Pregenerated sensors for PXT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000179165Ensembl transcript IDs: ENST00000454782.3, ENST00000619547.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGTCACCGAGAAGGAGAAGCTGGCACTGCAGATCTGGACATGAGTaGCAAGAGTGGAGCCAACAGGTCACCAGAGGGCATGGTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: MSPRRRSWHCRSGHE*QEWSQQVTRGHGAQ Trigger: CTGGGCACCATGCCCTCTGGTGACCTGTTGGCTCCACTCTTGTCACTCATGTCCAGATCTGCAGTGCCAGCTTCTCCTTCTCGGTGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR CCA 90 bp | TTCCTCACAAGGAGCCCTGGGACCATCCACAGCGCTGGTGTTTTCTaGGCAGCAAGGCTTCCTGGGGTCCTAATTACTCCTTGGGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: FLTRSPGTIHSAGVF*AARLPGVLITPWAL Trigger: TAAAGCCCAAGGAGTAATTAGGACCCCAGGAAGCCTTGCTGCCCAGAAAACACCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR CCA 90 bp | TGTTCAAGGTTTCCTCACAAGGAGCCCTGGGACCATCCACAGCGCTaGTGTTTTCTGGGCAGCAAGGCTTCCTGGGGTCCTAATTACTCC | + |
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Preference number: 1 (lower is better) Translates to: CSRFPHKEPWDHPQR*CFLGSKASWGPNYS Trigger: GGAGTAATTAGGACCCCAGGAAGCCTTGCTGCCCAGAAAACACCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGGAAACCTTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR TCA 90 bp | GCAGCAAGGCTTCCTGGGGTCCTAATTACTCCTTGGGCTTTACCGTaGTGTGATCGCAGACATCTCATAGCTAGCTCCTCCGAAGAGACA | + |
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Preference number: 1 (lower is better) Translates to: AARLPGVLITPWALP*CDRRHLIASSSEET Trigger: TGTCTCTTCGGAGGAGCTAGCTATGAGATGTCTGCGATCACATCACGGTAAAGCCCAAGGAGTAATTAGGACCCCAGGAAGCCTTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR CCA 90 bp | GATGACAGAGCAGGGAAAGATACCTTCGAGCAGGGTCGAGTGGTATaGGAAAACACTGGAGTGGTGAAGGAAGACTTGAAGGGGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: DDRAGKDTFEQGRVV*ENTGVVKEDLKGVT Trigger: TGTGACCCCCTTCAAGTCTTCCTTCACCACTCCAGTGTTTTCCCATACCACTCGACCCTGCTCGAAGGTATCTTTCCCTGCTCTGTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR CAA 90 bp | GACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATaGGGGCAGGGAGGTGACATGTCACCGAGAAGGAGAAGCTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: DKCFTSIFQRGLEPG*GQGGDMSPRRRSWH Trigger: GTGCCAGCTTCTCCTTCTCGGTGACATGTCACCTCCCTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAAGGAAATGTTCAAGGTTTCCTCACAAGGAGCCCTGGGACCATCCACAGGGCAGCAAGGCTTCCTaGGGTCCTAATTACTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PGRKCSRFPHKEPWDHPQGSKAS*GPNYSL Trigger: CAAGGAGTAATTAGGACCCCAGGAAGCCTTGCTGCC...CTGTGGATGGTCCCAGGGCTCCTTGTGAGGAAACCTTGAACATTTCCTTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCAGGTCTTACATTCTTCTAGAAGGCAGGACTGTTGGCCAAGGACTAAGCCCTCACAAGGAGCCCTaGGACCATCCACAGCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SFRSYILLEGRTVGQGLSPHKEP*DHPQRW Trigger: CCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGG...GCTTAGTCCTTGGCCAACAGTCCTGCCTTCTAGAAGAATGTAAGACCTGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR-3UTR CCA 90 bp | GTATGGGAAAACACTGGAGTGGTGAAGGAAGACTTGAAGGGGGTCACAGAGGAGCTCCGAAGAGACAAATaGCTCGTGAACCCGCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: VWENTGVVKEDLKGVTEELRRDK*LVNPQF Trigger: GAACTGCGGGTTCACGAGCCATTTGTCTCTTCGGAG...CTCCTCTGTGACCCCCTTCAAGTCTTCCTTCACCACTCCAGTGTTTTCCCATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR-3UTR TCA 90 bp | AAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGGGACTGCAGATCTGGACATaGGTGACAAGAGTGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KCFTSIFQRGLEPGLGQGLQIWT*VTRVEP Trigger: TGGCTCCACTCTTGTCACTCATGTCCAGATCTGCAG...TCCCTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR-3UTR TCA 90 bp | AAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGGGAGGTGTAGACCAACAGTaGTGGGTACAAAAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KCFTSIFQRGLEPGLGQGGVDQQ*WVQKEG Trigger: TCCCTCTTTTTGTACCCATCACTGTTGGTCTACACC...TCCCTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR CAA 90 bp | AGGCATGGAAATGGGAAGGTAGATGAGATGAGCCATATGTTGAATTaGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RHGNGKVDEMSHMLN*SIRDKCFTSIFQRG Trigger: CCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCCATTTCCATGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR CAA 90 bp | GCCTCTAGGCATGGAAATGGGAAGGTAGATGAGATGAGCCATATGTaGAATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ASRHGNGKVDEMSHM*NLSIRDKCFTSIFQ Trigger: CTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCCATTTCCATGCCTAGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR GCA 72 bp | ACAAGAGTGGAGCCAACAGGTCACCAGAGGGCATGGTaGCCAGGGAGTGGGCCAGGAGGTAGTGCCCATTTC | + |
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Preference number: 3 (lower is better) Translates to: TRVEPTGHQRAW*PGSGPGGSAHF Trigger: GAAATGGGCACTACCTCCTGGCCCACTCCCTGGGCACCATGCCCTCTGGTGACCTGTTGGCTCCACTCTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR CCA 72 bp | TTTCCTCACAAGGAGCCCTGGGACCATCCACAGCGCTaGTGTTTTCTGGGCAGCAAGGCTTCCTGGGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: FPHKEPWDHPQR*CFLGSKASWGP Trigger: AGGACCCCAGGAAGCCTTGCTGCCCAGAAAACACCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR CCA 72 bp | AGGAGCCCTGGGACCATCCACAGCGCTGGTGTTTTCTaGGCAGCAAGGCTTCCTGGGGTCCTAATTACTCCT | + |
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Preference number: 3 (lower is better) Translates to: RSPGTIHSAGVF*AARLPGVLITP Trigger: AGGAGTAATTAGGACCCCAGGAAGCCTTGCTGCCCAGAAAACACCAGCGCTGTGGATGGTCCCAGGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR TCA 72 bp | ACCGAGAAGGAGAAGCTGGCACTGCAGATCTGGACATaGGTGACAAGAGTGGAGCCAACAGGTCACCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: TEKEKLALQIWT*VTRVEPTGHQR Trigger: CCTCTGGTGACCTGTTGGCTCCACTCTTGTCACTCATGTCCAGATCTGCAGTGCCAGCTTCTCCTTCTCGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR CCA 72 bp | CCACAGCGCTGGTGTTTTCTGGGCAGCAAGGCTTCCTaGGGTCCTAATTACTCCTTGGGCTTTACCGTGATG | + |
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Preference number: 3 (lower is better) Translates to: PQRWCFLGSKAS*GPNYSLGFTVM Trigger: CATCACGGTAAAGCCCAAGGAGTAATTAGGACCCCAGGAAGCCTTGCTGCCCAGAAAACACCAGCGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR CCA 72 bp | GGAAGGAAATGTTCAAGGTTTCCTCACAAGGAGCCCTaGGACCATCCACAGCGCTGGTGTTTTCTGGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GRKCSRFPHKEP*DHPQRWCFLGS Trigger: GCTGCCCAGAAAACACCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGGAAACCTTGAACATTTCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR TCA 72 bp | AGAAGGAGAAGCTGGCACTGCAGATCTGGACATGAGTaGCAAGAGTGGAGCCAACAGGTCACCAGAGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: RRRSWHCRSGHE*QEWSQQVTRGH Trigger: ATGCCCTCTGGTGACCTGTTGGCTCCACTCTTGTCACTCATGTCCAGATCTGCAGTGCCAGCTTCTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR TCA 72 bp | CTTCCTGGGGTCCTAATTACTCCTTGGGCTTTACCGTaGTGTGATCGCAGACATCTCATAGCTAGCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LPGVLITPWALP*CDRRHLIASSS Trigger: GGAGGAGCTAGCTATGAGATGTCTGCGATCACATCACGGTAAAGCCCAAGGAGTAATTAGGACCCCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR CCA 72 bp | GCAGGGAAAGATACCTTCGAGCAGGGTCGAGTGGTATaGGAAAACACTGGAGTGGTGAAGGAAGACTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: AGKDTFEQGRVV*ENTGVVKEDLK Trigger: CTTCAAGTCTTCCTTCACCACTCCAGTGTTTTCCCATACCACTCGACCCTGCTCGAAGGTATCTTTCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| 3UTR-3UTR CAA 90 bp | AAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGGGATCTGTGGCCTTTAGTTaGAGGACGAGGTTCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: KCFTSIFQRGLEPGLGQGSVAFS*RTRFSF Trigger: GAAAGAGAACCTCGTCCTCAAACTAAAGGCCACAGA...TCCCTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGAGATGAGCCATATGTaGAATTTGAGTATTAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: PEKETPNGASGSSGASRHEMSHM*NLSIRD Trigger: GTCTCTAATACTCAAATTCAACATATGGCTCATCTC...ATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| 3UTR-3UTR CAA 90 bp | ATTCATAACTCTTTCAGGTCTTACATTCTTCTAGAAGGCAGGACTGTTGGCCAAGTGGTGAAGGAAGACTaGAAGGGGGTCACAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: IHNSFRSYILLEGRTVGQVVKED*KGVTEE Trigger: CTCCTCTGTGACCCCCTTCAAGTCTTCCTTCACCAC...TTGGCCAACAGTCCTGCCTTCTAGAAGAATGTAAGACCTGAAAGAGTTATGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR CCA 90 bp | AGCCTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCGGTCACCAGAGGGCATaGTGCCCAGGGAGTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLRRKHPTVLVVVVGPLGGHQRA*CPGSGP Trigger: TGGCCCACTCCCTGGGCACCATGCCCTCTGGTGACC...GCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR CCA 90 bp | GCTGGCACTGCAGATCTGGACATGAGTGACAAGAGTGGAGCCAACAGGTCACCAGGTCACCAGAGGGCATaGTGCCCAGGGAGTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AGTADLDMSDKSGANRSPGHQRA*CPGSGP Trigger: TGGCCCACTCCCTGGGCACCATGCCCTCTGGTGACC...TGGTGACCTGTTGGCTCCACTCTTGTCACTCATGTCCAGATCTGCAGTGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR TCA 90 bp | CCTCACAAGGAGCCCTGGGACCATCCACAGCGCTGGTGTTTTCTGGGCAGCAAGGAGACAAATGGCTCGTaGACCCGCAGTTCTTCAACA | + |
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Preference number: 4 (lower is better) Translates to: PHKEPWDHPQRWCFLGSKETNGS*TRSSST Trigger: TGTTGAAGAACTGCGGGTTCACGAGCCATTTGTCTC...CTTGCTGCCCAGAAAACACCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR CCA 90 bp | CTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGCTGGGTTCCTTGACATaGCTGGAACTGGCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LRRKHPTVLVVVVGPLGMLGSLT*LELAGS Trigger: GCTCCCAGCCAGTTCCAGCCATGTCAAGGAACCCAG...CATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATATGGCTGGAACTGGCTaGGAGCTGACAAGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PEKETPNGASGSSGASRHMAGTG*ELTSWV Trigger: GACCCAACTTGTCAGCTCCCAGCCAGTTCCAGCCAT...ATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR TCA 90 bp | GATCTGGACATGAGTGACAAGAGTGGAGCCAACAGGTCACCAGAGGGCATGGTGGAACTGGCTGGGAGCTaGCAAGTTGGGTCATGTATG | + |
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Preference number: 4 (lower is better) Translates to: DLDMSDKSGANRSPEGMVELAGS*QVGSCM Trigger: CATACATGACCCAACTTGTCAGCTCCCAGCCAGTTC...CACCATGCCCTCTGGTGACCTGTTGGCTCCACTCTTGTCACTCATGTCCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR TCA 90 bp | GTGGGCCAGGAGGTAGTGCCCATTTCTGTGGCCTTTAGTTTGAGGACGAGGTTCCTGCAGATCTGGACATaGGTGACAAGAGTGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VGQEVVPISVAFSLRTRFLQIWT*VTRVEP Trigger: TGGCTCCACTCTTGTCACTCATGTCCAGATCTGCAG...GAACCTCGTCCTCAAACTAAAGGCCACAGAAATGGGCACTACCTCCTGGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR CCA 90 bp | CTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGCTCCGAAGAGACAAATaGCTCGTGAACCCGCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LRRKHPTVLVVVVGPLGMLRRDK*LVNPQF Trigger: GAACTGCGGGTTCACGAGCCATTTGTCTCTTCGGAG...CATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGCAGCAAGGCTTCCTaGGGTCCTAATTACTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PEKETPNGASGSSGASRHGSKAS*GPNYSL Trigger: CAAGGAGTAATTAGGACCCCAGGAAGCCTTGCTGCC...ATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR TCA 90 bp | GGAAATGTTCAAGGTTTCCTCACAAGGAGCCCTGGGACCATCCACAGCGCTGGTTCTCTGCCATCCTGTTaGAGATCCTCTCGAACCATC | + |
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Preference number: 4 (lower is better) Translates to: GNVQGFLTRSPGTIHSAGSLPSC*RSSRTI Trigger: GATGGTTCGAGAGGATCTTCAACAGGATGGCAGAGA...ACCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGGAAACCTTGAACATTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR TCA 90 bp | CCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAAGGTATCTCTGCCATCCTGTTaGAGATCCTCTCGAACCATC | + |
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Preference number: 4 (lower is better) Translates to: PNGASGSSGASRHGNGKVSLPSC*RSSRTI Trigger: GATGGTTCGAGAGGATCTTCAACAGGATGGCAGAGA...TACCTTCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR TCA 90 bp | CCTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATTGTAGAATCAGAGCCTaGGAAGGAAACACCCAACGG | + |
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Preference number: 4 (lower is better) Translates to: PEKETPNGASGSSGASRHCRIRA*EGNTQR Trigger: CCGTTGGGTGTTTCCTTCTCAGGCTCTGATTCTACA...ATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR CCA 90 bp | GACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGACCTCGCTCCACGCATaGGGAGATCAGGGTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: DKCFTSIFQRGLEPGLGQTSLHA*GDQGST Trigger: TGTGGAACCCTGATCTCCCCATGCGTGGAGCGAGGT...CTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAAGGAAATGTTCAAGGTTTCCTCACAAGGAGCCCTGGGACCATCCACAGTCGAGCAGGGTCGAGTaGTATGGGAAAACACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGRKCSRFPHKEPWDHPQSSRVE*YGKTLE Trigger: CTCCAGTGTTTTCCCATACCACTCGACCCTGCTCGA...CTGTGGATGGTCCCAGGGCTCCTTGTGAGGAAACCTTGAACATTTCCTTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR TCA 90 bp | GTGGGCCAGGAGGTAGTGCCCATTTCTGTGGCCTTTAGTTTGAGGACGAGGTTCGGTGTAGACCAACAGTaGTGGGTACAAAAAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: VGQEVVPISVAFSLRTRFGVDQQ*WVQKEG Trigger: TCCCTCTTTTTGTACCCATCACTGTTGGTCTACACC...GAACCTCGTCCTCAAACTAAAGGCCACAGAAATGGGCACTACCTCCTGGCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR TCA 90 bp | AAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGATGTAGAATCAGAGCCTaGGAAGGAAACACCCAACGG | + |
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Preference number: 4 (lower is better) Translates to: KHPTVLVVVVGPLGMEMGCRIRA*EGNTQR Trigger: CCGTTGGGTGTTTCCTTCTCAGGCTCTGATTCTACA...TCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR TCA 90 bp | GATCTGGACATGAGTGACAAGAGTGGAGCCAACAGGTCACCAGAGGGCATGGTGTCTCGAACCATCCTATaGTCAATGTTGTCCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: DLDMSDKSGANRSPEGMVSRTIL*SMLSPM Trigger: CATTGGGGACAACATTGATCATAGGATGGTTCGAGA...CACCATGCCCTCTGGTGACCTGTTGGCTCCACTCTTGTCACTCATGTCCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR TCA 90 bp | TGTTTTCTGGGCAGCAAGGCTTCCTGGGGTCCTAATTACTCCTTGGGCTTTACCGGCTTTACCGTGATGTaGTCGCAGACATCTCATAGC | + |
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Preference number: 4 (lower is better) Translates to: CFLGSKASWGPNYSLGFTGFTVM*SQTSHS Trigger: GCTATGAGATGTCTGCGATCACATCACGGTAAAGCC...GGTAAAGCCCAAGGAGTAATTAGGACCCCAGGAAGCCTTGCTGCCCAGAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR TCA 90 bp | AGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAACTGTGGCCTTTAGTTTaGGGACGAGGTTCTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RRKHPTVLVVVVGPLGMELWPLV*GRGSLS Trigger: TGAAAGAGAACCTCGTCCTCAAACTAAAGGCCACAG...TTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR GCA 90 bp | ATTCATAACTCTTTCAGGTCTTACATTCTTCTAGAAGGCAGGACTGTTGGCCAACACCAGAGGGCATGGTaGCCAGGGAGTGGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IHNSFRSYILLEGRTVGQHQRAW*PGSGPG Trigger: TCCTGGCCCACTCCCTGGGCACCATGCCCTCTGGTG...TTGGCCAACAGTCCTGCCTTCTAGAAGAATGTAAGACCTGAAAGAGTTATGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS-3UTR CCA 90 bp | CCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAAGGTAGGTATGGGAAAACACTaGAGTGGTGAAGGAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: PNGASGSSGASRHGNGKVGMGKH*SGEGRL Trigger: AAGTCTTCCTTCACCACTCCAGTGTTTTCCCATACC...TACCTTCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
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| CDS-3UTR TCA 90 bp | AAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAATGCCTAAAAGAGGATaGCAGAGCAGGGAAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: KHPTVLVVVVGPLGMEMGMPKRG*QSRERY Trigger: GTATCTTTCCCTGCTCTGTCATCCTCTTTTAGGCAT...TCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR GCA 90 bp | GGAAATGTTCAAGGTTTCCTCACAAGGAGCCCTGGGACCATCCACAGCGCTGGTATAATTGAGAGGGTATaGGCAACTCAGAAAAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GNVQGFLTRSPGTIHSAGIIERV*ATQKSA Trigger: CGCACTTTTCTGAGTTGCGCATACCCTCTCAATTAT...ACCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGGAAACCTTGAACATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR GCA 90 bp | TGTTTTCTGGGCAGCAAGGCTTCCTGGGGTCCTAATTACTCCTTGGGCTTTACCGATGCTTCTGAACAATaGTATGCTCCTTGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFLGSKASWGPNYSLGFTDASEQ*YAPWAE Trigger: CTCAGCCCAAGGAGCATAGCATTGTTCAGAAGCATC...GGTAAAGCCCAAGGAGTAATTAGGACCCCAGGAAGCCTTGCTGCCCAGAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CCA 90 bp | AAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAGGTATGGGAAAACACTaGAGTGGTGAAGGAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KHPTVLVVVVGPLGMEMGGMGKH*SGEGRL Trigger: AAGTCTTCCTTCACCACTCCAGTGTTTTCCCATACC...TCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR TCA 90 bp | AAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAGCAACCTTTAATAATTaGGAGGGTATGCGCAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHPTVLVVVVGPLGMEMGATFNN*EGMRNS Trigger: TGAGTTGCGCATACCCTCTCAATTATTAAAGGTTGC...TCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | CCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAAGGTAAAATGGGAAGGTAGATaGGATGAGCCATATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PNGASGSSGASRHGNGKVKWEGR*DEPYVE Trigger: TTCAACATATGGCTCATCTCATCTACCTTCCCATTT...TACCTTCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGTAGATGAGATGAGCCATATGTTGAATTTGAGTATTAGAGACAAATGTCACCAGAGGGCATGGTaGCCAGGGAGTGGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKVDEMSHMLNLSIRDKCHQRAW*PGSGPG Trigger: TCCTGGCCCACTCCCTGGGCACCATGCCCTCTGGTG...ACATTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAGGTCTTACATTCTTCTAGAAGGCAGGACTGTTGGCCAAGGACTAAGCAGAAGGCAGGACTGTTaGCCAAGGACTAAGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFRSYILLEGRTVGQGLSRRQDC*PRTKHS Trigger: GGAGTGCTTAGTCCTTGGCCAACAGTCCTGCCTTCT...GCTTAGTCCTTGGCCAACAGTCCTGCCTTCTAGAAGAATGTAAGACCTGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | AAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAAAATGGGAAGGTAGATaGGATGAGCCATATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHPTVLVVVVGPLGMEMGKWEGR*DEPYVE Trigger: TTCAACATATGGCTCATCTCATCTACCTTCCCATTT...TCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR GCA 90 bp | AAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGGGAGATCTAGTGCATCTCTaGCATCCTGTTGAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCFTSIFQRGLEPGLGQGDLVHL*HPVEDP Trigger: AGGATCTTCAACAGGATGGCAGAGATGCACTAGATC...TCCCTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAGGAAATGTTCAAGGTTTCCTCACAAGGAGCCCTGGGACCATCCACAGGATTTTAAGCAGGCATaGCTAAAAGAGGATGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRKCSRFPHKEPWDHPQDFKQA*LKEDDR Trigger: TCTGTCATCCTCTTTTAGGCATGCCTGCTTAAAATC...CTGTGGATGGTCCCAGGGCTCCTTGTGAGGAAACCTTGAACATTTCCTTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | AATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGGAAAAGTGCGCCCGCTaGGGTTGGGTGCAGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLSIRDKCFTSIFQRGLEEKCAR*GWVQSG Trigger: TCCACTCTGCACCCAACCTCAGCGGGCGCACTTTTC...CTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR GCA 90 bp | CCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAAGGTAAAGTTGGGTCATGTATaGCTTCTGAAAACTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PNGASGSSGASRHGNGKVKLGHV*LLKTVF Trigger: AAATACAGTTTTCAGAAGGCATACATGACCCAACTT...TACCTTCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CCA 90 bp | AATGGGAAGGTAGATGAGATGAGCCATATGTTGAATTTGAGTATTAGAGACAAACCTCACAAGGAGCCCTaGGACCATCCACAGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGKVDEMSHMLNLSIRDKPHKEP*DHPQRW Trigger: CCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGG...TTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTGGGCAGCAAGGCTTCCTGGGGTCCTAATTACTCCTTGGGCTTTACCTGGAGGTTCTCTTCATaGAACTCAGTATTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFLGSKASWGPNYSLGFTWRFSS*NSVFEK Trigger: TTTCTCAAATACTGAGTTTCATGAAGAGAACCTCCA...GGTAAAGCCCAAGGAGTAATTAGGACCCCAGGAAGCCTTGCTGCCCAGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | TCTTTCAGGTCTTACATTCTTCTAGAAGGCAGGACTGTTGGCCAAGGACTAAGCTCTCGAACCATCCTATaGTCAATGTTGTCCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SFRSYILLEGRTVGQGLSSRTIL*SMLSPM Trigger: CATTGGGGACAACATTGATCATAGGATGGTTCGAGA...GCTTAGTCCTTGGCCAACAGTCCTGCCTTCTAGAAGAATGTAAGACCTGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGTAGATGAGATGAGCCATATGTTGAATTTGAGTATTAGAGACAAATGTAGCGCTGGTGTTTTCTaGGCAGCAAGGCTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKVDEMSHMLNLSIRDKCSAGVF*AARLPG Trigger: CCCAGGAAGCCTTGCTGCCCAGAAAACACCAGCGCT...ACATTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | GACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGAAATGCAGCAACACCTaGACTCTTCTAAAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKCFTSIFQRGLEPGLGQKCSNT*TLLKKK Trigger: CTTTTTCTTTAGAAGAGTTCAGGTGTTGCTGCATTT...CTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR CCA 90 bp | GACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGTGTTACTTTGGGAGATaGATTGAGAACTTCTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DKCFTSIFQRGLEPGLGQCYFGR*IENFFS Trigger: ACTAAAGAAGTTCTCAATCCATCTCCCAAAGTAACA...CTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTGAATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGGATGATCTGGGTTCCTTaGCATGGCTGGAACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLNLSIRDKCFTSIFQRGMIWVP*HGWNWL Trigger: CAGCCAGTTCCAGCCATGTCAAGGAACCCAGATCAT...CCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | GATGAGATGAGCCATATGTTGAATTTGAGTATTAGAGACAAATGTTTCACTTCGCCTTGGGCTTTACCGTaGTGTGATCGCAGACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DEMSHMLNLSIRDKCFTSPWALP*CDRRHL Trigger: GAGATGTCTGCGATCACATCACGGTAAAGCCCAAGG...CGAAGTGAAACATTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR TCA 90 bp | TTGAATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGCTGCAGATCTGGACATaGGTGACAAGAGTGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLSIRDKCFTSIFQRGLLQIWT*VTRVEP Trigger: TGGCTCCACTCTTGTCACTCATGTCCAGATCTGCAG...CAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR TCA 90 bp | TTGAATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGAGATCTGGACATGAGTaGCAAGAGTGGAGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LNLSIRDKCFTSIFQRGLRSGHE*QEWSQQ Trigger: CTGTTGGCTCCACTCTTGTCACTCATGTCCAGATCT...CAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR TCA 90 bp | AATGGGAAGGTAGATGAGATGAGCCATATGTTGAATTTGAGTATTAGAGACAAAAGATCTGGACATGAGTaGCAAGAGTGGAGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NGKVDEMSHMLNLSIRDKRSGHE*QEWSQQ Trigger: CTGTTGGCTCCACTCTTGTCACTCATGTCCAGATCT...TTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR TCA 90 bp | TTGAATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGCTGTGGCCTTTAGTTTaGGGACGAGGTTCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLSIRDKCFTSIFQRGLLWPLV*GRGSLS Trigger: TGAAAGAGAACCTCGTCCTCAAACTAAAGGCCACAG...CAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| 3UTR CAA 72 bp | CATGGAAATGGGAAGGTAGATGAGATGAGCCATATGTaGAATTTGAGTATTAGAGACAAATGTTTCACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HGNGKVDEMSHM*NLSIRDKCFTS Trigger: CGAAGTGAAACATTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCCATTTCCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGTAGATGAGATGAGCCATATGTTGAATTTGAGTATTAGAGACAAATGTAAATGCAGCAACACCTaGACTCTTCTAAAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKVDEMSHMLNLSIRDKCKCSNT*TLLKKK Trigger: CTTTTTCTTTAGAAGAGTTCAGGTGTTGCTGCATTT...ACATTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR CCA 90 bp | ATGTTGAATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGGGTTCTCTTTCATTCCTaGAAGGAAATGTTCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLNLSIRDKCFTSIFQRGVLFHS*KEMFKV Trigger: AACCTTGAACATTTCCTTCCAGGAATGAAAGAGAAC...CCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| 3UTR CAA 72 bp | AATGGGAAGGTAGATGAGATGAGCCATATGTTGAATTaGAGTATTAGAGACAAATGTTTCACTTCGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGKVDEMSHMLN*SIRDKCFTSIF Trigger: GAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAACATATGGCTCATCTCATCTACCTTCCCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR GCA 90 bp | TTGAATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGTTAACCACAGTGATTTaGAACAATGTGTTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLSIRDKCFTSIFQRGLLTTVI*NNVLLW Trigger: CCAAAGTAACACATTGTTGCAAATCACTGTGGTTAA...CAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CAA 90 bp | CCTCACAAGGAGCCCTGGGACCATCCACAGCGCTGGTGTTTTCTGGGCAGCAAGCTGGGAGCTGACAAGTaGGGTCATGTATGCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PHKEPWDHPQRWCFLGSKLGADK*GHVCLL Trigger: CAGAAGGCATACATGACCCAACTTGTCAGCTCCCAG...CTTGCTGCCCAGAAAACACCAGCGCTGTGGATGGTCCCAGGGCTCCTTGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGTGGTGAAGGAAGACTaGAAGGGGGTCACAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRRKHPTVLVVVVGPLGMVVKED*KGVTEE Trigger: CTCCTCTGTGACCCCCTTCAAGTCTTCCTTCACCAC...CATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR CAA 90 bp | AGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAATATGATCTGGGTTCCTaGACATGGCTGGAACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRKHPTVLVVVVGPLGMEYDLGS*TWLELA Trigger: AGCCAGTTCCAGCCATGTCAAGGAACCCAGATCATA...TTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGTCTGTGGCCTTTAGTTaGAGGACGAGGTTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRRKHPTVLVVVVGPLGMSVAFS*RTRFSF Trigger: GAAAGAGAACCTCGTCCTCAAACTAAAGGCCACAGA...CATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR CAA 90 bp | GACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGGTGGTGAAGGAAGACTaGAAGGGGGTCACAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DKCFTSIFQRGLEPGLGQVVKED*KGVTEE Trigger: CTCCTCTGTGACCCCCTTCAAGTCTTCCTTCACCAC...CTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAGGAAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGCAACAATGTGTTACTTaGGGAGATGGATTGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LRRKHPTVLVVVVGPLGMQQCVT*GDGLRT Trigger: AGTTCTCAATCCATCTCCCAAAGTAACACATTGTTG...CATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTTCCTTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGGGAATCTCTGCCATCCTGTaGAAGATCCTCTCGAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: KCFTSIFQRGLEPGLGQGISAIL*KILSNH Trigger: ATGGTTCGAGAGGATCTTCAACAGGATGGCAGAGAT...TCCCTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR CAA 90 bp | AAATGTTTCACTTCGATTTTCCAGAGAGGGTTGGAGCCAGGATTGGGGCAGGGATTTTCCCCCTTTCTTTaGGCCAGAATGTATATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KCFTSIFQRGLEPGLGQGFSPFL*ARMYIQ Trigger: CTGGATATACATTCTGGCCAAAAGAAAGGGGGAAAA...TCCCTGCCCCAATCCTGGCTCCAACCCTCTCTGGAAAATCGAAGTGAAACATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CAA 90 bp | AAACACCCAACGGTGCTAGTGGTAGTAGTGGGGCCTCTAGGCATGGAAATGGGAACAGAACTTGACCACTaGACCTTTACTTTCCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KHPTVLVVVVGPLGMEMGTELDH*TFTFLL Trigger: TAAAAGGAAAGTAAAGGTCAAGTGGTCAAGTTCTGT...TCCCATTTCCATGCCTAGAGGCCCCACTACTACCACTAGCACCGTTGGGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS TCA 90 bp | GATTATGATCTGGGTTCCTTGACATGGCTGGAACTGGCTGGGAGCTaGCAAGTTGGGTCATGTATGCCTTCTGAAAACTGTATTTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: DYDLGSLTWLELAGS*QVGSCMPSENCILT Trigger: GGTTAAAATACAGTTTTCAGAAGGCATACATGACCCAACTTGTCAGCTCCCAGCCAGTTCCAGCCATGTCAAGGAACCCAGATCATAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CAA 90 bp | GTATGGGAAAACACTGGAGTGGTGAAGGAAGACTTGAAGGGGGTCACAGAGGAGGAGATGAGCCATATGTaGAATTTGAGTATTAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VWENTGVVKEDLKGVTEEEMSHM*NLSIRD Trigger: GTCTCTAATACTCAAATTCAACATATGGCTCATCTC...CTCCTCTGTGACCCCCTTCAAGTCTTCCTTCACCACTCCAGTGTTTTCCCATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS GCA 90 bp | TGGCCAACTTGTGAATTATTTCCTCCTGGTGATGCTTCTGAACAATaGTATGCTCCTTGGGCTGAGAAAGTAGATTATGATCTGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPTCELFPPGDASEQ*YAPWAEKVDYDLGS Trigger: GGAACCCAGATCATAATCTACTTTCTCAGCCCAAGGAGCATAGCATTGTTCAGAAGCATCACCAGGAGGAAATAATTCACAAGTTGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
||
| CDS-3UTR CAA 90 bp | GTAAATGTTGTAGAATCAGAGCCTGAGAAGGAAACACCCAACGGTGCTAGTGGTGAGATGAGCCATATGTaGAATTTGAGTATTAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VNVVESEPEKETPNGASGEMSHM*NLSIRD Trigger: GTCTCTAATACTCAAATTCAACATATGGCTCATCTC...ACCACTAGCACCGTTGGGTGTTTCCTTCTCAGGCTCTGATTCTACAACATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS-3UTR CAA 90 bp | TTGAATTTGAGTATTAGAGACAAATGTTTCACTTCGATTTTCCAGAGAGGGTTGTCTGTGGCCTTTAGTTaGAGGACGAGGTTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNLSIRDKCFTSIFQRGLSVAFS*RTRFSF Trigger: GAAAGAGAACCTCGTCCTCAAACTAAAGGCCACAGA...CAACCCTCTCTGGAAAATCGAAGTGAAACATTTGTCTCTAATACTCAAATTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454782.3 ENST00000619547.1 |
||
| CDS TCA 72 bp | CTGGGTTCCTTGACATGGCTGGAACTGGCTGGGAGCTaGCAAGTTGGGTCATGTATGCCTTCTGAAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: LGSLTWLELAGS*QVGSCMPSENC Trigger: ACAGTTTTCAGAAGGCATACATGACCCAACTTGTCAGCTCCCAGCCAGTTCCAGCCATGTCAAGGAACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS CCA 72 bp | ATTCTTACTACGCTACCTCCAACCTCGCTCCACGCATaGGGAGATCAGGGTTCCACATTTTCGGGTAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ILTTLPPTSLHA*GDQGSTFSGKH Trigger: ATGCTTACCCGAAAATGTGGAACCCTGATCTCCCCATGCGTGGAGCGAGGTTGGAGGTAGCGTAGTAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS GCA 72 bp | CTTTTCCGTCTGCAACCTTTAATAATTGAGAGGGTATaGGCAACTCAGAAAAGTGCGCCCGCTGAGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LFRLQPLIIERV*ATQKSAPAEVG Trigger: CCCAACCTCAGCGGGCGCACTTTTCTGAGTTGCGCATACCCTCTCAATTATTAAAGGTTGCAGACGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS CAA 72 bp | GGCCAGGAGGTAGTGCCCATTTCTGTGGCCTTTAGTTaGAGGACGAGGTTCTCTTTCATTCCTTTTACAGCA | + |
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Preference number: 6 (lower is better) Translates to: GQEVVPISVAFS*RTRFSFIPFTA Trigger: TGCTGTAAAAGGAATGAAAGAGAACCTCGTCCTCAAACTAAAGGCCACAGAAATGGGCACTACCTCCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619547.1 |
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| CDS TCA 72 bp | AAACTACTAACTTTTCCGTCTGCAACCTTTAATAATTaGGAGGGTATGCGCAACTCAGAAAAGTGCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: KLLTFPSATFNN*EGMRNSEKCAR Trigger: GCGGGCGCACTTTTCTGAGTTGCGCATACCCTCTCAATTATTAAAGGTTGCAGACGGAAAAGTTAGTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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| CDS GCA 72 bp | TGTGAATTATTTCCTCCTGGTGATGCTTCTGAACAATaGTATGCTCCTTGGGCTGAGAAAGTAGATTATGAT | + |
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Preference number: 6 (lower is better) Translates to: CELFPPGDASEQ*YAPWAEKVDYD Trigger: ATCATAATCTACTTTCTCAGCCCAAGGAGCATAGCATTGTTCAGAAGCATCACCAGGAGGAAATAATTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454782.3 |
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