RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PXN (Homo sapiens)

Ensembl gene IDs: ENSG00000089159

Ensembl transcript IDs: ENST00000228307.11, ENST00000267257.11, ENST00000323871.9, ENST00000424649.6, ENST00000440827.3, ENST00000458477.6, ENST00000536957.5, ENST00000538144.5, ENST00000540221.1, ENST00000543331.1, ENST00000546532.5, ENST00000547746.1, ENST00000547772.1, ENST00000547983.5, ENST00000548912.5, ENST00000550205.1, ENST00000551327.5, ENST00000552550.5, ENST00000637617.2, ENST00000637624.1

Found 1635 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTGTTGGGTGGAGGTGACGCGCTGCGGGCTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGGACGGGGCTGGGCACGGAGCTCTCC +
Preference number: 1 (lower is better)
Translates to: CCWVEVTRCGLLISP*FTVMAGTGLGTELS
Trigger: GGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR GCA 90 bp ACTCCTTTGGCGACTGTGGCGACCCCCAGCTTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTGTCCAGCTGGCTCCCGGGCTTCGGG +
Preference number: 1 (lower is better)
Translates to: TPLATVATPSLFRSD*RLPSMLSSWLPGFG
Trigger: CCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR GCA 90 bp GAGGAGGCCGAGATGCGTGTCTGCTGTTGGGTGGAGGTGACGCGCTaGGGGCTGCTCATCTCGCCCTGGTTCACAGTGATGGCAGGGACG +
Preference number: 1 (lower is better)
Translates to: EEAEMRVCCWVEVTR*GLLISPWFTVMAGT
Trigger: CGTCCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 90 bp CAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCAGCTTGTTCAGGTCAGACTGCAGGC +
Preference number: 1 (lower is better)
Translates to: QPARRWASCRPRRLL*RLWRPPACSGQTAG
Trigger: GCCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR GCA 90 bp AAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCG +
Preference number: 1 (lower is better)
Translates to: KFRDPISSWQWVQTK*SGCHVFPMAVTTCP
Trigger: CGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CCA 90 bp CCCCCGGCTGCACTGCTGAAATATGAGGAAGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGTTCGTGGGGACGTACATGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: PPAALLKYEEEMAPV*GAGQASSWGRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCAGCCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 90 bp GGAGCCCGGGGCAGTACTGAGGACCAGTCGAGGAAGGAGCAGACATaGGTGGACCCACAGAAAAGCAAGAGGGCAGCGGACCTTCTGCAT +
Preference number: 1 (lower is better)
Translates to: GARGSTEDQSRKEQT*VDPQKSKRAADLLH
Trigger: ATGCAGAAGGTCCGCTGCCCTCTTGCTTTTCTGTGGGTCCACCCATGTCTGCTCCTTCCTCGACTGGTCCTCAGTACTGCCCCGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR TCA 90 bp TTCCCGGCACACAAAGCACTCAGGATGCCACAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGATGGCCCGGGCGCAGCCGCCACACTT +
Preference number: 1 (lower is better)
Translates to: FPAHKALRMPQRVEG*DIVLQDGPGAAATL
Trigger: AAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR TCA 90 bp CCTTCTGGAGTGGCTTCTTTCCTCGATGGGAGCCCGGGGCAGTACTaGGGACCAGTCGAGGAAGGAGCAGACATGGGTGGACCCACAGAA +
Preference number: 1 (lower is better)
Translates to: PSGVASFLDGSPGQY*GPVEEGADMGGPTE
Trigger: TTCTGTGGGTCCACCCATGTCTGCTCCTTCCTCGACTGGTCCTCAGTACTGCCCCGGGCTCCCATCGAGGAAAGAAGCCACTCCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR TCA 90 bp TGCTCCTCCTCACCCACTCGGGAGCACGGAGAGCCAACACTGTCCTaGGGGTTGGAGACACTGGAAGTTTTGGCACTGGAGCCGTACACA +
Preference number: 1 (lower is better)
Translates to: CSSSPTREHGEPTLS*GLETLEVLALEPYT
Trigger: TGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGTGGGTGAGGAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 90 bp CTGAGATATAGTTCTCCAGGATGGCCCGGGCGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGTAGTCCTTGCGACAGTAGGCCTTGC +
Preference number: 1 (lower is better)
Translates to: LRYSSPGWPGRSRHT*VRTCRSSPCDSRPC
Trigger: GCAAGGCCTACTGTCGCAAGGACTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CCA 90 bp CCTCACCCACTCGGGAGCACGGAGAGCCAACACTGTCCTGAGGGTTaGAGACACTGGAAGTTTTGGCACTGGAGCCGTACACAGGTGATG +
Preference number: 1 (lower is better)
Translates to: PHPLGSTESQHCPEG*RHWKFWHWSRTQVM
Trigger: CATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGTGGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR GCA 90 bp CCAGCAGCAGGCGGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAGGCTCAGCTGATTTCTGCTTGTTGG +
Preference number: 1 (lower is better)
Translates to: PAAGGRVQKGCCPGT*SLRWVKAQLISACW
Trigger: CCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR GCA 90 bp CAGCGTTCAGTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTACGGTGGGTGAAGGCTCAGCTGATT +
Preference number: 1 (lower is better)
Translates to: QRSVPAAGGRVQKGC*PGTCSLRWVKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 90 bp CTCGGGAGCACGGAGAGCCAACACTGTCCTGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGCCGTACACAGGTGATGAGGACTGAG +
Preference number: 1 (lower is better)
Translates to: LGSTESQHCPEGWRH*KFWHWSRTQVMRTE
Trigger: CTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 90 bp ACGGAGAGCCAACACTGTCCTGAGGGTTGGAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAGGTGATGAGGACTGAGGCTGCTGGT +
Preference number: 1 (lower is better)
Translates to: TESQHCPEGWRHWKF*HWSRTQVMRTEAAG
Trigger: ACCAGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR TCA 90 bp AGATCTAGGGTGGGTCACTATAAACAGAGCGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACCTTTGGAGGGGCTGGGCTGACCTTC +
Preference number: 1 (lower is better)
Translates to: RSRVGHYKQSGKACG*KWRHQTFGGAGLTF
Trigger: GAAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACCGCTCTGTTTATAGTGACCCACCCTAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 90 bp GGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATaGCCCCTTTGGTTCTCTGCCTTTGGATGGATGGATTTATGCTGG +
Preference number: 1 (lower is better)
Translates to: GLGHWKGRRSTENLP*PLWFSAFGWMDLCW
Trigger: CCAGCATAAATCCATCCATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 90 bp GTACGGTGTCTGGCAGCACAGGGATGGGGGTACTTTTCTCCCTCCTaGACAGATGAGCTGATGGAGACAAGAAGTACAACCTCCTCCAGG +
Preference number: 1 (lower is better)
Translates to: VRCLAAQGWGYFSPS*TDELMETRSTTSSR
Trigger: CCTGGAGGAGGTTGTACTTCTTGTCTCCATCAGCTCATCTGTCCAGGAGGGAGAAAAGTACCCCCATCCCTGTGCTGCCAGACACCGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR CCA 90 bp GGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATTTCTGCTTGTTGGGGAAGCTGTAGA +
Preference number: 1 (lower is better)
Translates to: GRVQKGCCPGTCSLR*VKAQLISACWGSCR
Trigger: TCTACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 90 bp CCATGGCCCCTTTGGTTCTCTGCCTTTGGATGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCCGGGTGTCCCCCAATAATCACAGAA +
Preference number: 1 (lower is better)
Translates to: PWPLWFSAFGWMDLC*HCLEGAGCPPIITE
Trigger: TTCTGTGATTATTGGGGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAACCAAAGGGGCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR TCA 90 bp CCAACCCTCAGTACAAAGCAAACTTCACACCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGA +
Preference number: 1 (lower is better)
Translates to: PTLSTKQTSHQSHHQ*QAQWRWMRKRIQKG
Trigger: TCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTGGTGTGAAGTTTGCTTTGTACTGAGGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR TCA 90 bp AAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCTGGAGAGGCTTTTCTCAGTAGAACA +
Preference number: 1 (lower is better)
Translates to: KSVQCPGTPSRRRRK*LENIIAGEAFLSRT
Trigger: TGTTCTACTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR TCA 90 bp ATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAG +
Preference number: 1 (lower is better)
Translates to: ICPEEINKTKETSES*WPKSDTSFPEKAEE
Trigger: CTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 90 bp GGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTTCCAAATACAGCAGTTTATAAAACA +
Preference number: 1 (lower is better)
Translates to: GCNTLQPVSVKSLLA*EVKKGFPNTAVYKT
Trigger: TGTTTTATAAACTGCTGTATTTGGAAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTTCTCAGCCCACAGGGGTaGCGGGACCTCCCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: GLLAGPADSFGDCGDPQLLSPQG*RDLPRL
Trigger: GAGCCTGGGGAGGTCCCGCCACCCCTGTGGGCTGAG...AAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp CAAGAGACTCTCCACACTGGGCCGCACGTCCTCCAGGCCCCGGCCCCCATTCCGGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: QETLHTGPHVLQAPAPIPEAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...CGGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTCAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 2 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACACAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGCAGGGGAGAAGAGCTaGTGGCCGCGGCGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPAGEKS*WPRRLC
Trigger: GCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGC...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCTCAGCCCACAGGGGTaGCGGGACCTCCCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRLSPQG*RDLPRL
Trigger: GAGCCTGGGGAGGTCCCGCCACCCCTGTGGGCTGAG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CAA 90 bp ACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCCAGCTTGTTCAGGTCAGACTGCAGG +
Preference number: 2 (lower is better)
Translates to: TTCPAMGFLQAPQTP*ATVATPSLFRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGTGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 2 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGCCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCACCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACACTCCCTGTCTTCCCCTaGGCCATGAACCCTCCCTCG +
Preference number: 2 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTLPVFP*AMNPPS
Trigger: CGAGGGAGGGTTCATGGCCCAGGGGAAGACAGGGAG...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
3UTR-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGCTGGTCAGGACTCCTaGGGCTCGGGGTACGGTGTC +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWAGQDS*GSGYGV
Trigger: GACACCGTACCCCGAGCCTCAGGAGTCCTGACCAGC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR GCA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAACCCTCCCTCGTCCTaGCCTCCGGGGCTGCTCCGC +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPNPPSS*PPGLLR
Trigger: GCGGAGCAGCCCCGGAGGGCAGGACGAGGGAGGGTT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
3UTR-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATCCCCATCCGCTCTTTaGTCCAGGCCCTGGATCGGG +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSSPSAL*SRPWIG
Trigger: CCCGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCTGTCTTCCCCTGGGCCATGAACTGTGGACACGGAGGGGGCTGGTCAGGACTCAGCCCACGGACCTCATaGTGTGGGGTGCAGGAATGG +
Preference number: 2 (lower is better)
Translates to: PVFPWAMNCGHGGGWSGLSPRTS*CGVQEW
Trigger: CCATTCCTGCACCCCACACCATGAGGTCCGTGGGCT...GAGTCCTGACCAGCCCCCTCCGTGTCCACAGTTCATGGCCCAGGGGAAGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGAGCATGCTGTCCAGCTaGCTCCCGGGCTTCGGGGGC +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWSMLSS*LPGFGG
Trigger: GCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: FPDPLSADPTCERGGADLRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: FPDPLSADPTCERGGADLQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp TGGGGCCGTTGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: WGRCSSSSAGRRGCGSPFAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...AAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GTCCTTGCGACAGTAGGCCTTGCCGTCCTTCTCGTGGAACCCTTCGGGACCAAACCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: VLATVGLAVLLVEPFGTKPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...TTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: FPDPLSADPTCERGGADLSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGGTCCTCATCAGTCTaGCAGCCCACGGACCTCATG +
Preference number: 2 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVGSSSV*QPTDLM
Trigger: CATGAGGTCCGTGGGCTGCCAGACTGATGAGGACCC...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACAGCATGCTGTCCAGCTaGCTCCCGGGCTTCGGGGGC +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDSMLSS*LPGFGG
Trigger: GCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CAAGAGACTCTCCACACTGGGCCGCACGTCCTCCAGGCCCCGGCCCCCATTCCGAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 2 (lower is better)
Translates to: QETLHTGPHVLQAPAPIPRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...CGGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGAGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCATGCGACAGTAGGCCTTaGCGTCCTTCTCGTGGAACC +
Preference number: 2 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPCDSRP*RPSRGT
Trigger: GGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: FPDPLSADPTCERGGADLYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGT +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSRSRHT*VRTCRS
Trigger: ACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACATTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAAAGGAGGGAGAGCGATaGGGAAGAAATCGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSKEGER*GRNRQL
Trigger: GAGCTGGCGATTTCTTCCTCATCGCTCTCCCTCCTT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGAAGGAGGGAGAGCGATaGGGAAGAAATCGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVKEGER*GRNRQL
Trigger: GAGCTGGCGATTTCTTCCTCATCGCTCTCCCTCCTT...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCAGGAGCCCAAGGCCTaGCTCCTCTTTCATCCTTGG +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRQEPKA*LLFHPW
Trigger: CCAAGGATGAAAGAGGAGCCAGGCCTTGGGCTCCTG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGAGGGGAGAAGAGCTGCTaGCCGCGGCGTCTGTGCGAT +
Preference number: 2 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGGEKSC*PRRLCD
Trigger: ATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCC...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGAAGGAGGCGAGCAGGCTaGGCAGGGGAGAAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: RSVQGATSGQGLSPLYPGRRRAG*AGEKSC
Trigger: GCAGCTCTTCTCCCCTGCCCAGCCTGCTCGCCTCCT...TCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGTGCACCCCCTCATCATaGGGCTCTTCCCCTGCACTC +
Preference number: 2 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQCTPSS*GSSPAL
Trigger: GAGTGCAGGGGAAGAGCCCCATGATGAGGGGGTGCA...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGACGGACCTCATGGTGTaGGGTGCAGGAATGGGAAGG +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWTDLMV*GAGMGR
Trigger: CCTTCCCATTCCTGCACCCCACACCATGAGGTCCGT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRLLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACACCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 2 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGGCTTCTTTCCTCGATaGGAGCCCGGGGCAGTACTG +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWGFFPR*EPGAVL
Trigger: CAGTACTGCCCCGGGCTCCCATCGAGGAAAGAAGCC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSSPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTCTTTCCAGACCCCCTaGGTGCCGATCCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPSFQTP*VPIPPV
Trigger: CACAGGTGGGATCGGCACTCAGGGGGTCTGGAAAGA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACC +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVGKACG*KWRHQT
Trigger: GGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTGGCCGCGGCGTCTGTaGGATGCTGGAGCAAAGGGA +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQWPRRL*DAGAKG
Trigger: TCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGACGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTT +
Preference number: 2 (lower is better)
Translates to: RSVQGATSGQGLSPLYPGRRWAS*RPRRLL
Trigger: AAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG...TCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAACCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 2 (lower is better)
Translates to: RLVVLLLEGALVELLEAEPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSTKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp GAGCTCTCCAGTTCATCCAAGAGACTCTCCACACTGGGCCGCACGTCCTCCAGGCGAGTTCAGAAAGGTTaGTGCCCAGGGACGTGCTCA +
Preference number: 2 (lower is better)
Translates to: ELSSSSKRLSTLGRTSSRRVQKG*CPGTCS
Trigger: TGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG...CCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGGCACAGACGAAGTGCTCGTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: LKVPLLSCLRQKAQTKCSYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...CGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCTTGGTAAAGAGCTCTaGGGGGTTTCCCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRLGKEL*GVSPEE
Trigger: CTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GGGAAGCCTGGCGGGTTATGCTGTACAGCGTTCAGTTCCAGCAGCAGGCGGTCGGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGC +
Preference number: 2 (lower is better)
Translates to: GKPGGLCCTAFSSSSRRSEGWRH*KFWHWS
Trigger: GCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTC...CGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CCA 90 bp GGTGGAGGTGACGCGCTGCGGGCTGCTCATCTCGCCCTGGTTCACAGTGATGGCCTGATTTCTGCTTGTTaGGGAAGCTGTAGACGTGCT +
Preference number: 2 (lower is better)
Translates to: GGGDALRAAHLALVHSDGLISAC*GSCRRA
Trigger: AGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAG...GCCATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGTCTCCCTTCTGGAGTaGCTTCTTTCCTCGATGGGA +
Preference number: 2 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPVSLLE*LLSSMG
Trigger: TCCCATCGAGGAAAGAAGCCACTCCAGAAGGGAGAC...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR CAA 90 bp TGTACAGCGTTCAGTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTaGCTGCCCAGGGACGTGCTCATTACGGTGGGTGAAGGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: CTAFSSSSRRSSSER*LPRDVLITVGEGSA
Trigger: AGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSQRVEG*DIVLQD
Trigger: ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCCTAGCAGAAGAGCTTaGGGAAGCAGTTCTGACAGT +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSPSRRA*GSSSDS
Trigger: ACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSLGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTGGGCCTTCCCACTCTaGACCAAGAGTGGGGCCAGT +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVWAFPL*TKSGAS
Trigger: ACTGGCCCCACTCTTGGTGCAGAGTGGGAAGGCCCA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGGGAAGGGCAGGGCCCTaGACCCCCTCATCATGGGGC +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLGRAGP*TPSSWG
Trigger: GCCCCATGATGAGGGGGTGCAGGGCCCTGCCCTTCC...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAACGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTT +
Preference number: 2 (lower is better)
Translates to: RLVVLLLEGALVELLEAERRWAS*RPRRLL
Trigger: AAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGAAGAAGTGTTCAGGGTaGCACGTCCGGTCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: FPDPLSADPTCERGGADLKKCSG*HVRSRA
Trigger: AGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWESSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTTCTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 2 (lower is better)
Translates to: GLLAGPADSFGDCGDPQLLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...AAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCGCGTCTGTGCGATGCTaGAGCAAAGGGACAGAAGGA +
Preference number: 2 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCASVRC*SKGTEG
Trigger: TCCTTCTGTCCCTTTGCTCCAGCATCGCACAGACGC...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTGCACCCCCTCATCATaGGGCTCTTCCCCTGCACTC +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQCTPSS*GSSPAL
Trigger: GAGTGCAGGGGAAGAGCCCCATGATGAGGGGGTGCA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACATCTCCTCCTGGCAGTaGGTGCAGACGAAGTGCTCG +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDISSWQ*VQTKCS
Trigger: CGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGAT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp GGGAAGCCTGGCGGGTTATGCTGTACAGCGTTCAGTTCCAGCAGCAGGCGGTCGACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: GKPGGLCCTAFSSSSRRSTCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...CGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGAGGAGACAGGTTTCTaGTCTCCCTTCTGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWEETGF*SPFWSG
Trigger: GCCACTCCAGAAGGGAGACCAGAAACCTGTCTCCTC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCATGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 2 (lower is better)
Translates to: FPDPLSADPTCERGGADLPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: FPDPLSADPTCERGGADLFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: VRLVVLLLEGALVELLEAMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AGGGACGGGGCTGGGCACGGAGCTCTCCAGTTCATCCAAGAGACTCTCCACACTGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTA +
Preference number: 2 (lower is better)
Translates to: RDGAGHGALQFIQETLHTVQKGC*PGTCSL
Trigger: TAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAAC...AGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTTTTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: GLLAGPADSFGDCGDPQLFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...AAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCTTGGTAAAGAGCTCTaGGGGGTTTCCCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPLGKEL*GVSPEE
Trigger: CTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCAGGAGCCCAAGGCCTaGCTCCTCTTTCATCCTTGG +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVQEPKA*LLFHPW
Trigger: CCAAGGATGAAAGAGGAGCCAGGCCTTGGGCTCCTG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGCTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTTCTTCTCAGGGGAATaGGAGAGCCAGGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVFFSGE*ESQEGR
Trigger: TCTTCCCTCCTGGCTCTCCCATTCCCCTGAGAAGAA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGAAGCCAGGACAGAGATaGTTCTTCTCAGGGGAATGG +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWKPGQR*FFSGEW
Trigger: CCATTCCCCTGAGAAGAACCATCTCTGTCCTGGCTT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGGGGAGAAGAGCTGCTaGCCGCGGCGTCTGTGCGAT +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDGEKSC*PRRLCD
Trigger: ATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGCCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCTGGCAGCACAGGGATaGGGGTACTTTTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVLAAQG*GYFSPS
Trigger: GGAGGGAGAAAAGTACCCCCATCCCTGTGCTGCCAG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR CAA 90 bp GGAGGAGCACAGAGAACCTTCCATGGCCCCTTTGGTTCTCTGCCTTaGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGT +
Preference number: 2 (lower is better)
Translates to: GGAQRTFHGPFGSLP*DGWIYAGIVWREPG
Trigger: ACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGGTTCTCTGTGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPSPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTGGCCGCGGCGTCTGTaGGATGCTGGAGCAAAGGGA +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSWPRRL*DAGAKG
Trigger: TCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGCAGGGGAGAAGAGCTaGTGGCCGCGGCGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEAGEKS*WPRRLC
Trigger: GCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGCCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKREMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp GTCCTTGCGACAGTAGGCCTTGCCGTCCTTCTCGTGGAACCCTTCGGGACCAAAAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: VLATVGLAVLLVEPFGTKNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...TTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGAAGCCAGGACAGAGATaGTTCTTCTCAGGGGAATGG +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVKPGQR*FFSGEW
Trigger: CCATTCCCCTGAGAAGAACCATCTCTGTCCTGGCTT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 2 (lower is better)
Translates to: VRLVVLLLEGALVELLEADPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVSPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCACGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 2 (lower is better)
Translates to: VRLVVLLLEGALVELLEARSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp AGCCAACACTGTCCTGAGGGTTGGAGACACTGGAAGTTTTGGCACTGGAGCCGTACAGGTGATGAGGACTaGGGCTGCTGGTGGATGAAT +
Preference number: 2 (lower is better)
Translates to: SQHCPEGWRHWKFWHWSRTGDED*GCWWMN
Trigger: ATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGT...ACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAGCCCGGGGCAGTACTaGGGACCAGTCGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKSPGQY*GPVEEG
Trigger: TCCTTCCTCGACTGGTCCTCAGTACTGCCCCGGGCT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 2 (lower is better)
Translates to: HSASARRPVEWFGLSPLDLGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGTCCCCATCCGCTCTTTaGTCCAGGCCCTGGATCTGC +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLSPSAL*SRPWIC
Trigger: GCAGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGA...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
3UTR-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGCCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGGGTCCTCATCAGTCTaGCAGCCCACGGACCTCATG +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDGSSSV*QPTDLM
Trigger: CATGAGGTCCGTGGGCTGCCAGACTGATGAGGACCC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAG +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSPVMGF*QPEHSE
Trigger: CTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGCTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQLGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTGGGCCTTCCCACTCTaGACCAAGAGTGGGGCCAGT +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFWAFPL*TKSGAS
Trigger: ACTGGCCCCACTCTTGGTGCAGAGTGGGAAGGCCCA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGGCGGCGTCTGTGCGATaGTGGAGCAAAGGGACAGAA +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLAASVR*WSKGTE
Trigger: TTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGC...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: RLVVLLLEGALVELLEAETKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCATTCTTCTCAGGGGAATaGGAGAGCCAGGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: VRLVVLLLEGALVELLEAFFSGE*ESQEGR
Trigger: TCTTCCCTCCTGGCTCTCCCATTCCCCTGAGAAGAA...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGAGCCCACGGACCTCATaGTGTGGGGTGCAGGAATGG +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPSPRTS*CGVQEW
Trigger: CCATTCCTGCACCCCACACCATGAGGTCCGTGGGCT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 2 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTTCTGGTCTCCCTTCTaGAGTGGCTTCTTTCCTCGA +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQFWSPF*SGFFPR
Trigger: TCGAGGAAAGAAGCCACTCCAGAAGGGAGACCAGAA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR CAA 90 bp GCCCCTTTGGTTCTCTGCCTTTGGATGGATGGATTTATGCTGGCATaGTCTGGAGGGAGCCGGGTGTCCCCCAATAATCACAGAACAAAG +
Preference number: 2 (lower is better)
Translates to: APLVLCLWMDGFMLA*SGGSRVSPNNHRTK
Trigger: CTTTGTTCTGTGATTATTGGGGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAACCAAAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: KKCSGCHVRSRAVTTLSRGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 2 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATGTCGAAGTAGTCCTTaGGACAGTAGGCCTTGCCGT +
Preference number: 2 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWECRSSP*DSRPCR
Trigger: ACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGTTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGTTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACAGGAGCCCAAGGCCTaGCTCCTCTTTCATCCTTGG +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKQEPKA*LLFHPW
Trigger: CCAAGGATGAAAGAGGAGCCAGGCCTTGGGCTCCTG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGGCGTCTGTGCGATGCTaGAGCAAAGGGACAGAAGGA +
Preference number: 2 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLASVRC*SKGTEG
Trigger: TCCTTCTGTCCCTTTGCTCCAGCATCGCACAGACGC...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACTGGGCCATGAACTGTaGACACGGAGGGGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRLGHEL*TRRGLV
Trigger: GACCAGCCCCCTCCGTGTCCACAGTTCATGGCCCAG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR TCA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGTGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVRRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: KKEGPSSETPAHSASARRINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTGTCGAAGTAGTCCTTaGGACAGTAGGCCTTGCCGT +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSCRSSP*DSRPCR
Trigger: ACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWENMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACAGGAAGGAGCAGACATaGGTGGACCCACAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRKEQT*VDPQKS
Trigger: GCTTTTCTGTGGGTCCACCCATGTCTGCTCCTTCCT...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR CAA 90 bp GGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAGAAGGGGTTTCCAAATACAGCAGTT +
Preference number: 2 (lower is better)
Translates to: GPKGCNTLQPVSVKS*LAWEVKKGFPNTAV
Trigger: AACTGCTGTATTTGGAAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWECTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCACGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 2 (lower is better)
Translates to: VRLVVLLLEGALVELLEARRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKSPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCATCTTTCCAGACCCCCTaGGTGCCGATCCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSSFQTP*VPIPPV
Trigger: CACAGGTGGGATCGGCACTCAGGGGGTCTGGAAAGA...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRQRVEG*DIVLQD
Trigger: ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATCCCTCCTGGACAGATaGGCTGATGGAGACAAGAAG +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKSLLDR*ADGDKK
Trigger: CTTCTTGTCTCCATCAGCTCATCTGTCCAGGAGGGA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR GCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: FPDPLSADPTCERGGADLTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSLGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGCGGCGTCTGTGCGATaGTGGAGCAAAGGGACAGAA +
Preference number: 2 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRAASVR*WSKGTE
Trigger: TTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 2 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSELFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGATTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 2 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRDPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKERLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGATGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 2 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWERRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKLGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSLLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 2 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRRRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 2 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 2 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFRRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKRRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTCTTTCCAGACCCCCTaGGTGCCGATCCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKESFQTP*VPIPPV
Trigger: CACAGGTGGGATCGGCACTCAGGGGGTCTGGAAAGA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAACGGACCTCATGGTGTaGGGTGCAGGAATGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPTDLMV*GAGMGR
Trigger: CCTTCCCATTCCTGCACCCCACACCATGAGGTCCGT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKECRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKENPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKESPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGATTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKENMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCATTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKERRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 2 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGCGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKERRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR GCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKESQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 72 bp GCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAGCCGCGCCGCTCGTGG +
Preference number: 3 (lower is better)
Translates to: AMAVMQRPVMGF*QPEHSEPRRSW
Trigger: CCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CCA 72 bp GTGGAGGTGACGCGCTGCGGGCTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGGACGGGGCTGGGCACG +
Preference number: 3 (lower is better)
Translates to: VEVTRCGLLISP*FTVMAGTGLGT
Trigger: CGTGCCCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR GCA 72 bp AGCTCCCTGGTGGCAGAGGAGGCCGAGATGCGTGTCTaGTGTTGGGTGGAGGTGACGCGCTGCGGGCTGCTC +
Preference number: 3 (lower is better)
Translates to: SSLVAEEAEMRV*CWVEVTRCGLL
Trigger: GAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAGGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CAA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACACCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 3 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR GCA 72 bp GCGACTGTGGCGACCCCCAGCTTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTGTCCAGCTGGCTCCCG +
Preference number: 3 (lower is better)
Translates to: ATVATPSLFRSD*RLPSMLSSWLP
Trigger: CGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR GCA 72 bp CCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGA +
Preference number: 3 (lower is better)
Translates to: PWRSQPARRWAS*RPRRLLWRLWR
Trigger: TCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CCA 72 bp CGGAGCTCTCCAGTTCATCCAAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGCCCCGGCCCCCATTCC +
Preference number: 3 (lower is better)
Translates to: RSSPVHPRDSPH*AARPPGPGPHS
Trigger: GGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 72 bp CTGGTGGCAGAGGAGGCCGAGATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGCGGGCTGCTCATCTCG +
Preference number: 3 (lower is better)
Translates to: LVAEEAEMRVCC*VEVTRCGLLIS
Trigger: CGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CAA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 3 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CAA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 3 (lower is better)
Translates to: KKEGPSSETPAHSASARRAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CAA 90 bp CAGTTCATCCAAGAGACTCTCCACACTGGGCCGCACGTCCTCCAGGCCCCGGCCGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 3 (lower is better)
Translates to: QFIQETLHTGPHVLQAPAVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...GGCCGGGGCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR TCA 72 bp AGGAGGCCGAGATGCGTGTCTGCTGTTGGGTGGAGGTaGCGCGCTGCGGGCTGCTCATCTCGCCCTGGTTCA +
Preference number: 3 (lower is better)
Translates to: RRPRCVSAVGWR*RAAGCSSRPGS
Trigger: TGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 72 bp CGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCAGCTTGTTCAGGTCAG +
Preference number: 3 (lower is better)
Translates to: RRWASCRPRRLL*RLWRPPACSGQ
Trigger: CTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CCA 72 bp CCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTAGACCCCGGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: PAHSASARRPVE*FGLSPLDPGGA
Trigger: GGCCCCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 72 bp GCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCAGGTCAGACTGCAGGC +
Preference number: 3 (lower is better)
Translates to: ASCRPRRLLWRL*RPPACSGQTAG
Trigger: GCCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CCA 72 bp TCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAGTGCTCGGGGTGCCAC +
Preference number: 3 (lower is better)
Translates to: SRSKKFRDPISS*QWVQTKCSGCH
Trigger: GTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CAA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 3 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVRSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CAA 90 bp TGGGGCCGTTGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 3 (lower is better)
Translates to: WGRCSSSSAGRRGCGSPFPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...AAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR TCA 72 bp GTGGCTTCTTTCCTCGATGGGAGCCCGGGGCAGTACTaGGGACCAGTCGAGGAAGGAGCAGACATGGGTGGA +
Preference number: 3 (lower is better)
Translates to: VASFLDGSPGQY*GPVEEGADMGG
Trigger: TCCACCCATGTCTGCTCCTTCCTCGACTGGTCCTCAGTACTGCCCCGGGCTCCCATCGAGGAAAGAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR GCA 72 bp GAGTTGGCCTCATCTGCAGGGAAGCCTGGCGGGTTATaGTGTACAGCGTTCAGTTCCAGCAGCAGGCGGTCG +
Preference number: 3 (lower is better)
Translates to: ELASSAGKPGGL*CTAFSSSSRRS
Trigger: CGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGAGGCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CAA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR TCA 72 bp CACAAAGCACTCAGGATGCCACAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGATGGCCCGGGCGCAGCC +
Preference number: 3 (lower is better)
Translates to: HKALRMPQRVEG*DIVLQDGPGAA
Trigger: GGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR GCA 72 bp GTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTACGGTGGGTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: VPAAGGRVQKGC*PGTCSLRWVKA
Trigger: AGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 72 bp AGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATCAGGAGCCCAAGGCCT +
Preference number: 3 (lower is better)
Translates to: SGVVWTVTIRPR*GPFLLIRSPRP
Trigger: AGGCCTTGGGCTCCTGATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 72 bp TTCTGGTCTCCCTTCTGGAGTGGCTTCTTTCCTCGATaGGAGCCCGGGGCAGTACTGAGGACCAGTCGAGGA +
Preference number: 3 (lower is better)
Translates to: FWSPFWSGFFPR*EPGAVLRTSRG
Trigger: TCCTCGACTGGTCCTCAGTACTGCCCCGGGCTCCCATCGAGGAAAGAAGCCACTCCAGAAGGGAGACCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR-3UTR CAA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 3 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CAA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 72 bp CTCGGGAGCACGGAGAGCCAACACTGTCCTGAGGGTTaGAGACACTGGAAGTTTTGGCACTGGAGCCGTACA +
Preference number: 3 (lower is better)
Translates to: LGSTESQHCPEG*RHWKFWHWSRT
Trigger: TGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CAA 90 bp GTTCAGTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACGTGAGACACTGGAAGTTTaGGCACTGGAGCCGTACACA +
Preference number: 3 (lower is better)
Translates to: VQFQQQAVEFRKVAAQGRETLEV*ALEPYT
Trigger: TGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTC...ACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR GCA 72 bp TTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAGACGAAGTGCTCGGGG +
Preference number: 3 (lower is better)
Translates to: LSFCSLKVPLLS*LRQKAQTKCSG
Trigger: CCCCGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR GCA 72 bp GGCGGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAGGCTCAGCTGATTTCT +
Preference number: 3 (lower is better)
Translates to: GGRVQKGCCPGT*SLRWVKAQLIS
Trigger: AGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 72 bp CCAGAAACCCCAGTCCCTCTTGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCGGTAAGGCCTGCGGGT +
Preference number: 3 (lower is better)
Translates to: PETPVPLGEDLG*VTINRAVRPAG
Trigger: ACCCGCAGGCCTTACCGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 3 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWERSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp TTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGGCACAGACGAAGTGCTCGCCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: LKVPLLSCLRQKAQTKCSPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...CGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CAA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR CCA 72 bp TGTCCTGAGGGTTGGAGACACTGGAAGTTTTGGCACTaGAGCCGTACACAGGTGATGAGGACTGAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: CPEGWRHWKFWH*SRTQVMRTEAA
Trigger: AGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 72 bp ACGGAGAGCCAACACTGTCCTGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGCCGTACACAGGTGATG +
Preference number: 3 (lower is better)
Translates to: TESQHCPEGWRH*KFWHWSRTQVM
Trigger: CATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR CCA 72 bp CAGAAAGGTTGCTGCCCAGGGACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATTTCTGCTTGTTGGGGA +
Preference number: 3 (lower is better)
Translates to: QKGCCPGTCSLR*VKAQLISACWG
Trigger: TCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
3UTR-3UTR CAA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 3 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR TCA 72 bp CAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCTGGAGAGGCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: QCPGTPSRRRRK*LENIIAGEAFL
Trigger: GAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 3 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFRSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 3 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR TCA 72 bp ACAGGGATGGGGGTACTTTTCTCCCTCCTGGACAGATaGGCTGATGGAGACAAGAAGTACAACCTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: TGMGVLFSLLDR*ADGDKKYNLLQ
Trigger: CTGGAGGAGGTTGTACTTCTTGTCTCCATCAGCTCATCTGTCCAGGAGGGAGAAAAGTACCCCCATCCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR CCA 72 bp ACTCAGAGAATGGACCCCAGAAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGTCACTATAAACAGAGC +
Preference number: 3 (lower is better)
Translates to: TQRMDPRNPSPS*GRSRVGHYKQS
Trigger: GCTCTGTTTATAGTGACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTTTCTGGGGTCCATTCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 3 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSERSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGCCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTCCTTGAAGGTGCCCTaGTTGAGCTGCTTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFSLKVP*LSCLRQ
Trigger: CTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CAA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTTGAAGGTGCCCTTGTaGAGCTGCTTGAGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPLKVPL*SCLRQK
Trigger: CTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
3UTR TCA 72 bp GAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACCAGCTTTCCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: EEINKTKETSES*WPKSDTSFPEK
Trigger: CTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCATCGGTCAGCCAGTCCTaGGCAGAGGGCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPSVSQS*AEGPAA
Trigger: GGCGGCGGGGCCCTCTGCCCAGGACTGGCTGACCGA...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CTGGGCAGGGGAGAAGAGCTGCTGGCCGCGGCGTCTGTGCGATGCTGGAGCAAAGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LGRGEELLAAASVRCWSKAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...TTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTAACCCGGACCCCAGGTaGTTGGCTCTGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFNPDPR*LALAQP
Trigger: GGGCTGGGCCAGAGCCAAGCACCTGGGGTCCGGGTT...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCAGGGGAGAAGAGCTaGTGGCCGCGGCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPAGEKS*WPRRLC
Trigger: GCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGC...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CAA 72 bp CCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: PMAVTTCPAMGF*QAPQTPLATVA
Trigger: CGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp CGGCCCCCATTCCGCTTAGGCTTCTCTTTCGTCAGGGGCCCAGCTTTGCCTCCCGCTGTTGGGTGGAGGTaGCGCGCTGCGGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RPPFRLGFSFVRGPALPPAVGWR*RAAGCS
Trigger: TGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGC...GGGAGGCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp CAAGAGACTCTCCACACTGGGCCGCACGTCCTCCAGGCCCCGGCCCCCATTCCGCAGAGGAGGCCGAGATaGGTGTCTGCTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QETLHTGPHVLQAPAPIPQRRPR*VSAVGW
Trigger: CCACCCAACAGCAGACACGCATCTCGGCCTCCTCTG...CGGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTAACCCTCCCTCGTCCTaGCCTCCGGGGCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGNPPSS*PPGLLR
Trigger: GCGGAGCAGCCCCGGAGGGCAGGACGAGGGAGGGTT...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228307.11
ENST00000323871.9
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp CTGGGCAGGGGAGAAGAGCTGCTGGCCGCGGCGTCTGTGCGATGCTGGAGCAAACCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGRGEELLAAASVRCWSKPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...TTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCATGGCAGCTTCCGTGGTaGCCTCTGGGCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPWQLPW*PLGSLG
Trigger: CCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCA...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAACCTTCTCTACGAGCTaGCCCCCGGCCCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPTFSTS*PPARFP
Trigger: TGGGAAGCGGGCCGGGGGGCAGCTCGTAGAGAAGGT...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCGTCGAGGTCGTCCATaGCCGGACCACGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRRRGRP*PDHGRR
Trigger: CCGGCGCCCGTGGTCCGGCCATGGACGACCTCGACG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000637617.2
CDS-3UTR CCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTCGTCCAGCTCCCTGGTaGCAGAGGAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFRPAPW*QRRPRC
Trigger: GCATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACG...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp CCTGTCTTCCCCTGGGCCATGAACTGTGGACACGGAGGGGGCTGGTCAGGACTCCAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PVFPWAMNCGHGGGWSGLQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...GAGTCCTGACCAGCCCCCTCCGTGTCCACAGTTCATGGCCCAGGGGAAGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGCACGAAGGGCTGGCTaGTGGCCCCTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWARRAG*WPLGLP
Trigger: GGGGAGCCCCAGGGGCCACCAGCCAGCCCTTCGTGC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTAGGGCTCCCGGGACATaGGGTGTGCGTGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFRAPGT*GVRGQT
Trigger: AGTCTGGCCACGCACACCCCATGTCCCGGGAGCCCT...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACGGACCCCAGGTGCTTaGCTCTGGCCCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSRTPGA*LWPSPS
Trigger: GCTGGGGCTGGGCCAGAGCCAAGCACCTGGGGTCCG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CAA 72 bp CCTGGTGGCAGAGGAGGCCGAGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTGCGGGCTGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: PGGRGGRDACLL*GGGDALRAAHL
Trigger: GAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCGCCCTGGTTCACAGTaGTGGCAGGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGRPGSQ*WQGRGW
Trigger: CCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCGCCCTGGTTCACAGTaGTGGCAGGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSRPGSQ*WQGRGW
Trigger: CCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGCTGTTGGGTGGAGGTaGCGCGCTGCGGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGAVGWR*RAAGCS
Trigger: TGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACAAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp TGGGTGGAGGTGACGCGCTGCGGGCTGCTCATCTCGCCCTGGTTCACAGTGATGGGGGCCGCTCGTCTATaGCCCGCAACTTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: WVEVTRCGLLISPWFTVMGAARL*PATFPP
Trigger: CGGCGGAAAAGTTGCGGGGCATAGACGAGCGGCCCC...CATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGTGGAGGTGACGCGCTaGGGGCTGCTCATCTCGCCC +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGVEVTR*GLLISP
Trigger: GGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCAC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGAACCCTCCCTCGTCCTaGCCTCCGGGGCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWNPPSS*PPGLLR
Trigger: GCGGAGCAGCCCCGGAGGGCAGGACGAGGGAGGGTT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228307.11
ENST00000323871.9
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACATGGCAGCTTCCGTGGTaGCCTCTGGGCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTWQLPW*PLGSLG
Trigger: CCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCA...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGCAGGGGAGAAGAGCTaGTGGCCGCGGCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSAGEKS*WPRRLC
Trigger: GCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCGTCGAGGTCGTCCATaGCCGGACCACGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVRRGRP*PDHGRR
Trigger: CCGGCGCCCGTGGTCCGGCCATGGACGACCTCGACG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000637617.2
CDS-3UTR CCA 90 bp GAGGTGACGCGCTGCGGGCTGCTCATCTCGCCCTGGTTCACAGTGATGGCAGGGAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EVTRCGLLISPWFTVMAGRDSPH*AARPPG
Trigger: GCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCT...CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCAGCATGCTGTCCAGCTaGCTCCCGGGCTTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTSMLSS*LPGFGG
Trigger: GCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCT...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGGGAACTCCGGAGTGTaGCCCTGGCCTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGGNSGV*PWPRGE
Trigger: CTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGGGTCCTGCTCAAGGTaGCAGGGTCCAGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRGSCSR*QGPAGG
Trigger: GCCGCCGGCTGGACCCTGCCACCTTGAGCAGGACCC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
3UTR CAA 72 bp CCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCCAGCTTGTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PAMGFLQAPQTP*ATVATPSLFRS
Trigger: TGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGCTGTTGGGTGGAGGTaGCGCGCTGCGGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWAVGWR*RAAGCS
Trigger: TGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCATCTGCAGGGAAGCCTGGCGGGTTATGCTGTACAGCGTTCAGTTCCAGCAGCCACTGCGTTCCCTCCTaGCAGGGCCGCGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: SSAGKPGGLCCTAFSSSSHCVPS*QGRAAA
Trigger: CGCGGCTGCGCGGCCCTGTCAGGAGGGAACGCAGTG...GCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGGGGCCGCTCGTCTATaGCCCGCAACTTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGGAARL*PATFPP
Trigger: CGGCGGAAAAGTTGCGGGGCATAGACGAGCGGCCCC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000637617.2
CDS-3UTR GCA 90 bp AGGGACGGGGCTGGGCACGGAGCTCTCCAGTTCATCCAAGAGACTCTCCACACTGTGGAGGTGACGCGCTaGGGGCTGCTCATCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RDGAGHGALQFIQETLHTVEVTR*GLLISP
Trigger: GGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCAC...AGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGAACCCTCCCTCGTCCTaGCCTCCGGGGCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVNPPSS*PPGLLR
Trigger: GCGGAGCAGCCCCGGAGGGCAGGACGAGGGAGGGTT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228307.11
ENST00000323871.9
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATGGCAGCTTCCGTGGTaGCCTCTGGGCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSWQLPW*PLGSLG
Trigger: CCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTATGCCCAGCCGCCCCTaGAGCTCCGCGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGMPSRP*SSAMSC
Trigger: ACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCAT...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGATGCCCAGCCGCCCCTaGAGCTCCGCGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVMPSRP*SSAMSC
Trigger: ACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCAT...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGGAAGGGCAGGGCCCTaGACCCCCTCATCATGGGGC +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRGRAGP*TPSSWG
Trigger: GCCCCATGATGAGGGGGTGCAGGGCCCTGCCCTTCC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACGTCCAGCTCCCTGGTaGCAGAGGAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSRPAPW*QRRPRC
Trigger: GCATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTGGGCAGGGGAGAAGAGCTGCTGGCCGCGGCGTCTGTGCGATGCTGGAGCAAACCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: LGRGEELLAAASVRCWSKPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...TTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGCACAGGGTACAGTGTaGCAGCGGGGAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSAQGTV*QRGAPE
Trigger: CTCTGGGGCTCCCCGCTGCCACACTGTACCCTGTGC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp GTCCTTGCGACAGTAGGCCTTGCCGTCCTTCTCGTGGAACCCTTCGGGACCAAACTGGGCACGAAGGGCTaGCTGGTGGCCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VLATVGLAVLLVEPFGTKLGTKG*LVAPGA
Trigger: AGCCCCAGGGGCCACCAGCCAGCCCTTCGTGCCCAG...TTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGAGCCAAGGCCTCCTCTaGGCACGAAGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSSQGLL*ARRAGW
Trigger: CCAGCCAGCCCTTCGTGCCCAGAGGAGGCCTTGGCT...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGTACCTCCGAAGCCCATaGCTGCTCCCATGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLYLRSP*LLPCGS
Trigger: GCTGCCACATGGGAGCAGCCATGGGCTTCGGAGGTA...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCCCTGGGTTGGCCTaGCCACACTTCCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSVPGLA*PHFPSR
Trigger: CCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGAC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGAGCTGTTCCTGGGATaGGGTCCTGCTCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFELFLG*GPAQGG
Trigger: GCCACCTTGAGCAGGACCCCATCCCAGGAACAGCTC...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGCGGACCCCAGGTGCTTaGCTCTGGCCCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQRTPGA*LWPSPS
Trigger: GCTGGGGCTGGGCCAGAGCCAAGCACCTGGGGTCCG...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAAGGAGGCGAGCAGGCTaGGCAGGGGAGAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPRRRAG*AGEKSC
Trigger: GCAGCTCTTCTCCCCTGCCCAGCCTGCTCGCCTCCT...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CTGGGCAGGGGAGAAGAGCTGCTGGCCGCGGCGTCTGTGCGATGCTGGAGCAAATGCACCCCCTCATCATaGGGCTCTTCCCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LGRGEELLAAASVRCWSKCTPSS*GSSPAL
Trigger: GAGTGCAGGGGAAGAGCCCCATGATGAGGGGGTGCA...TTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
3UTR CAA 72 bp CCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: PQTPLATVATPS*FRSDCRLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCAAGGATTGTGCCATTaGGGGCCTCGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTQGLCH*GPRWTG
Trigger: CCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp GGGAAGCCTGGCGGGTTATGCTGTACAGCGTTCAGTTCCAGCAGCAGGCGGTCGCAAGGATTGTGCCATTaGGGGCCTCGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: GKPGGLCCTAFSSSSRRSQGLCH*GPRWTG
Trigger: CCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTG...CGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTEAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCGCCCTGGTTCACAGTaGTGGCAGGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWRPGSQ*WQGRGW
Trigger: CCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACC +
Preference number: 4 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPGKACG*KWRHQT
Trigger: GGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACC...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACACAGAGAGCTCACTTGTaGTGGTCGGCAGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTQRAHL*WSAGAS
Trigger: GGAGGCACCTGCCGACCATCACAAGTGAGCTCTCTG...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACTGCTCCGTGGTAACTaGGGCAGGGGAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSLLRGN*GRGAAS
Trigger: GGAAGCAGCTCCCCTGCCTCAGTTACCACGGAGCAG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR TCA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGACTCCCAGCTCCTCCTaGTCACAGATCGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLTPSSS*SQIGSG
Trigger: GCCAGATCCGATCTGTGATCAGGAGGAGCTGGGAGT...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAAGCCCGGGGCAGTACTaGGGACCAGTCGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSSPGQY*GPVEEG
Trigger: TCCTTCCTCGACTGGTCCTCAGTACTGCCCCGGGCT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCGGGAGCTGCTGGGCTaGCACTGGTCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGRELLG*HWSKGS
Trigger: TGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCGGGAGCTGCTGGGCTaGCACTGGTCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSRELLG*HWSKGS
Trigger: TGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGTGGAGGTGACGCGCTaGGGGCTGCTCATCTCGCCC +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLVEVTR*GLLISP
Trigger: GGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCAC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGTGGAGGTGACGCGCTaGGGGCTGCTCATCTCGCCC +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWVEVTR*GLLISP
Trigger: GGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCAC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGTGGAGGTGACGCGCTaGGGGCTGCTCATCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVVEVTR*GLLISP
Trigger: GGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCAC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGGCCTGCCGGTCCACTaGCACTACAGCTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTGLPVH*HYSWLC
Trigger: ACAGAGCCAGCTGTAGTGGCAGTGGACCGGCAGGCC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGACCTTCTCTACGAGCTaGCCCCCGGCCCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRTFSTS*PPARFP
Trigger: TGGGAAGCGGGCCGGGGGGCAGCTCGTAGAGAAGGT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSRDSPH*AARPPG
Trigger: GCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTGGCAGGGACGGGGCTaGGCACGGAGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWWQGRG*ARSSPV
Trigger: AACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCTCCCTGTCTTCCCCTaGGCCATGAACCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGLPVFP*AMNPPS
Trigger: CGAGGGAGGGTTCATGGCCCAGGGGAAGACAGGGAG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228307.11
ENST00000323871.9
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLDPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFDPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTCTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGAGCACGAAGGGCTGGCTaGTGGCCCCTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RSVQGATSGQGLSPLYPGARRAG*WPLGLP
Trigger: GGGGAGCCCCAGGGGCCACCAGCCAGCCCTTCGTGC...TCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCCTTCCCGTCCTGGGTaGCAGCTTCCGTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRPSRPG*QLPWCP
Trigger: AGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTCCTCTCCGTGGTGCTaGGTGTGCCCATGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGSSPWC*VCPWPW
Trigger: CCATGGCCATGGGCACACCCAGCACCACGGAGAGGA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTTGGATCTGGCCAGAGGTaGAAATCCTCTCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLLAGPADSFGDCGDPQLGSGQR*KSSPWC
Trigger: GCACCACGGAGAGGATTTCCACCTCTGGCCAGATCC...AAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGGGTCCTGCTCAAGGTaGCAGGGTCCAGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYGSCSR*QGPAGG
Trigger: GCCGCCGGCTGGACCCTGCCACCTTGAGCAGGACCC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTGGGCAGGGGAGAAGAGCTGCTGGCCGCGGCGTCTGTGCGATGCTGGAGCAAAACGGACCTCATGGTGTaGGGTGCAGGAATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGRGEELLAAASVRCWSKTDLMV*GAGMGR
Trigger: CCTTCCCATTCCTGCACCCCACACCATGAGGTCCGT...TTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCAAGGATTGTGCCATTaGGGGCCTCGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWQGLCH*GPRWTG
Trigger: CCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARREAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCGCCCTGGTTCACAGTaGTGGCAGGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYRPGSQ*WQGRGW
Trigger: CCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGCTGGTCAGGACTCCTaGGGCTCGGGGTACGGTGTC +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLAGQDS*GSGYGV
Trigger: GACACCGTACCCCGAGCCTCAGGAGTCCTGACCAGC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCTCCAATCTCGACCCTaGCTCTCTGTGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTLQSRP*LSVPTA
Trigger: GGCAGTGGGCACAGAGAGTCAGGGTCGAGATTGGAG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR TCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCCCTGCAGCTCCGCGATaGGCTGTTCCTGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCPAAPR*AVPGMG
Trigger: CCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGG...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGAGGTCGAGCCAGACCTaGGTTCAAGTGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSRSSQT*VQVPAP
Trigger: GGGAGCTGGCACTTGAACTCAGGTCTGGCTCGACCT...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR GCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCGGGGCCGCTCGTCTATaGCCCGCAACTTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCGAARL*PATFPP
Trigger: CGGCGGAAAAGTTGCGGGGCATAGACGAGCGGCCCC...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCGGGAGCTGCTGGGCTaGCACTGGTCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWRELLG*HWSKGS
Trigger: TGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGTGGAGGTGACGCGCTaGGGGCTGCTCATCTCGCCC +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPVEVTR*GLLISP
Trigger: GGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCAC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGCCGAGATGCGTGTCTaGTGTTGGGTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSAEMRV*CWVEVT
Trigger: CGTCACCTCCACCCAACAGCAGACACGCATCTCGGC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCAGAGGAGGCCGAGATaGGTGTCTGCTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSQRRPR*VSAVGW
Trigger: CCACCCAACAGCAGACACGCATCTCGGCCTCCTCTG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGAACCCTCCCTCGTCCTaGCCTCCGGGGCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQNPPSS*PPGLLR
Trigger: GCGGAGCAGCCCCGGAGGGCAGGACGAGGGAGGGTT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228307.11
ENST00000323871.9
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGTTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPVPLLS*LRQKAQ
Trigger: CTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGCCTTGGCCTCTCCTaGTGTAGGCCATGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVGLGLS*CRPCSS
Trigger: GGAGGAACATGGCCTACAGCAGGAGAGGCCAAGGCC...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR GCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCGCTTCCCACGTGGCTaGACAGTGATGATGACGCCC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSRFPRG*TVMMTP
Trigger: GGGCGTCATCATCACTGTGCAGCCACGTGGGAAGCG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCGCTTCCCACGTGGCTaGACAGTGATGATGACGCCC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTRFPRG*TVMMTP
Trigger: GGGCGTCATCATCACTGTGCAGCCACGTGGGAAGCG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TGGGGCCGTTGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTAACCCGGACCCCAGGTaGTTGGCTCTGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: WGRCSSSSAGRRGCGSPFNPDPR*LALAQP
Trigger: GGGCTGGGCCAGAGCCAAGCACCTGGGGTCCGGGTT...AAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGCAGGGGAGAAGAGCTaGTGGCCGCGGCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDAGEKS*WPRRLC
Trigger: GCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGGAAGGGCAGGGCCCTaGACCCCCTCATCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYGRAGP*TPSSWG
Trigger: GCCCCATGATGAGGGGGTGCAGGGCCCTGCCCTTCC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGGAAGGGCAGGGCCCTaGACCCCCTCATCATGGGGC +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDGRAGP*TPSSWG
Trigger: GCCCCATGATGAGGGGGTGCAGGGCCCTGCCCTTCC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGGCCCCCATTCCGCTTAGGCTTCTCTTTCGTCAGGGGCCCAGCTTTGCCTCCCCTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPPFRLGFSFVRGPALPPLLISP*FTVMAG
Trigger: CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAG...GGGAGGCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp GTTCAGTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACGTCGTCCAGCTCCCTGGTaGCAGAGGAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: VQFQQQAVEFRKVAAQGRRPAPW*QRRPRC
Trigger: GCATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACG...ACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAGCATGCTGTCCAGCTaGCTCCCGGGCTTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPSMLSS*LPGFGG
Trigger: GCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTTAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GLLAGPADSFGDCGDPQLNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...AAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCTGGGCCATGAACTGTaGACACGGAGGGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWLGHEL*TRRGLV
Trigger: GACCAGCCCCCTCCGTGTCCACAGTTCATGGCCCAG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGTCCCTGGGTTGGCCTaGCCACACTTCCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLVPGLA*PHFPSR
Trigger: CCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGAC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTCAGGTCCCTGGGTTaGCCTGGCCACACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGFRSLG*PGHTSP
Trigger: AGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGAGGGCTCCCGGGACATaGGGTGTGCGTGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWRAPGT*GVRGQT
Trigger: AGTCTGGCCACGCACACCCCATGTCCCGGGAGCCCT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGAGCTGTTCCTGGGATaGGGTCCTGCTCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSELFLG*GPAQGG
Trigger: GCCACCTTGAGCAGGACCCCATCCCAGGAACAGCTC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCCAGGTGCTTGGCTCTaGCCCAGCCCCAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPPGAWL*PSPSHG
Trigger: CCCATGGCTGGGGCTGGGCCAGAGCCAAGCACCTGG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCTCAGCCCACAGGGGTaGCGGGACCTCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVLSPQG*RDLPRL
Trigger: GAGCCTGGGGAGGTCCCGCCACCCCTGTGGGCTGAG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGAGCCCACGGACCTCATaGTGTGGGGTGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSSPRTS*CGVQEW
Trigger: CCATTCCTGCACCCCACACCATGAGGTCCGTGGGCT...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGCTTTGCCTCCCAAGGGGCTGTTAGTCTCTGGGACACCATAGAGGGGGCTCAGCCAGCAGGGCGTCTCTaGGAGTCAGGCACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SFASQGAVSLWDTIEGAQPAGRL*ESGTWH
Trigger: GTGCCAGGTGCCTGACTCCCAGAGACGCCCTGCTGG...CTGAGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAGGCAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp AGCACGGAGAGCCAACACTGTCCTGAGGGTTGGAGACACTGGAAGTTTTGGCACCGCCCTGGTTCACAGTaGTGGCAGGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: STESQHCPEGWRHWKFWHRPGSQ*WQGRGW
Trigger: CCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCG...GTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGCTGTTGGGTGGAGGTaGCGCGCTGCGGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQAVGWR*RAAGCS
Trigger: TGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CTGGGCAGGGGAGAAGAGCTGCTGGCCGCGGCGTCTGTGCGATGCTGGAGCAAAAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LGRGEELLAAASVRCWSKSPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...TTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp GGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTTTTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLLAGPADSFGDCGDPQLFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...AAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSGKACG*KWRHQT
Trigger: GGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCTCCAATCTCGACCCTaGCTCTCTGTGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRLQSRP*LSVPTA
Trigger: GGCAGTGGGCACAGAGAGTCAGGGTCGAGATTGGAG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGGCCATGTTCCTCCGTaGGAGTCCAGGTATCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTGHVPP*ESRYLG
Trigger: TCCCAGATACCTGGACTCTCACGGAGGAACATGGCC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR TCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCACTCCCAGCTCCTCCTaGTCACAGATCGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTTPSSS*SQIGSG
Trigger: GCCAGATCCGATCTGTGATCAGGAGGAGCTGGGAGT...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCCTGCAGCTCCGCGATaGGCTGTTCCTGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYPAAPR*AVPGMG
Trigger: CCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGGGGCCGCTCGTCTATaGCCCGCAACTTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYGAARL*PATFPP
Trigger: CGGCGGAAAAGTTGCGGGGCATAGACGAGCGGCCCC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000637617.2
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCGGGAGCTGCTGGGCTaGCACTGGTCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVRELLG*HWSKGS
Trigger: TGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGCCPGT*SLRWVK
Trigger: CTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCATGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPCCPGT*SLRWVK
Trigger: CTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCA...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR GCA 90 bp GGGCCCAGCTTTGCCTCCCAAGGGGCTGTTAGTCTCTGGGACACCATAGAGGGGTGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GPSFASQGAVSLWDTIEGCCPGT*SLRWVK
Trigger: CTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCA...CCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAGGCAAAGCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp CAGTTCATCCAAGAGACTCTCCACACTGGGCCGCACGTCCTCCAGGCCCCGGCCAAGCCTGGCGGGTTATaGTGTACAGCGTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QFIQETLHTGPHVLQAPAKPGGL*CTAFSS
Trigger: GGAACTGAACGCTGTACAGCATAACCCGCCAGGCTT...GGCCGGGGCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGCCGAGATGCGTGTCTaGTGTTGGGTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRAEMRV*CWVEVT
Trigger: CGTCACCTCCACCCAACAGCAGACACGCATCTCGGC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTCCCCATCCGCTCTTTaGTCCAGGCCCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGSPSAL*SRPWIL
Trigger: CAAGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWRRWAS*RPRRLL
Trigger: AAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTGCGACAGTAGGCCTTaGCGTCCTTCTCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSCDSRP*RPSRGT
Trigger: GGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGTGCGACAGTAGGCCTTaGCGTCCTTCTCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVCDSRP*RPSRGT
Trigger: GGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTTGTCGAAGTAGTCCTTaGGACAGTAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFCRSSP*DSRPCR
Trigger: ACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACA...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTCCGAAGCCCATGGCTaGTCCCATGTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWSEAHG*SHVAAK
Trigger: CTTGGCTGCCACATGGGAGCAGCCATGGGCTTCGGA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCGGCCTGCCGGTCCACTaGCACTACAGCTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCGLPVH*HYSWLC
Trigger: ACAGAGCCAGCTGTAGTGGCAGTGGACCGGCAGGCC...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTGGCAGGGACGGGGCTaGGCACGGAGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYWQGRG*ARSSPV
Trigger: AACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTGGCAGGGACGGGGCTaGGCACGGAGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPWQGRG*ARSSPV
Trigger: AACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSLLISP*FTVMAG
Trigger: CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGLLISP*FTVMAG
Trigger: CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWMRVCC*VEVTRC
Trigger: GCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSLLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAATCTCCTCCTGGCAGTaGGTGCAGACGAAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSISSWQ*VQTKCS
Trigger: CGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGAT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSDPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTRSRHT*VRTCRS
Trigger: ACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGRSRHT*VRTCRS
Trigger: ACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRPVMGF*QPEHSE
Trigger: CTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWPVMGF*QPEHSE
Trigger: CTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 4 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCCTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTCGGGGTACGGTGTCTaGCAGCACAGGGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLSGYGV*QHRDGG
Trigger: ACCCCCATCCCTGTGCTGCCAGACACCGTACCCCGA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGGGGAACTCCGGAGTGTaGCCCTGGCCTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KKCSGCHVRSRAVTTLSRGNSGV*PWPRGE
Trigger: CTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCC...CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGGCACATGGAAGCTCTaGCTGTTCCTTCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPGTWKL*LFLPVL
Trigger: CAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCC...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGGATCTGGCCAGAGGTaGAAATCCTCTCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSGSGQR*KSSPWC
Trigger: GCACCACGGAGAGGATTTCCACCTCTGGCCAGATCC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGGGGAGAAGAGCTGCTaGCCGCGGCGTCTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPGEKSC*PRRLCD
Trigger: ATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDEAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CGAGTTCAGAAAGGTTGCTGCCCAGGGACGTGCTCATTACGGTGGGTGAAGGCTGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVQKGCCPGTCSLRWVKAEAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...AGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSRSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTTCCTAGCAGAAGAGCTTaGGGAAGCAGTTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: GLLAGPADSFGDCGDPQLPSRRA*GSSSDS
Trigger: ACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGG...AAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAAGGGAGACCTTGAGTTaGAGGTGTCAGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSRETLS*RCQASP
Trigger: GGGTGATGCCTGACACCTTCAACTCAAGGTCTCCCT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCAGAGAGCTCACTTGTaGTGGTCGGCAGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLQRAHL*WSAGAS
Trigger: GGAGGCACCTGCCGACCATCACAAGTGAGCTCTCTG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGAAGGAGGGAGAGCGATaGGGAAGAAATCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSKEGER*GRNRQL
Trigger: GAGCTGGCGATTTCTTCCTCATCGCTCTCCCTCCTT...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CATCTGCAGGGAAGCCTGGCGGGTTATGCTGTACAGCGTTCAGTTCCAGCAGCACGGGAGCTGCTGGGCTaGCACTGGTCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HLQGSLAGYAVQRSVPAARELLG*HWSKGS
Trigger: TGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCG...TGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp AGCAGGCGGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACGTGCTCATTACGGTGGCCGAGATGCGTGTCTaGTGTTGGGTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: SRRSSSERLLPRDVLITVAEMRV*CWVEVT
Trigger: CGTCACCTCCACCCAACAGCAGACACGCATCTCGGC...CACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCAGAGGAGGCCGAGATaGGTGTCTGCTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVQRRPR*VSAVGW
Trigger: CCACCCAACAGCAGACACGCATCTCGGCCTCCTCTG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCAGAGGAGGCCGAGATaGGTGTCTGCTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWQRRPR*VSAVGW
Trigger: CCACCCAACAGCAGACACGCATCTCGGCCTCCTCTG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPRRWAS*RPRRLL
Trigger: AAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDRRWAS*RPRRLL
Trigger: AAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTGCGACAGTAGGCCTTaGCGTCCTTCTCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWCDSRP*RPSRGT
Trigger: GGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: RLVVLLLEGALVELLEAEDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTCCGAAGCCCATGGCTaGTCCCATGTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLSEAHG*SHVAAK
Trigger: CTTGGCTGCCACATGGGAGCAGCCATGGGCTTCGGA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGGCCTTGGCCTCTCCTaGTGTAGGCCATGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVGLGLS*CRPCSS
Trigger: GGAGGAACATGGCCTACAGCAGGAGAGGCCAAGGCC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCCGTGGTGCTGGGTGTaGCCATGGCCATGGCACATG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPPWCWV*PWPWHM
Trigger: CATGTGCCATGGCCATGGGCACACCCAGCACCACGG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCCGTGGTGCTGGGTGTaGCCATGGCCATGGCACATG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYPWCWV*PWPWHM
Trigger: CATGTGCCATGGCCATGGGCACACCCAGCACCACGG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGACCGGGACATGGGGTGTaGGTGGCCAGACTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGPGHGV*VARLPA
Trigger: AGCTGGGAGTCTGGCCACGCACACCCCATGTCCCGG...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGCGGCGTCTGTGCGATaGTGGAGCAAAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRAASVR*WSKGTE
Trigger: TTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACTGGCCGCGGCGTCTGTaGGATGCTGGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDWPRRL*DAGAKG
Trigger: TCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCA...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTGGCCGCGGCGTCTGTaGGATGCTGGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYWPRRL*DAGAKG
Trigger: TCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCTCCCCATCCGCTCTTTaGTCCAGGCCCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCSPSAL*SRPWIC
Trigger: GCAGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGA...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGCGTCGAGGTCGTCCATaGCCGGACCACGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLRRGRP*PDHGRR
Trigger: CCGGCGCCCGTGGTCCGGCCATGGACGACCTCGACG...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCGTCGAGGTCGTCCATaGCCGGACCACGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRRGRP*PDHGRR
Trigger: CCGGCGCCCGTGGTCCGGCCATGGACGACCTCGACG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000637617.2
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACTGCTGGGCTGCCACTaGTCTAAGGGGTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSLLGCH*SKGSRI
Trigger: AATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCAG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAATCTGCAGGGAAGCCTaGCGGGTTATGCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSICREA*RVMLYS
Trigger: GCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGAT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CAGGGACGGGGCTGGGCACGGAGCTCTCCAGTTCATCCAAGAGACTCTCCACACATCTGCAGGGAAGCCTaGCGGGTTATGCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: QGRGWARSSPVHPRDSPHICREA*RVMLYS
Trigger: GCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGAT...GTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGGGGCTGTTAGTCTCTaGGACACCATAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWGAVSL*DTIEGA
Trigger: AGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TGGGGCCGTTGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WGRCSSSSAGRRGCGSPFRDSPH*AARPPG
Trigger: GCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCT...AAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPRDSPH*AARPPG
Trigger: GCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AGCACGGAGAGCCAACACTGTCCTGAGGGTTGGAGACACTGGAAGTTTTGGCACTGGCAGGGACGGGGCTaGGCACGGAGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: STESQHCPEGWRHWKFWHWQGRG*ARSSPV
Trigger: AACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCA...GTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTGGCAGGGACGGGGCTaGGCACGGAGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVWQGRG*ARSSPV
Trigger: AACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWMRVCC*VEVTRC
Trigger: GCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCGTCCAGCTCCCTGGTaGCAGAGGAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVRPAPW*QRRPRC
Trigger: GCATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGACCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 4 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGCCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 4 (lower is better)
Translates to: KKCSGCHVRSRAVTTLSRPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTTGCCGTCCTTCTCGTaGAACCCTTCGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTLPSFS*NPSGPK
Trigger: CTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWRSRHT*VRTCRS
Trigger: ACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLPVMGF*QPEHSE
Trigger: CTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGCCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQPVMGF*QPEHSE
Trigger: CTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGG...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGAGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCTTGGTAAAGAGCTCTaGGGGGTTTCCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSLGKEL*GVSPEE
Trigger: CTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCTTGGTAAAGAGCTCTaGGGGGTTTCCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGLGKEL*GVSPEE
Trigger: CTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCTGGGCCATGAACTGTaGACACGGAGGGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPLGHEL*TRRGLV
Trigger: GACCAGCCCCCTCCGTGTCCACAGTTCATGGCCCAG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGAAGGACGGAGCAGAGCTaGACAGCCCCGGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: RSVQGATSGQGLSPLYPGRTEQS*TAPGHS
Trigger: TGAGTGCCCCGGGGCTGTCCAGCTCTGCTCCGTCCT...TCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGAGGACGGAGCAGAGCTaGACAGCCCCGGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVRTEQS*TAPGHS
Trigger: TGAGTGCCCCGGGGCTGTCCAGCTCTGCTCCGTCCT...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCCTTCCCGTCCTGGGTaGCAGCTTCCGTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVPSRPG*QLPWCP
Trigger: AGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTCCTTGCGACAGTAGGCCTTGCCGTCCTTCTCGTGGAACCCTTCGGGACCAAATGTTCCTTCCCGTCCTaGGTGGCAGCTTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: VLATVGLAVLLVEPFGTKCSFPS*VAASVV
Trigger: CACCACGGAAGCTGCCACCCAGGACGGGAAGGAACA...TTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGGCACATGGAAGCTCTaGCTGTTCCTTCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRGTWKL*LFLPVL
Trigger: CAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTGGAAATCCTCTCCGTaGTGCTGGGTGTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRWKSSP*CWVCPW
Trigger: CCATGGGCACACCCAGCACCACGGAGAGGATTTCCA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGGAGCTGTTCCTGGGATaGGGTCCTGCTCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQELFLG*GPAQGG
Trigger: GCCACCTTGAGCAGGACCCCATCCCAGGAACAGCTC...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTCGGTCAGCCAGTCCTaGGCAGAGGGCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDSVSQS*AEGPAA
Trigger: GGCGGCGGGGCCCTCTGCCCAGGACTGGCTGACCGA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGCGTCTGTGCGATGCTaGAGCAAAGGGACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTASVRC*SKGTEG
Trigger: TCCTTCTGTCCCTTTGCTCCAGCATCGCACAGACGC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGACGGACCTCATGGTGTaGGGTGCAGGAATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRTDLMV*GAGMGR
Trigger: CCTTCCCATTCCTGCACCCCACACCATGAGGTCCGT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGGGTCCTCATCAGTCTaGCAGCCCACGGACCTCATG +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLGSSSV*QPTDLM
Trigger: CATGAGGTCCGTGGGCTGCCAGACTGATGAGGACCC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGAGGAGACAGGTTTCTaGTCTCCCTTCTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVEETGF*SPFWSG
Trigger: GCCACTCCAGAAGGGAGACCAGAAACCTGTCTCCTC...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR CCA 90 bp GGTTATGCTGTACAGCGTTCAGTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTAATCGAGGTCGTCCATaGCCGGACCACGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GYAVQRSVPAAGGRVQKGNRGRP*PDHGRR
Trigger: CCGGCGCCCGTGGTCCGGCCATGGACGACCTCGATT...ACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGCAAGGATTGTGCCATTaGGGGCCTCGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQQGLCH*GPRWTG
Trigger: CCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTG...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVEAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCATGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCACCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSSPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GTCCTTGCGACAGTAGGCCTTGCCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGGCCATGTTCCTCCGTaGGAGTCCAGGTATCTGGGA +
Preference number: 4 (lower is better)
Translates to: VLATVGLAVLLVEPFGTKGHVPP*ESRYLG
Trigger: TCCCAGATACCTGGACTCTCACGGAGGAACATGGCC...TTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGCCAAGTCGTGTCTCTaGGGAGTGACTGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRAKSCL*GVTAVF
Trigger: GAACACTGCAGTCACTCCTCAGAGACACGACTTGGC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR GCA 90 bp AGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGACGGGAGCTGCTGGGCTaGCACTGGTCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RSVQGATSGQGLSPLYPGRELLG*HWSKGS
Trigger: TGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCG...TCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR GCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGTGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWCCPGT*SLRWVK
Trigger: CTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCA...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCGAGTTCAGAAAGGTTaGTGCCCAGGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRRVQKG*CPGTCS
Trigger: TGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GCGTTCAGTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACCGAGTTCAGAAAGGTTaGTGCCCAGGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AFSSSSRRSSSERLLPRDRVQKG*CPGTCS
Trigger: TGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG...GTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGCCGAGATGCGTGTCTaGTGTTGGGTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDAEMRV*CWVEVT
Trigger: CGTCACCTCCACCCAACAGCAGACACGCATCTCGGC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATGTCGAAGTAGTCCTTaGGACAGTAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSCRSSP*DSRPCR
Trigger: ACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGTKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWVPLLS*LRQKAQ
Trigger: CTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRVPLLS*LRQKAQ
Trigger: CTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGAGGCCTCGTCCACTCTaGTCAGTACAAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWRPRPL*SVQGNS
Trigger: GGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCCT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGCTCTTGGAGAGCTGTaGTCCCAGCACAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVALGEL*SQHRVQ
Trigger: CTGTACCCTGTGCTGGGAGCACAGCTCTCCAAGAGC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGAAATCCTCTCCGTGGTaGTGGGTGTGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQKSSPW*WVCPWP
Trigger: TGGCCATGGGCACACCCAGCACCACGGAGAGGATTT...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCACCGGGACATGGGGTGTaGGTGGCCAGACTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VRLVVLLLEGALVELLEAPGHGV*VARLPA
Trigger: AGCTGGGAGTCTGGCCACGCACACCCCATGTCCCGG...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCGCGGCGTCTGTGCGATaGTGGAGCAAAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCAASVR*WSKGTE
Trigger: TTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGC...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GTCCTTGCGACAGTAGGCCTTGCCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGCGGCGTCTGTGCGATaGTGGAGCAAAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: VLATVGLAVLLVEPFGTKAASVR*WSKGTE
Trigger: TTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGC...TTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GCAGTACTGAGGACCAGTCGAGGAAGGAGCAGACATGGGTGGACCCACAGAAAATCCCCATCCGCTCTTTaGTCCAGGCCCTGGATCGGG +
Preference number: 4 (lower is better)
Translates to: AVLRTSRGRSRHGWTHRKSPSAL*SRPWIG
Trigger: CCCGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGA...TTTTCTGTGGGTCCACCCATGTCTGCTCCTTCCTCGACTGGTCCTCAGTACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCGTCGAGGTCGTCCATaGCCGGACCACGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFRRGRP*PDHGRR
Trigger: CCGGCGCCCGTGGTCCGGCCATGGACGACCTCGACG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000637617.2
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCTGCTGGGCTGCCACTaGTCTAAGGGGTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRLLGCH*SKGSRI
Trigger: AATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCAG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSEGWRH*KFWHWS
Trigger: GCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CAGCAGCAGGCGGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACGTGCTCATTACGGGGCTGTTAGTCTCTaGGACACCATAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: QQQAVEFRKVAAQGRAHYGAVSL*DTIEGA
Trigger: AGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCC...GTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQRDSPH*AARPPG
Trigger: GCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPMRVCC*VEVTRC
Trigger: GCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCATCTGCAGGGAAGCCTGGCGGGTTATGCTGTACAGCGTTCAGTTCCAGCAGCATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSAGKPGGLCCTAFSSSSMRVCC*VEVTRC
Trigger: GCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT...GCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDMRVCC*VEVTRC
Trigger: GCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGATCTCCTCCTGGCAGTaGGTGCAGACGAAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLISSWQ*VQTKCS
Trigger: CGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGAT...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTTGCCGTCCTTCTCGTaGAACCCTTCGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRLPSFS*NPSGPK
Trigger: CTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCACCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VRLVVLLLEGALVELLEAPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACAAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCTTGGTAAAGAGCTCTaGGGGGTTTCCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWLGKEL*GVSPEE
Trigger: CTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCAGGAGCCCAAGGCCTaGCTCCTCTTTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVQEPKA*LLFHPW
Trigger: CCAAGGATGAAAGAGGAGCCAGGCCTTGGGCTCCTG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCTGGCAGCACAGGGATaGGGGTACTTTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLLAAQG*GYFSPS
Trigger: GGAGGGAGAAAAGTACCCCCATCCCTGTGCTGCCAG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCGGGGTACGGTGTCTaGCAGCACAGGGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVSGYGV*QHRDGG
Trigger: ACCCCCATCCCTGTGCTGCCAGACACCGTACCCCGA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR CCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGCACAGGGTACAGTGTaGCAGCGGGGAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VRLVVLLLEGALVELLEAAQGTV*QRGAPE
Trigger: CTCTGGGGCTCCCCGCTGCCACACTGTACCCTGTGC...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTACCTCCGAAGCCCATaGCTGCTCCCATGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYYLRSP*LLPCGS
Trigger: GCTGCCACATGGGAGCAGCCATGGGCTTCGGAGGTA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp TGGGGCCGTTGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTGGGGTTTCAGGTCCCTaGGTTGGCCTGGCCACACTT +
Preference number: 4 (lower is better)
Translates to: WGRCSSSSAGRRGCGSPFGVSGP*VGLATL
Trigger: AAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCC...AAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACTGTTCCTTCCCGTCCTaGGTGGCAGCTTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDCSFPS*VAASVV
Trigger: CACCACGGAAGCTGCCACCCAGGACGGGAAGGAACA...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGGTGTGCCCATGGCCATaGCACATGGAAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQVCPWP*HMEALA
Trigger: AGCCAGAGCTTCCATGTGCCATGGCCATGGGCACAC...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCTGCTGGGTGTGCCCATaGCCATGGCACATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCCWVCP*PWHMEA
Trigger: AGCTTCCATGTGCCATGGCCATGGGCACACCCAGCA...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGAGACATGGGGTGTGCGTaGCCAGACTCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGDMGCA*PDSQLL
Trigger: GAGGAGCTGGGAGTCTGGCCACGCACACCCCATGTC...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAGCCCACGGACCTCATaGTGTGGGGTGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPSPRTS*CGVQEW
Trigger: CCATTCCTGCACCCCACACCATGAGGTCCGTGGGCT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACGCCCTGGTTCACAGTaGTGGCAGGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRRPGSQ*WQGRGW
Trigger: CCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGCTGTTGGGTGGAGGTaGCGCGCTGCGGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDAVGWR*RAAGCS
Trigger: TGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGQRVEG*DIVLQD
Trigger: ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCACAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPQRVEG*DIVLQD
Trigger: ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTG...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 4 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLRRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TGGGGCCGTTGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: WGRCSSSSAGRRGCGSPFCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...AAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp AAGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGTCTTTCCAGACCCCCTaGGTGCCGATCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: KKCSGCHVRSRAVTTLSRSFQTP*VPIPPV
Trigger: CACAGGTGGGATCGGCACTCAGGGGGTCTGGAAAGA...CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACC +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPGKACG*KWRHQT
Trigger: GGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYGKACG*KWRHQT
Trigger: GGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TGCTCATTACGGTGGGTGAAGGCTCAGCTGATTTCTGCTTGTTGGGGAAGCTGTCCGCGCAGCCGCGAGTaGAGTGCCTGTCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: CSLRWVKAQLISACWGSCPRSRE*SACLEL
Trigger: GAGTTCCAGACAGGCACTTCACTCGCGGCTGCGCGG...ACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSVQKGC*PGTCSL
Trigger: TAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAAC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGVQKGC*PGTCSL
Trigger: TAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAAC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCGAGTTCAGAAAGGTTaGTGCCCAGGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWRVQKG*CPGTCS
Trigger: TGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGAAGCCTGGCGGGTTATaGTGTACAGCGTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRKPGGL*CTAFSS
Trigger: GGAACTGAACGCTGTACAGCATAACCCGCCAGGCTT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGCAGAGGAGGCCGAGATaGGTGTCTGCTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQQRRPR*VSAVGW
Trigger: CCACCCAACAGCAGACACGCATCTCGGCCTCCTCTG...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGAAGAAGTGTTCAGGGTaGCACGTCCGGTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVKKCSG*HVRSRA
Trigger: AGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTGTCGAAGTAGTCCTTaGGACAGTAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRCRSSP*DSRPCR
Trigger: ACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWTKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRTKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLVPLLS*LRQKAQ
Trigger: CTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAACCGTGGTGCTGGGTGTaGCCATGGCCATGGCACATG +
Preference number: 4 (lower is better)
Translates to: RLVVLLLEGALVELLEAEPWCWV*PWPWHM
Trigger: CATGTGCCATGGCCATGGGCACACCCAGCACCACGG...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACAAATCCTCTCCGTGGTaGTGGGTGTGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDKSSPW*WVCPWP
Trigger: TGGCCATGGGCACACCCAGCACCACGGAGAGGATTT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGGCACAGACGAAGTGCTCGTGGGCCTTCCCACTCTaGACCAAGAGTGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LKVPLLSCLRQKAQTKCSWAFPL*TKSGAS
Trigger: ACTGGCCCCACTCTTGGTGCAGAGTGGGAAGGCCCA...CGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGTGGCCGCGGCGTCTGTaGGATGCTGGAGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRWPRRL*DAGAKG
Trigger: TCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCA...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTCTCTGAGGAGTGACTaGAGTGTTCCAGGCATCACG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWSLRSD*SVPGIT
Trigger: CGTGATGCCTGGAACACTGCAGTCACTCCTCAGAGA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR CCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGCACGGCAATCTCCTaGTATGTGTGGTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVGTAIS*YVWFPV
Trigger: AACTGGAAACCACACATACCAGGAGATTGCCGTGCC...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGGCACGGCAATCTCCTaGTATGTGTGGTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSGTAIS*YVWFPV
Trigger: AACTGGAAACCACACATACCAGGAGATTGCCGTGCC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGGCACGGCAATCTCCTaGTATGTGTGGTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTGTAIS*YVWFPV
Trigger: AACTGGAAACCACACATACCAGGAGATTGCCGTGCC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCTGCTGGGCTGCCACTaGTCTAAGGGGTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWLLGCH*SKGSRI
Trigger: AATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCAG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTGGAAGTTTTGGCACTaGAGCCGTACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTWKFWH*SRTQVM
Trigger: CATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CGGCCCCCATTCCGCTTAGGCTTCTCTTTCGTCAGGGGCCCAGCTTTGCCTCCCCTGATTTCTGCTTGTTaGGGAAGCTGTAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: RPPFRLGFSFVRGPALPPLISAC*GSCRRA
Trigger: AGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAG...GGGAGGCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSTCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGATCTGCAGGGAAGCCTaGCGGGTTATGCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVICREA*RVMLYS
Trigger: GCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGAT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYLLISP*FTVMAG
Trigger: CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGCAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTTGCCGTCCTTCTCGTaGAACCCTTCGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLLPSFS*NPSGPK
Trigger: CTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYRSRHT*VRTCRS
Trigger: ACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCATATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VRLVVLLLEGALVELLEAYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGCCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQPVMGF*QPEHSE
Trigger: CTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGG...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGCCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGCTGGGCACGAAGGGCTaGCTGGTGGCCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPLGTKG*LVAPGA
Trigger: AGCCCCAGGGGCCACCAGCCAGCCCTTCGTGCCCAG...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGGCTCTGTTACTTCTTaGAAGCTTCGAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTGSVTS*KLRAAP
Trigger: TGGAGCTGCTCGAAGCTTCCAAGAAGTAACAGAGCC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACAGGTATCTGGGAAGATaGCCTGCCGGTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYRYLGR*PAGPLP
Trigger: TGGCAGTGGACCGGCAGGCCATCTTCCCAGATACCT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp TTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGGCACAGACGAAGTGCTCGTTCAGGTCCCTGGGTTaGCCTGGCCACACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LKVPLLSCLRQKAQTKCSFRSLG*PGHTSP
Trigger: AGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAA...CGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGACATGGGGTGTGCGTaGCCAGACTCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VRLVVLLLEGALVELLEADMGCA*PDSQLL
Trigger: GAGGAGCTGGGAGTCTGGCCACGCACACCCCATGTC...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGGGTCCTGCTCAAGGTaGCAGGGTCCAGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKGSCSR*QGPAGG
Trigger: GCCGCCGGCTGGACCCTGCCACCTTGAGCAGGACCC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGCCAGGTGCTTGGCTCTaGCCCAGCCCCAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLPGAWL*PSPSHG
Trigger: CCCATGGCTGGGGCTGGGCCAGAGCCAAGCACCTGG...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAAAGCCAGGACAGAGATaGTTCTTCTCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPKPGQR*FFSGEW
Trigger: CCATTCCCCTGAGAAGAACCATCTCTGTCCTGGCTT...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGCGTCTGTGCGATGCTaGAGCAAAGGGACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWASVRC*SKGTEG
Trigger: TCCTTCTGTCCCTTTGCTCCAGCATCGCACAGACGC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGGGGAGAAGAGCTGCTaGCCGCGGCGTCTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEGEKSC*PRRLCD
Trigger: ATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGATGCACCCCCTCATCATaGGGCTCTTCCCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGCTPSS*GSSPAL
Trigger: GAGTGCAGGGGAAGAGCCCCATGATGAGGGGGTGCA...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCTCCCTGTCTTCCCCTaGGCCATGAACTTGAAATCC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWLPVFP*AMNLKS
Trigger: GGATTTCAAGTTCATGGCCCAGGGGAAGACAGGGAG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424649.6
ENST00000458477.6
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGGAGAGGATGCAGTCCTaGGGCACAGAGACACAAGAT +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWERMQS*GTETQD
Trigger: ATCTTGTGTCTCTGTGCCCCAGGACTGCATCCTCTC...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR CCA 90 bp GGGCTGTCCATCCCGCTCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGTTCTGGTCTCCCTTCTaGAGTGGCTTCTTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GLSIPLEEVPGSDLLLAVFWSPF*SGFFPR
Trigger: TCGAGGAAAGAAGCCACTCCAGAAGGGAGACCAGAA...CACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGGCTTCTTTCCTCGATaGGAGCCCGGGGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVGFFPR*EPGAVL
Trigger: CAGTACTGCCCCGGGCTCCCATCGAGGAAAGAAGCC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR CAA 72 bp TTCCGCTTAGGCTTCTCTTTCGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTAGTCTCTGGGACACCA +
Preference number: 4 (lower is better)
Translates to: FRLGFSFVRGPA*PPKGLLVSGTP
Trigger: TGGTGTCCCAGAGACTAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGTTTCCAGTTGGGTATaGGTAGGGGGTCTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDVSSWV*VGGLLR
Trigger: TCGGAGGAGACCCCCTACTCATACCCAACTGGAAAC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEEAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp AGCTTTGCCTCCCAAGGGGCTGTTAGTCTCTGGGACACCATAGAGGGGGCTCAGACAGGTGATGAGGACTaGGGCTGCTGGTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: SFASQGAVSLWDTIEGAQTGDED*GCWWMN
Trigger: ATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGT...CTGAGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAGGCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGCTGTTGGGTGGAGGTaGCGCGCTGCGGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKAVGWR*RAAGCS
Trigger: TGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDRSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGCCTAGCAGAAGAGCTTaGGGAAGCAGTTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRPSRRA*GSSSDS
Trigger: ACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGG...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCAGAGCCACCATCAGTaGCAGGCCCAGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDQSHHQ*QAQWRW
Trigger: CCACCGCCACTGGGCCTGTCACTGATGGTGGCTCTG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACC +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQGKACG*KWRHQT
Trigger: GGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCATTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: RWASCRPRRLLWRLWRPPFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTCCCTCCTGGACAGATaGGCTGATGGAGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLSLLDR*ADGDKK
Trigger: CTTCTTGTCTCCATCAGCTCATCTGTCCAGGAGGGA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR TCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCACAGAGGGAGACCTTaGGTTGAAGGTGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWHRGRP*VEGVRH
Trigger: ATGCCTGACACCTTCAACTCAAGGTCTCCCTCTGTG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQCCPGT*SLRWVK
Trigger: CTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GAGCTCTCCAGTTCATCCAAGAGACTCTCCACACTGGGCCGCACGTCCTCCAGGGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: ELSSSSKRLSTLGRTSSRVQKGC*PGTCSL
Trigger: TAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAAC...CCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR GCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCGAGTTCAGAAAGGTTaGTGCCCAGGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPRVQKG*CPGTCS
Trigger: TGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCATCCGCTCTTTaGTCCAGGCCCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVSPSAL*SRPWIL
Trigger: CAAGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACAAGAAGTGTTCAGGGTaGCACGTCCGGTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYKKCSG*HVRSRA
Trigger: AGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTGTCGAAGTAGTCCTTaGGACAGTAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLCRSSP*DSRPCR
Trigger: ACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGACCCCAACAGACCCTaGCTGCCCTTCCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFDPNRP*LPFPAP
Trigger: GGGGGCAGGGAAGGGCAGGCAGGGTCTGTTGGGGTC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGACTCTCTGTGCCCACTaGCCACAGAGAACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVTLCAH*PQRTLH
Trigger: GTGGAGGGTTCTCTGTGGGCAGTGGGCACAGAGAGT...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACCGGGACATGGGGTGTaGGTGGCCAGACTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRPGHGV*VARLPA
Trigger: AGCTGGGAGTCTGGCCACGCACACCCCATGTCCCGG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTGGAAGTTTTGGCACTaGAGCCGTACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWWKFWH*SRTQVM
Trigger: CATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTGCTTGTTGGGGAAGCTGTAGACGTGCTCCTCCTCACCCACTCGGGAGCACGTGGAAGTTTTGGCACTaGAGCCGTACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: SACWGSCRRAPPHPLGSTWKFWH*SRTQVM
Trigger: CATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCA...CGTGCTCCCGAGTGGGTGAGGAGGAGCACGTCTACAGCTTCCCCAACAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp TCTGCTTGTTGGGGAAGCTGTAGACGTGCTCCTCCTCACCCACTCGGGAGCACGAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 4 (lower is better)
Translates to: SACWGSCRRAPPHPLGSTRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...CGTGCTCCCGAGTGGGTGAGGAGGAGCACGTCTACAGCTTCCCCAACAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVEGWRH*KFWHWS
Trigger: GCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCTGATTTCTGCTTGTTaGGGAAGCTGTAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSLISAC*GSCRRA
Trigger: AGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCATCTGCAGGGAAGCCTaGCGGGTTATGCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPICREA*RVMLYS
Trigger: GCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGAT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGGCACAGACGAAGTGCTCGGGGGCTGTTAGTCTCTaGGACACCATAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LKVPLLSCLRQKAQTKCSGAVSL*DTIEGA
Trigger: AGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCC...CGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTGGCAGGGACGGGGCTaGGCACGGAGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSWQGRG*ARSSPV
Trigger: AACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGTGGCAGGGACGGGGCTaGGCACGGAGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLWQGRG*ARSSPV
Trigger: AACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCA...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCGTCCAGCTCCCTGGTaGCAGAGGAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRPAPW*QRRPRC
Trigger: GCATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCTTTGCTCCAGGCCCTaGATCTTGAAATCCGACAGC +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWLCSRP*ILKSDS
Trigger: GCTGTCGGATTTCAAGATCCAGGGCCTGGAGCAAAG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGAGCATGCTGTCCAGCTaGCTCCCGGGCTTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPSMLSS*LPGFGG
Trigger: GCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGCTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KKCSGCHVRSRAVTTLSRLLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGCAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGATCTCCTCCTGGCAGTaGGTGCAGACGAAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQISSWQ*VQTKCS
Trigger: CGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGAT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TGGGGCCGTTGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTTTGCCGTCCTTCTCGTaGAACCCTTCGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: WGRCSSSSAGRRGCGSPFLPSFS*NPSGPK
Trigger: CTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAA...AAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGATCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: KKCSGCHVRSRAVTTLSRTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTGGCAGAAATACAGATaGCATGGGAGGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWWQKYR*HGRRRR
Trigger: CCTTCTCCTCCTCCCATGCCATCTGTATTTCTGCCA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGGTATAGTGGTGGGTaGCAGAAATACAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSGYSGG*QKYRWH
Trigger: ATGCCATCTGTATTTCTGCCACCCACCACTATACCC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAAGCCAAGGCCTCCTCTaGGCACGAAGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRSQGLL*ARRAGW
Trigger: CCAGCCAGCCCTTCGTGCCCAGAGGAGGCCTTGGCT...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAATTCAGGTCCCTGGGTTaGCCTGGCCACACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RLVVLLLEGALVELLEAEFRSLG*PGHTSP
Trigger: AGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAA...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGGGGTTTCAGGTCCCTaGGTTGGCCTGGCCACACTT +
Preference number: 4 (lower is better)
Translates to: RLVVLLLEGALVELLEAEGVSGP*VGLATL
Trigger: AAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCC...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGGTGTGCCCATGGCCATaGCACATGGAAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KKCSGCHVRSRAVTTLSRVCPWP*HMEALA
Trigger: AGCCAGAGCTTCCATGTGCCATGGCCATGGGCACAC...CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGAGCGATGAGCTGTTCCTaGGATGGGGTCCTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RSVQGATSGQGLSPLYPGAMSCS*DGVLLK
Trigger: CTTGAGCAGGACCCCATCCCAGGAACAGCTCATCGC...TCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGGGCCCGCTTCCCACGTaGCTGCACAGTGATGATGAC +
Preference number: 4 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRGPLPT*LHSDDD
Trigger: GTCATCATCACTGTGCAGCCACGTGGGAAGCGGGCC...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGACTCTGCACCAAGAGTaGGGCCAGTCTTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWTLHQE*GQSSKV
Trigger: GACTTTGGAAGACTGGCCCCACTCTTGGTGCAGAGT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCAGGAGGCGAGCAGGCTaGGCAGGGGAGAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSRRRAG*AGEKSC
Trigger: GCAGCTCTTCTCCCCTGCCCAGCCTGCTCGCCTCCT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGAGGAGGCGAGCAGGCTaGGCAGGGGAGAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLRRRAG*AGEKSC
Trigger: GCAGCTCTTCTCCCCTGCCCAGCCTGCTCGCCTCCT...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGGGGTCCTCATCAGTCTaGCAGCCCACGGACCTCATG +
Preference number: 4 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRGSSSV*QPTDLM
Trigger: CATGAGGTCCGTGGGCTGCCAGACTGATGAGGACCC...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGAAGAAGTTCCGGGATCCGATCTCCTCCTGGCAGTGGGTGCAGACGAAGTGCAGGAAGGAGCAGACATaGGTGGACCCACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SKKFRDPISSWQWVQTKCRKEQT*VDPQKS
Trigger: GCTTTTCTGTGGGTCCACCCATGTCTGCTCCTTCCT...GCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
3UTR CAA 72 bp TTCAGTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTaGCTGCCCAGGGACGTGCTCATTACGGTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: FSSSSRRSSSER*LPRDVLITVGE
Trigger: TTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGTTTCCAGTTGGGTATaGGTAGGGGGTCTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVVSSWV*VGGLLR
Trigger: TCGGAGGAGACCCCCTACTCATACCCAACTGGAAAC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACAAGGATTGTGCCATTaGGGGCCTCGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRQGLCH*GPRWTG
Trigger: CCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACACAGGTGATGAGGACTaGGGCTGCTGGTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDTGDED*GCWWMN
Trigger: ATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLQRVEG*DIVLQD
Trigger: ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GCAGTACTGAGGACCAGTCGAGGAAGGAGCAGACATGGGTGGACCCACAGAAAACGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: AVLRTSRGRSRHGWTHRKRSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...TTTTCTGTGGGTCCACCCATGTCTGCTCCTTCCTCGACTGGTCCTCAGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCCTAGCAGAAGAGCTTaGGGAAGCAGTTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLPSRRA*GSSSDS
Trigger: ACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYSPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGTATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGGGGCCAGGAGCCCTTaGAATCCGACAGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDGARSP*NPTAKP
Trigger: TGGCTTCGCTGTCGGATTTCAAGGGCTCCTGGCCCC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267257.11
CDS-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGGGGCCGCTCGTCTATaGCCCGCAACTTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKGAARL*PATFPP
Trigger: CGGCGGAAAAGTTGCGGGGCATAGACGAGCGGCCCC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000637617.2
CDS-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGCGAGTTCAGAAAGGTTaGTGCCCAGGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQRVQKG*CPGTCS
Trigger: TGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGATTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRRWAS*RPRRLL
Trigger: AAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACCAGGATGGGGCCGTTaGAGTAGTAGCAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKPGWGR*SSSSAG
Trigger: CCCCGCGCTGCTACTACTGCAACGGCCCCATCCTGG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPTKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVLGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGACCCTGACTCTCTGTaGCCACTGCCCACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: VRLVVLLLEGALVELLEADPDSL*PLPTEN
Trigger: GTTCTCTGTGGGCAGTGGGCACAGAGAGTCAGGGTC...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR GCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCTCAAAGACGCATTGTaGCTGATGAAGCTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWLKDAL*LMKLSR
Trigger: CCTGCTTAGCTTCATCAGGCACAATGCGTCTTTGAG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR GCA 90 bp CATCTGCAGGGAAGCCTGGCGGGTTATGCTGTACAGCGTTCAGTTCCAGCAGCACAGCCGCGAGTGAAGTaGCTGTCTGGAACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: HLQGSLAGYAVQRSVPAAQPRVK*LSGTLN
Trigger: ATTCAGAGTTCCAGACAGGCACTTCACTCGCGGCTG...TGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGATCTCCTGGTATGTGTaGTTTCCAGTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSISWYV*FPVGYE
Trigger: CTCATACCCAACTGGAAACCACACATACCAGGAGAT...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAATCTCCTGGTATGTGTaGTTTCCAGTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSISWYV*FPVGYE
Trigger: CTCATACCCAACTGGAAACCACACATACCAGGAGAT...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GGGCCCAGCTTTGCCTCCCAAGGGGCTGTTAGTCTCTGGGACACCATAGAGGGGATCTCCTGGTATGTGTaGTTTCCAGTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: GPSFASQGAVSLWDTIEGISWYV*FPVGYE
Trigger: CTCATACCCAACTGGAAACCACACATACCAGGAGAT...CCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAGGCAAAGCTGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp AGTTCAGAAAGGTTGCTGCCCAGGGACGTGCTCATTACGGTGGGTGAAGGCTCACTGCTGGGCTGCCACTaGTCTAAGGGGTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: SSERLLPRDVLITVGEGSLLGCH*SKGSRI
Trigger: AATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCAG...TGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVTCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSRDSPH*AARPPG
Trigger: GCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCGTCCAGCTCCCTGGTaGCAGAGGAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFRPAPW*QRRPRC
Trigger: GCATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCTTTGCTCCAGGCCCTaGATCTTGAAATCCGACAGC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYLCSRP*ILKSDS
Trigger: GCTGTCGGATTTCAAGATCCAGGGCCTGGAGCAAAG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS-3UTR CCA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGCTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRLLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTTGCCGTCCTTCTCGTaGAACCCTTCGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQLPSFS*NPSGPK
Trigger: CTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTTGCCGTCCTTCTCGTaGAACCCTTCGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVLPSFS*NPSGPK
Trigger: CTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAACGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RLVVLLLEGALVELLEAERSRHT*VRTCRS
Trigger: ACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCG...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACATTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCCAAATCAAGCCAGCTaGGGGCTACAGGAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPPNQAS*GLQEVE
Trigger: TTCTACCTCCTGTAGCCCCCAGCTGGCTTGATTTGG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGGCTCTGTTACTTCTTaGAAGCTTCGAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLGSVTS*KLRAAP
Trigger: TGGAGCTGCTCGAAGCTTCCAAGAAGTAACAGAGCC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCATGGCCATGGCACATaGAAGCTCTGGCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYHGHGT*KLWLFL
Trigger: AAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTCCTCTCCGTGGTGCTaGGTGTGCCCATGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSSSPWC*VCPWPW
Trigger: CCATGGCCATGGGCACACCCAGCACCACGGAGAGGA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGATCACAGATCGGATCTaGCCAGAGGTGGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQITDRI*PEVEIL
Trigger: GAGGATTTCCACCTCTGGCCAGATCCGATCTGTGAT...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGGCGATGAGCTGTTCCTaGGATGGGGTCCTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRAMSCS*DGVLLK
Trigger: CTTGAGCAGGACCCCATCCCAGGAACAGCTCATCGC...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACTCAGCCCACAGGGGTaGCGGGACCTCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRLSPQG*RDLPRL
Trigger: GAGCCTGGGGAGGTCCCGCCACCCCTGTGGGCTGAG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTTCTTCTCAGGGGAATaGGAGAGCCAGGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPFFSGE*ESQEGR
Trigger: TCTTCCCTCCTGGCTCTCCCATTCCCCTGAGAAGAA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTGCACATCCACTGCTTaGGACAGAGGACCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPCTSTA*DRGPSK
Trigger: CTTGGAAGGTCCTCTGTCCCAAGCAGTGGATGTGCA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACAAGGATTGTGCCATTaGGGGCCTCGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKQGLCH*GPRWTG
Trigger: CCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGACAGGTGATGAGGACTaGGGCTGCTGGTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQTGDED*GCWWMN
Trigger: ATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGCTGTTGGGTGGAGGTaGCGCGCTGCGGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRAVGWR*RAAGCS
Trigger: TGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGTGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGATTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWECRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCATTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGAGGGAGACCTTGAGTTaGAGGTGTCAGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRRETLS*RCQASP
Trigger: GGGTGATGCCTGACACCTTCAACTCAAGGTCTCCCT...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGCACAGAGGGAGACCTTaGGTTGAAGGTGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVHRGRP*VEGVRH
Trigger: ATGCCTGACACCTTCAACTCAAGGTCTCCCTCTGTG...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACAGATCCCTAGGCTGGTaGAGTATTGGTGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYRSLGW*SIGERM
Trigger: CATCCTCTCACCAATACTTCACCAGCCTAGGGATCT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR TCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGCCTTGTCAAACATTTTaGATCAGGGACTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSPCQTF*IRDSTK
Trigger: TTTGGTGGAGTCCCTGATTCAAAATGTTTGACAAGG...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR GCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGCGGGAGCTGCTGGGCTaGCACTGGTCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPRELLG*HWSKGS
Trigger: TGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCG...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCGGGAGCTGCTGGGCTaGCACTGGTCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFRELLG*HWSKGS
Trigger: TGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWECCPGT*SLRWVK
Trigger: CTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGCCGAGATGCGTGTCTaGTGTTGGGTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSAEMRV*CWVEVT
Trigger: CGTCACCTCCACCCAACAGCAGACACGCATCTCGGC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGCCGAGATGCGTGTCTaGTGTTGGGTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDAEMRV*CWVEVT
Trigger: CGTCACCTCCACCCAACAGCAGACACGCATCTCGGC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCAGAGGAGGCCGAGATaGGTGTCTGCTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSQRRPR*VSAVGW
Trigger: CCACCCAACAGCAGACACGCATCTCGGCCTCCTCTG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGTGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: RLVVLLLEGALVELLEAEVPLLS*LRQKAQ
Trigger: CTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACGCTTCCCACGTGGCTaGACAGTGATGATGACGCCC +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRRFPRG*TVMMTP
Trigger: GGGCGTCATCATCACTGTGCAGCCACGTGGGAAGCG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAACCTTCTCTACGAGCTaGCCCCCGGCCCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSETFSTS*PPARFP
Trigger: TGGGAAGCGGGCCGGGGGGCAGCTCGTAGAGAAGGT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACAAACTGCACATCCACTaGTTGGGACAGAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDKLHIH*LGQRTF
Trigger: GAAGGTCCTCTGTCCCAAGCAGTGGATGTGCAGTTT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR GCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCACAGATGGTATAACTaGGGTTCAGAGGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLHRWYN*GSEAES
Trigger: TGACTCTGCCTCTGAACCGCAGTTATACCATCTGTG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR GCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGAGACCTGAGTTCAAGTaGCAGCTCCCCTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQRPEFK*QLPSLP
Trigger: TGGTAGAGAGGGGAGCTGGCACTTGAACTCAGGTCT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGGCACGGCAATCTCCTaGTATGTGTGGTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYGTAIS*YVWFPV
Trigger: AACTGGAAACCACACATACCAGGAGATTGCCGTGCC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGGCACAGACGAAGTGCTCGGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: LKVPLLSCLRQKAQTKCSEGWRH*KFWHWS
Trigger: GCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTC...CGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCTGATTTCTGCTTGTTaGGGAAGCTGTAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWLISAC*GSCRRA
Trigger: AGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCTGATTTCTGCTTGTTaGGGAAGCTGTAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLLISAC*GSCRRA
Trigger: AGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDTCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPTCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYTCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTTCTGCTTGTTGGGGAAGCTGTAGACGTGCTCCTCCTCACCCACTCGGGAGCAACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: FLLVGEAVDVLLLTHSGATCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...TGCTCCCGAGTGGGTGAGGAGGAGCACGTCTACAGCTTCCCCAACAAGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKRDSPH*AARPPG
Trigger: GCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATGGCAGGGACGGGGCTaGGCACGGAGCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEWQGRG*ARSSPV
Trigger: AACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWELLISP*FTVMAG
Trigger: CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSMRVCC*VEVTRC
Trigger: GCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACTCCCTGTCTTCCCCTaGGCCATGAACCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKLPVFP*AMNPPS
Trigger: CGAGGGAGGGTTCATGGCCCAGGGGAAGACAGGGAG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228307.11
ENST00000323871.9
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTCCCTGTCTTCCCCTaGGCCATGAACCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFLPVFP*AMNPPS
Trigger: CGAGGGAGGGTTCATGGCCCAGGGGAAGACAGGGAG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228307.11
ENST00000323871.9
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAAGCATGCTGTCCAGCTaGCTCCCGGGCTTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRSMLSS*LPGFGG
Trigger: GCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACCCCGCAGACTCCTTTaGCGACTGTGGCGACCCCCA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEPRRLL*RLWRPP
Trigger: TGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACAACCTGCCCGGCGATaGGCTTCTTGCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRQPARR*ASCRPR
Trigger: GCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEDPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTATAGTTCTCCAGGATaGCCCGGGCGCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFYSSPG*PGRSRH
Trigger: GTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGTACATGGGCTGGGGTaGAGCCCCCAGCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEVHGLG*SPQPLP
Trigger: GGGTAGAGGCTGGGGGCTCCACCCCAGCCCATGTAC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGGGACGTACATGGGCTaGGGTGGAGCCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRGTYMG*GGAPSL
Trigger: GAGGCTGGGGGCTCCACCCCAGCCCATGTACGTCCC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSESSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGCTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWELPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACTGGCAGCACAGGGATaGGGGTACTTTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWELAAQG*GYFSPS
Trigger: GGAGGGAGAAAAGTACCCCCATCCCTGTGCTGCCAG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGGCACATGGAAGCTCTaGCTGTTCCTTCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEGTWKL*LFLPVL
Trigger: CAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGACATGGCCATGGCACATaGAAGCTCTGGCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RSVQGATSGQGLSPLYPGHGHGT*KLWLFL
Trigger: AAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATG...TCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp TTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAAGGCACAGACGAAGTGCTCGCATGGCCATGGCACATaGAAGCTCTGGCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LKVPLLSCLRQKAQTKCSHGHGT*KLWLFL
Trigger: AAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATG...CGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGACATGGGGTGTGCGTaGCCAGACTCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFDMGCA*PDSQLL
Trigger: GAGGAGCTGGGAGTCTGGCCACGCACACCCCATGTC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGGCCCGCTTCCCACGTaGCTGCACAGTGATGATGAC +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSGPLPT*LHSDDD
Trigger: GTCATCATCACTGTGCAGCCACGTGGGAAGCGGGCC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCAAGCCAGGACAGAGATaGTTCTTCTCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPKPGQR*FFSGEW
Trigger: CCATTCCCCTGAGAAGAACCATCTCTGTCCTGGCTT...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TGGGGCCGTTGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTAAGCCAGGACAGAGATaGTTCTTCTCAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: WGRCSSSSAGRRGCGSPFKPGQR*FFSGEW
Trigger: CCATTCCCCTGAGAAGAACCATCTCTGTCCTGGCTT...AAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCAACGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGGGGTCCTCATCAGTCTaGCAGCCCACGGACCTCATG +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLGSSSV*QPTDLM
Trigger: CATGAGGTCCGTGGGCTGCCAGACTGATGAGGACCC...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CATCTGCAGGGAAGCCTGGCGGGTTATGCTGTACAGCGTTCAGTTCCAGCAGCAAGTGAAGTGCCTGTCTaGAACTCTGAATCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: HLQGSLAGYAVQRSVPAASEVPV*NSESRS
Trigger: CGACCTCGATTCAGAGTTCCAGACAGGCACTTCACT...TGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEEAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAAGGCTCTGGCAGGGGTaGAGACAAGCAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRRLWQG*RQAGGP
Trigger: GGGTCCCCCTGCTTGTCTTCACCCCTGCCAGAGCCT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACTGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGCGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVRRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTCTTTCCAGACCCCCTaGGTGCCGATCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFSFQTP*VPIPPV
Trigger: CACAGGTGGGATCGGCACTCAGGGGGTCTGGAAAGA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACC +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRGKACG*KWRHQT
Trigger: GGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTGCTGCCCAGGGACGTaGTCATTACGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDCCPGT*SLRWVK
Trigger: CTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAAAGCCTGGCGGGTTATaGTGTACAGCGTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VRLVVLLLEGALVELLEAKPGGL*CTAFSS
Trigger: GGAACTGAACGCTGTACAGCATAACCCGCCAGGCTT...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR GCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCAGAGGAGGCCGAGATaGGTGTCTGCTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFQRRPR*VSAVGW
Trigger: CCACCCAACAGCAGACACGCATCTCGGCCTCCTCTG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACAGAGGAGGCCGAGATaGGTGTCTGCTGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKQRRPR*VSAVGW
Trigger: CCACCCAACAGCAGACACGCATCTCGGCCTCCTCTG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGCAGGCTCCCCAGCATaGTGTCCAGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSAGSPA*CPAGSR
Trigger: CCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTGCGACAGTAGGCCTTaGCGTCCTTCTCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSCDSRP*RPSRGT
Trigger: GGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTGCGACAGTAGGCCTTaGCGTCCTTCTCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDCDSRP*RPSRGT
Trigger: GGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VRLVVLLLEGALVELLEATKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGAACAACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LGHGGDAAAGDGLLAARTTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...TGTTCTGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTCTGGGAAGATGGCCTaGCGGTCCACTGCCACTACA +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDSGKMA*RSTATT
Trigger: TGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCAGA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCCATCCGCTCTTTaGTCCAGGCCCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPSPSAL*SRPWIC
Trigger: GCAGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGATCTCCTGGTATGTGTaGTTTCCAGTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWISWYV*FPVGYE
Trigger: CTCATACCCAACTGGAAACCACACATACCAGGAGAT...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGGCACGGCAATCTCCTaGTATGTGTGGTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQGTAIS*YVWFPV
Trigger: AACTGGAAACCACACATACCAGGAGATTGCCGTGCC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGGCACGGCAATCTCCTaGTATGTGTGGTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVGTAIS*YVWFPV
Trigger: AACTGGAAACCACACATACCAGGAGATTGCCGTGCC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AGTTCAGAAAGGTTGCTGCCCAGGGACGTGCTCATTACGGTGGGTGAAGGCTCAGGCACGGCAATCTCCTaGTATGTGTGGTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSERLLPRDVLITVGEGSGTAIS*YVWFPV
Trigger: AACTGGAAACCACACATACCAGGAGATTGCCGTGCC...TGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCTGATTTCTGCTTGTTaGGGAAGCTGTAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDLISAC*GSCRRA
Trigger: AGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAG...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCTGATTTCTGCTTGTTaGGGAAGCTGTAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPLISAC*GSCRRA
Trigger: AGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGGGGCTGTTAGTCTCTaGGACACCATAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDGAVSL*DTIEGA
Trigger: AGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAAGAGACTCTCCACACTaGGCCGCACGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSERDSPH*AARPPG
Trigger: GCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGCTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLLLISP*FTVMAG
Trigger: CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAG...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDLLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSLLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGATCCAGTGTGGGGTGCTaGCCAGGCCAGTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRSSVGC*PGQFVG
Trigger: CCCCACGAACTGGCCTGGCCAGCACCCCACACTGGA...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGATGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGCTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACTTGGTAAAGAGCTCTaGGGGGTTTCCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWELGKEL*GVSPEE
Trigger: CTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCAGGAGCCCAAGGCCTaGCTCCTCTTTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDQEPKA*LLFHPW
Trigger: CCAAGGATGAAAGAGGAGCCAGGCCTTGGGCTCCTG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGGGTATAGTGGTGGGTaGCAGAAATACAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYGYSGG*QKYRWH
Trigger: ATGCCATCTGTATTTCTGCCACCCACCACTATACCC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCACTGCCACTACAGCTaGCTCTGTTACTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPHCHYS*LCYFLE
Trigger: TTCCAAGAAGTAACAGAGCCAGCTGTAGTGGCAGTG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCACTGCCACTACAGCTaGCTCTGTTACTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYHCHYS*LCYFLE
Trigger: TTCCAAGAAGTAACAGAGCCAGCTGTAGTGGCAGTG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGGGGTTTCAGGTCCCTaGGTTGGCCTGGCCACACTT +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFGVSGP*VGLATL
Trigger: AAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTGGAAATCCTCTCCGTaGTGCTGGGTGTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDWKSSP*CWVCPW
Trigger: CCATGGGCACACCCAGCACCACGGAGAGGATTTCCA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGGCCCGCTTCCCACGTaGCTGCACAGTGATGATGAC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKGPLPT*LHSDDD
Trigger: GTCATCATCACTGTGCAGCCACGTGGGAAGCGGGCC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTGCACCCCCTCATCATaGGGCTCTTCCCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPCTPSS*GSSPAL
Trigger: GAGTGCAGGGGAAGAGCCCCATGATGAGGGGGTGCA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAGCCCACGGACCTCATaGTGTGGGGTGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKSPRTS*CGVQEW
Trigger: CCATTCCTGCACCCCACACCATGAGGTCCGTGGGCT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
3UTR CAA 72 bp GTTCTCTGCCTTTGGATGGATGGATTTATGCTGGCATaGTCTGGAGGGAGCCGGGTGTCCCCCAATAATCAC +
Preference number: 4 (lower is better)
Translates to: VLCLWMDGFMLA*SGGSRVSPNNH
Trigger: GTGATTATTGGGGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACCAGGCCCTGGATCTTaGAATCCGACAGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKPGPGS*NPTAKP
Trigger: TGGCTTCGCTGTCGGATTTCAAGATCCAGGGCCTGG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS-3UTR TCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSRSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQCTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWESPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGGGAGCAGAGGCTCCTaGGGGCTTACTCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEGSRGS*GLTQTG
Trigger: TCCTGTCTGAGTAAGCCCTCAGGAGCCTCTGCTCCC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATCTTTCCAGACCCCCTaGGTGCCGATCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSESFQTP*VPIPPV
Trigger: CACAGGTGGGATCGGCACTCAGGGGGTCTGGAAAGA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGCTGGTCAGGACTCCTaGGGCTCGGGGTACGGTGTC +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSAGQDS*GSGYGV
Trigger: GACACCGTACCCCGAGCCTCAGGAGTCCTGACCAGC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGAGTTCAGAAAGGTTaGTGCCCAGGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSRVQKG*CPGTCS
Trigger: TGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRRRWAS*RPRRLL
Trigger: AAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTGCGACAGTAGGCCTTaGCGTCCTTCTCGTGGAACC +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPCDSRP*RPSRGT
Trigger: GGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGCCGCCACACTTGGGTaGGAACATGTCGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSAATLG*EHVEVV
Trigger: GACTACTTCGACATGTTCGCACCCAAGTGTGGCGGC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCAGAACTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 4 (lower is better)
Translates to: RLVVLLLEGALVELLEAELGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...TTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCTGGGAAGATGGCCTaGCGGTCCACTGCCACTACA +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPSGKMA*RSTATT
Trigger: TGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCAGA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAAATCCTCTCCGTGGTaGTGGGTGTGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKKSSPW*WVCPWP
Trigger: TGGCCATGGGCACACCCAGCACCACGGAGAGGATTT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTCAGTGATGAGAAACTaGCTTAGCCGGCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSSVMRN*LSRPAE
Trigger: CTCGGCTGGCCGGCTAAGGCAGTTTCTCATCACTGA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGGGGCTGTTAGTCTCTaGGACACCATAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFGAVSL*DTIEGA
Trigger: AGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFLLISP*FTVMAG
Trigger: CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEMRVCC*VEVTRC
Trigger: GCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACGTCCAGCTCCCTGGTaGCAGAGGAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSRPAPW*QRRPRC
Trigger: GCATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFLLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPDPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKDPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTTGCCGTCCTTCTCGTaGAACCCTTCGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSLPSFS*NPSGPK
Trigger: CTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGCGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPRSRHT*VRTCRS
Trigger: ACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCG...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCGCAGCCGCCACACTTaGGTGCGAACATGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFRSRHT*VRTCRS
Trigger: ACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIREMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGCAGGAGCCCAAGGCCTaGCTCCTCTTTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPQEPKA*LLFHPW
Trigger: CCAAGGATGAAAGAGGAGCCAGGCCTTGGGCTCCTG...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGACCTTTGGAGGGGCTaGGCTGACCTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPDLWRG*ADLPPK
Trigger: TTTTGGGGGAAGGTCAGCCCAGCCCCTCCAAAGGTC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGTCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGAGAGTCCAGGTATCTaGGAAGATGGCCTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFESPGI*EDGLPV
Trigger: GACCGGCAGGCCATCTTCCCAGATACCTGGACTCTC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACCTTCCCGTCCTGGGTaGCAGCTTCCGTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSPSRPG*QLPWCP
Trigger: AGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATGCTGGGTGTGCCCATaGCCATGGCACATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKCWVCP*PWHMEA
Trigger: AGCTTCCATGTGCCATGGCCATGGGCACACCCAGCA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTGCTGGGTGTGCCCATaGCCATGGCACATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFCWVCP*PWHMEA
Trigger: AGCTTCCATGTGCCATGGCCATGGGCACACCCAGCA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGGATCTGGCCAGAGGTaGAAATCCTCTCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKGSGQR*KSSPWC
Trigger: GCACCACGGAGAGGATTTCCACCTCTGGCCAGATCC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGCGATGAGCTGTTCCTaGGATGGGGTCCTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFAMSCS*DGVLLK
Trigger: CTTGAGCAGGACCCCATCCCAGGAACAGCTCATCGC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGCGTCTGTGCGATGCTaGAGCAAAGGGACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSASVRC*SKGTEG
Trigger: TCCTTCTGTCCCTTTGCTCCAGCATCGCACAGACGC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACAAGGATTGTGCCATTaGGGGCCTCGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSQGLCH*GPRWTG
Trigger: CCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACCAGGCCCTGGATCTTaGAATCCGACAGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEPGPGS*NPTAKP
Trigger: TGGCTTCGCTGTCGGATTTCAAGATCCAGGGCCTGG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKRSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFRSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACCCAGTGGCGGTGGATaGGGAAGAGAATACAAAAGG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRPSGGG*GREYKR
Trigger: CCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGATCTTTCCAGACCCCCTaGGTGCCGATCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRSFQTP*VPIPPV
Trigger: CACAGGTGGGATCGGCACTCAGGGGGTCTGGAAAGA...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTCCCTCCTGGACAGATaGGCTGATGGAGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDSLLDR*ADGDKK
Trigger: CTTCTTGTCTCCATCAGCTCATCTGTCCAGGAGGGA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR TCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACTGCTCCGTGGTAACTaGGGCAGGGGAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSLLRGN*GRGAAS
Trigger: GGAAGCAGCTCCCCTGCCTCAGTTACCACGGAGCAG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAAAGACAGGCAGCATGTaGCCAGGCAGGCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRKTGSM*PGRLRR
Trigger: CCTCCTGAGCCTGCCTGGTCACATGCTGCCTGTCTT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR GCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEVQKGC*PGTCSL
Trigger: TAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAAC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGAAGAAGTGTTCAGGGTaGCACGTCCGGTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPKKCSG*HVRSRA
Trigger: AGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGATGTCGAAGTAGTCCTTaGGACAGTAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRCRSSP*DSRPCR
Trigger: ACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACA...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFVPLLS*LRQKAQ
Trigger: CTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KKEGPSSETPAHSASARRTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWELGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGACCCTGACTCTCTGTaGCCACTGCCCACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEDPDSL*PLPTEN
Trigger: GTTCTCTGTGGGCAGTGGGCACAGAGAGTCAGGGTC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGGCACGGCAATCTCCTaGTATGTGTGGTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEGTAIS*YVWFPV
Trigger: AACTGGAAACCACACATACCAGGAGATTGCCGTGCC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATGGAAGTTTTGGCACTaGAGCCGTACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEWKFWH*SRTQVM
Trigger: CATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDEGWRH*KFWHWS
Trigger: GCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCATCTGCAGGGAAGCCTaGCGGGTTATGCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFICREA*RVMLYS
Trigger: GCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGAT...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGGGGCTGTTAGTCTCTaGGACACCATAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEGAVSL*DTIEGA
Trigger: AGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACTCCCTGTCTTCCCCTaGGCCATGAACCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSLPVFP*AMNPPS
Trigger: CGAGGGAGGGTTCATGGCCCAGGGGAAGACAGGGAG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228307.11
ENST00000323871.9
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAAGCATGCTGTCCAGCTaGCTCCCGGGCTTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPSMLSS*LPGFGG
Trigger: GCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACTCCTTTGGCGACTGTaGCGACCCCCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSELLWRL*RPPACS
Trigger: TGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRPVMGF*QPEHSE
Trigger: CTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACCAGGCCTAGGGCACTaGAAGGGTAGGAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRPGLGH*KGRRST
Trigger: TGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACAGGAGCCCAAGGCCTaGCTCCTCTTTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEQEPKA*LLFHPW
Trigger: CCAAGGATGAAAGAGGAGCCAGGCCTTGGGCTCCTG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAAGGTATCTGGGAAGATaGCCTGCCGGTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSERYLGR*PAGPLP
Trigger: TGGCAGTGGACCGGCAGGCCATCTTCCCAGATACCT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGAGTCCAGGTATCTaGGAAGATGGCCTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEESPGI*EDGLPV
Trigger: GACCGGCAGGCCATCTTCCCAGATACCTGGACTCTC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGTGTGCCCATGGCCATaGCACATGGAAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEVCPWP*HMEALA
Trigger: AGCCAGAGCTTCCATGTGCCATGGCCATGGGCACAC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCATCCTCTCCGTGGTGCTaGGTGTGCCCATGGCCATGG +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSSSPWC*VCPWPW
Trigger: CCATGGCCATGGGCACACCCAGCACCACGGAGAGGA...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAACGGACCTCATGGTGTaGGGTGCAGGAATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSETDLMV*GAGMGR
Trigger: CCTTCCCATTCCTGCACCCCACACCATGAGGTCCGT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACTTTGCTCCAGGCCCTaGATCGGGCGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPLCSRP*IGRWAW
Trigger: CCAGGCCCAGCGCCCGATCCAGGGCCTGGAGCAAAG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGTTTCCAGTTGGGTATaGGTAGGGGGTCTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEVSSWV*VGGLLR
Trigger: TCGGAGGAGACCCCCTACTCATACCCAACTGGAAAC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGACAGGTGATGAGGACTaGGGCTGCTGGTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPTGDED*GCWWMN
Trigger: ATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGCGCCCTGGTTCACAGTaGTGGCAGGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKERPGSQ*WQGRGW
Trigger: CCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCG...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDQRVEG*DIVLQD
Trigger: ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACGTTCACGAATGGCGTaGAGCATTCCCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSERSRMA*SIPGTQ
Trigger: TTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCCTAGCAGAAGAGCTTaGGGAAGCAGTTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDPSRRA*GSSSDS
Trigger: ACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTTCAACCAGTTTCAGTaGAGAGCTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFFNQFQ*RACWPG
Trigger: CCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGAGACGTCAGAGTCCTaGTGGCCAAAATCAGACACC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKETSES*WPKSDT
Trigger: GGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGATGCCGATCCCACCTGTaGAAGGGGAGGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRCRSHL*KGRSRS
Trigger: AGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCA...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FPDPLSADPTCERGGADLINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGAAGCTAAGCAGGGGTaGAGAAACTGCACATCCACT +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKREAKQG*RNCTST
Trigger: AGTGGATGTGCAGTTTCTTCACCCCTGCTTAGCTTC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACAAGGCTGGATGAAGTaGCAATGCTGGACTCTGATC +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRQGWMK*QCWTLI
Trigger: GATCAGAGTCCAGCATTGTCACTTCATCCAGCCTTG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR GCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRVQKGC*PGTCSL
Trigger: TAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAAC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACGAGTTCAGAAAGGTTaGTGCCCAGGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSERVQKG*CPGTCS
Trigger: TGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAAGCCTGGCGGGTTATaGTGTACAGCGTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKKPGGL*CTAFSS
Trigger: GGAACTGAACGCTGTACAGCATAACCCGCCAGGCTT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCATGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAAAGAAGTGTTCAGGGTaGCACGTCCGGTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEKKCSG*HVRSRA
Trigger: AGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEVPLLS*LRQKAQ
Trigger: CTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDLGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAACTCTCTGTGCCCACTaGCCACAGAGAACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRTLCAH*PQRTLH
Trigger: GTGGAGGGTTCTCTGTGGGCAGTGGGCACAGAGAGT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACTGCTGGGCTGCCACTaGTCTAAGGGGTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSELLGCH*SKGSRI
Trigger: AATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCAG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCAGACACTGGAAGTTTTaGCACTGGAGCCGTACACAG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSRHWKF*HWSRTQ
Trigger: CTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKEGWRH*KFWHWS
Trigger: GCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRTCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAATCTGCAGGGAAGCCTaGCGGGTTATGCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEICREA*RVMLYS
Trigger: GCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGAT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAGCATGCTGTCCAGCTaGCTCCCGGGCTTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKESMLSS*LPGFGG
Trigger: GCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAATCTCCTCCTGGCAGTaGGTGCAGACGAAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRISSWQ*VQTKCS
Trigger: CGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGAT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACCCAGCCTCTACCCCTaGGGAGGATGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPPSLYP*GGWRVG
Trigger: GCCCACTCTCCATCCTCCCCAGGGGTAGAGGCTGGG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCCAGGCCAGTTCGTaGGGACGTACATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPGQASS*GRTWAG
Trigger: CCCAGCCCATGTACGTCCCCACGAACTGGCCTGGCC...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GCAGTACTGAGGACCAGTCGAGGAAGGAGCAGACATGGGTGGACCCACAGAAAATTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 4 (lower is better)
Translates to: AVLRTSRGRSRHGWTHRKLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...TTTTCTGTGGGTCCACCCATGTCTGCTCCTTCCTCGACTGGTCCTCAGTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGCCAGTGGAGTGGTTTaGACTGTCACCATTAGACCC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKASGVV*TVTIRP
Trigger: GGGTCTAATGGTGACAGTCCAAACCACTCCACTGGC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACAGGAGGCCAGTGGAGTaGTTTGGACTGTCACCATTA +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDRRPVE*FGLSPL
Trigger: TAATGGTGACAGTCCAAACCACTCCACTGGCCTCCT...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGATGGCAGAAATACAGATaGCATGGGAGGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRWQKYR*HGRRRR
Trigger: CCTTCTCCTCCTCCCATGCCATCTGTATTTCTGCCA...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGCCAAATCAAGCCAGCTaGGGGCTACAGGAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPPNQAS*GLQEVE
Trigger: TTCTACCTCCTGTAGCCCCCAGCTGGCTTGATTTGG...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGTCCCTGGGTTGGCCTaGCCACACTTCCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPVPGLA*PHFPSR
Trigger: CCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGAC...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGATGGAAATCCTCTCCGTaGTGCTGGGTGTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRWKSSP*CWVCPW
Trigger: CCATGGGCACACCCAGCACCACGGAGAGGATTTCCA...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATTCTTCTCAGGGGAATaGGAGAGCCAGGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKFFSGE*ESQEGR
Trigger: TCTTCCCTCCTGGCTCTCCCATTCCCCTGAGAAGAA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
3UTR CAA 72 bp GGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAGAAGGGGTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GCNTLQPVSVKS*LAWEVKKGFPN
Trigger: ATTTGGAAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGTTTCCAGTTGGGTATaGGTAGGGGGTCTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRVSSWV*VGGLLR
Trigger: TCGGAGGAGACCCCCTACTCATACCCAACTGGAAAC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFQRVEG*DIVLQD
Trigger: ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCCTAGCAGAAGAGCTTaGGGAAGCAGTTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFPSRRA*GSSSDS
Trigger: ACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACCTAGCAGAAGAGCTTaGGGAAGCAGTTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKPSRRA*GSSSDS
Trigger: ACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGCCTGCAGCTCCGCGATaGGCTGTTCCTGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEPAAPR*AVPGMG
Trigger: CCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGG...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACGGCGATGGGCTTCTTaGAGGCCCCGCAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPRRWAS*RPRRLL
Trigger: AAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGTGCCCTTGTTGAGCTaGTTGAGGCAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRVPLLS*LRQKAQ
Trigger: CTGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCAC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HSASARRPVEWFGLSPLDTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAAGGAGCCTGTCCCTCTaGCCCAAATCCTATCATGCT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSERSLSL*PKSYHA
Trigger: AGCATGATAGGATTTGGGGCAGAGGGACAGGCTCCT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAAGGCCTCGTCCACTCTaGTCAGTACAAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRRPRPL*SVQGNS
Trigger: GGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCCT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR GCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGATGCCCAGCCGCCCCTaGAGCTCCGCGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEMPSRP*SSAMSC
Trigger: ACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCAT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAATCTCCTGGTATGTGTaGTTTCCAGTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEISWYV*FPVGYE
Trigger: CTCATACCCAACTGGAAACCACACATACCAGGAGAT...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTGGAAGTTTTGGCACTaGAGCCGTACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPWKFWH*SRTQVM
Trigger: CATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACTGATTTCTGCTTGTTaGGGAAGCTGTAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRLISAC*GSCRRA
Trigger: AGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGACGTGCTCATTACGGTaGGTGAAGGCTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPTCSLR*VKAQLI
Trigger: AATCAGCTGAGCCTTCACCCACCGTAATGAGCACGT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGCCACGTCTTCCCCATaGCGGTCACAACCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEATSSP*RSQPAR
Trigger: CCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGATCCGATCTCCTCCTaGCAGTGGGTGCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSDPISS*QWVQTK
Trigger: CTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATACCCCTGGGGAGGATaGAGAGTGGGCAGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPYPWGG*RVGSLG
Trigger: CCCTAGGCTGCCCACTCTCCATCCTCCCCAGGGGTA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGAATATGAGGAAGAGATaGCTCCAGTGTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPNMRKR*LQCGVL
Trigger: CAGCACCCCACACTGGAGCCATCTCTTCCTCATATT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACTTGGTAAAGAGCTCTaGGGGGTTTCCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRLGKEL*GVSPEE
Trigger: CTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAACCATTAGACCCCGGTaGGGCCCCTTTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSTIRPR*GPFLLI
Trigger: GATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGT...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAAACCCCAGTCCCTCTTaGGGAAGATCTAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRNPSPS*GRSRVG
Trigger: ACCCACCCTAGATCTTCCCCAAGAGGGACTGGGGTT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAATCACAGATCGGATCTaGCCAGAGGTGGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKITDRI*PEVEIL
Trigger: GAGGATTTCCACCTCTGGCCAGATCCGATCTGTGAT...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCATCACAGATCGGATCTaGCCAGAGGTGGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFITDRI*PEVEIL
Trigger: GAGGATTTCCACCTCTGGCCAGATCCGATCTGTGAT...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAGGGCTCCCGGGACATaGGGTGTGCGTGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKERAPGT*GVRGQT
Trigger: AGTCTGGCCACGCACACCCCATGTCCCGGGAGCCCT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACTCCCTGTCTTCCCCTaGGCCATGAACTTGAAATCC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSELPVFP*AMNLKS
Trigger: GGATTTCAAGTTCATGGCCCAGGGGAAGACAGGGAG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424649.6
ENST00000458477.6
CDS-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGAGGCTGCTGGTGGATaGATCGGGAGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEEAAGG*IGSCWA
Trigger: AGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACAGCGTGTTGAGGGCTaGGATATAGTTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEQRVEG*DIVLQD
Trigger: ATCCTGGAGAACTATATCTCAGCCCTCAACACGCTG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAAGTCCTGGTGAGCTATaGAGTGAAAGAGGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRSPGEL*SERGGV
Trigger: GACTCCCCCTCTTTCACTTCATAGCTCACCAGGACT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATCTTTCCAGACCCCCTaGGTGCCGATCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPSFQTP*VPIPPV
Trigger: CACAGGTGGGATCGGCACTCAGGGGGTCTGGAAAGA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATATCATGCTCCCTTATaGCCTTCTTTCCAGACCCCC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEYHAPL*PSFQTP
Trigger: GGGGGTCTGGAAAGAAGGTCATAAGGGAGCATGATA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACCTGGACAGATGAGCTaGTGGAGACAAGAAGTACAA +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKPGQMS*WRQEVQ
Trigger: TTGTACTTCTTGTCTCCATCAGCTCATCTGTCCAGG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAAAGCCTGGCGGGTTATaGTGTACAGCGTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRKPGGL*CTAFSS
Trigger: GGAACTGAACGCTGTACAGCATAACCCGCCAGGCTT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCATTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAATGGCGGTCACAACCTaGCCGGCGATGGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPMAVTT*PAMGFL
Trigger: CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCAT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATGGGTGCAGACGAAGTaGTCGGGGTGCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPWVQTK*SGCHVF
Trigger: GAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRTKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp GCAGTACTGAGGACCAGTCGAGGAAGGAGCAGACATGGGTGGACCCACAGAAAAACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AVLRTSRGRSRHGWTHRKTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...TTTTCTGTGGGTCCACCCATGTCTGCTCCTTCCTCGACTGGTCCTCAGTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637624.1
CDS-3UTR GCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSELGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACATCTCCTGGTATGTGTaGTTTCCAGTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDISWYV*FPVGYE
Trigger: CTCATACCCAACTGGAAACCACACATACCAGGAGAT...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCATCTCCTGGTATGTGTaGTTTCCAGTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSISWYV*FPVGYE
Trigger: CTCATACCCAACTGGAAACCACACATACCAGGAGAT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACTGCTGGGCTGCCACTaGTCTAAGGGGTCAAGGATT +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSLLGCH*SKGSRI
Trigger: AATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCAG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIREGWRH*KFWHWS
Trigger: GCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAATGCGTGTCTGCTGTTaGGTGGAGGTGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPMRVCC*VEVTRC
Trigger: GCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACCACTTTATCCAGGATaGGGCCGTTGCAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRPLYPG*GRCSSS
Trigger: GCTACTACTGCAACGGCCCCATCCTGGATAAAGTGG...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGAGATGGCTCCAGTGTaGGGTGCTGGCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEEMAPV*GAGQAS
Trigger: ACTGGCCTGGCCAGCACCCCACACTGGAGCCATCTC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATGGATGGATTTATGCTaGCATTGTCTGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEWMDLC*HCLEGA
Trigger: GGCTCCCTCCAGACAATGCCAGCATAAATCCATCCA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGAGACATCAGACCTTTaGAGGGGCTGGGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSETSDL*RGWADL
Trigger: AAGGTCAGCCCAGCCCCTCCAAAGGTCTGATGTCTC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGTAAGGCCTGCGGGTaGAAGTGGAGACATCAGACC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPGKACG*KWRHQT
Trigger: GGTCTGATGTCTCCACTTTCACCCGCAGGCCTTACC...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCTTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAACTCCCAGCTCCTCCTaGTCACAGATCGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPTPSSS*SQIGSG
Trigger: GCCAGATCCGATCTGTGATCAGGAGGAGCTGGGAGT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGGGAGTCACAGAGCTaGTCCCAGTTCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPGESQS*SQFTCL
Trigger: CAAGCAGGTGAACTGGGAGCAGCTCTGTGACTCCCC...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGAGGGTTGGAGACACTaGAAGTTTTGGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSEGWRH*KFWHWS
Trigger: GCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGGGCTGTTAGTCTCTaGGACACCATAGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPGAVSL*DTIEGA
Trigger: AGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCC...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACTGCTCATCTCGCCCTaGTTCACAGTGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPLLISP*FTVMAG
Trigger: CCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGCCGGTGATGGGCTTCTaGCAGCCAGAACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEPVMGF*QPEHSE
Trigger: CTCGCTGTGTTCTGGCTGCCAGAAGCCCATCACCGG...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGGTCACAGTCGCAGTTaGGGATGCTGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEGHSRS*GCWLGK
Trigger: CTTCCCCAGCCAGCATCCCCAACTGCGACTGTGACC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACTGCCTTTGGATGGATaGATTTATGCTGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKLPLDG*IYAGIV
Trigger: GACAATGCCAGCATAAATCCATCCATCCAAAGGCAG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 4 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACTGCCAGGAGGCCAGTaGAGTGGTTTGGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPLPGGQ*SGLDCH
Trigger: GTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGATCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSERRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACTGGTGAAGTATTGGTaGGAGGATGCAGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPLVKYW*EDAVLG
Trigger: CCCCAGGACTGCATCCTCTCACCAATACTTCACCAG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR GCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTTCAGAAAGGTTGCTaGCCAGGGACGTGCTCATTA +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSVQKGC*PGTCSL
Trigger: TAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAAC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATTGTTCAGGTCAGACTaGAGGCTCCCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPLFRSD*RLPSML
Trigger: CAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAAAGAAGTGTTCAGGGTaGCACGTCCGGTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPKKCSG*HVRSRA
Trigger: AGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGATCTCCTCCTGGCAGTaGGTGCAGACGAAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEISSWQ*VQTKCS
Trigger: CGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGAT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGCTGCCGTTCACGAATaGCGTGAAGCATTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEAAVHE*REAFPA
Trigger: TGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATCACAGGAATTGAAATaGGAAAAGCCAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKSQELK*EKPAWK
Trigger: CTTCCAAGCTGGCTTTTCCCATTTCAATTCCTGTGA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAACTAAGCCTGGGCTTTTaGTTTATGGATTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKLSLGF*FMDWIQ
Trigger: CTGAATCCAATCCATAAACCAAAAGCCCAGGCTTAG...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGTTTCCAGTTGGGTATaGGTAGGGGGTCTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEVSSWV*VGGLLR
Trigger: TCGGAGGAGACCCCCTACTCATACCCAACTGGAAAC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAACAGGTGATGAGGACTaGGGCTGCTGGTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPTGDED*GCWWMN
Trigger: ATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAAGGAGGGAGAGCGATaGGGAAGAAATCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEKEGER*GRNRQL
Trigger: GAGCTGGCGATTTCTTCCTCATCGCTCTCCCTCCTT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAAAGCCTGGCGGGTTATaGTGTACAGCGTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPKPGGL*CTAFSS
Trigger: GGAACTGAACGCTGTACAGCATAACCCGCCAGGCTT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATGTCGAAGTAGTCCTTaGGACAGTAGGCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPCRSSP*DSRPCR
Trigger: ACGGCAAGGCCTACTGTCGCAAGGACTACTTCGACA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPTKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTTGCCGTCCTTCTCGTaGAACCCTTCGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKELPSFS*NPSGPK
Trigger: CTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAAAGAGCTTGCTGGCCTaGGAAGTAAAGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSKSLLA*EVKKGF
Trigger: AAACCCCTTCTTTACTTCCCAGGCCAGCAAGCTCTT...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGCTTGGTAAAGAGCTCTaGGGGGTTTCCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKELGKEL*GVSPEE
Trigger: CTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAG...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAATGTCAACAGGCTCTTaGGAGCACAGATCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPMSTGS*EHRSLG
Trigger: GCCTAGGGATCTGTGCTCCCAAGAGCCTGTTGACAT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGACAGGTGATGAGGACTaGGGCTGCTGGTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKETGDED*GCWWMN
Trigger: ATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR TCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSRRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGATTTTCAAATAACCACTaGCTCAGAGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRFSNNH*LREWTP
Trigger: TGGGGTCCATTCTCTGAGTCAGTGGTTATTTGAAAA...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGAAGCCTGGCGGGTTATaGTGTACAGCGTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEKPGGL*CTAFSS
Trigger: GGAACTGAACGCTGTACAGCATAACCCGCCAGGCTT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR GCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGACAAAGCACTCAGGATaGCACAGCGTGTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKETKHSG*HSVLRA
Trigger: AGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGACTAGAAAACATTATTaGTGGAGAGGCTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPTRKHY*WRGFSQ
Trigger: CTGAGAAAAGCCTCTCCAGCAATAATGTTTTCTAGT...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACTAGGCCCAAAAGGGTaGAACACCCTTCAACCAGTT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPLGPKG*NTLQPV
Trigger: AACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGACTCTGCACCAAGAGTaGGGCCAGTCTTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKETLHQE*GQSSKV
Trigger: GACTTTGGAAGACTGGCCCCACTCTTGGTGCAGAGT...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGATGCCACAGCGTGTTaGGGGCTGAGATATAGTTCT +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEDATAC*GLRYSS
Trigger: AGAACTATATCTCAGCCCTCAACACGCTGTGGCATC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACCTGGACAGATGAGCTaGTGGAGACAAGAAGTACAA +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPPGQMS*WRQEVQ
Trigger: TTGTACTTCTTGTCTCCATCAGCTCATCTGTCCAGG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267257.11
ENST00000637624.1
CDS-3UTR GCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGATGGATGGATTTATaGTGGCATTGTCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPGWMDL*WHCLEG
Trigger: TCCCTCCAGACAATGCCAGCATAAATCCATCCATCC...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCATTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGGGGAAGATCTAGGGTaGGTCACTATAAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEGEDLG*VTINRA
Trigger: CGCTCTGTTTATAGTGACCCACCCTAGATCTTCCCC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTGCACTGCTGAAATATaGGGAAGAGATGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKECTAEI*GRDGSS
Trigger: ACTGGAGCCATCTCTTCCTCATATTTCAGCAGTGCA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACGGAGACGGAGGAAGTaGCTAGAAAACATTATTGCT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPRRRRK*LENIIA
Trigger: AGCAATAATGTTTTCTAGTCACTTCCTCCGTCTCCG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR TCA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAATAAATCACAGGAATTaGAATGGGAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSINHRN*NGKSQL
Trigger: AAGCTGGCTTTTCCCATTTCAATTCCTGTGATTTAT...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATTCTCTGCCTTTGGATaGATGGATTTATGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPFSAFG*MDLCWH
Trigger: ATGCCAGCATAAATCCATCCATCCAAAGGCAGAGAA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CCA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATTGGTTCTCTGCCTTTaGATGGATGGATTTATGCTG +
Preference number: 4 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPLVLCL*MDGFML
Trigger: CAGCATAAATCCATCCATCCAAAGGCAGAGAACCAA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS GCA 90 bp CGGCTCAGGGTCGCGCTAGCTGCCCGTCCCGGGGCCGCTCGTCTATaGCCCGCAACTTTTCCGCCGCGAGCCTCGGCCCGGAACGGAACG +
Preference number: 5 (lower is better)
Translates to: RLRVALAARPGAARL*PATFPPRASARNGT
Trigger: CGTTCCGTTCCGGGCCGAGGCTCGCGGCGGAAAAGTTGCGGGGCATAGACGAGCGGCCCCGGGACGGGCAGCTAGCGCGACCCTGAGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000424649.6
ENST00000547772.1
ENST00000547983.5
CDS CCA 90 bp CCACGTGGCTGCACAGTGATGATGACGCCCTCGGTCAGCCAGTCCTaGGCAGAGGGCCCCGCCGCCTCCGCCGGCTCCTCTGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PRGCTVMMTPSVSQS*AEGPAASAGSSASG
Trigger: GCCTGAGGCAGAGGAGCCGGCGGAGGCGGCGGGGCCCTCTGCCCAGGACTGGCTGACCGAGGGCGTCATCATCACTGTGCAGCCACGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 90 bp GATGCCCAGCCGCCCCTGCAGCTCCGCGATGAGCTGTTCCTGGGATaGGGTCCTGCTCAAGGTGGCAGGGTCCAGCCGGCGGCGAGGGGA +
Preference number: 5 (lower is better)
Translates to: DAQPPLQLRDELFLG*GPAQGGRVQPAARG
Trigger: TCCCCTCGCCGCCGGCTGGACCCTGCCACCTTGAGCAGGACCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 90 bp GGCTGGATGCCCAGCCGCCCCTGCAGCTCCGCGATGAGCTGTTCCTaGGATGGGGTCCTGCTCAAGGTGGCAGGGTCCAGCCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: GWMPSRPCSSAMSCS*DGVLLKVAGSSRRR
Trigger: TCGCCGCCGGCTGGACCCTGCCACCTTGAGCAGGACCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 90 bp GCCTCCGCCGGCTCCTCTGCCTCAGGCTGGATGCCCAGCCGCCCCTaGAGCTCCGCGATGAGCTGTTCCTGGGATGGGGTCCTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: ASAGSSASGWMPSRP*SSAMSCSWDGVLLK
Trigger: CTTGAGCAGGACCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATCCAGCCTGAGGCAGAGGAGCCGGCGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 90 bp AGGGTCCAGCCGGCGGCGAGGGGAGGGCTCCCGGGACATGGGGTGTaGGTGGCCAGACTCCCAGCTCCTCCTGATCACAGATCGGATCTG +
Preference number: 5 (lower is better)
Translates to: RVQPAARGGLPGHGV*VARLPAPPDHRSDL
Trigger: CAGATCCGATCTGTGATCAGGAGGAGCTGGGAGTCTGGCCACGCACACCCCATGTCCCGGGAGCCCTCCCCTCGCCGCCGGCTGGACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 90 bp TCCAGCCGGCGGCGAGGGGAGGGCTCCCGGGACATGGGGTGTGCGTaGCCAGACTCCCAGCTCCTCCTGATCACAGATCGGATCTGGCCA +
Preference number: 5 (lower is better)
Translates to: SSRRRGEGSRDMGCA*PDSQLLLITDRIWP
Trigger: TGGCCAGATCCGATCTGTGATCAGGAGGAGCTGGGAGTCTGGCCACGCACACCCCATGTCCCGGGAGCCCTCCCCTCGCCGCCGGCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS TCA 90 bp CCTCTGCCTCAGGCTGGATGCCCAGCCGCCCCTGCAGCTCCGCGATaGGCTGTTCCTGGGATGGGGTCCTGCTCAAGGTGGCAGGGTCCA +
Preference number: 5 (lower is better)
Translates to: PLPQAGCPAAPAAPR*AVPGMGSCSRWQGP
Trigger: TGGACCCTGCCACCTTGAGCAGGACCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATCCAGCCTGAGGCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 90 bp CCCAGCCCCAGCCATGGGCATCTCCTCGCCACCTTCTCTACGAGCTaGCCCCCGGCCCGCTTCCCACGTGGCTGCACAGTGATGATGACG +
Preference number: 5 (lower is better)
Translates to: PSPSHGHLLATFSTS*PPARFPRGCTVMMT
Trigger: CGTCATCATCACTGTGCAGCCACGTGGGAAGCGGGCCGGGGGGCAGCTCGTAGAGAAGGTGGCGAGGAGATGCCCATGGCTGGGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS GCA 90 bp GGCACTGCGTTCCCTCCTGACAGGGCCGCGCAGCCGCGAGTGAAGTaGCTGTCTGGAACTCTGAATCGAGGTCGTCCATGGCCGGACCAC +
Preference number: 5 (lower is better)
Translates to: GTAFPPDRAAQPRVK*LSGTLNRGRPWPDH
Trigger: GTGGTCCGGCCATGGACGACCTCGATTCAGAGTTCCAGACAGGCACTTCACTCGCGGCTGCGCGGCCCTGTCAGGAGGGAACGCAGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS CCA 90 bp TGGCTGTTCCTTCCCGTCCTGGGTGGCAGCTTCCGTGGTGCCCTCTaGGCTCCTTGGGGTTTCAGGTCCCTGGGTTGGCCTGGCCACACT +
Preference number: 5 (lower is better)
Translates to: WLFLPVLGGSFRGAL*APWGFRSLGWPGHT
Trigger: AGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 90 bp CTCCGTGGTGCTGGGTGTGCCCATGGCCATGGCACATGGAAGCTCTaGCTGTTCCTTCCCGTCCTGGGTGGCAGCTTCCGTGGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LRGAGCAHGHGTWKL*LFLPVLGGSFRGAL
Trigger: GAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCACCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS CCA 90 bp ATGGAAGCTCTGGCTGTTCCTTCCCGTCCTGGGTGGCAGCTTCCGTaGTGCCCTCTGGGCTCCTTGGGGTTTCAGGTCCCTGGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: MEALAVPSRPGWQLP*CPLGSLGFQVPGLA
Trigger: GGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 90 bp GATGGACAGAGGGGATGTCTGTTCCAAGGCCCAGGACCCCGGGTCTaGTCGCCTGACCTCCAAGGAAGTTCAGGTCCTACAGCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: DGQRGCLFQGPGPRV*SPDLQGSSGPTARP
Trigger: GGGGCGGGCTGTAGGACCTGAACTTCCTTGGAGGTCAGGCGACCAGACCCGGGGTCCTGGGCCTTGGAACAGACATCCCCTCTGTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546532.5
ENST00000548912.5
CDS-3UTR CAA 90 bp CCGGCCCCCATTCCGCTTAGGCTTCTCTTTCGTCAGGGGCCCAGCTTTGCCTCCGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: PAPIPLRLLFRQGPSFASVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...GGAGGCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CAA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 5 (lower is better)
Translates to: FPDPLSADPTCERGGADLAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CTGGGCAGGGGAGAAGAGCTGCTGGCCGCGGCGTCTGTGCGATGCTGGAGCAAATCGGGGTGGAACTTCTaGGCCATGGCGGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: LGRGEELLAAASVRCWSKSGWNF*AMAVMQ
Trigger: CTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGA...TTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCCCCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CAA 90 bp GGGCTTCTTGCAGGCCCCGCAGACTCCTTTGGCGACTGTGGCGACCCCCAGCTTAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: GLLAGPADSFGDCGDPQLRSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...AAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CAA 90 bp GGGTGCCACGTCTTCCCCATGGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCCCTCTCGGTCATCTTaGCACCTAGCTGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: GCHVFPMAVTTCPAMGFLPSRSS*HLAAPW
Trigger: CCACGGAGCAGCTAGGTGCAAAGATGACCGAGAGGG...CAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CAA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTGCCCTCTGGGCTCCTaGGGGTTTCAGGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGCPLGS*GFQVPG
Trigger: CCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 90 bp TCAAGCCAGCTGGGGGCTACAGGAGGTAGAAGGCCTCGTCCACTCTaGTCAGTACAAGGGAACTCCGGAGTGTGGCCCTGGCCTCGAGGG +
Preference number: 5 (lower is better)
Translates to: SSQLGATGGRRPRPL*SVQGNSGVWPWPRG
Trigger: CCCTCGAGGCCAGGGCCACACTCCGGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCCTTCTACCTCCTGTAGCCCCCAGCTGGCTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 90 bp GGCACTGCGTTCCCTCCTGACAGGGCCGCGCAGCCGCGAGTGAAGTaGCTGTCTGGAACTCTGAATCCCATGCTCCTGCCCAGATGGACA +
Preference number: 5 (lower is better)
Translates to: GTAFPPDRAAQPRVK*LSGTLNPMLLPRWT
Trigger: TGTCCATCTGGGCAGGAGCATGGGATTCAGAGTTCCAGACAGGCACTTCACTCGCGGCTGCGCGGCCCTGTCAGGAGGGAACGCAGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546532.5
CDS CCA 90 bp TGGTGCCCTCTGGGCTCCTTGGGGTTTCAGGTCCCTGGGTTGGCCTaGCCACACTTCCCCTCTCGGTCATCTTTGCACCTAGCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: WCPLGSLGFQVPGLA*PHFPSRSSLHLAAP
Trigger: CGGAGCAGCTAGGTGCAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 90 bp TGGCCATGGCACATGGAAGCTCTGGCTGTTCCTTCCCGTCCTGGGTaGCAGCTTCCGTGGTGCCCTCTGGGCTCCTTGGGGTTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: WPWHMEALAVPSRPG*QLPWCPLGSLGFQV
Trigger: GACCTGAAACCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTG +
Preference number: 5 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSDACLL*GGGDAL
Trigger: CAGCGCGTCACCTCCACCCAACAGCAGACACGCATC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp CCTCACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTG +
Preference number: 5 (lower is better)
Translates to: PHGPLSIPHQRRTRVPVSDACLL*GGGDAL
Trigger: CAGCGCGTCACCTCCACCCAACAGCAGACACGCATC...TGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTG +
Preference number: 5 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTDACLL*GGGDAL
Trigger: CAGCGCGTCACCTCCACCCAACAGCAGACACGCATC...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTG +
Preference number: 5 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGDACLL*GGGDAL
Trigger: CAGCGCGTCACCTCCACCCAACAGCAGACACGCATC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AACTTCTTGGCCATGGCGGTGATGCAGCGGCCGGTGATGGGCTTCTGGCAGCCAGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: NFLAMAVMQRPVMGFWQPVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...TGGCTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CAA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 5 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 5 (lower is better)
Translates to: HSASARRPVEWFGLSPLDAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGCCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: FPDPLSADPTCERGGADLPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGCCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS TCA 90 bp CACAGGGTACAGTGTGGCAGCGGGGAGCCCCAGAGAGCTCACTTGTaGTGGTCGGCAGGTGCCTCCAATCTCGACCCTGACTCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: HRVQCGSGEPQRAHL*WSAGASNLDPDSLC
Trigger: GCACAGAGAGTCAGGGTCGAGATTGGAGGCACCTGCCGACCATCACAAGTGAGCTCTCTGGGGCTCCCCGCTGCCACACTGTACCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS TCA 90 bp GACCAGGCAGGCTCAGGAGGGCTGCCAAGTCGTGTCTCTGAGGAGTaGCTGCAGTGTTCCAGGCATCACGACCACTCCTCCACACCCACC +
Preference number: 5 (lower is better)
Translates to: DQAGSGGLPSRVSEE*LQCSRHHDHSSTPT
Trigger: GGTGGGTGTGGAGGAGTGGTCGTGATGCCTGGAACACTGCAGTCACTCCTCAGAGACACGACTTGGCAGCCCTCCTGAGCCTGCCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS GCA 90 bp GTTGGCCTGGCCACACTTCCCCTCTCGGTCATCTTTGCACCTAGCTaGTCCGTGGTAACTGAGGCAGGGGAGCTGCTTCCCAGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: VGLATLPLSVIFAPS*SVVTEAGELLPSLP
Trigger: AGGGAGGCTGGGAAGCAGCTCCCCTGCCTCAGTTACCACGGAGCAGCTAGGTGCAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 90 bp AGGCAGGCTCAGGAGGGCTGCCAAGTCGTGTCTCTGAGGAGTGACTaGAGTGTTCCAGGCATCACGACCACTCCTCCACACCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: RQAQEGCQVVSLRSD*SVPGITTTPPHPPQ
Trigger: CTGGGGTGGGTGTGGAGGAGTGGTCGTGATGCCTGGAACACTGCAGTCACTCCTCAGAGACACGACTTGGCAGCCCTCCTGAGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS CCA 90 bp GGAAATCCTCTCCGTGGTGCTGGGTGTGCCCATGGCCATGGCACATaGAAGCTCTGGCTGTTCCTTCCCGTCCTGGGTGGCAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: GNPLRGAGCAHGHGT*KLWLFLPVLGGSFR
Trigger: ACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAGAGGATTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 90 bp CAGAGGTGGAAATCCTCTCCGTGGTGCTGGGTGTGCCCATGGCCATaGCACATGGAAGCTCTGGCTGTTCCTTCCCGTCCTGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: QRWKSSPWCWVCPWP*HMEALAVPSRPGWQ
Trigger: CTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAGAGGATTTCCACCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: KKEGPSSETPAHSASARRVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 5 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGCGCAGCCGCCACACTaGGGTGCGAACATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: KKEGPSSETPAHSASARRAQPPH*GANMSK
Trigger: CTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS CCA 90 bp AACCCCAGTAGGGGGCAGGAGCAGCTGCCATCCTTGAAGGCCCACTaGGGCCAGGAGCTTCACCTTTGTTACCTGCCATCCTCACAACGC +
Preference number: 5 (lower is better)
Translates to: NPSRGQEQLPSLKAH*GQELHLCYLPSSQR
Trigger: GCGTTGTGAGGATGGCAGGTAACAAAGGTGAAGCTCCTGGCCCCAGTGGGCCTTCAAGGATGGCAGCTGCTCCTGCCCCCTACTGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS-3UTR CAA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTCAAGGATTGTGCCATaGAGGGCCTCGCTGGACGGG +
Preference number: 5 (lower is better)
Translates to: KKEGPSSETPAHSASARRSRIVP*RASLDG
Trigger: CCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp GAGCTCTCCAGTTCATCCAAGAGACTCTCCACACTGGGCCGCACGTCCTCCAGGTCAAGGATTGTGCCATaGAGGGCCTCGCTGGACGGG +
Preference number: 5 (lower is better)
Translates to: ELSSSSKRLSTLGRTSSRSRIVP*RASLDG
Trigger: CCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGA...CCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CAA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTG +
Preference number: 5 (lower is better)
Translates to: FPDPLSADPTCERGGADLDACLL*GGGDAL
Trigger: CAGCGCGTCACCTCCACCCAACAGCAGACACGCATC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp GTTCAGTTCCAGCAGCAGGCGGTCGAGTTCAGAAAGGTTGCTGCCCAGGGACGTGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTG +
Preference number: 5 (lower is better)
Translates to: VQFQQQAVEFRKVAAQGRDACLL*GGGDAL
Trigger: CAGCGCGTCACCTCCACCCAACAGCAGACACGCATC...ACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CAA 90 bp TGCAGTAGTAGCAGCGCGGGGAGAAGAGGTTGTGGTAGTCCTTTTCACAGTAGGGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 5 (lower is better)
Translates to: CSSSSAGRRGCGSPFHSRAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...CCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CAA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGGCGCAGCCGCCACACTaGGGTGCGAACATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: FPDPLSADPTCERGGADLAQPPH*GANMSK
Trigger: CTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGC...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS TCA 90 bp GAGAGCTCACTTGTGATGGTCGGCAGGTGCCTCCAATCTCGACCCTaGCTCTCTGTGCCCACTGCCCACAGAGAACCCTCCACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: ESSLVMVGRCLQSRP*LSVPTAHREPSTEG
Trigger: TCCCTCTGTGGAGGGTTCTCTGTGGGCAGTGGGCACAGAGAGTCAGGGTCGAGATTGGAGGCACCTGCCGACCATCACAAGTGAGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 90 bp ATCGGATCTGGCCAGAGGTGGAAATCCTCTCCGTGGTGCTGGGTGTaGCCATGGCCATGGCACATGGAAGCTCTGGCTGTTCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: IGSGQRWKSSPWCWV*PWPWHMEALAVPSR
Trigger: ACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAGAGGATTTCCACCTCTGGCCAGATCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 90 bp AGAAGGCCTCGTCCACTCTGCTCAGTACAAGGGAACTCCGGAGTGTaGCCCTGGCCTCGAGGGGAGGGTATAGTGGTGGGTGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: RRPRPLCSVQGNSGV*PWPRGEGIVVGGRN
Trigger: ATTTCTGCCACCCACCACTATACCCTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 90 bp CCTCTGGGCCCAATCAGCAATGGGTGGATCCCTCTTTCTCCACCATaGGCAGGGCCAGCTAAGAAACCCCATAGGACTCCCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLGPISNGWIPLSPP*AGPAKKPHRTPQSR
Trigger: CCTGCTCTGGGGAGTCCTATGGGGTTTCTTAGCTGGCCCTGCCCATGGTGGAGAAAGAGGGATCCACCCATTGCTGATTGGGCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS CCA 90 bp CCGCCAGCAGGGCGTCTGCCATCCTCACAACGCCACCAGCACAGATaGTATAACTGCGGTTCAGAGGCAGAGTCACATCCCACACTGCCA +
Preference number: 5 (lower is better)
Translates to: PPAGRLPSSQRHQHR*YNCGSEAESHPTLP
Trigger: TGGCAGTGTGGGATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGACGCCCTGCTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR CAA 90 bp GGCGGTCACAACCTGCCCGGCGATGGGCTTCTTGCAGGCCCCGCAGACTCCTTTATGTGTGGTTTCCAGTaGGGTATGAGTAGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GGHNLPGDGLLAGPADSFMCGFQ*GMSRGS
Trigger: AGACCCCCTACTCATACCCAACTGGAAACCACACAT...AAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CAA 90 bp TGGGTGGAGGTGACGCGCTGCGGGCTGCTCATCTCGCCCTGGTTCACAGTGATGGAGACACTGGAAGTTTaGGCACTGGAGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: WVEVTRCGLLISPWFTVMETLEV*ALEPYT
Trigger: TGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTC...CATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS-3UTR CAA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: HSASARRPVEWFGLSPLDVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGCGCAGCCGCCACACTaGGGTGCGAACATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYAQPPH*GANMSK
Trigger: CTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CCCAGCACACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCTCCTTGAAGGTGCCCTaGTTGAGCTGCTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PSTLGFCQEASGVVWTVTSLKVP*LSCLRQ
Trigger: CTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGA...GGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTCCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 5 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACAGGGGCCAGGAGCCCTaGAAATCCGACAGCGAAGCC +
Preference number: 5 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYRGQEP*KSDSEA
Trigger: GGCTTCGCTGTCGGATTTCAAGGGCTCCTGGCCCCT...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267257.11
CDS-3UTR CAA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGTGGAGGAGCTGGTCTaGAAATCCGACAGCGAAGCC +
Preference number: 5 (lower is better)
Translates to: KKEGPSSETPAHSASARRVEELV*KSDSEA
Trigger: GGCTTCGCTGTCGGATTTCAAGACCAGCTCCTCCAC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CAA 90 bp AAGCTGCCGTTCACGAATGGCGTGAAGCATTCCCGGCACACAAAGCACTCAGGATGCCCTCTGGGCTCCTaGGGGTTTCAGGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: KLPFTNGVKHSRHTKHSGCPLGS*GFQVPG
Trigger: CCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCA...TCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS GCA 90 bp ACCTTCCAAGACAGGCAGCATGTGACCAGGCAGGCTCAGGAGGGCTaGCAAGTCGTGTCTCTGAGGAGTGACTGCAGTGTTCCAGGCATC +
Preference number: 5 (lower is better)
Translates to: TFQDRQHVTRQAQEG*QVVSLRSDCSVPGI
Trigger: GATGCCTGGAACACTGCAGTCACTCCTCAGAGACACGACTTGGCAGCCCTCCTGAGCCTGCCTGGTCACATGCTGCCTGTCTTGGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS GCA 90 bp GGAGATGTGGGAGGTGGTAGACTCCAAGTCCGCCAGCAGGGCGTCTaGCATCCTCACAACGCCACCAGCACAGATGGTATAACTGCGGTT +
Preference number: 5 (lower is better)
Translates to: GDVGGGRLQVRQQGV*HPHNATSTDGITAV
Trigger: AACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS CCA 90 bp CCTCGTCCACTCTGCTCAGTACAAGGGAACTCCGGAGTGTGGCCCTaGCCTCGAGGGGAGGGTATAGTGGTGGGTGGCAGAAATACAGAT +
Preference number: 5 (lower is better)
Translates to: PRPLCSVQGNSGVWP*PRGEGIVVGGRNTD
Trigger: ATCTGTATTTCTGCCACCCACCACTATACCCTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCCTTGTACTGAGCAGAGTGGACGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 90 bp TCACAGATCGGATCTGGCCAGAGGTGGAAATCCTCTCCGTGGTGCTaGGTGTGCCCATGGCCATGGCACATGGAAGCTCTGGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: SQIGSGQRWKSSPWC*VCPWPWHMEALAVP
Trigger: AGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAGAGGATTTCCACCTCTGGCCAGATCCGATCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGAGACACTGGAAGTTTaGGCACTGGAGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSETLEV*ALEPYT
Trigger: TGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 5 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTCGGGGTGGAACTTCTaGGCCATGGCGGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPSGWNF*AMAVMQ
Trigger: CTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACTCGGGGTGGAACTTCTaGGCCATGGCGGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYSGWNF*AMAVMQ
Trigger: CTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGA...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTGAAGGTGCCCTTGTaGAGCTGCTTGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGLKVPL*SCLRQK
Trigger: CTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTGTCGTTCTGCTCCTaGAAGGTGCCCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGLSFCS*KVPLLS
Trigger: GCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAA...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CACTCGGCTTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: HSASARRPVEWFGLSPLDRSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...GTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAAGCCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGTGGCTCTGTTACTTCTaGGAAGCTTCGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSWLCYF*EASSSS
Trigger: GGAGCTGCTCGAAGCTTCCAAGAAGTAACAGAGCCA...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS TCA 90 bp TGCCCACTGCCCACAGAGAACCCTCCACAGAGGGAGACCTTGAGTTaGAGGTGTCAGGCATCACCCCAAGACCAGCCAAATCAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: CPLPTENPPQRETLS*RCQASPQDQPNQAS
Trigger: GCTGGCTTGATTTGGCTGGTCTTGGGGTGATGCCTGACACCTTCAACTCAAGGTCTCCCTCTGTGGAGGGTTCTCTGTGGGCAGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 90 bp CTCCGTGAGAGTCCAGGTATCTGGGAAGATGGCCTGCCGGTCCACTaGCACTACAGCTGGCTCTGTTACTTCTTGGAAGCTTCGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LRESPGIWEDGLPVH*HYSWLCYFLEASSS
Trigger: GCTGCTCGAAGCTTCCAAGAAGTAACAGAGCCAGCTGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCAGATACCTGGACTCTCACGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 90 bp GGGCGTCTGCCATCCTCACAACGCCACCAGCACAGATGGTATAACTaGGGTTCAGAGGCAGAGTCACATCCCACACTGCCAAGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: GRLPSSQRHQHRWYN*GSEAESHPTLPRLD
Trigger: ATCCAGCCTTGGCAGTGTGGGATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS CCA 90 bp CAGGGCGTCTGCTGTCTTGGCTTCACGCAGTGTCCTCATTTCCTCTaGGCCCAATCAGCAATGGGTGGATCCCTCTTTCTCCACCATGGG +
Preference number: 5 (lower is better)
Translates to: QGVCCLGFTQCPHFL*AQSAMGGSLFLHHG
Trigger: CCCATGGTGGAGAAAGAGGGATCCACCCATTGCTGATTGGGCCCAGAGGAAATGAGGACACTGCGTGAAGCCAAGACAGCAGACGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS-3UTR CAA 90 bp AAGAAGTGTTCAGGGTGCCACGTCCGGTCAAGGGCTGTCACCACTTTATCCAGGTCAAGGATTGTGCCATaGAGGGCCTCGCTGGACGGG +
Preference number: 5 (lower is better)
Translates to: KKCSGCHVRSRAVTTLSRSRIVP*RASLDG
Trigger: CCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGA...CCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323871.9
CDS-3UTR CAA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCAAGGATTGTGCCATaGAGGGCCTCGCTGGACGGG +
Preference number: 5 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVSRIVP*RASLDG
Trigger: CCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGA...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGGAGACACTGGAAGTTTaGGCACTGGAGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: KKEGPSSETPAHSASARRETLEV*ALEPYT
Trigger: TGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTC...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGTTGAAGGTGCCCTTGTaGAGCTGCTTGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWLKVPL*SCLRQK
Trigger: CTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TTCTGCCAGGAGGCCAGTGGAGTGGTTTGGACTGTCACCATTAGACCCCGGTGGTCCTTGAAGGTGCCCTaGTTGAGCTGCTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: FCQEASGVVWTVTIRPRWSLKVP*LSCLRQ
Trigger: CTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGA...CCACCGGGGTCTAATGGTGACAGTCCAAACCACTCCACTGGCCTCCTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAAAAGGAGGGACCCTCTTCGGAGACCCCAGCACACTCGGCTTCTGCCAGGAGGTTGTCGTTCTGCTCCTaGAAGGTGCCCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: KKEGPSSETPAHSASARRLSFCS*KVPLLS
Trigger: GCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAA...CCTCCTGGCAGAAGCCGAGTGTGCTGGGGTCTCCGAAGAGGGTCCCTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVRSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: ALCPSRTSGGQGFQFQSGVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...ACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACGGCCCTCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: TALCPSRTSGGQGFQFQSVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...CGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGAGGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGGAGGGAGACCTTGAGTaGAAGGTGTCAGGCATCACC +
Preference number: 5 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVEGDLE*KVSGIT
Trigger: GGTGATGCCTGACACCTTCAACTCAAGGTCTCCCTC...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CAA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACCCCTGGGCCATGAACTaGAAATCCGACAGCGAAGCC +
Preference number: 5 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYPWAMN*KSDSEA
Trigger: GGCTTCGCTGTCGGATTTCAAGTTCATGGCCCAGGG...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424649.6
ENST00000458477.6
CDS-3UTR CAA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCCCCTGGGCCATGAACTaGAAATCCGACAGCGAAGCC +
Preference number: 5 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPPWAMN*KSDSEA
Trigger: GGCTTCGCTGTCGGATTTCAAGTTCATGGCCCAGGG...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000424649.6
ENST00000458477.6
CDS TCA 90 bp CTCTGTGCCCACTGCCCACAGAGAACCCTCCACAGAGGGAGACCTTaGGTTGAAGGTGTCAGGCATCACCCCAAGACCAGCCAAATCAAG +
Preference number: 5 (lower is better)
Translates to: LCAHCPQRTLHRGRP*VEGVRHHPKTSQIK
Trigger: CTTGATTTGGCTGGTCTTGGGGTGATGCCTGACACCTTCAACTCAAGGTCTCCCTCTGTGGAGGGTTCTCTGTGGGCAGTGGGCACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 90 bp AGGCCATGTTCCTCCGTGAGAGTCCAGGTATCTGGGAAGATGGCCTaGCGGTCCACTGCCACTACAGCTGGCTCTGTTACTTCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: RPCSSVRVQVSGKMA*RSTATTAGSVTSWK
Trigger: CTTCCAAGAAGTAACAGAGCCAGCTGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCAGATACCTGGACTCTCACGGAGGAACATGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 90 bp GAGCCAGACCTGAGTTCAAGTGCCAGCTCCCCTCTCTACCATCCATaGCACAGGGCAAATCGCTTAGCTTCTCAGGGCCTGTTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: EPDLSSSASSPLYHP*HRANRLASQGLLSQ
Trigger: CTGAGACAACAGGCCCTGAGAAGCTAAGCGATTTGCCCTGTGGCATGGATGGTAGAGAGGGGAGCTGGCACTTGAACTCAGGTCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536957.5
ENST00000547772.1
ENST00000550205.1
CDS CCA 90 bp CTTCACGCAGTGTCCTCATTTCCTCTGGGCCCAATCAGCAATGGGTaGATCCCTCTTTCTCCACCATGGGCAGGGCCAGCTAAGAAACCC +
Preference number: 5 (lower is better)
Translates to: LHAVSSFPLGPISNG*IPLSPPWAGPAKKP
Trigger: GGGTTTCTTAGCTGGCCCTGCCCATGGTGGAGAAAGAGGGATCCACCCATTGCTGATTGGGCCCAGAGGAAATGAGGACACTGCGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS-3UTR CAA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GTAAGGCTTGTCGTTCTGCTCCTTGAAGGTGCCCTTGTTGAGCTGCTTGAGGCATCGGGGTGGAACTTCTaGGCCATGGCGGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: VRLVVLLLEGALVELLEASGWNF*AMAVMQ
Trigger: CTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGA...TGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CAA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGTTGAAGGTGCCCTTGTaGAGCTGCTTGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FPDPLSADPTCERGGADLLKVPL*SCLRQK
Trigger: CTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CCGTCCTTCTCGTGGAACCCTTCGGGACCAAAGAAGGCTCCACACTGTGCACAGTTGTCGTTCTGCTCCTaGAAGGTGCCCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: PSFSWNPSGPKKAPHCAQLSFCS*KVPLLS
Trigger: GCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAA...CTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CAA 90 bp TCTGTCCATCCCGCACCAGCGGAGGACAAGGGTTCCAGTTTCAGTCGGGTTTACGAGGGAGACCTTGAGTaGAAGGTGTCAGGCATCACC +
Preference number: 5 (lower is better)
Translates to: SVHPAPAEDKGSSFSRVYEGDLE*KVSGIT
Trigger: GGTGATGCCTGACACCTTCAACTCAAGGTCTCCCTC...GTAAACCCGACTGAAACTGGAACCCTTGTCCTCCGCTGGTGCGGGATGGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CAA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGATGCCCTCTGGGCTCCTaGGGGTTTCAGGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRCPLGS*GFQVPG
Trigger: CCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCA...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS TCA 90 bp GGGTGGCACGGCAATCTCCTGGTATGTGTGGTTTCCAGTTGGGTATaGGTAGGGGGTCTCCTCCGACAAGAACACAGGCCGTTTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GWHGNLLVCVVSSWV*VGGLLRQEHRPFGD
Trigger: ATCTCCAAACGGCCTGTGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTGCCGTGCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000440827.3
ENST00000458477.6
ENST00000536957.5
ENST00000538144.5
ENST00000540221.1
ENST00000543331.1
ENST00000546532.5
ENST00000547746.1
ENST00000547983.5
ENST00000548912.5
ENST00000551327.5
ENST00000552550.5
ENST00000637617.2
CDS CCA 90 bp GGGCGTCTTTGTTACCTGCCATCCTCACAACGCCACCAGCACAGATaGTATAACTGCGGTTCAGAGGCAGAGTCACATCCCACACTGCCA +
Preference number: 5 (lower is better)
Translates to: GRLCYLPSSQRHQHR*YNCGSEAESHPTLP
Trigger: TGGCAGTGTGGGATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGGTAACAAAGACGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543331.1
CDS-3UTR CAA 90 bp TTTCCAGACCCCCTGAGTGCCGATCCCACCTGTGAAAGGGGAGGAGCAGATCTGATGTGTGGTTTCCAGTaGGGTATGAGTAGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: FPDPLSADPTCERGGADLMCGFQ*GMSRGS
Trigger: AGACCCCCTACTCATACCCAACTGGAAACCACACAT...CAGATCTGCTCCTCCCCTTTCACAGGTGGGATCGGCACTCAGGGGGTCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp TCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCCGGAGACGGAGGAAGTGATGTGTGGTTTCCAGTaGGGTATGAGTAGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SIKVGTVSRHAVPETEEVMCGFQ*GMSRGS
Trigger: AGACCCCCTACTCATACCCAACTGGAAACCACACAT...CACTTCCTCCGTCTCCGGGACGGCGTGCCTGGACACTGTACCGACTTTGATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATCAAGGATTGTGCCATaGAGGGCCTCGCTGGACGGG +
Preference number: 5 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWESRIVP*RASLDG
Trigger: CCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGCGCAGCCGCCACACTaGGGTGCGAACATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDAQPPH*GANMSK
Trigger: CTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCGCGCAGCCGCCACACTaGGGTGCGAACATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSAQPPH*GANMSK
Trigger: CTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGC...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGTCCCTTGTCGTTCTGCTCCTaGAAGGTGCCCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: AFGWMDLCWHCLEGAGCPLSFCS*KVPLLS
Trigger: GCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAA...GGGACACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGATTTCAGGTCCCTGGGTaGGCCTGGCCACACTTCCCC +
Preference number: 5 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRFQVPG*AWPHFP
Trigger: GGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAA...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 90 bp TGTTACCTGCCATCCTCACAACGCCACCAGCACAGATGGTATAACTaGGGTTCAGAGGCAGAGTCACATCCCACACTGCCAAGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: CYLPSSQRHQHRWYN*GSEAESHPTLPRLD
Trigger: ATCCAGCCTTGGCAGTGTGGGATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGGTAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540221.1
ENST00000543331.1
CDS-3UTR CAA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGAGACACTGGAAGTTTaGGCACTGGAGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVETLEV*ALEPYT
Trigger: TGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGGAGACACTGGAAGTTTaGGCACTGGAGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQETLEV*ALEPYT
Trigger: TGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTC...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTG +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFDACLL*GGGDAL
Trigger: CAGCGCGTCACCTCCACCCAACAGCAGACACGCATC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAATCCAGGCCCTGGATCTaGAAATCCGACAGCGAAGCC +
Preference number: 5 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWESRPWI*KSDSEA
Trigger: GGCTTCGCTGTCGGATTTCAAGATCCAGGGCCTGGA...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS-3UTR CAA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAAGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGCGCAGCCGCCACACTaGGGTGCGAACATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFAQPPH*GANMSK
Trigger: CTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTCGGGGTGGAACTTCTaGGCCATGGCGGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDSGWNF*AMAVMQ
Trigger: CTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTTGTCGTTCTGCTCCTaGAAGGTGCCCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQLSFCS*KVPLLS
Trigger: GCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGTGGCTCTGTTACTTCTaGGAAGCTTCGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQWLCYF*EASSSS
Trigger: GGAGCTGCTCGAAGCTTCCAAGAAGTAACAGAGCCA...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 90 bp CTTCACCTTTGTTACCTGCCATCCTCACAACGCCACCAGCACAGATaGTATAACTGCGGTTCAGAGGCAGAGTCACATCCCACACTGCCA +
Preference number: 5 (lower is better)
Translates to: LHLCYLPSSQRHQHR*YNCGSEAESHPTLP
Trigger: TGGCAGTGTGGGATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGGTAACAAAGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS-3UTR CAA 90 bp AAGAGAGAGCCCCATAGAAGCAGTGGGGGCTCAGAAGGTTCAGTGGGTTCACAGATGTGTGGTTTCCAGTaGGGTATGAGTAGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: KREPHRSSGGSEGSVGSQMCGFQ*GMSRGS
Trigger: AGACCCCCTACTCATACCCAACTGGAAACCACACAT...CTGTGAACCCACTGAACCTTCTGAGCCCCCACTGCTTCTATGGGGCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCAAGGATTGTGCCATaGAGGGCCTCGCTGGACGGG +
Preference number: 5 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPSRIVP*RASLDG
Trigger: CCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTCGGGGTGGAACTTCTaGGCCATGGCGGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFSGWNF*AMAVMQ
Trigger: CTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCGGGGTGGAACTTCTaGGCCATGGCGGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: FKPQCRNLSKSVQCPGTPSGWNF*AMAVMQ
Trigger: CTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGA...CGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAACCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 5 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CTCTGCCTTTGGATGGATGGATTTATGCTGGCATTGTCTGGAGGGAGCCGGGTGGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LCLWMDGFMLALSGGSRVVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...CACCCGGCTCCCTCCAGACAATGCCAGCATAAATCCATCCATCCAAAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATTTCAGGTCCCTGGGTaGGCCTGGCCACACTTCCCC +
Preference number: 5 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEFQVPG*AWPHFP
Trigger: GGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS TCA 90 bp GTTCAGAGGCAGAGTCACATCCCACACTGCCAAGGCTGGATGAAGTaGCAATGCTGGACTCTGATCTCAGGTCTCTTGGACTCCAAACAC +
Preference number: 5 (lower is better)
Translates to: VQRQSHIPHCQGWMK*QCWTLISGLLDSKH
Trigger: GTGTTTGGAGTCCAAGAGACCTGAGATCAGAGTCCAGCATTGTCACTTCATCCAGCCTTGGCAGTGTGGGATGTGACTCTGCCTCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536957.5
ENST00000540221.1
ENST00000543331.1
CDS TCA 90 bp AACAGGCTCTTGGGAGCACAGATCCCTAGGCTGGTGAAGTATTGGTaGGAGGATGCAGTCCTGGGGCACAGAGACACAAGATCACTCATT +
Preference number: 5 (lower is better)
Translates to: NRLLGAQIPRLVKYW*EDAVLGHRDTRSLI
Trigger: AATGAGTGATCTTGTGTCTCTGTGCCCCAGGACTGCATCCTCTCACCAATACTTCACCAGCCTAGGGATCTGTGCTCCCAAGAGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536957.5
ENST00000543331.1
ENST00000550205.1
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTCCAGGCCCTGGATCTaGAAATCCGACAGCGAAGCC +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFSRPWI*KSDSEA
Trigger: GGCTTCGCTGTCGGATTTCAAGATCCAGGGCCTGGA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS-3UTR CAA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGAGCGCAGCCGCCACACTaGGGTGCGAACATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRAQPPH*GANMSK
Trigger: CTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGC...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CACCTAGCAGAAGAGCTTGAGGAAGCAGTTCTGACAGTAAGGCTTGTCGTTCTGTCCTTGAAGGTGCCCTaGTTGAGCTGCTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HLAEELEEAVLTVRLVVLSLKVP*LSCLRQ
Trigger: CTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGA...CAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAAGCTCTTCTGCTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS-3UTR CAA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACTCCTTGAAGGTGCCCTaGTTGAGCTGCTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDSLKVP*LSCLRQ
Trigger: CTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGA...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACCCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 5 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGACCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 5 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCGTGGAGGAGCTGGTCTaGAAATCCGACAGCGAAGCC +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFVEELV*KSDSEA
Trigger: GGCTTCGCTGTCGGATTTCAAGACCAGCTCCTCCAC...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CAA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGATTTCAGGTCCCTGGGTaGGCCTGGCCACACTTCCCC +
Preference number: 5 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRFQVPG*AWPHFP
Trigger: GGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAA...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TCGCCAGGCCTAGGGCACTGGAAGGGTAGGAGGAGCACAGAGAACCTTCCATGGAATGGTCAGGCTTCCTaGTCAAACATTTTGAATCAG +
Preference number: 5 (lower is better)
Translates to: SPGLGHWKGRRSTENLPWNGQAS*SNILNQ
Trigger: CTGATTCAAAATGTTTGACAAGGAAGCCTGACCATT...CCATGGAAGGTTCTCTGTGCTCCTCCTACCCTTCCAGTGCCCTAGGCCTGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS TCA 90 bp TTTACAATGTCAACAGGCTCTTGGGAGCACAGATCCCTAGGCTGGTaGAGTATTGGTGAGAGGATGCAGTCCTGGGGCACAGAGACACAA +
Preference number: 5 (lower is better)
Translates to: FTMSTGSWEHRSLGW*SIGERMQSWGTETQ
Trigger: TTGTGTCTCTGTGCCCCAGGACTGCATCCTCTCACCAATACTTCACCAGCCTAGGGATCTGTGCTCCCAAGAGCCTGTTGACATTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536957.5
ENST00000543331.1
ENST00000550205.1
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGATGCGTGTCTGCTGTaGGGTGGAGGTGACGCGCTG +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSDACLL*GGGDAL
Trigger: CAGCGCGTCACCTCCACCCAACAGCAGACACGCATC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGGCGACCCCCAGCTaGTTCAGGTCAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSVATPS*FRSDCR
Trigger: CCTGCAGTCTGACCTGAACAAGCTGGGGGTCGCCAC...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGCCCCGCAGACTCCTTaGGCGACTGTGGCGACCCCC +
Preference number: 5 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEAPQTP*ATVATP
Trigger: GGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGATTGAAGGTGCCCTTGTaGAGCTGCTTGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRLKVPL*SCLRQK
Trigger: CTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGAGCTTGCTGGCCTGGGAAGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: KGCNTLQPVSVKSLLAWEVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...TTCCCAGGCCAGCAAGCTCTTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAGGCACGCCGTCCAATGTCAACAGGCTCTaGGGAGCACAGATCCCTAGG +
Preference number: 5 (lower is better)
Translates to: KPQCRNLSKSVQCPGTPSNVNRL*GAQIPR
Trigger: CCTAGGGATCTGTGCTCCCAAGAGCCTGTTGACATT...GGACGGCGTGCCTGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR CAA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGCCGGCGATGGGCTTCTaGCAGGCCCCGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEPAMGF*QAPQTP
Trigger: AGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGG...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCATCGGGGTGGAACTTCTaGGCCATGGCGGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSSGWNF*AMAVMQ
Trigger: CTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGA...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATTGAAGGTGCCCTTGTaGAGCTGCTTGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKLKVPL*SCLRQK
Trigger: CTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATCCTTGAAGGTGCCCTaGTTGAGCTGCTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSESLKVP*LSCLRQ
Trigger: CTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACAGGCCCAGTGGCGGTGGATGAGGAAGAGAATACAAAAGGGAACGTCTTTAAATTGTCGTTCTGCTCCTaGAAGGTGCCCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: TGPVAVDEEENTKGNVFKLSFCS*KVPLLS
Trigger: GCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAA...TTTAAAGACGTTCCCTTTTGTATTCTCTTCCTCATCCACCGCCACTGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSRSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAACCTTCCATGGCCCCTTaGGTTCTCTGCCTTTGGATG +
Preference number: 5 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEPSMAP*VLCLWM
Trigger: CATCCAAAGGCAGAGAACCAAAGGGGCCATGGAAGG...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGAGAAGGCAGAAGAGAGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: QSPDGQNQTPAFLRRQKRVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...TCTCTTCTGCCTTCTCAGGAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GAGCAGATCTGGGGAAGGGATATGCCCAGAGGAAATCAACAAGACCAAAGAGACGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: EQIWGRDMPRGNQQDQRDVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...GTCTCTTTGGTCTTGTTGATTTCCTCTGGGCATATCCCTTCCCCAGATCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS GCA 90 bp AGTACTGGTGTGAGGTTTATAAGGGCTAGCAGGTACACTGGAAGCTaGAGACATCAGTTGCAAATATCAGGCTCTCCAGACCCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: STGVRFIRASRYTGS*RHQLQISGSPDPSH
Trigger: GTGACTTGGGTCTGGAGAGCCTGATATTTGCAACTGATGTCTGCAGCTTCCAGTGTACCTGCTAGCCCTTATAAACCTCACACCAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547746.1
ENST00000547772.1
ENST00000550205.1
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCATGTGTGGTTTCCAGTaGGGTATGAGTAGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFMCGFQ*GMSRGS
Trigger: AGACCCCCTACTCATACCCAACTGGAAACCACACAT...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAATTGTCGTTCTGCTCCTaGAAGGTGCCCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSELSFCS*KVPLLS
Trigger: GCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAA...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCCTGATCTCAGGTCTCTaGGACTCCAAACACCCAACA +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFLISGL*DSKHPT
Trigger: TGTTGGGTGTTTGGAGTCCAAGAGACCTGAGATCAG...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR CAA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCATCAAGGATTGTGCCATaGAGGGCCTCGCTGGACGGG +
Preference number: 5 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPSRIVP*RASLDG
Trigger: CCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGA...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGGTCAGGGGCCCAGCTTaGCCTCCCAAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKEVRGPA*PPKGLL
Trigger: TAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGAC...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCATCCTTGAAGGTGCCCTaGTTGAGCTGCTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSSLKVP*LSCLRQ
Trigger: CTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGA...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCAAGGTCACAGTCGCAGTaGGGGATGCTGGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPRSQSQ*GMLAGE
Trigger: TTCCCCAGCCAGCATCCCCAACTGCGACTGTGACCT...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp GTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCAGTGAAGTTTCAGTGAAGAGCTaGCTGGCCTGGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: VQNSRPKRVQHPSTSFSEVSVKS*LAWEVK
Trigger: CTTTACTTCCCAGGCCAGCAAGCTCTTCACTGAAAC...TTCACTGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp CGATATGAATTCAAACCTCAGTGTAGAAATCTATCAAAGTCGGTACAGTGTCCACCCTCTCGGTCATCTTaGCACCTAGCTGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: RYEFKPQCRNLSKSVQCPPSRSS*HLAAPW
Trigger: CCACGGAGCAGCTAGGTGCAAAGATGACCGAGAGGG...TGGACACTGTACCGACTTTGATAGATTTCTACACTGAGGTTTGAATTCATATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACTGCACATCCACTGCTaGGGACAGAGGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSLHIHC*GQRTFQ
Trigger: TTGGAAGGTCCTCTGTCCCAAGCAGTGGATGTGCAG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS TCA 90 bp ACACCCAACAGAAGACAAATGGTCAGGCTTCCTTGTCAAACATTTTaGATCAGGGACTCCACCAAACACCCGCTCCACCACAATGTGATT +
Preference number: 5 (lower is better)
Translates to: TPNRRQMVRLPCQTF*IRDSTKHPLHHNVI
Trigger: AATCACATTGTGGTGGAGCGGGTGTTTGGTGGAGTCCCTGATTCAAAATGTTTGACAAGGAAGCCTGACCATTTGTCTTCTGTTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS TCA 90 bp GTACTAACTTCTTCTAAGTCTCCTAAGTCTTTTCTGGGTAGAATATaGGCAAACCATGAAAAGGGCAACCGAGGTCGTCCATGGCCGGAC +
Preference number: 5 (lower is better)
Translates to: VLTSSKSPKSFLGRI*ANHEKGNRGRPWPD
Trigger: GTCCGGCCATGGACGACCTCGGTTGCCCTTTTCATGGTTTGCTCATATTCTACCCAGAAAAGACTTAGGAGACTTAGAAGAAGTTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547746.1
ENST00000547772.1
CDS CCA 90 bp CTCCACCACAATGTGATTCTAAGCCTGGGCTTTTGGTTTATGGATTaGATTCAGGTTTACAATGTCAACAGGCTCTTGGGAGCACAGATC +
Preference number: 5 (lower is better)
Translates to: LHHNVILSLGFWFMD*IQVYNVNRLLGAQI
Trigger: GATCTGTGCTCCCAAGAGCCTGTTGACATTGTAAACCTGAATCCAATCCATAAACCAAAAGCCCAGGCTTAGAATCACATTGTGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS-3UTR CAA 90 bp ATAAAGTTCAGAATTCTAGGCCCAAAAGGGTGCAACACCCTTCAACCAGTTTCACGTCTCAAAGACGCATaGTGCCTGATGAAGCTAAGC +
Preference number: 5 (lower is better)
Translates to: IKFRILGPKGCNTLQPVSRLKDA*CLMKLS
Trigger: GCTTAGCTTCATCAGGCACAATGCGTCTTTGAGACG...TGAAACTGGTTGAAGGGTGTTGCACCCTTTTGGGCCTAGAATTCTGAACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS-3UTR CAA 90 bp ACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGACACCAGCTTTCTCCTTGTCAAACATTTaGAATCAGGGACTCCACCAA +
Preference number: 5 (lower is better)
Translates to: TRPKRRQSPDGQNQTPAFSLSNI*NQGLHQ
Trigger: TTGGTGGAGTCCCTGATTCAAAATGTTTGACAAGGA...GAAAGCTGGTGTCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS-3UTR CAA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTCCTTGAAGGTGCCCTaGTTGAGCTGCTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKESLKVP*LSCLRQ
Trigger: CTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp TTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAGCTATGAAGTGAAAGAGTTGAAGGTGCCCTTGTaGAGCTGCTTGAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FPNTAVYKTVLVSYEVKELKVPL*SCLRQK
Trigger: CTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAA...CTCTTTCACTTCATAGCTCACCAGGACTGTTTTATAAACTGCTGTATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000458477.6
ENST00000536957.5
ENST00000637617.2
ENST00000637624.1
CDS-3UTR CAA 90 bp AGAGGAAATCAACAAGACCAAAGAGACGTCAGAGTCCTGATGGCCAAAATCAGATCTAAGCCTGGGCTTTaGGTTTATGGATTGGATTCA +
Preference number: 5 (lower is better)
Translates to: RGNQQDQRDVRVLMAKIRSKPGL*VYGLDS
Trigger: TGAATCCAATCCATAAACCAAAAGCCCAGGCTTAGA...TCTGATTTTGGCCATCAGGACTCTGACGTCTCTTTGGTCTTGTTGATTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS TCA 90 bp GTACTAACTTCTTCTAAGTCTCCTAAGTCTTTTCTGGGTAGAATATaGGCAAACCATGAAAAGGGCAACCTCTCTGTGCTTCAGTGTCGT +
Preference number: 5 (lower is better)
Translates to: VLTSSKSPKSFLGRI*ANHEKGNLSVLQCR
Trigger: ACGACACTGAAGCACAGAGAGGTTGCCCTTTTCATGGTTTGCTCATATTCTACCCAGAAAAGACTTAGGAGACTTAGAAGAAGTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550205.1
CDS GCA 72 bp GCCGGACCACGGGCGCCGGCTCAGGGTCGCGCTAGCTaGCCGTCCCGGGGCCGCTCGTCTATGCCCCGCAAC +
Preference number: 6 (lower is better)
Translates to: AGPRAPAQGRAS*PSRGRSSMPRN
Trigger: GTTGCGGGGCATAGACGAGCGGCCCCGGGACGGGCAGCTAGCGCGACCCTGAGCCGGCGCCCGTGGTCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000440827.3
ENST00000547772.1
ENST00000547983.5
ENST00000637617.2
CDS GCA 72 bp GTCGCGCTAGCTGCCCGTCCCGGGGCCGCTCGTCTATaGCCCGCAACTTTTCCGCCGCGAGCCTCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: VALAARPGAARL*PATFPPRASAR
Trigger: CCGGGCCGAGGCTCGCGGCGGAAAAGTTGCGGGGCATAGACGAGCGGCCCCGGGACGGGCAGCTAGCGCGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000424649.6
ENST00000547772.1
ENST00000547983.5
ENST00000637617.2
CDS CCA 72 bp TGCACAGTGATGATGACGCCCTCGGTCAGCCAGTCCTaGGCAGAGGGCCCCGCCGCCTCCGCCGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: CTVMMTPSVSQS*AEGPAASAGSS
Trigger: AGAGGAGCCGGCGGAGGCGGCGGGGCCCTCTGCCCAGGACTGGCTGACCGAGGGCGTCATCATCACTGTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 72 bp GGCTCCTCTGCCTCAGGCTGGATGCCCAGCCGCCCCTaGAGCTCCGCGATGAGCTGTTCCTGGGATGGGGTC +
Preference number: 6 (lower is better)
Translates to: GSSASGWMPSRP*SSAMSCSWDGV
Trigger: GACCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATCCAGCCTGAGGCAGAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 72 bp CGGCGAGGGGAGGGCTCCCGGGACATGGGGTGTGCGTaGCCAGACTCCCAGCTCCTCCTGATCACAGATCGG +
Preference number: 6 (lower is better)
Translates to: RRGEGSRDMGCA*PDSQLLLITDR
Trigger: CCGATCTGTGATCAGGAGGAGCTGGGAGTCTGGCCACGCACACCCCATGTCCCGGGAGCCCTCCCCTCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 72 bp CCCAGCCGCCCCTGCAGCTCCGCGATGAGCTGTTCCTaGGATGGGGTCCTGCTCAAGGTGGCAGGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: PSRPCSSAMSCS*DGVLLKVAGSS
Trigger: GCTGGACCCTGCCACCTTGAGCAGGACCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 72 bp AGCCATGGGCATCTCCTCGCCACCTTCTCTACGAGCTaGCCCCCGGCCCGCTTCCCACGTGGCTGCACAGTG +
Preference number: 6 (lower is better)
Translates to: SHGHLLATFSTS*PPARFPRGCTV
Trigger: CACTGTGCAGCCACGTGGGAAGCGGGCCGGGGGGCAGCTCGTAGAGAAGGTGGCGAGGAGATGCCCATGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637624.1
CDS CAA 90 bp CCTTCCCGTCCTGGGTGGCAGCTTCCGTGGTGCCCTCTGGGCTCCTaGGGGTTTCAGGTCCCTGGGTTGGCCTGGCCACACTTCCCCTCT +
Preference number: 6 (lower is better)
Translates to: PSRPGWQLPWCPLGS*GFQVPGLAWPHFPS
Trigger: AGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 72 bp GCTGTTCCTTCCCGTCCTGGGTGGCAGCTTCCGTGGTaGCCTCTGGGCTCCTTGGGGTTTCAGGTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: AVPSRPGWQLPW*PLGSLGFQVPG
Trigger: CCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 72 bp GCCCGAATACCTCCGAAGCCCATGGCTGCTCCCATGTaGCAGCCAAGGCCTCCTCTGGGCACGAAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: ARIPPKPMAAPM*QPRPPLGTKGW
Trigger: CCAGCCCTTCGTGCCCAGAGGAGGCCTTGGCTGCCACATGGGAGCAGCCATGGGCTTCGGAGGTATTCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 72 bp CTTCCCGTCCTGGGTGGCAGCTTCCGTGGTGCCCTCTaGGCTCCTTGGGGTTTCAGGTCCCTGGGTTGGCCT +
Preference number: 6 (lower is better)
Translates to: LPVLGGSFRGAL*APWGFRSLGWP
Trigger: AGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CAA 72 bp CCAGCCGGCCGCCCAGCACCGCTCCCCATCCGCTCTTaGCTCCAGGCCCTGGATCTTGAAATCCGACAGCGA +
Preference number: 6 (lower is better)
Translates to: PAGRPAPLPIRS*LQALDLEIRQR
Trigger: TCGCTGTCGGATTTCAAGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGAGCGGTGCTGGGCGGCCGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228307.11
ENST00000536957.5
CDS TCA 72 bp TCTGTTCCAAGGCCCAGGACCCCGGGTCTGGTCGCCTaGCCTCCAAGGAAGTTCAGGTCCTACAGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: SVPRPRTPGLVA*PPRKFRSYSPP
Trigger: GGGCGGGCTGTAGGACCTGAACTTCCTTGGAGGTCAGGCGACCAGACCCGGGGTCCTGGGCCTTGGAACAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546532.5
ENST00000548912.5
CDS CCA 72 bp GTGGTGCCCTCTGGGCTCCTTGGGGTTTCAGGTCCCTaGGTTGGCCTGGCCACACTTCCCCTCTCGGTCATC +
Preference number: 6 (lower is better)
Translates to: VVPSGLLGVSGP*VGLATLPLSVI
Trigger: GATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 72 bp CACATGGAAGCTCTGGCTGTTCCTTCCCGTCCTGGGTaGCAGCTTCCGTGGTGCCCTCTGGGCTCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: HMEALAVPSRPG*QLPWCPLGSLG
Trigger: CCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 72 bp CTCCGTGGTGCTGGGTGTGCCCATGGCCATGGCACATaGAAGCTCTGGCTGTTCCTTCCCGTCCTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: LRGAGCAHGHGT*KLWLFLPVLGG
Trigger: GCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS TCA 72 bp CAGTGTGGCAGCGGGGAGCCCCAGAGAGCTCACTTGTaGTGGTCGGCAGGTGCCTCCAATCTCGACCCTGAC +
Preference number: 6 (lower is better)
Translates to: QCGSGEPQRAHL*WSAGASNLDPD
Trigger: GTCAGGGTCGAGATTGGAGGCACCTGCCGACCATCACAAGTGAGCTCTCTGGGGCTCCCCGCTGCCACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 72 bp TTCCCTCCTGACAGGGCCGCGCAGCCGCGAGTGAAGTaGCTGTCTGGAACTCTGAATCTGCAGGGCAACGCG +
Preference number: 6 (lower is better)
Translates to: FPPDRAAQPRVK*LSGTLNLQGNA
Trigger: CGCGTTGCCCTGCAGATTCAGAGTTCCAGACAGGCACTTCACTCGCGGCTGCGCGGCCCTGTCAGGAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552550.5
CDS GCA 72 bp TTCCCTCCTGACAGGGCCGCGCAGCCGCGAGTGAAGTaGCTGTCTGGAACTCTGAATCCCATGCTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: FPPDRAAQPRVK*LSGTLNPMLLP
Trigger: GGGCAGGAGCATGGGATTCAGAGTTCCAGACAGGCACTTCACTCGCGGCTGCGCGGCCCTGTCAGGAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546532.5
CDS CCA 72 bp GGGCATTCTCTCAGGCCCGAATACCTCCGAAGCCCATaGCTGCTCCCATGTGGCAGCCAAGGCCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: GHSLRPEYLRSP*LLPCGSQGLLW
Trigger: CCAGAGGAGGCCTTGGCTGCCACATGGGAGCAGCCATGGGCTTCGGAGGTATTCGGGCCTGAGAGAATGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 72 bp GCCCTCTGGGCTCCTTGGGGTTTCAGGTCCCTGGGTTaGCCTGGCCACACTTCCCCTCTCGGTCATCTTTGC +
Preference number: 6 (lower is better)
Translates to: ALWAPWGFRSLG*PGHTSPLGHLC
Trigger: GCAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 72 bp GCTGGGTGTGCCCATGGCCATGGCACATGGAAGCTCTaGCTGTTCCTTCCCGTCCTGGGTGGCAGCTTCCGT +
Preference number: 6 (lower is better)
Translates to: AGCAHGHGTWKL*LFLPVLGGSFR
Trigger: ACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CAA 90 bp CTTCCGTGGTGCCCTCTGGGCTCCTTGGGGTTTCAGGTCCCTGGGTaGGCCTGGCCACACTTCCCCTCTCGGTCATCTTTGCACCTAGCT +
Preference number: 6 (lower is better)
Translates to: LPWCPLGSLGFQVPG*AWPHFPSRSSLHLA
Trigger: AGCTAGGTGCAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCACCACGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 72 bp CTGGGGGCTACAGGAGGTAGAAGGCCTCGTCCACTCTaGTCAGTACAAGGGAACTCCGGAGTGTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LGATGGRRPRPL*SVQGNSGVWPW
Trigger: CCAGGGCCACACTCCGGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCCTTCTACCTCCTGTAGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 72 bp ATTCTCTCAGGCCCGAATACCTCCGAAGCCCATGGCTaGTCCCATGTGGCAGCCAAGGCCTCCTCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: ILSGPNTSEAHG*SHVAAKASSGH
Trigger: GTGCCCAGAGGAGGCCTTGGCTGCCACATGGGAGCAGCCATGGGCTTCGGAGGTATTCGGGCCTGAGAGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 72 bp TTCCCTCCTGACAGGGCCGCGCAGCCGCGAGTGAAGTaGCTGTCTGGAACTCTGAATCGAGGTCGTCCATGG +
Preference number: 6 (lower is better)
Translates to: FPPDRAAQPRVK*LSGTLNRGRPW
Trigger: CCATGGACGACCTCGATTCAGAGTTCCAGACAGGCACTTCACTCGCGGCTGCGCGGCCCTGTCAGGAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547983.5
CDS CCA 72 bp CGTCCACTCTGCTCAGTACAAGGGAACTCCGGAGTGTaGCCCTGGCCTCGAGGGGAGGGTATAGTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: RPLCSVQGNSGV*PWPRGEGIVVG
Trigger: ACCCACCACTATACCCTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCCTTGTACTGAGCAGAGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 72 bp ATGGCACATGGAAGCTCTGGCTGTTCCTTCCCGTCCTaGGTGGCAGCTTCCGTGGTGCCCTCTGGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: MAHGSSGCSFPS*VAASVVPSGLL
Trigger: AAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CAA 72 bp TGCCCTCTGGGCTCCTTGGGGTTTCAGGTCCCTGGGTaGGCCTGGCCACACTTCCCCTCTCGGTCATCTTTG +
Preference number: 6 (lower is better)
Translates to: CPLGSLGFQVPG*AWPHFPSRSSL
Trigger: CAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS TCA 72 bp CTTGTGATGGTCGGCAGGTGCCTCCAATCTCGACCCTaGCTCTCTGTGCCCACTGCCCACAGAGAACCCTCC +
Preference number: 6 (lower is better)
Translates to: LVMVGRCLQSRP*LSVPTAHREPS
Trigger: GGAGGGTTCTCTGTGGGCAGTGGGCACAGAGAGTCAGGGTCGAGATTGGAGGCACCTGCCGACCATCACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS TCA 72 bp CCAGGCAGGCTCAGGAGGGCTGCCAAGTCGTGTCTCTaGGGAGTGACTGCAGTGTTCCAGGCATCACGACCA +
Preference number: 6 (lower is better)
Translates to: PGRLRRAAKSCL*GVTAVFQASRP
Trigger: TGGTCGTGATGCCTGGAACACTGCAGTCACTCCTCAGAGACACGACTTGGCAGCCCTCCTGAGCCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS GCA 72 bp GCCACACTTCCCCTCTCGGTCATCTTTGCACCTAGCTaGTCCGTGGTAACTGAGGCAGGGGAGCTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: ATLPLSVIFAPS*SVVTEAGELLP
Trigger: GGGAAGCAGCTCCCCTGCCTCAGTTACCACGGAGCAGCTAGGTGCAAAGATGACCGAGAGGGGAAGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 72 bp GGCCAGAGGTGGAAATCCTCTCCGTGGTGCTGGGTGTaGCCATGGCCATGGCACATGGAAGCTCTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: GQRWKSSPWCWV*PWPWHMEALAV
Trigger: AACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAGAGGATTTCCACCTCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 72 bp GTCTCCTCCGACAAGAACACAGGCCGTTTGGAGATGTaGGAGGTGGTAGACTCCAAGTCCGCCAGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: VSSDKNTGRLEM*EVVDSKSASRA
Trigger: CGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTCCAAACGGCCTGTGTTCTTGTCGGAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000440827.3
ENST00000458477.6
ENST00000536957.5
ENST00000538144.5
ENST00000540221.1
ENST00000543331.1
ENST00000546532.5
ENST00000547746.1
ENST00000547983.5
ENST00000548912.5
ENST00000551327.5
ENST00000552550.5
ENST00000637617.2
CDS CCA 72 bp TCTTGGAGAGCTGTGCTCCCAGCACAGGGTACAGTGTaGCAGCGGGGAGCCCCAGAGAGCTCACTTGTGATG +
Preference number: 6 (lower is better)
Translates to: SWRAVLPAQGTV*QRGAPESSLVM
Trigger: CATCACAAGTGAGCTCTCTGGGGCTCCCCGCTGCCACACTGTACCCTGTGCTGGGAGCACAGCTCTCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 72 bp CTGGGCTCCTTGGGGTTTCAGGTCCCTGGGTTGGCCTaGCCACACTTCCCCTCTCGGTCATCTTTGCACCTA +
Preference number: 6 (lower is better)
Translates to: LGSLGFQVPGLA*PHFPSRSSLHL
Trigger: TAGGTGCAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 72 bp ATCGGATCTGGCCAGAGGTGGAAATCCTCTCCGTGGTaGTGGGTGTGCCCATGGCCATGGCACATGGAAGCT +
Preference number: 6 (lower is better)
Translates to: IGSGQRWKSSPW*WVCPWPWHMEA
Trigger: AGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAGAGGATTTCCACCTCTGGCCAGATCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS GCA 72 bp CAGGAGGGCTGCCAAGTCGTGTCTCTGAGGAGTGACTaGAGTGTTCCAGGCATCACGACCACTCCTCCACAC +
Preference number: 6 (lower is better)
Translates to: QEGCQVVSLRSD*SVPGITTTPPH
Trigger: GTGTGGAGGAGTGGTCGTGATGCCTGGAACACTGCAGTCACTCCTCAGAGACACGACTTGGCAGCCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458477.6
CDS GCA 72 bp GGAGGTGGTAGACTCCAAGTCCGCCAGCAGGGCGTCTaGCATCCTCACAACGCCACCAGCACAGATGGTATA +
Preference number: 6 (lower is better)
Translates to: GGGRLQVRQQGV*HPHNATSTDGI
Trigger: TATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS CCA 72 bp TGCTGGTGGATGAATCGGGAGCTGCTGGGCTGCCACTaGTCTAAGGGGTCAAGGATTGTGCCATTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: CWWMNRELLGCH*SKGSRIVPLRA
Trigger: GGCCCTCAATGGCACAATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCGATTCATCCACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000440827.3
ENST00000458477.6
ENST00000536957.5
ENST00000538144.5
ENST00000543331.1
ENST00000546532.5
ENST00000547983.5
ENST00000548912.5
ENST00000551327.5
ENST00000552550.5
ENST00000637617.2
CDS CCA 72 bp CAGGCATCACCCCAAGACCAGCCAAATCAAGCCAGCTaGGGGCTACAGGAGGTAGAAGGCCTCGTCCACTCT +
Preference number: 6 (lower is better)
Translates to: QASPQDQPNQAS*GLQEVEGLVHS
Trigger: AGAGTGGACGAGGCCTTCTACCTCCTGTAGCCCCCAGCTGGCTTGATTTGGCTGGTCTTGGGGTGATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 72 bp AAATCCTCTCCGTGGTGCTGGGTGTGCCCATGGCCATaGCACATGGAAGCTCTGGCTGTTCCTTCCCGTCCT +
Preference number: 6 (lower is better)
Translates to: KSSPWCWVCPWP*HMEALAVPSRP
Trigger: AGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACACCCAGCACCACGGAGAGGATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323871.9
ENST00000637617.2
ENST00000637624.1
CDS CCA 72 bp CGCAGTGTCCTCATTTCCTCTGGGCCCAATCAGCAATaGGTGGATCCCTCTTTCTCCACCATGGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RSVLISSGPNQQ*VDPSFSTMGRA
Trigger: GGCCCTGCCCATGGTGGAGAAAGAGGGATCCACCCATTGCTGATTGGGCCCAGAGGAAATGAGGACACTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS TCA 72 bp CACTGCCCACAGAGAACCCTCCACAGAGGGAGACCTTaGGTTGAAGGTGTCAGGCATCACCCCAAGACCAGC +
Preference number: 6 (lower is better)
Translates to: HCPQRTLHRGRP*VEGVRHHPKTS
Trigger: GCTGGTCTTGGGGTGATGCCTGACACCTTCAACTCAAGGTCTCCCTCTGTGGAGGGTTCTCTGTGGGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS GCA 72 bp TCCTCCGTGAGAGTCCAGGTATCTGGGAAGATGGCCTaGCGGTCCACTGCCACTACAGCTGGCTCTGTTACT +
Preference number: 6 (lower is better)
Translates to: SSVRVQVSGKMA*RSTATTAGSVT
Trigger: AGTAACAGAGCCAGCTGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCAGATACCTGGACTCTCACGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 72 bp TGGGAAGATGGCCTGCCGGTCCACTGCCACTACAGCTaGCTCTGTTACTTCTTGGAAGCTTCGAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WEDGLPVHCHYS*LCYFLEASSSS
Trigger: GGAGCTGCTCGAAGCTTCCAAGAAGTAACAGAGCCAGCTGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS CCA 72 bp GTGTCCTCATTTCCTCTGGGCCCAATCAGCAATGGGTaGATCCCTCTTTCTCCACCATGGGCAGGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: VSSFPLGPISNG*IPLSPPWAGPA
Trigger: AGCTGGCCCTGCCCATGGTGGAGAAAGAGGGATCCACCCATTGCTGATTGGGCCCAGAGGAAATGAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS CCA 72 bp GGGCGTCTGCCATCCTCACAACGCCACCAGCACAGATaGTATAACTGCGGTTCAGAGGCAGAGTCACATCCC +
Preference number: 6 (lower is better)
Translates to: GRLPSSQRHQHR*YNCGSEAESHP
Trigger: GGGATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536957.5
CDS CAA 72 bp ATCCTTGAAGGCCCACTGGGGCCAGGAGCTTCACCTTaGTTACCTGCCATCCTCACAACGCCACCAGCACAG +
Preference number: 6 (lower is better)
Translates to: ILEGPLGPGASP*LPAILTTPPAQ
Trigger: CTGTGCTGGTGGCGTTGTGAGGATGGCAGGTAACAAAGGTGAAGCTCCTGGCCCCAGTGGGCCTTCAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS GCA 72 bp CTGAGTTCAAGTGCCAGCTCCCCTCTCTACCATCCATaGCACAGGGCAAATCGCTTAGCTTCTCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: LSSSASSPLYHP*HRANRLASQGL
Trigger: CAGGCCCTGAGAAGCTAAGCGATTTGCCCTGTGGCATGGATGGTAGAGAGGGGAGCTGGCACTTGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536957.5
ENST00000547772.1
ENST00000550205.1
CDS CCA 72 bp CCAATCAGCAATGGGTGGATCCCTCTTTCTCCACCATaGGCAGGGCCAGCTAAGAAACCCCATAGGACTCCC +
Preference number: 6 (lower is better)
Translates to: PISNGWIPLSPP*AGPAKKPHRTP
Trigger: GGGAGTCCTATGGGGTTTCTTAGCTGGCCCTGCCCATGGTGGAGAAAGAGGGATCCACCCATTGCTGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540221.1
CDS TCA 72 bp GGCAATCTCCTGGTATGTGTGGTTTCCAGTTGGGTATaGGTAGGGGGTCTCCTCCGACAAGAACACAGGCCG +
Preference number: 6 (lower is better)
Translates to: GNLLVCVVSSWV*VGGLLRQEHRP
Trigger: CGGCCTGTGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000440827.3
ENST00000458477.6
ENST00000536957.5
ENST00000538144.5
ENST00000540221.1
ENST00000543331.1
ENST00000546532.5
ENST00000547746.1
ENST00000547983.5
ENST00000548912.5
ENST00000551327.5
ENST00000552550.5
ENST00000637617.2
CDS TCA 72 bp CCCACAGAGAACCCTCCACAGAGGGAGACCTTGAGTTaGAGGTGTCAGGCATCACCCCAAGACCAGCCAAAT +
Preference number: 6 (lower is better)
Translates to: PTENPPQRETLS*RCQASPQDQPN
Trigger: ATTTGGCTGGTCTTGGGGTGATGCCTGACACCTTCAACTCAAGGTCTCCCTCTGTGGAGGGTTCTCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323871.9
ENST00000637617.2
CDS TCA 72 bp TCAACAGGCTCTTGGGAGCACAGATCCCTAGGCTGGTaGAGTATTGGTGAGAGGATGCAGTCCTGGGGCACA +
Preference number: 6 (lower is better)
Translates to: STGSWEHRSLGW*SIGERMQSWGT
Trigger: TGTGCCCCAGGACTGCATCCTCTCACCAATACTTCACCAGCCTAGGGATCTGTGCTCCCAAGAGCCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536957.5
ENST00000543331.1
ENST00000550205.1
CDS GCA 72 bp CCATCCTCACAACGCCACCAGCACAGATGGTATAACTaGGGTTCAGAGGCAGAGTCACATCCCACACTGCCA +
Preference number: 6 (lower is better)
Translates to: PSSQRHQHRWYN*GSEAESHPTLP
Trigger: TGGCAGTGTGGGATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536957.5
ENST00000540221.1
ENST00000543331.1
CDS TCA 72 bp TTGGGAGCACAGATCCCTAGGCTGGTGAAGTATTGGTaGGAGGATGCAGTCCTGGGGCACAGAGACACAAGA +
Preference number: 6 (lower is better)
Translates to: LGAQIPRLVKYW*EDAVLGHRDTR
Trigger: TCTTGTGTCTCTGTGCCCCAGGACTGCATCCTCTCACCAATACTTCACCAGCCTAGGGATCTGTGCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536957.5
ENST00000543331.1
ENST00000550205.1
CDS CCA 72 bp TGTTACCTGCCATCCTCACAACGCCACCAGCACAGATaGTATAACTGCGGTTCAGAGGCAGAGTCACATCCC +
Preference number: 6 (lower is better)
Translates to: CYLPSSQRHQHR*YNCGSEAESHP
Trigger: GGGATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGGTAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540221.1
ENST00000543331.1
CDS CAA 72 bp GTGGCACGGCAATCTCCTGGTATGTGTGGTTTCCAGTaGGGTATGAGTAGGGGGTCTCCTCCGACAAGAACA +
Preference number: 6 (lower is better)
Translates to: VARQSPGMCGFQ*GMSRGSPPTRT
Trigger: TGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTGCCGTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000228307.11
ENST00000267257.11
ENST00000323871.9
ENST00000424649.6
ENST00000440827.3
ENST00000458477.6
ENST00000536957.5
ENST00000538144.5
ENST00000540221.1
ENST00000543331.1
ENST00000546532.5
ENST00000547746.1
ENST00000547983.5
ENST00000548912.5
ENST00000551327.5
ENST00000552550.5
ENST00000637617.2
CDS TCA 72 bp AGAAGACAAATGGTCAGGCTTCCTTGTCAAACATTTTaGATCAGGGACTCCACCAAACACCCGCTCCACCAC +
Preference number: 6 (lower is better)
Translates to: RRQMVRLPCQTF*IRDSTKHPLHH
Trigger: GTGGTGGAGCGGGTGTTTGGTGGAGTCCCTGATTCAAAATGTTTGACAAGGAAGCCTGACCATTTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS GCA 72 bp GTGAGGTTTATAAGGGCTAGCAGGTACACTGGAAGCTaGAGACATCAGTTGCAAATATCAGGCTCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: VRFIRASRYTGS*RHQLQISGSPD
Trigger: GTCTGGAGAGCCTGATATTTGCAACTGATGTCTGCAGCTTCCAGTGTACCTGCTAGCCCTTATAAACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547746.1
ENST00000547772.1
ENST00000550205.1
CDS CAA 90 bp TCTTGGACTCCAAACACCCAACAGAAGACAAATGGTCAGGCTTCCTaGTCAAACATTTTGAATCAGGGACTCCACCAAACACCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: SWTPNTQQKTNGQAS*SNILNQGLHQTPAP
Trigger: TGGAGCGGGTGTTTGGTGGAGTCCCTGATTCAAAATGTTTGACAAGGAAGCCTGACCATTTGTCTTCTGTTGGGTGTTTGGAGTCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS CAA 90 bp AACACCCAACAGAAGACAAATGGTCAGGCTTCCTTGTCAAACATTTaGAATCAGGGACTCCACCAAACACCCGCTCCACCACAATGTGAT +
Preference number: 6 (lower is better)
Translates to: NTQQKTNGQASLSNI*NQGLHQTPAPPQCD
Trigger: ATCACATTGTGGTGGAGCGGGTGTTTGGTGGAGTCCCTGATTCAAAATGTTTGACAAGGAAGCCTGACCATTTGTCTTCTGTTGGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS CAA 72 bp ATGGATTGGATTCAGGTTTACAATGTCAACAGGCTCTaGGGAGCACAGATCCCTAGGCTGGTGAAGTATTGG +
Preference number: 6 (lower is better)
Translates to: MDWIQVYNVNRL*GAQIPRLVKYW
Trigger: CCAATACTTCACCAGCCTAGGGATCTGTGCTCCCAAGAGCCTGTTGACATTGTAAACCTGAATCCAATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS CAA 90 bp GCTCCACCACAATGTGATTCTAAGCCTGGGCTTTTGGTTTATGGATaGGATTCAGGTTTACAATGTCAACAGGCTCTTGGGAGCACAGAT +
Preference number: 6 (lower is better)
Translates to: APPQCDSKPGLLVYG*DSGLQCQQALGSTD
Trigger: ATCTGTGCTCCCAAGAGCCTGTTGACATTGTAAACCTGAATCCAATCCATAAACCAAAAGCCCAGGCTTAGAATCACATTGTGGTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS CCA 72 bp CCAAGTCACTCTGCAGGAGGAAGCTCCATAGCACATTaGAAGCTACAAACATCAGATCTGATTTGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: PSHSAGGSSIAH*KLQTSDLICSV
Trigger: TACAGAGCAAATCAGATCTGATGTTTGTAGCTTCCAATGTGCTATGGAGCTTCCTCCTGCAGAGTGACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547746.1
ENST00000547772.1
ENST00000550205.1
CDS TCA 72 bp TCTTCTAAGTCTCCTAAGTCTTTTCTGGGTAGAATATaGGCAAACCATGAAAAGGGCAACCGAGGTCGTCCA +
Preference number: 6 (lower is better)
Translates to: SSKSPKSFLGRI*ANHEKGNRGRP
Trigger: TGGACGACCTCGGTTGCCCTTTTCATGGTTTGCTCATATTCTACCCAGAAAAGACTTAGGAGACTTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547746.1
ENST00000547772.1
CDS CAA 72 bp CCAAACACCCAACAGAAGACAAATGGTCAGGCTTCCTaGTCAAACATTTTGAATCAGGGACTCCACCAAACA +
Preference number: 6 (lower is better)
Translates to: PNTQQKTNGQAS*SNILNQGLHQT
Trigger: TGTTTGGTGGAGTCCCTGATTCAAAATGTTTGACAAGGAAGCCTGACCATTTGTCTTCTGTTGGGTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS CAA 72 bp CAATGTGATTCTAAGCCTGGGCTTTTGGTTTATGGATaGGATTCAGGTTTACAATGTCAACAGGCTCTTGGG +
Preference number: 6 (lower is better)
Translates to: QCDSKPGLLVYG*DSGLQCQQALG
Trigger: CCCAAGAGCCTGTTGACATTGTAAACCTGAATCCAATCCATAAACCAAAAGCCCAGGCTTAGAATCACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1
CDS CCA 72 bp AATGTGATTCTAAGCCTGGGCTTTTGGTTTATGGATTaGATTCAGGTTTACAATGTCAACAGGCTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: NVILSLGFWFMD*IQVYNVNRLLG
Trigger: TCCCAAGAGCCTGTTGACATTGTAAACCTGAATCCAATCCATAAACCAAAAGCCCAGGCTTAGAATCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536957.5
ENST00000543331.1