCTCATGGAGCAGCTGCTGAGCAGCGT...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCGCTCCCGTGTGCGGATaGAGGAGGCCTCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLAPVCG*RRPPQR
Trigger: ACGCTGTGGAGGCCTCCTGCATCCGCACACGGGAGC...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGAGCGGCTGGTGACACCTaGTCCTGGTCAGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGAAGDT*SWSAMD
Trigger: GTCCATGGCTGACCAGGAGCAGGTGTCACCAGCCGC...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: LAGPCADQSHRKWATLGTGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp ACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGACGCTGGACTTGGGATaGCTGGACCCTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: TSSPRSPFPKCPWDLRAWTLDLG*LDPLAL
Trigger: AAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGT...CCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACGCTGGACTTGGGATaGCTGGACCCTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQTLDLG*LDPLAL
Trigger: AAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGT...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCTGGTCAGCCATGGACTaGAGCTCCCAGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GLGSTCRPQRFPVGSDVAWSAMD*SSQEGL
Trigger: CAGGCCCTCCTGGGAGCTGCAGTCCATGGCTGACCA...GGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577756.5
ENST00000629768.2
CDS-3UTR CCA 90 bp CTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAGGCACCCACTGGAGGGGTaGAGGTTCCGCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LHAGLGMPGPSGPSHTGRHPLEG*RFRRRN
Trigger: ATTTCTTCTGCGGAACCTCCACCCCTCCAGTGGGTG...CCTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR CCA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGGCCAGGTCCATGTCTaGGGAGCTAGCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: WLAPALIRATESGPLWGPGQVHV*GASHYL
Trigger: AAGATAATGGCTAGCTCCCCAGACATGGACCTGGCC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGGACTGCCAGGCGCCTTaGAAGTCCCATCTTCACACC +
Preference number: 4 (lower is better)
Translates to: GALSPNVHGICVLGSQEGDCQAP*KSHLHT
Trigger: GGTGTGAAGATGGGACTTCCAAGGCGCCTGGCAGTC...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGGGTGACACCTGCTCCTaGTCAGCCATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGGDTCS*SAMDCS
Trigger: GCTGCAGTCCATGGCTGACCAGGAGCAGGTGTCACC...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGGTGGTGGCAGGATGGTaGTCAGGCAGGACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GALSPNVHGICVLGSQEGVVAGW*SGRTCQ
Trigger: TTGACACGTCCTGCCTGACCACCATCCTGCCACCAC...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGTGGTGGCAGGATGGTaGTCAGGCAGGACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: MSLAGPCADQSHRKWATLVVAGW*SGRTCQ
Trigger: TTGACACGTCCTGCCTGACCACCATCCTGCCACCAC...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCCCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTAGTCCCAATCCACCCCTGTTCTaGGCTGGGAAGCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: PALIRATESGPLWGPPSPNPPLF*AGKHLQ
Trigger: CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATT...GGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VAPPWLCPWLAPALIRATKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCGATGCCTGGACCCTCTaGCCCTTCTCACACGGGAAG +
Preference number: 4 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTDAWTL*PFSHGK
Trigger: CTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATC...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGCCTTCACGCTGGACTTaGGATGCCTGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGPSRWT*DAWTLW
Trigger: CCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGG...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTCCTTCACGCTGGACTTaGGATGCCTGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCPSRWT*DAWTLW
Trigger: CCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGG...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGCCTTCACGCTGGACTTaGGATGCCTGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQPSRWT*DAWTLW
Trigger: CCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGG...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGTGTGGCCCTTCACGCTaGACTTGGGATGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGCGPSR*TWDAWT
Trigger: GGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGATTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALHAGLGMPGPSGPSHTGFPKCP*DLRAWQ
Trigger: CTGCCAAGCACGCAGATCCCATGGACATTTGGGGAA...TCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAGGAGCAGGAGGTGGTaGCCACAGAAGTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: QPKEPFPQMSMGSACLAARSRRW*PQKFTS
Trigger: GCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCT...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTGGCTGGCCGAAACGCTaGCAGCTTCTTCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: AWDPTSAEPSQRGSLTFAGWPKR*QLLLNG
Trigger: TCCATTGAGAAGAAGCTGTCAGCGTTTCGGCCAGCC...AGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGCTGGCCGAAACGCTaGCAGCTTCTTCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: MSLAGPCADQSHRKWATLGWPKR*QLLLNG
Trigger: TCCATTGAGAAGAAGCTGTCAGCGTTTCGGCCAGCC...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCGGCTGGCCGAAACGCTaGCAGCTTCTTCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: PNVHGICVLGSQEGLWPFGWPKR*QLLLNG
Trigger: TCCATTGAGAAGAAGCTGTCAGCGTTTCGGCCAGCC...GAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LCPWLAPALIRATESGPLRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCAGCCAAGACGCCTGCTaGTGTGAAGCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLGSTCRPQRFPVGSDVASQDAC*CEALGQ
Trigger: CTGGCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCT...GGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCGGCAGCCAAGACGCCTaGTGCTGTGAAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GRALSNQLKASTIPPTVTGSQDA*CCEALG
Trigger: GCCAAGGGCTTCACAGCAGCAGGCGTCTTGGCTGCC...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTCTAGAGGAAGGTGGTCCTGACAAGAGCACATCACTGTaGTGCACCGTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GVGEDPPGSRALEEGGPDKSTSL*CTVSLL
Trigger: CAACAAGGAGACGGTGCAGCACAGTGATGTGCTCTT...GTCAGGACCACCTTCCTCTAGAGCTCGGGAGCCCGGAGGGTCTTCACCCACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGCCACCTGGGCGTGCGTaGCTGTGGCATACACGGTGG +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVPPGRA*LWHTRW
Trigger: CCACCGTGTATGCCACAGGCACGCACGCCCAGGTGG...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCACGCTGCTCAGCAGCTaGTCCATGAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLTLLSS*SMSLPS
Trigger: GGACGGGAGGCTCATGGAGCAGCTGCTGAGCAGCGT...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGCCACTCTCCAGCACATaGAAGGCATGGATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGPLSST*KAWMVA
Trigger: GGCCACCATCCATGCCTTGCATGTGCTGGAGAGTGG...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp GGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATTGGTCAGCCATGGACTaGAGCTCCCGTGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: GGHRSSPAAQGALSPNVHWSAMD*SSRVRM
Trigger: CATCCGCACACGGGAGCTGCAGTCCATGGCTGACCA...ATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCGCGGCTGGTGACACCTaGTCCTGGTCAGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLAAGDT*SWSAMD
Trigger: GTCCATGGCTGACCAGGAGCAGGTGTCACCAGCCGC...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGCGGCTGGTGACACCTaGTCCTGGTCAGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LGWEALADHRDFQWEVMWAAGDT*SWSAMD
Trigger: GTCCATGGCTGACCAGGAGCAGGTGTCACCAGCCGC...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp AGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: SRRWWPQKFTSSPRSPFPGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...GGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTAGTCCCGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: PALIRATESGPLWGPPSPGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...GGGACTAGGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGTCCATGGGATCTGCGTaGTTGGCAGCCAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VATEVHQQPKEPFPQMSMSMGSA*LAAKRG
Trigger: GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA...CATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCCATGGGATCTGCGTaGTTGGCAGCCAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGSMGSA*LAAKRG
Trigger: GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTTCCATGGGATCTGCGTaGTTGGCAGCCAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SPAAQGALSPNVHGICVLSMGSA*LAAKRG
Trigger: GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTCTGTCCGGAGACCCCTaGCCCAAAGCCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: RKEVEVGESTPVLGWEALLSGDP*PKAPTD
Trigger: ATCTGTGGGGGCTTTGGGCCAGGGGTCTCCGGACAG...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGCTGTGGCATACACGGTaGCCCCCTCCCGCACCACGA +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVLWHTR*PPPAPR
Trigger: TCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAG...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGAGCACATGCAAGGCATaGATGGTGGCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGSTCKA*MVAPPG
Trigger: TCCTGGTGGGGCCACCATCCATGCCTTGCATGTGCT...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CCA 90 bp CAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGTGACACCTGCTCCTaGTCAGCCATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: QLKASTIPPTVTTLPHRQGDTCS*SAMDCS
Trigger: GCTGCAGTCCATGGCTGACCAGGAGCAGGTGTCACC...CTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCGGTGACACCTGCTCCTaGTCAGCCATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GWEALADHRDFQWEVMWPGDTCS*SAMDCS
Trigger: GCTGCAGTCCATGGCTGACCAGGAGCAGGTGTCACC...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCTGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GLGSTCRPQRFPVGSDVACGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...GGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTTGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SPAAQGALSPNVHGICVLCGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGAAGGTGGTGGCAGGATaGTGGTCAGGCAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGKVVAG*WSGRTC
Trigger: ACACGTCCTGCCTGACCACCATCCTGCCACCACCTT...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACAAGGTGGTGGCAGGATaGTGGTCAGGCAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: VEVGESTPVLGWEALADHKVVAG*WSGRTC
Trigger: ACACGTCCTGCCTGACCACCATCCTGCCACCACCTT...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GLGSTCRPQRFPVGSDVAESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...GGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCGAAAGTGGGCCACTTTaGGGACCCCCTAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GWEALADHRDFQWEVMWPESGPL*GPPSPP
Trigger: AGGGGGACTAGGGGGTCCCCAAAGTGGCCCACTTTC...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGCCCTGGCTATGTCCCTaGCTGGCCCCTGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVPWLCP*LAPALI
Trigger: GATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGG...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: ALHAGLGMPGPSGPSHTGGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...TCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: AGPCADQSHRKWATLGTPKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGATGCCTGGACCCTCTaGCCCTTCTCACACGGGAAG +
Preference number: 4 (lower is better)
Translates to: VATEVHQQPKEPFPQMSMDAWTL*PFSHGK
Trigger: CTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATC...CATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGATGCCTGGACCCTCTaGCCCTTCTCACACGGGAAG +
Preference number: 4 (lower is better)
Translates to: SPAAQGALSPNVHGICVLDAWTL*PFSHGK
Trigger: CTTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATC...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp ACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGTGGACTTGGGATGCCTaGACCCTCTGGCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TSSPRSPFPKCPWDLRAWWTWDA*TLWPFS
Trigger: TGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCA...CCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGTGGACTTGGGATGCCTaGACCCTCTGGCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGWTWDA*TLWPFS
Trigger: TGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCA...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTTGGACTTGGGATGCCTaGACCCTCTGGCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCWTWDA*TLWPFS
Trigger: TGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCA...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCTGGACTTGGGATGCCTaGACCCTCTGGCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALWTWDA*TLWPFS
Trigger: TGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCA...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGTGTGGCCCTTCACGCTaGACTTGGGATGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: QLKASTIPPTVTTLPHRQCGPSR*TWDAWT
Trigger: GGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA...CTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAATTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PFTLDLGCLDPLALLTREFPKCP*DLRAWQ
Trigger: CTGCCAAGCACGCAGATCCCATGGACATTTGGGGAA...TTCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACGGCTGGCCGAAACGCTaGCAGCTTCTTCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: VEVGESTPVLGWEALADHGWPKR*QLLLNG
Trigger: TCCATTGAGAAGAAGCTGTCAGCGTTTCGGCCAGCC...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGACCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGCTGGCCCCTGCGCTaGTCAGAGCCACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVGWPLR*SEPQKV
Trigger: CACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCC...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VEVGESTPVLGWEALADHRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTAAGAGCACATCACTGTaGTGCACCGTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPKSTSL*CTVSLL
Trigger: CAACAAGGAGACGGTGCAGCACAGTGATGTGCTCTT...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTTTGAGCTGGCCTGGGTaGTGTTCTGAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPAAQGALSPNVHGICVLLSWPG*CSECSS
Trigger: GCTGCTGCACTCAGAACAGCACCCAGGCCAGCTCAA...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATTGAGCTGGCCTGGGTaGTGTTCTGAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGLSWPG*CSECSS
Trigger: GCTGCTGCACTCAGAACAGCACCCAGGCCAGCTCAA...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CCA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGCACCCACTGGAGGGGTaGAGGTTCCGCAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKHPLEG*RFRRRN
Trigger: ATTTCTTCTGCGGAACCTCCACCCCTCCAGTGGGTG...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR CCA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTGGCCAGGTCCATGTCTaGGGAGCTAGCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: LCPWLAPALIRATESGPLGQVHV*GASHYL
Trigger: AAGATAATGGCTAGCTCCCCAGACATGGACCTGGCC...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGACTGCCAGGCGCCTTaGAAGTCCCATCTTCACACC +
Preference number: 4 (lower is better)
Translates to: WPQKFTSSPRSPFPKCPWDCQAP*KSHLHT
Trigger: GGTGTGAAGATGGGACTTCCAAGGCGCCTGGCAGTC...CCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATAGCACATGCAAGGCATaGATGGTGGCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GGHRSSPAAQGALSPNVHSTCKA*MVAPPG
Trigger: TCCTGGTGGGGCCACCATCCATGCCTTGCATGTGCT...ATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCGGTGACACCTGCTCCTaGTCAGCCATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLGDTCS*SAMDCS
Trigger: GCTGCAGTCCATGGCTGACCAGGAGCAGGTGTCACC...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCTGCGGGGGAGCAGCTTaGTGTGGCCAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLCGGAA*CGQKVT
Trigger: TGTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCA...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGAATCCACCCCTGTTCTaGGCTGGGAAGCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGNPPLF*AGKHLQ
Trigger: CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATT...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGAATCCACCCCTGTTCTaGGCTGGGAAGCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQNPPLF*AGKHLQ
Trigger: CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATT...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp ACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGAATCCACCCCTGTTCTaGGCTGGGAAGCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: TSSPRSPFPKCPWDLRAWNPPLF*AGKHLQ
Trigger: CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATT...CCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCAGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: WLCPWLAPALIRATESGPGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VALHAGLGMPGPSGPSHTKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...CGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALHAGLGMPGPSGPSHTGKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...TCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTTGTGGCCCTTCACGCTaGACTTGGGATGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: RKEVEVGESTPVLGWEALCGPSR*TWDAWT
Trigger: GGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGGGATCTGCGTGCTTaGCAGCCAAGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRSSPAAQGALSPNVHGIWDLRA*QPRGAV
Trigger: CACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA...GATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGTGGGATCTGCGTGCTTaGCAGCCAAGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LGWEALADHRDFQWEVMWWDLRA*QPRGAV
Trigger: CACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCCCAGGATGGTCTTCTTaGTGGCGGCTGGTGACACCT +
Preference number: 4 (lower is better)
Translates to: GRALSNQLKASTIPPTVTPGWSS*WRLVTP
Trigger: AGGTGTCACCAGCCGCCATCAAGAAGACCATCCTGG...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRALSNQLKASTIPPTVTISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPAAQGALSPNVHGICVLRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...AAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCTTGAGCTGGCCTGGGTaGTGTTCTGAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLLSWPG*CSECSS
Trigger: GCTGCTGCACTCAGAACAGCACCCAGGCCAGCTCAA...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR GCA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: EVEVGESTPVLGWEALADGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: VEVGESTPVLGWEALADHGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGGGGTCCTTGACCTTTaGTCTCAGGAAGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LGWEALADHRDFQWEVMWGVLDL*SQEGAR
Trigger: ACGGGCTCCTTCCTGAGAGCAAAGGTCAAGGACCCC...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCTCCCCTGGTCCCAGCTaGTCTAACTTTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALSPGPS*SNFPLC
Trigger: GCAAAGTGGAAAGTTAGACCAGCTGGGACCAGGGGA...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329875.13
CDS-3UTR CCA 90 bp GGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGGGCCAGGTCCATGTCTaGGGAGCTAGCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: GHRSSPAAQGALSPNVHGGQVHV*GASHYL
Trigger: AAGATAATGGCTAGCTCCCCAGACATGGACCTGGCC...CCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCGGCCAGGTCCATGTCTaGGGAGCTAGCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTGQVHV*GASHYL
Trigger: AAGATAATGGCTAGCTCCCCAGACATGGACCTGGCC...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGACTGCCAGGCGCCTTaGAAGTCCCATCTTCACACC +
Preference number: 4 (lower is better)
Translates to: LGWEALADHRDFQWEVMWDCQAP*KSHLHT
Trigger: GGTGTGAAGATGGGACTTCCAAGGCGCCTGGCAGTC...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCAGCACATGCAAGGCATaGATGGTGGCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLSTCKA*MVAPPG
Trigger: TCCTGGTGGGGCCACCATCCATGCCTTGCATGTGCT...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGTGACACCTGCTCCTaGTCAGCCATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVGDTCS*SAMDCS
Trigger: GCTGCAGTCCATGGCTGACCAGGAGCAGGTGTCACC...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGTGGTGGCAGGATGGTaGTCAGGCAGGACGTGTCAA +
Preference number: 4 (lower is better)
Translates to: RKEVEVGESTPVLGWEALVVAGW*SGRTCQ
Trigger: TTGACACGTCCTGCCTGACCACCATCCTGCCACCAC...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGAATCCACCCCTGTTCTaGGCTGGGAAGCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: QLKASTIPPTVTTLPHRQNPPLF*AGKHLQ
Trigger: CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATT...CTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGAGCCAAGAGGGGCTGTaGCCCTTCACGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVSQEGL*PFTLDL
Trigger: CAAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCT...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCTTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGFPKCP*DLRAWQ
Trigger: CTGCCAAGCACGCAGATCCCATGGACATTTGGGGAA...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGTTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKFPKCP*DLRAWQ
Trigger: CTGCCAAGCACGCAGATCCCATGGACATTTGGGGAA...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCCAGAAGTCAGGACACTaGGGGCTGGAAACCAACTTA +
Preference number: 4 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGQKSGH*GLETNL
Trigger: TAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTG...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGCTCTAGAGGAAGGTaGTCCTTGTCCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKSSRGR*SLSRMV
Trigger: GACCATCCTGGACAAGGACCACCTTCCTCTAGAGCT...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337943.9
CDS-3UTR TCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCTCACCCCCATCTTCCTaGGAGCAGAAACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRALSNQLKASTIPPTVTSPPSS*EQKLWP
Trigger: TGGCCACAGTTTCTGCTCTCAGGAAGATGGGGGTGA...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCTCACCCCCATCTTCCTaGGAGCAGAAACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLSPPSS*EQKLWP
Trigger: TGGCCACAGTTTCTGCTCTCAGGAAGATGGGGGTGA...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp CACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTCACCCCCATCTTCCTaGGAGCAGAAACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HRSSPAAQGALSPNVHGISPPSS*EQKLWP
Trigger: TGGCCACAGTTTCTGCTCTCAGGAAGATGGGGGTGA...GATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRALSNQLKASTIPPTVTRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTTGACCTTTGCTCTCAAGAGCACATCACTGTaGTGCACCGTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WDPTSAEPSQRGSLTFALKSTSL*CTVSLL
Trigger: CAACAAGGAGACGGTGCAGCACAGTGATGTGCTCTT...GAGAGCAAAGGTCAAGGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATAGCACCCCAAAGCCCCCACAGATaGCACCGGCTCTGCGGGACG +
Preference number: 4 (lower is better)
Translates to: GWKPTYKTERARTELIAPQSPHR*HRLCGT
Trigger: CGTCCCGCAGAGCCGGTGCCATCTGTGGGGGCTTTG...GGGTGCTATCAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR CCA 90 bp GGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGCCAGGTCCATGTCTaGGGAGCTAGCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: GGHRSSPAAQGALSPNVHGQVHV*GASHYL
Trigger: AAGATAATGGCTAGCTCCCCAGACATGGACCTGGCC...ATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCAATCCACCCCTGTTCTaGGCTGGGAAGCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLNPPLF*AGKHLQ
Trigger: CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATT...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGCCAGAAGTCAGGACACTaGGGGCTGGAAACCAACTTA +
Preference number: 4 (lower is better)
Translates to: LKASTIPPTVTTLPHRQGQKSGH*GLETNL
Trigger: TAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTG...GCCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
3UTR CAA 72 bp TGCCCTCCAAGATGTGGGCGGGCCTTGTCTAATCAGTaGAAGGCCTCCACTATTCCACCCACAGTAACCACC +
Preference number: 4 (lower is better)
Translates to: CPPRCGRALSNQ*KASTIPPTVTT
Trigger: GGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCCACATCTTGGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATAGCACCCGGAGAGGTTTCTCCCTaGATGGAGGGCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GWKPTYKTERARTELIAPGEVSP*MEGREG
Trigger: CCCCTCCCTGCCCTCCATTCAGGGAGAAACCTCTCC...GGGTGCTATCAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp CAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGAAGAGCACATCACTGTaGTGCACCGTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QLKASTIPPTVTTLPHRQKSTSL*CTVSLL
Trigger: CAACAAGGAGACGGTGCAGCACAGTGATGTGCTCTT...CTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGAAAGAGCACATCACTGTaGTGCACCGTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGKSTSL*CTVSLL
Trigger: CAACAAGGAGACGGTGCAGCACAGTGATGTGCTCTT...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp GCAGACAGAAGTCAGGACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGACGCTGCTCAGCAGCTaGTCCATGAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ADRSQDTGGWKPTYKTERTLLSS*SMSLPS
Trigger: GGACGGGAGGCTCATGGAGCAGCTGCTGAGCAGCGT...CCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCAGACAGAAGTCAGGACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGCTGTCCGGAGACCCCTaGCCCAAAGCCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: ADRSQDTGGWKPTYKTERLSGDP*PKAPTD
Trigger: ATCTGTGGGGGCTTTGGGCCAGGGGTCTCCGGACAG...CCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCGGTCCTGACATGGTTTaGGAGCAGAGAAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GLGSTCRPQRFPVGSDVAGPDMV*EQRRKE
Trigger: CTCCTTTCTTCTCTGCTCCCAAACCATGTCAGGACC...GGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GCAGACAGAAGTCAGGACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGAGGTTTCTCCCTGAATaGAGGGCAGGGAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: ADRSQDTGGWKPTYKTERRFLPE*RAGRGR
Trigger: CCGGCCCCTCCCTGCCCTCCATTCAGGGAGAAACCT...CCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCTTCCCCAAATGTCCATaGGATCTGCGTGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: WEALADHRDFQWEVMWPLFPKCP*DLRAWQ
Trigger: CTGCCAAGCACGCAGATCCCATGGACATTTGGGGAA...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGCAGAAGTCAGGACACTaGGGGCTGGAAACCAACTTA +
Preference number: 4 (lower is better)
Translates to: WPQKFTSSPRSPFPKCPWQKSGH*GLETNL
Trigger: TAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTG...CCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp GACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATTTCCAGTGGGAAGTaGTGTGGCCCCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DTGGWKPTYKTERARTELISSGK*CGPSLA
Trigger: AGCCAGGGAGGGGCCACATCACTTCCCACTGGAAAT...CAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp AGAAAGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTAAGAGCACATCACTGTaGTGCACCGTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RKEVEVGESTPVLGWEALKSTSL*CTVSLL
Trigger: CAACAAGGAGACGGTGCAGCACAGTGATGTGCTCTT...AAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR GCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGGCTGGGAAGCACTTaGAGACCACAGAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVGLGST*RPQRFP
Trigger: TGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGCCAGGTCCATGTCTaGGGAGCTAGCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVGQVHV*GASHYL
Trigger: AAGATAATGGCTAGCTCCCCAGACATGGACCTGGCC...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GWEALADHRDFQWEVMWPKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATAGCACCCAAGGTGGTGGCAGGATaGTGGTCAGGCAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: GWKPTYKTERARTELIAPKVVAG*WSGRTC
Trigger: ACACGTCCTGCCTGACCACCATCCTGCCACCACCTT...GGGTGCTATCAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp CACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCAAGGTGGTCCTGACATaGTTTGGGAGCAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: HRSSPAAQGALSPNVHGIKVVLT*FGSREE
Trigger: TTCTTCTCTGCTCCCAAACCATGTCAGGACCACCTT...GATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGGGCCAGGTCCATGTCTaGGGAGCTAGCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: DTGGWKPTYKTERARTELGQVHV*GASHYL
Trigger: AAGATAATGGCTAGCTCCCCAGACATGGACCTGGCC...CAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGCAGAAGTCAGGACACTaGGGGCTGGAAACCAACTTA +
Preference number: 4 (lower is better)
Translates to: DTGGWKPTYKTERARTELQKSGH*GLETNL
Trigger: TAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTG...CAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp GGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATAGCACCCCAGAAGTCAGGACACTaGGGGCTGGAAACCAACTTA +
Preference number: 4 (lower is better)
Translates to: GWKPTYKTERARTELIAPQKSGH*GLETNL
Trigger: TAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTG...GGGTGCTATCAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TTTGCATTAGATTACATTGACATTTTAATCAGTAAGGCAGATGCCCTCCAAGATAGGTTTCTCCCTGAATaGAGGGCAGGGAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FALDYIDILISKADALQDRFLPE*RAGRGR
Trigger: CCGGCCCCTCCCTGCCCTCCATTCAGGGAGAAACCT...ATCTTGGAGGGCATCTGCCTTACTGATTAAAATGTCAATGTAATCTAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR TCA 90 bp TTTGCATTAGATTACATTGACATTTTAATCAGTAAGGCAGATGCCCTCCAAGATAGAGGAAGGTGGTCCTaGCATGGTTTGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FALDYIDILISKADALQDRGRWS*HGLGAE
Trigger: CTCTGCTCCCAAACCATGTCAGGACCACCTTCCTCT...ATCTTGGAGGGCATCTGCCTTACTGATTAAAATGTCAATGTAATCTAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CCA 90 bp TTTGCATTAGATTACATTGACATTTTAATCAGTAAGGCAGATGCCCTCCAAGATGCCTCCCTCCTCATGTaGCAGACAGAAGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: FALDYIDILISKADALQDASLLM*QTEVRT
Trigger: TGTCCTGACTTCTGTCTGCCACATGAGGAGGGAGGC...ATCTTGGAGGGCATCTGCCTTACTGATTAAAATGTCAATGTAATCTAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS GCA 90 bp ACCGCCGCCCACCATTCCCGGAGCCCGACCCCAACCCAGCTACCGTaGGCGGGTCGTACCCACCCCTCAGCGCTGCGGCCGCCACGCGGC +
Preference number: 5 (lower is better)
Translates to: TAAHHSRSPTPTQLP*AGRTHPSALRPPRG
Trigger: GCCGCGTGGCGGCCGCAGCGCTGAGGGGTGGGTACGACCCGCGCACGGTAGCTGGGTTGGGGTCGGGCTCCGGGAATGGTGGGCGGCGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329875.13
CDS CCA 90 bp GCCCGATTGGGGCCTGTGAGGGGCCCTCCACGCAGGGCTTTGTCTTaGGCCACCCGGACACGGACGCGTCCAGCTGGCGTCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: ARLGPVRGPPRRALS*ATRTRTRPAGVPGR
Trigger: GCGCCCAGGGACGCCAGCTGGACGCGTCCGTGTCCGGGTGGCCCAAGACAAAGCCCTGCGTGGAGGGCCCCTCACAGGCCCCAATCGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581271.5
CDS GCA 90 bp CTGCTCAGCAGCTGCTCCATGAGCCTCCCGTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACGGTGGCCCCCTCCCGCACCACGACT +
Preference number: 5 (lower is better)
Translates to: LLSSCSMSLPSSTWA*VPVAYTVAPSRTTT
Trigger: AGTCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAGGCTCATGGAGCAGCTGCTGAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000402252.6
ENST00000403172.8
ENST00000405481.8
ENST00000577624.5
ENST00000577756.5
ENST00000579698.5
ENST00000582198.5
ENST00000584848.5
ENST00000585215.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTTGAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRTCQSLPAGARLRGSSLRTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...CAAGCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS CCA 90 bp CACGCTCATGCTGTCCGGAGACCCCTGGCCCAAAGCCCCCACAGATaGCACCGGCTCTGCGGGACGAGACCGGCAGGATCGAGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: HAHAVRRPLAQSPHR*HRLCGTRPAGSRAS
Trigger: ACTTGCTCTCGATCCTGCCGGTCTCGTCCCGCAGAGCCGGTGCCATCTGTGGGGGCTTTGGGCCAGGGGTCTCCGGACAGCATGAGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS-3UTR CAA 90 bp TGTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACCCAGGAGAGCTGACGTaGTCCTTGAGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: CGPSLAMSLAGPCADQSHPGELT*SLSWPG
Trigger: CCCAGGCCAGCTCAAGGACAACGTCAGCTCTCCTGG...GTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp GGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGAGGGGGTCCTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: GREGAWDPTSAEPSQRGSSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...GGACCCCCTCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCCTGCGGGGGAGCAGCTaGGTGTGGCCAGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: AGPCADQSHRKWATLGTPLRGSS*VWPEGD
Trigger: GTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAG...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACACCCTTCACGCTGGACTaGGGATGCCTGGACCCTCTG +
Preference number: 5 (lower is better)
Translates to: VAPPWLCPWLAPALIRATPFTLD*GCLDPL
Trigger: CAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCGCTGCTGTGAAGCCCTaGGCCAGGGCAAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGPCADQSHRKWATLGTPAAVKP*ARAKAS
Trigger: GCTGGCTTTTGCCCTGGCCAAGGGCTTCACAGCAGC...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TGGTCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: WSGRTCQSLPAGARLRGSSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...GCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR CAA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCTGCGGGGGAGCAGCTaGGTGTGGCCAGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: WLAPALIRATESGPLWGPLRGSS*VWPEGD
Trigger: GTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAG...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CCCGTGCCAGCTGATACTGGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTGCTGTGAAGCCCTaGGCCAGGGCAAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PVPADTGVGVGEDPPGSRAAVKP*ARAKAS
Trigger: GCTGGCTTTTGCCCTGGCCAAGGGCTTCACAGCAGC...TCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCCAGTATCAGCTGGCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTGCACCGTCTCCTTGTaGTGGGGTGTCAACTTCACC +
Preference number: 5 (lower is better)
Translates to: SGRTCQSLPAGARLRGSSCTVSL*WGVNFT
Trigger: GGTGAAGTTGACACCCCACAACAAGGAGACGGTGCA...GCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR CAA 90 bp TGGTCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCTGCTGCACCGTCTCCTaGTTGTGGGGTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: WSGRTCQSLPAGARLRGSCCTVS*LWGVNF
Trigger: GAAGTTGACACCCCACAACAAGGAGACGGTGCAGCA...GCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR CAA 90 bp CAGGGAGGGGCCGGGAGGGGGCGTGGGATCCCACCTCTGCTGAGCCTTCACAGATGCTGCACCGTCTCCTaGTTGTGGGGTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: QGGAGRGRGIPPLLSLHRCCTVS*LWGVNF
Trigger: GAAGTTGACACCCCACAACAAGGAGACGGTGCAGCA...TCTGTGAAGGCTCAGCAGAGGTGGGATCCCACGCCCCCTCCCGGCCCCTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TCAGGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTGCTGCACCGTCTCCTaGTTGTGGGGTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: SGRTCQSLPAGARLRGSSCCTVS*LWGVNF
Trigger: GAAGTTGACACCCCACAACAAGGAGACGGTGCAGCA...GCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTGAGTGCAGCAGCATCTaGGCAGCCCCCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFECSSI*AAPRRA
Trigger: GGCCCTCCTGGGGGCTGCCAAGATGCTGCTGCACTC...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
CDS-3UTR CAA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTGAGTGCAGCAGCATCTaGGCAGCCCCCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LCPWLAPALIRATESGPLECSSI*AAPRRA
Trigger: GGCCCTCCTGGGGGCTGCCAAGATGCTGCTGCACTC...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000619204.4
CDS-3UTR CAA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTGCGGGGGAGCAGCTaGGTGTGGCCAGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: WLCPWLAPALIRATESGPLRGSS*VWPEGD
Trigger: GTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAG...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGCAGGACGTGTCAATCCTTGCCCGCTGGGGCCAGGCTGCGGGGGAGCAGCTTGTGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 5 (lower is better)
Translates to: GRTCQSLPAGARLRGSSLWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...CAAGCTGCTCCCCCGCAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577756.5
ENST00000584848.5
ENST00000629768.2
CDS GCA 90 bp GGGCAGCCAAGACGCCCCTTCTGGATGGCCGCGTGGTTCAGAGCCTaGATGGGCTTCAGGATCCTGCTGTCATTGCCTGGGGTTCACAGG +
Preference number: 5 (lower is better)
Translates to: GQPRRPFWMAAWFRA*MGFRILLSLPGVHR
Trigger: CCTGTGAACCCCAGGCAATGACAGCAGGATCCTGAAGCCCATGCAGGCTCTGAACCACGCGGCCATCCAGAAGGGGCGTCTTGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS-3UTR CAA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTGCTGCTGTGAAGCCCTaGGCCAGGGCAAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLAAVKP*ARAKAS
Trigger: GCTGGCTTTTGCCCTGGCCAAGGGCTTCACAGCAGC...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAGCTAGCCATTATCTaGTGGGCAGCCAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: VAPPWLCPWLAPALIRATELAII*WAAKTP
Trigger: AGGCGTCTTGGCTGCCCACAAGATAATGGCTAGCTC...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTGGCCCCTCCCTGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACATGCACCGTCTCCTTGTaGTGGGGTGTCAACTTCACC +
Preference number: 5 (lower is better)
Translates to: VAPPWLCPWLAPALIRATCTVSL*WGVNFT
Trigger: GGTGAAGTTGACACCCCACAACAAGGAGACGGTGCA...TGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCAGGGAGGGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGAGCTGACGTTGTCCTaGAGCTGGCCTGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: VALHAGLGMPGPSGPSHTELTLS*SWPGCC
Trigger: ACAGCACCCAGGCCAGCTCAAGGACAACGTCAGCTC...CGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGCTGCGGGGGAGCAGCTaGGTGTGGCCAGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: MSLAGPCADQSHRKWATLLRGSS*VWPEGD
Trigger: GTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAG...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGRTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTCTAGAGGAAGGTGGTCCTGACATGGGATCTGCGTGCTaGGCAGCCAAGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GVGEDPPGSRALEEGGPDMGSAC*AAKRGC
Trigger: ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCAT...GTCAGGACCACCTTCCTCTAGAGCTCGGGAGCCCGGAGGGTCTTCACCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGGGAATGGGATCTGCGTGCTaGGCAGCCAAGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: ALHAGLGMPGPSGPSHTGMGSAC*AAKRGC
Trigger: ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCAT...TCCCGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS GCA 90 bp CCGCGTGGTTCAGAGCCTGCATGGGCTTCAGGATCCTGCTGTCATTaGCTGGGGTTCACAGGGTTCTGCTGCGGCCAGAGGAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: PRGSEPAWASGSCCH*LGFTGFCCGQRSRA
Trigger: TGCTCTGCTCCTCTGGCCGCAGCAGAACCCTGTGAACCCCAGGCAATGACAGCAGGATCCTGAAGCCCATGCAGGCTCTGAACCACGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS GCA 90 bp TCTGGATGGCCGCGTGGTTCAGAGCCTGCATGGGCTTCAGGATCCTaGTGTCATTGCCTGGGGTTCACAGGGTTCTGCTGCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SGWPRGSEPAWASGS*CHCLGFTGFCCGQR
Trigger: CCTCTGGCCGCAGCAGAACCCTGTGAACCCCAGGCAATGACAGCAGGATCCTGAAGCCCATGCAGGCTCTGAACCACGCGGCCATCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTGCTGCTGTGAAGCCCTaGGCCAGGGCAAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFAAVKP*ARAKAS
Trigger: GCTGGCTTTTGCCCTGGCCAAGGGCTTCACAGCAGC...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGCTGCTGTGAAGCCCTaGGCCAGGGCAAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: MSLAGPCADQSHRKWATLAAVKP*ARAKAS
Trigger: GCTGGCTTTTGCCCTGGCCAAGGGCTTCACAGCAGC...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCTGCACCGTCTCCTTGTaGTGGGGTGTCAACTTCACC +
Preference number: 5 (lower is better)
Translates to: AGPCADQSHRKWATLGTPCTVSL*WGVNFT
Trigger: GGTGAAGTTGACACCCCACAACAAGGAGACGGTGCA...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGAGAGTGCAGCAGCATCTaGGCAGCCCCCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGECSSI*AAPRRA
Trigger: GGCCCTCCTGGGGGCTGCCAAGATGCTGCTGCACTC...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000619204.4
CDS-3UTR CAA 90 bp CCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCCCAGGAGAGCTGACGTaGTCCTTGAGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PNVHGICVLGSQEGLWPFPGELT*SLSWPG
Trigger: CCCAGGCCAGCTCAAGGACAACGTCAGCTCTCCTGG...GAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTCCAGGAGAGCTGACGTaGTCCTTGAGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LCPWLAPALIRATESGPLPGELT*SLSWPG
Trigger: CCCAGGCCAGCTCAAGGACAACGTCAGCTCTCCTGG...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCCAGGAGAGCTGACGTaGTCCTTGAGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GALSPNVHGICVLGSQEGPGELT*SLSWPG
Trigger: CCCAGGCCAGCTCAAGGACAACGTCAGCTCTCCTGG...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp GCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCGAGGCCTCCACAGCGTaGATGAGCAGGGAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: AAQGALSPNVHGICVLGSEASTA*MSRERK
Trigger: CTTCCGCTCCCTGCTCATCAACGCTGTGGAGGCCTC...GCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCGAGGCCTCCACAGCGTaGATGAGCAGGGAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QPKEPFPQMSMGSACLAAEASTA*MSRERK
Trigger: CTTCCGCTCCCTGCTCATCAACGCTGTGGAGGCCTC...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp CATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: HGICVLGSQEGLWPFTLDSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...GTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGCTGCGGGGGAGCAGCTaGGTGTGGCCAGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQLRGSS*VWPEGD
Trigger: GTCACCTTCTGGCCACACCAAGCTGCTCCCCCGCAG...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: AGPCADQSHRKWATLGTPERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TGTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACATGGGATCTGCGTGCTaGGCAGCCAAGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: CGPSRWTWDAWTLWPFSHMGSAC*AAKRGC
Trigger: ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCAT...GTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS CCA 90 bp AGCCAAGACGCCCCTTCTGGATGGCCGCGTGGTTCAGAGCCTGCATaGGCTTCAGGATCCTGCTGTCATTGCCTGGGGTTCACAGGGTTC +
Preference number: 5 (lower is better)
Translates to: SQDAPSGWPRGSEPA*ASGSCCHCLGFTGF
Trigger: GAACCCTGTGAACCCCAGGCAATGACAGCAGGATCCTGAAGCCCATGCAGGCTCTGAACCACGCGGCCATCCAGAAGGGGCGTCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS-3UTR CAA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTACCACGACTGGAGTGTaGGTCATGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLTTTGV*VMQRMT
Trigger: GGTCATCCGCTGCATGACCAACACTCCAGTCGTGGT...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCAACCACGACTGGAGTGTaGGTCATGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: WLCPWLAPALIRATESGPTTTGV*VMQRMT
Trigger: GGTCATCCGCTGCATGACCAACACTCCAGTCGTGGT...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TGTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACACCACGACTGGAGTGTaGGTCATGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: CGPSRWTWDAWTLWPFSHTTTGV*VMQRMT
Trigger: GGTCATCCGCTGCATGACCAACACTCCAGTCGTGGT...GTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTGAGCTGACGTTGTCCTaGAGCTGGCCTGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: QEQEVVATEVHQQPKEPFELTLS*SWPGCC
Trigger: ACAGCACCCAGGCCAGCTCAAGGACAACGTCAGCTC...AAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GAGGTCAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: EVRSRRWWPQKFTSSPRSSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...GCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCCCGAGTCCAGCTTCACCTaGTCCAGGATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: AGPCADQSHRKWATLGTPESSFT*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGTGAAGCTGGACTC...GGGGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QLKASTIPPTVTTLPHRQRTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...CTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCTGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 5 (lower is better)
Translates to: LAGPCADQSHRKWATLGTWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTCTAGAGGAAGGTGGTCCTGACTGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 5 (lower is better)
Translates to: GVGEDPPGSRALEEGGPDWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...GTCAGGACCACCTTCCTCTAGAGCTCGGGAGCCCGGAGGGTCTTCACCCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCCGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: WLAPALIRATESGPLWGPERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...GGGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGGGACCGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LAGPCADQSHRKWATLGTERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...GGTCCCCAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGTCACAGAGGGGGTCCTaGACCTTTGCTCTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SMGSACLAAKRGCGPSRWSQRGS*TFALRK
Trigger: CTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGA...CCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACCCCTTCACGCTGGACTaGGGATGCCTGGACCCTCTG +
Preference number: 5 (lower is better)
Translates to: VEVGESTPVLGWEALADHPFTLD*GCLDPL
Trigger: CAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS CCA 90 bp GTGGTTCAGAGCCTGCATGGGCTTCAGGATCCTGCTGTCATTGCCTaGGGTTCACAGGGTTCTGCTGCGGCCAGAGGAGCAGAGCATGGA +
Preference number: 5 (lower is better)
Translates to: VVQSLHGLQDPAVIA*GSQGSAAARGAEHG
Trigger: TCCATGCTCTGCTCCTCTGGCCGCAGCAGAACCCTGTGAACCCCAGGCAATGACAGCAGGATCCTGAAGCCCATGCAGGCTCTGAACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS-3UTR CAA 90 bp CCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTGCACCGTCTCCTTGTaGTGGGGTGTCAACTTCACC +
Preference number: 5 (lower is better)
Translates to: PQMSMGSACLAAKRGCGPCTVSL*WGVNFT
Trigger: GGTGAAGTTGACACCCCACAACAAGGAGACGGTGCA...AGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTCACGCTGGACTTTGCACCGTCTCCTTGTaGTGGGGTGTCAACTTCACC +
Preference number: 5 (lower is better)
Translates to: WDLRAWQPRGAVALHAGLCTVSL*WGVNFT
Trigger: GGTGAAGTTGACACCCCACAACAAGGAGACGGTGCA...AAGTCCAGCGTGAAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCACCACGACTGGAGTGTaGGTCATGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: EPFPQMSMGSACLAAKRGTTTGV*VMQRMT
Trigger: GGTCATCCGCTGCATGACCAACACTCCAGTCGTGGT...GCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTACCACGACTGGAGTGTaGGTCATGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: PKCPWDLRAWQPRGAVALTTTGV*VMQRMT
Trigger: GGTCATCCGCTGCATGACCAACACTCCAGTCGTGGT...AAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACGAGCTGACGTTGTCCTaGAGCTGGCCTGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: EVEVGESTPVLGWEALADELTLS*SWPGCC
Trigger: ACAGCACCCAGGCCAGCTCAAGGACAACGTCAGCTC...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp GGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCGAGGCCTCCACAGCGTaGATGAGCAGGGAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GWEALADHRDFQWEVMWPEASTA*MSRERK
Trigger: CTTCCGCTCCCTGCTCATCAACGCTGTGGAGGCCTC...GGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp CCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: PKCPWDLRAWQPRGAVALSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...AAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SVEGLHYSTHSNHPPTQARTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...TGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TGGCTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCATGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 5 (lower is better)
Translates to: WLCPWLAPALIRATESGPWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...TGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGAGTAGGAGTGGGTGAAGACCCTCCGGGCTCCCGAGCTCTAGAGGAAGGTGGTTGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 5 (lower is better)
Translates to: GVGVGEDPPGSRALEEGGWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...ACCACCTTCCTCTAGAGCTCGGGAGCCCGGAGGGTCTTCACCCACTCCTACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GAGGTCAGGAGCAGGAGGTGGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCTCACAGAGGGGGTCCTaGACCTTTGCTCTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: EVRSRRWWPQKFTSSPRSSQRGS*TFALRK
Trigger: CTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGA...GCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACCACCTCCTGCTCCTGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGCCCTTCACGCTGGACTaGGGATGCCTGGACCCTCTG +
Preference number: 5 (lower is better)
Translates to: QLKASTIPPTVTTLPHRQPFTLD*GCLDPL
Trigger: CAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGG...CTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGATGGGATCTGCGTGCTaGGCAGCCAAGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGMGSAC*AAKRGC
Trigger: ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCAT...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp ACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGATGGGATCTGCGTGCTaGGCAGCCAAGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: TSSPRSPFPKCPWDLRAWMGSAC*AAKRGC
Trigger: ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCAT...CCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTGGCCCTTCACGCTGGACTTGGGATGCCTGGACCCTCTGGCCCTTCTCACACGAGAGGAAGGTGGTCCTaGTCCAGGATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VALHAGLGMPGPSGPSHTRGRWS*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGACCACCTTCCTCT...CGTGTGAGAAGGGCCAGAGGGTCCAGGCATCCCAAGTCCAGCGTGAAGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337943.9
CDS-3UTR CAA 90 bp GGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGGAGCTAGCCATTATCTaGTGGGCAGCCAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: GALSPNVHGICVLGSQEGELAII*WAAKTP
Trigger: AGGCGTCTTGGCTGCCCACAAGATAATGGCTAGCTC...CCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCTGCTGCACCGTCTCCTaGTTGTGGGGTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: QPKEPFPQMSMGSACLAACCTVS*LWGVNF
Trigger: GAAGTTGACACCCCACAACAAGGAGACGGTGCAGCA...GGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGTGCTGCACCGTCTCCTaGTTGTGGGGTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: MSLAGPCADQSHRKWATLCCTVS*LWGVNF
Trigger: GAAGTTGACACCCCACAACAAGGAGACGGTGCAGCA...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACCACGACTGGAGTGTaGGTCATGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTTTTGV*VMQRMT
Trigger: GGTCATCCGCTGCATGACCAACACTCCAGTCGTGGT...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGAGAGCTGACGTTGTCCTaGAGCTGGCCTGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: ATEVHQQPKEPFPQMSMGELTLS*SWPGCC
Trigger: ACAGCACCCAGGCCAGCTCAAGGACAACGTCAGCTC...TCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp CACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCCCAGGAGAGCTGACGTaGTCCTTGAGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: HRSSPAAQGALSPNVHGIPGELT*SLSWPG
Trigger: CCCAGGCCAGCTCAAGGACAACGTCAGCTCTCCTGG...GATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp CACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCGAGGCCTCCACAGCGTaGATGAGCAGGGAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: HRSSPAAQGALSPNVHGIEASTA*MSRERK
Trigger: CTTCCGCTCCCTGCTCATCAACGCTGTGGAGGCCTC...GATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: VEVGESTPVLGWEALADHSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVRTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGGCCCTTGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: PKCPWDLRAWQPRGAVALERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...AAGGGCCACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CTATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LCPWLAPALIRATESGPLERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...AAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACGAGCTAGCCATTATCTaGTGGGCAGCCAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: EVEVGESTPVLGWEALADELAII*WAAKTP
Trigger: AGGCGTCTTGGCTGCCCACAAGATAATGGCTAGCTC...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACGAGCTAGCCATTATCTaGTGGGCAGCCAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: VEVGESTPVLGWEALADHELAII*WAAKTP
Trigger: AGGCGTCTTGGCTGCCCACAAGATAATGGCTAGCTC...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp AGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCTGCACCGTCTCCTTGTaGTGGGGTGTCAACTTCACC +
Preference number: 5 (lower is better)
Translates to: RLRLGNPPLFWAGKHLQTCTVSL*WGVNFT
Trigger: GGTGAAGTTGACACCCCACAACAAGGAGACGGTGCA...GGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGTGCACCGTCTCCTTGTaGTGGGGTGTCAACTTCACC +
Preference number: 5 (lower is better)
Translates to: PKEPFPQMSMGSACLAAKCTVSL*WGVNFT
Trigger: GGTGAAGTTGACACCCCACAACAAGGAGACGGTGCA...CTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGGCTCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACTGCACCGTCTCCTTGTaGTGGGGTGTCAACTTCACC +
Preference number: 5 (lower is better)
Translates to: VEVGESTPVLGWEALADHCTVSL*WGVNFT
Trigger: GGTGAAGTTGACACCCCACAACAAGGAGACGGTGCA...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp AGGAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGTGCTGCACCGTCTCCTaGTTGTGGGGTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: RRLRLGNPPLFWAGKHLQCCTVS*LWGVNF
Trigger: GAAGTTGACACCCCACAACAAGGAGACGGTGCAGCA...CTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACCACTGCTGCACCGTCTCCTaGTTGTGGGGTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: VEVGESTPVLGWEALADHCCTVS*LWGVNF
Trigger: GAAGTTGACACCCCACAACAAGGAGACGGTGCAGCA...GTGGTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp ATGTCCCTGGCTGGCCCCTGCGCTGATCAGAGCCACAGAAAGTGGGCCACTTTGGAGTCCAGCTTCACCTaGTCCAGGATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: MSLAGPCADQSHRKWATLESSFT*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGTGAAGCTGGACTC...CAAAGTGGCCCACTTTCTGTGGCTCTGATCAGCGCAGGGGCCAGCCAGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CCCTTTCCCCAAATGTCCATGGGATCTGCGTGCTTGGCAGCCAAGAGGGGCTGTGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: PFPQMSMGSACLAAKRGCERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...ACAGCCCCTCTTGGCTGCCAAGCACGCAGATCCCATGGACATTTGGGGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACTCACAGAGGGGGTCCTaGACCTTTGCTCTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: EVEVGESTPVLGWEALADSQRGS*TFALRK
Trigger: CTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGA...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGTGGCCACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGAGCTAGCCATTATCTaGTGGGCAGCCAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: GGHRSSPAAQGALSPNVHELAII*WAAKTP
Trigger: AGGCGTCTTGGCTGCCCACAAGATAATGGCTAGCTC...ATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCCCTCACCACGACTGGAGTGTaGGTCATGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: WEALADHRDFQWEVMWPLTTTGV*VMQRMT
Trigger: GGTCATCCGCTGCATGACCAACACTCCAGTCGTGGT...GAGGGGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCACGACTGGAGTGTaGGTCATGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: GRALSNQLKASTIPPTVTTTTGV*VMQRMT
Trigger: GGTCATCCGCTGCATGACCAACACTCCAGTCGTGGT...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGTCCAGGATGGTCTTCTaGATGGCGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: LGWEALADHRDFQWEVMWSRMVF*MAAGDT
Trigger: GGTGTCACCAGCCGCCATCAAGAAGACCATCCTGGA...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GAGGTTGAGGTTGGGGAATCCACCCCTGTTCTGGGCTGGGAAGCACTTGCAGACGAGTCCAGCTTCACCTaGTCCAGGATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: EVEVGESTPVLGWEALADESSFT*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGTGAAGCTGGACTC...GTCTGCAAGTGCTTCCCAGCCCAGAACAGGGGTGGATTCCCCAACCTCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GTTGAAGGCCTCCACTATTCCACCCACAGTAACCACCCTCCCACACAGGCAGGGGAGTCCAGCTTCACCTaGTCCAGGATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VEGLHYSTHSNHPPTQAGESSFT*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGTGAAGCTGGACTC...CCCTGCCTGTGTGGGAGGGTGGTTACTGTGGGTGGAATAGTGGAGGCCTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCTGGGCTGGGAAGCACTaGCAGACCACAGAGATTTCC +
Preference number: 5 (lower is better)
Translates to: GLGSTCRPQRFPVGSDVAWAGKH*QTTEIS
Trigger: GGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCA...GGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGCCGAAAGGAGGTTGAGGTaGGGGAATCCACCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: GLGSTCRPQRFPVGSDVAERRLR*GNPPLF
Trigger: GAACAGGGGTGGATTCCCCAACCTCAACCTCCTTTC...GGCCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGGAGCTAGCCATTATCTaGTGGGCAGCCAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: LGWEALADHRDFQWEVMWELAII*WAAKTP
Trigger: AGGCGTCTTGGCTGCCCACAAGATAATGGCTAGCTC...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGGCGGGCCTTGTCTAATCAGTTGAAGGCCTCCACTATTCCACCCACAGTAACCGAGCTAGCCATTATCTaGTGGGCAGCCAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: GRALSNQLKASTIPPTVTELAII*WAAKTP
Trigger: AGGCGTCTTGGCTGCCCACAAGATAATGGCTAGCTC...GGTTACTGTGGGTGGAATAGTGGAGGCCTTCAACTGATTAGACAAGGCCCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGATAGCACCCAGGACGTGTCAATCCTaGCCCGCTGGGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GWKPTYKTERARTELIAPRTCQS*PAGARL
Trigger: CAGCCTGGCCCCAGCGGGCAAGGATTGACACGTCCT...GGGTGCTATCAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CACAGAAGTTCACCAGCAGCCCAAGGAGCCCTTTCCCCAAATGTCCATGGGATCTCACAGAGGGGGTCCTaGACCTTTGCTCTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: HRSSPAAQGALSPNVHGISQRGS*TFALRK
Trigger: CTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGA...GATCCCATGGACATTTGGGGAAAGGGCTCCTTGGGCTGCTGGTGAACTTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp CTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGTCACAGAGGGGGTCCTaGACCTTTGCTCTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LGWEALADHRDFQWEVMWSQRGS*TFALRK
Trigger: CTTCCTGAGAGCAAAGGTCAAGGACCCCCTCTGTGA...CCACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGGAGCTAGCCATTATCTaGTGGGCAGCCAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVELAII*WAAKTP
Trigger: AGGCGTCTTGGCTGCCCACAAGATAATGGCTAGCTC...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TCTGGGCTGGGAAGCACTTGCAGACCACAGAGATTTCCAGTGGGAAGTGATGTGTGCTGCACCGTCTCCTaGTTGTGGGGTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: SGLGSTCRPQRFPVGSDVCCTVS*LWGVNF
Trigger: GAAGTTGACACCCCACAACAAGGAGACGGTGCAGCA...CACATCACTTCCCACTGGAAATCTCTGTGGTCTGCAAGTGCTTCCCAGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329875.13
ENST00000402252.6
ENST00000403172.8
ENST00000577756.5
ENST00000584848.5
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp GCAGACAGAAGTCAGGACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGGAGCTGACGTTGTCCTaGAGCTGGCCTGGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: ADRSQDTGGWKPTYKTERELTLS*SWPGCC
Trigger: ACAGCACCCAGGCCAGCTCAAGGACAACGTCAGCTC...CCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTCCTGACTTCTGTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000403172.8
ENST00000619204.4
CDS-3UTR CAA 90 bp GACACTGGGGGCTGGAAACCAACTTATAAAACTGAAAGGGCCAGGACAGAACTGGAGTCCAGCTTCACCTaGTCCAGGATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: DTGGWKPTYKTERARTELESSFT*SRMVFL
Trigger: CAAGAAGACCATCCTGGACAAGGTGAAGCTGGACTC...CAGTTCTGTCCTGGCCCTTTCAGTTTTATAAGTTGGTTTCCAGCCCCCAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329875.13
ENST00000403172.8
ENST00000619204.4
ENST00000629768.2
CDS-3UTR CAA 90 bp TTTGCATTAGATTACATTGACATTTTAATCAGTAAGGCAGATGCCCTCCAAGATGAGTGCAGCAGCATCTaGGCAGCCCCCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: FALDYIDILISKADALQDECSSI*AAPRRA
Trigger: GGCCCTCCTGGGGGCTGCCAAGATGCTGCTGCACTC...ATCTTGGAGGGCATCTGCCTTACTGATTAAAATGTCAATGTAATCTAATGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337943.9
ENST00000619204.4
CDS GCA 72 bp CACCATTCCCGGAGCCCGACCCCAACCCAGCTACCGTaGGCGGGTCGTACCCACCCCTCAGCGCTGCGGCCG +
Preference number: 6 (lower is better)
Translates to: HHSRSPTPTQLP*AGRTHPSALRP
Trigger: CGGCCGCAGCGCTGAGGGGTGGGTACGACCCGCGCACGGTAGCTGGGTTGGGGTCGGGCTCCGGGAATGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329875.13
CDS CAA 90 bp GGCCCGATTGGGGCCTGTGAGGGGCCCTCCACGCAGGGCTTTGTCTaGGGCCACCCGGACACGGACGCGTCCAGCTGGCGTCCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: GPIGACEGPSTQGFV*GHPDTDASSWRPWA
Trigger: CGCCCAGGGACGCCAGCTGGACGCGTCCGTGTCCGGGTGGCCCAAGACAAAGCCCTGCGTGGAGGGCCCCTCACAGGCCCCAATCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581271.5
CDS CCA 72 bp GGGCCTGTGAGGGGCCCTCCACGCAGGGCTTTGTCTTaGGCCACCCGGACACGGACGCGTCCAGCTGGCGTC +
Preference number: 6 (lower is better)
Translates to: GPVRGPPRRALS*ATRTRTRPAGV
Trigger: GACGCCAGCTGGACGCGTCCGTGTCCGGGTGGCCCAAGACAAAGCCCTGCGTGGAGGGCCCCTCACAGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581271.5
CDS CAA 72 bp GGGGCCTGTGAGGGGCCCTCCACGCAGGGCTTTGTCTaGGGCCACCCGGACACGGACGCGTCCAGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: GACEGPSTQGFV*GHPDTDASSWR
Trigger: ACGCCAGCTGGACGCGTCCGTGTCCGGGTGGCCCAAGACAAAGCCCTGCGTGGAGGGCCCCTCACAGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581271.5
CDS GCA 72 bp AGCTGCTCCATGAGCCTCCCGTCCTCCACCTGGGCGTaGGTGCCTGTGGCATACACGGTGGCCCCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: SCSMSLPSSTWA*VPVAYTVAPSR
Trigger: GCGGGAGGGGGCCACCGTGTATGCCACAGGCACGCACGCCCAGGTGGAGGACGGGAGGCTCATGGAGCAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000402252.6
ENST00000403172.8
ENST00000405481.8
ENST00000577624.5
ENST00000577756.5
ENST00000579698.5
ENST00000582198.5
ENST00000584848.5
ENST00000585215.5
ENST00000619204.4
ENST00000629768.2
CDS CAA 72 bp CGATTGGGGCCTGTGAGGGGCCCTCCACGCAGGGCTTaGTCTTGGGCCACCCGGACACGGACGCGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: RLGPVRGPPRRA*SWATRTRTRPA
Trigger: AGCTGGACGCGTCCGTGTCCGGGTGGCCCAAGACAAAGCCCTGCGTGGAGGGCCCCTCACAGGCCCCAATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581271.5
CDS CCA 72 bp CCTCCACCTGGGCGTGCGTGCCTGTGGCATACACGGTaGCCCCCTCCCGCACCACGACTGGAGTGTTGGTCA +
Preference number: 6 (lower is better)
Translates to: PPPGRACLWHTR*PPPAPRLECWS
Trigger: TGACCAACACTCCAGTCGTGGTGCGGGAGGGGGCCACCGTGTATGCCACAGGCACGCACGCCCAGGTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000329875.13
ENST00000337943.9
ENST00000402252.6
ENST00000403172.8
ENST00000405481.8
ENST00000577624.5
ENST00000577756.5
ENST00000579698.5
ENST00000582198.5
ENST00000584848.5
ENST00000585215.5
ENST00000619204.4
ENST00000629768.2
CDS GCA 72 bp GGTCTAACTTTCCACTTTGCTGTCCGGCCCGTTAACTaGTTCGGGGCCCCCAGTCAGAGCGGCGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: GLTFHFAVRPVN*FGAPSQSGGAW
Trigger: CCAGGCACCGCCGCTCTGACTGGGGGCCCCGAAGCAGTTAACGGGCCGGACAGCAAAGTGGAAAGTTAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329875.13
ENST00000337943.9
CDS CCA 72 bp TGTGGGCAGCCAAGACGCCCCTTCTGGATGGCCGCGTaGTTCAGAGCCTGCATGGGCTTCAGGATCCTGCTG +
Preference number: 6 (lower is better)
Translates to: CGQPRRPFWMAA*FRACMGFRILL
Trigger: CAGCAGGATCCTGAAGCCCATGCAGGCTCTGAACCACGCGGCCATCCAGAAGGGGCGTCTTGGCTGCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS GCA 72 bp GGATCCTGCTGTCATTGCCTGGGGTTCACAGGGTTCTaGTGCGGCCAGAGGAGCAGAGCATGGAGACCGTGG +
Preference number: 6 (lower is better)
Translates to: GSCCHCLGFTGF*CGQRSRAWRPW
Trigger: CCACGGTCTCCATGCTCTGCTCCTCTGGCCGCAGCAGAACCCTGTGAACCCCAGGCAATGACAGCAGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS GCA 72 bp AGACGCCCCTTCTGGATGGCCGCGTGGTTCAGAGCCTaGATGGGCTTCAGGATCCTGCTGTCATTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RRPFWMAAWFRA*MGFRILLSLPG
Trigger: CCCAGGCAATGACAGCAGGATCCTGAAGCCCATGCAGGCTCTGAACCACGCGGCCATCCAGAAGGGGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS GCA 72 bp CCGCGTGGTTCAGAGCCTGCATGGGCTTCAGGATCCTaGTGTCATTGCCTGGGGTTCACAGGGTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PRGSEPAWASGS*CHCLGFTGFCC
Trigger: GCAGCAGAACCCTGTGAACCCCAGGCAATGACAGCAGGATCCTGAAGCCCATGCAGGCTCTGAACCACGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582198.5
CDS CCA 72 bp AGCCTGCATGGGCTTCAGGATCCTGCTGTCATTGCCTaGGGTTCACAGGGTTCTGCTGCGGCCAGAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SLHGLQDPAVIA*GSQGSAAARGA
Trigger: TGCTCCTCTGGCCGCAGCAGAACCCTGTGAACCCCAGGCAATGACAGCAGGATCCTGAAGCCCATGCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582198.5