RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PXMP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000101417

Ensembl transcript IDs: ENST00000217398.3, ENST00000344022.7, ENST00000409299.8

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCAGAGACAGTCGGTAGCGGAGTTGGCCAACCCCCAGCAGCAGTaGCGGGACTTCAGGAGGGCAGGCGGCCAAGGTTTCACCTTCAGC +
Preference number: 1 (lower is better)
Translates to: EQRQSVAELANPQQQ*RDFRRAGGQGFTFS
Trigger: GCTGAAGGTGAAACCTTGGCCGCCTGCCCTCCTGAAGTCCCGCCACTGCTGCTGGGGGTTGGCCAACTCCGCTACCGACTGTCTCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR TCA 90 bp GGTGATACTCAAAGAGCCACAGCACCAGCCCCCACACCACCGCAGTaGGCAGCGGGAACGGGTCCCACCTGGGTTCAGGGATGTAGCCCT +
Preference number: 1 (lower is better)
Translates to: GDTQRATAPAPTPPQ*AAGTGPTWVQGCSP
Trigger: AGGGCTACATCCCTGAACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCGGTGGTGTGGGGGCTGGTGCTGTGGCTCTTTGAGTATCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR CCA 90 bp TGGCGGGACTTCAGGAGGGCAGGCGGCCAAGGTTTCACCTTCAGCTaGGGGCAGGACAGGCTAAAAGCAGGGTGTGCTCAGTCCTCAGGG +
Preference number: 1 (lower is better)
Translates to: WRDFRRAGGQGFTFS*GQDRLKAGCAQSSG
Trigger: CCCTGAGGACTGAGCACACCCTGCTTTTAGCCTGTCCTGCCCCCAGCTGAAGGTGAAACCTTGGCCGCCTGCCCTCCTGAAGTCCCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR TCA 90 bp CACCGGAAAGAGACCTCAGGGCCCTCCTCTGAGCTCCTTGACCCCTaGGGCCTAGAGAGTAGTGTGGCTGGCCCCAGTCTCACAGAAGTC +
Preference number: 1 (lower is better)
Translates to: HRKETSGPSSELLDP*GLESSVAGPSLTEV
Trigger: GACTTCTGTGAGACTGGGGCCAGCCACACTACTCTCTAGGCCTCAGGGGTCAAGGAGCTCAGAGGAGGGCCCTGAGGTCTCTTTCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
3UTR GCA 90 bp GCTGCGTGGCCTGGTTCCGAACAGGCCATGGACCGGTACCGGGGTTaGGGACCCCTTACTCTAGAGCTCATTCAACCTCCACAGCAAGTT +
Preference number: 1 (lower is better)
Translates to: AAWPGSEQAMDRYRG*GPLTLELIQPPQQV
Trigger: AACTTGCTGTGGAGGTTGAATGAGCTCTAGAGTAAGGGGTCCGCAACCCCGGTACCGGTCCATGGCCTGTTCGGAACCAGGCCACGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 90 bp AGATCTGCTGGAAGGCAGAGCCCTGCTCCCCGGCACAGACCACACTaGCTTCCTCCCTGGAGTGTGCAGTTGGAAGCACCAGATGCTCTA +
Preference number: 1 (lower is better)
Translates to: RSAGRQSPAPRHRPH*LPPWSVQLEAPDAL
Trigger: TAGAGCATCTGGTGCTTCCAACTGCACACTCCAGGGAGGAAGGCAGTGTGGTCTGTGCCGGGGAGCAGGGCTCTGCCTTCCAGCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 90 bp GCTCCATATCATTCCCCACCCCCTTGTTACTCAGAGCAGCACCACTaGCAGCACCAGGGAGCCTGGGAGAAATGCAGACTCTCAGGCCCC +
Preference number: 1 (lower is better)
Translates to: APYHSPPPCYSEQHH*QHQGAWEKCRLSGP
Trigger: GGGGCCTGAGAGTCTGCATTTCTCCCAGGCTCCCTGGTGCTGCCAGTGGTGCTGCTCTGAGTAACAAGGGGGTGGGGAATGATATGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 90 bp GAAATAGAGGCACAGAATGGCTCAGTCACTTGCCCAAGGAAACTGTaGGGCCAGGGCTTGAGCCCAGGCACTCTGGCTCCAAAGCCTATG +
Preference number: 1 (lower is better)
Translates to: EIEAQNGSVTCPRKL*GQGLSPGTLAPKPM
Trigger: CATAGGCTTTGGAGCCAGAGTGCCTGGGCTCAAGCCCTGGCCCCACAGTTTCCTTGGGCAAGTGACTGAGCCATTCTGTGCCTCTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 90 bp TCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTaGATGGGGCCAAATCTTGAGCCACAGCCAGACACCTCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: SEAYDLEKAVSFGRV*MGPNLEPQPDTSGL
Trigger: CAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR GCA 90 bp GCGGGCTGTGGGAGTGGGGGTATTTATCAGTCATTGGTTGAAGGTTaGTCCAAGGATGTGTTCATTCTCCAGCCCTTCAGGCCTGCCAGA +
Preference number: 1 (lower is better)
Translates to: AGCGSGGIYQSLVEG*SKDVFILQPFRPAR
Trigger: TCTGGCAGGCCTGAAGGGCTGGAGAATGAACACATCCTTGGAGCAACCTTCAACCAATGACTGATAAATACCCCCACTCCCACAGCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 90 bp ACCACACTGCCTTCCTCCCTGGAGTGTGCAGTTGGAAGCACCAGATaGTCTAGCAGCATCCAGAGAGATGCCATCTGTGAGGGAAACCTA +
Preference number: 1 (lower is better)
Translates to: TTLPSSLECAVGSTR*SSSIQRDAICEGNL
Trigger: TAGGTTTCCCTCACAGATGGCATCTCTCTGGATGCTGCTAGAGCATCTGGTGCTTCCAACTGCACACTCCAGGGAGGAAGGCAGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 90 bp GGCACTCTGGCTCCAAAGCCTATGTCCCTGACCACCATGCTATATTaGCTCTCAACCTGCTGTACAGAGGCCAGTTTTAGTTTGGGTTCC +
Preference number: 1 (lower is better)
Translates to: GTLAPKPMSLTTMLY*LSTCCTEASFSLGS
Trigger: GGAACCCAAACTAAAACTGGCCTCTGTACAGCAGGTTGAGAGGCAATATAGCATGGTGGTCAGGGACATAGGCTTTGGAGCCAGAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 90 bp GGCCAAATCTTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTaGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTGAGATGTCGT +
Preference number: 1 (lower is better)
Translates to: GQILSHSQTPQGCIN*RDGSCYRRGSLRCR
Trigger: ACGACATCTCAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR GCA 90 bp TCCACTAGAATAATCTGTGAGGATACAAGTGTTCCATATCTGTGTTaGCCGTCACAGCAGCCACTAGCCACATGTGGCTACTGGGTCCTG +
Preference number: 1 (lower is better)
Translates to: STRIICEDTSVPYLC*PSQQPLATCGYWVL
Trigger: CAGGACCCAGTAGCCACATGTGGCTAGTGGCTGCTGTGACGGGCAACACAGATATGGAACACTTGTATCCTCACAGATTATTCTAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR TCA 90 bp GCTGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTaGGATGTCGTGCCATACATTGCTGTCCTCATAGAGGTAGGTCAT +
Preference number: 1 (lower is better)
Translates to: AALIGGTALVIDEEV*DVVPYIAVLIEVGH
Trigger: ATGACCTACCTCTATGAGGACAGCAATGTATGGCACGACATCTCAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR CCA 90 bp CCCATCACTCCTCATCGCATAGCACTATGTCATTGTAGGCCCCTATaGGCATTTGAATGTGTACCCCTTTCTGGCCCATATCCTATAATG +
Preference number: 1 (lower is better)
Translates to: PITPHRIALCHCRPL*AFECVPLSGPYPIM
Trigger: CATTATAGGATATGGGCCAGAAAGGGGTACACATTCAAATGCCCATAGGGGCCTACAATGACATAGTGCTATGCGATGAGGAGTGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 90 bp TCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTaGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGA +
Preference number: 1 (lower is better)
Translates to: SVFLLQQTEPWDNTS*SLRPMILRRQYPLG
Trigger: TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR CCA 90 bp AGTGATGGAGTAAGTATATTAATGAAAGTGTATCTACCAGACCAATaGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTT +
Preference number: 1 (lower is better)
Translates to: SDGVSILMKVYLPDQ*SQIGSPWTRFSWRL
Trigger: AAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTCTGGTAGATACACTTTCATTAATATACTTACTCCATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 90 bp ACACTTCCTCTACATTTGGATGCTCTTAGAAATAACAGCATTTATTaGGGACTCACTTTAACTGTGTCATATTCTTTAACCCTCCACACC +
Preference number: 1 (lower is better)
Translates to: TLPLHLDALRNNSIY*GLTLTVSYSLTLHT
Trigger: GGTGTGGAGGGTTAAAGAATATGACACAGTTAAAGTGAGTCCCCAATAAATGCTGTTATTTCTAAGAGCATCCAAATGTAGAGGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR-3UTR TCA 90 bp CTGCAGCGAGGGCTGCAGGGTGGATCGGTGATACTCAAAGAGCCACAGCACCAGCCCACACCACCGCAGTaGGCAGCGGGAACGGGTCCC +
Preference number: 2 (lower is better)
Translates to: LQRGLQGGSVILKEPQHQPTPPQ*AAGTGP
Trigger: GGGACCCGTTCCCGCTGCTCACTGCGGTGGTGTGGG...CTGGTGCTGTGGCTCTTTGAGTATCACCGATCCACCCTGCAGCCCTCGCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR TCA 90 bp GAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCACCCACACCACCGCAGTaGGCAGCGGGAACGGGTCCC +
Preference number: 2 (lower is better)
Translates to: EAYDLEKAVSFGRVCMGPPTPPQ*AAGTGP
Trigger: GGGACCCGTTCCCGCTGCTCACTGCGGTGGTGTGGG...TGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR CCA 90 bp CAGCACCACTGGCAGCACCAGGGAGCCTGGGAGAAATGCAGACTCTCAGGCCCCCCCAAGGTTACACAGTaGGGGAGTGGGGACTCAAAC +
Preference number: 2 (lower is better)
Translates to: QHHWQHQGAWEKCRLSGPPKVTQ*GSGDSN
Trigger: GTTTGAGTCCCCACTCCCCCACTGTGTAACCTTGGG...GGGGCCTGAGAGTCTGCATTTCTCCCAGGCTCCCTGGTGCTGCCAGTGGTGCTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 90 bp TGCTGCGTGGCCTGGTTCCGAACAGGCCATGGACCGGTACCGGGGTaGCGGACCCCTTACTCTAGAGCTCATTCAACCTCCACAGCAAGT +
Preference number: 2 (lower is better)
Translates to: CCVAWFRTGHGPVPG*RTPYSRAHSTSTAS
Trigger: ACTTGCTGTGGAGGTTGAATGAGCTCTAGAGTAAGGGGTCCGCAACCCCGGTACCGGTCCATGGCCTGTTCGGAACCAGGCCACGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 90 bp CAGAATGGCTCAGTCACTTGCCCAAGGAAACTGTGGGGCCAGGGCTaGAGCCCAGGCACTCTGGCTCCAAAGCCTATGTCCCTGACCACC +
Preference number: 2 (lower is better)
Translates to: QNGSVTCPRKLWGQG*SPGTLAPKPMSLTT
Trigger: GGTGGTCAGGGACATAGGCTTTGGAGCCAGAGTGCCTGGGCTCAAGCCCTGGCCCCACAGTTTCCTTGGGCAAGTGACTGAGCCATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 90 bp GCTCCCCGGCACAGACCACACTGCCTTCCTCCCTGGAGTGTGCAGTaGGAAGCACCAGATGCTCTAGCAGCATCCAGAGAGATGCCATCT +
Preference number: 2 (lower is better)
Translates to: APRHRPHCLPPWSVQ*EAPDALAASREMPS
Trigger: AGATGGCATCTCTCTGGATGCTGCTAGAGCATCTGGTGCTTCCAACTGCACACTCCAGGGAGGAAGGCAGTGTGGTCTGTGCCGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR-3UTR CCA 90 bp TTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTGGAACGGGTCCCACCTaGGTTCAGGGATGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: LSHSQTPQGCINWRDGSCGTGPT*VQGCSP
Trigger: AGGGCTACATCCCTGAACCCAGGTGGGACCCGTTCC...ACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATCCTTTGGGAGGGTCTaGATGGGGCCAAATCTTGAG +
Preference number: 2 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRSFGRV*MGPNLE
Trigger: CTCAAGATTTGGCCCCATGCAGACCCTCCCAAAGGA...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
3UTR-3UTR CCA 90 bp CTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCATAGAGGTAGGTCATaGAGGACTGCAGCGAGGGCT +
Preference number: 2 (lower is better)
Translates to: LAPVSQKSAAQLEPSRRFHRGRS*RTAARA
Trigger: AGCCCTCGCTGCAGTCCTCCATGACCTACCTCTATG...GAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344022.7
3UTR-3UTR CCA 90 bp CAGCACCACTGGCAGCACCAGGGAGCCTGGGAGAAATGCAGACTCTCAGGCCCCCTAGCTGTATTACCTTaGGCAAGTTACTCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: QHHWQHQGAWEKCRLSGPLAVLP*ASYSPL
Trigger: GAGAGGAGAGTAACTTGCCCAAGGTAATACAGCTAG...GGGGCCTGAGAGTCTGCATTTCTCCCAGGCTCCCTGGTGCTGCCAGTGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 90 bp TCAGATGGGATAATAATGGACGGCTCCATATCATTCCCCACCCCCTaGTTACTCAGAGCAGCACCACTGGCAGCACCAGGGAGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: SDGIIMDGSISFPTP*LLRAAPLAAPGSLG
Trigger: TCCCAGGCTCCCTGGTGCTGCCAGTGGTGCTGCTCTGAGTAACAAGGGGGTGGGGAATGATATGGAGCCGTCCATTATTATCCCATCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR-3UTR CCA 90 bp AGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGAACGGGTCCCACCTaGGTTCAGGGATGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: SLRPMILRRQYPLGGSAWGTGPT*VQGCSP
Trigger: AGGGCTACATCCCTGAACCCAGGTGGGACCCGTTCC...CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR CAA 90 bp GGGGTGAGGGATGCGGGCTGTGGGAGTGGGGGTATTTATCAGTCATaGGTTGAAGGTTGCTCCAAGGATGTGTTCATTCTCCAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: GVRDAGCGSGGIYQS*VEGCSKDVFILQPF
Trigger: GAAGGGCTGGAGAATGAACACATCCTTGGAGCAACCTTCAACCAATGACTGATAAATACCCCCACTCCCACAGCCCGCATCCCTCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 90 bp ACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTaGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATC +
Preference number: 2 (lower is better)
Translates to: TEPWDNTSWSLRPMI*RRQYPLGGSAWGQI
Trigger: GATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR-3UTR GCA 90 bp AGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGCAGACACCTCAGGGCTaGATTAATTGGAGGGACGGC +
Preference number: 2 (lower is better)
Translates to: SLRPMILRRQYPLGGSAWQTPQG*INWRDG
Trigger: GCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTG...CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR CCA 90 bp CAGCACCACTGGCAGCACCAGGGAGCCTGGGAGAAATGCAGACTCTCAGGCCCCTCTACATCTGTAAAATaGGGACGAAAACACACATTT +
Preference number: 2 (lower is better)
Translates to: QHHWQHQGAWEKCRLSGPSTSVK*GRKHTF
Trigger: AAATGTGTGTTTTCGTCCCCATTTTACAGATGTAGA...GGGGCCTGAGAGTCTGCATTTCTCCCAGGCTCCCTGGTGCTGCCAGTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR-3UTR TCA 90 bp TTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTATAGACGAGGAAGTCTaGGATGTCGTGCCATACATT +
Preference number: 2 (lower is better)
Translates to: LSHSQTPQGCINWRDGSCIDEEV*DVVPYI
Trigger: AATGTATGGCACGACATCTCAGACTTCCTCGTCTAT...ACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR GCA 90 bp CAAATCTTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTGGAGGGACGGCAAGTCTGAGATGTCGTaGCATACATTGCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: QILSHSQTPQGCINWRDGKSEMS*HTLLSS
Trigger: TGAGGACAGCAATGTATGGCACGACATCTCAGACTT...GCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR CCA 90 bp GTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGGCGAGGGCTGCAGGGTaGATCGGTGATACTCAAAGA +
Preference number: 2 (lower is better)
Translates to: VFLLQQTEPWDNTSWSLRARAAG*IGDTQR
Trigger: TCTTTGAGTATCACCGATCCACCCTGCAGCCCTCGC...CCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR CCA 90 bp TTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTGCGAGGGCTGCAGGGTaGATCGGTGATACTCAAAGA +
Preference number: 2 (lower is better)
Translates to: FLLQQTEPWDNTSWSLRPARAAG*IGDTQR
Trigger: TCTTTGAGTATCACCGATCCACCCTGCAGCCCTCGC...AGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR GCA 90 bp TTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTTCCTTTGGGAGGGTCTaGATGGGGCCAAATCTTGAG +
Preference number: 2 (lower is better)
Translates to: FLLQQTEPWDNTSWSLRPSFGRV*MGPNLE
Trigger: CTCAAGATTTGGCCCCATGCAGACCCTCCCAAAGGA...AGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR-3UTR GCA 90 bp CAGGAACTAGCATTTAGGAAGCATAGCACTTACTGTGCAACAAGAGCCCTCTGGAGCTGGAATTACAGGTaGCTGCCACCATGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: QELAFRKHSTYCATRALWSWNYR*LPPCPA
Trigger: AGCTGGACATGGTGGCAGGCACCTGTAATTCCAGCT...CCAGAGGGCTCTTGTTGCACAGTAAGTGCTATGCTTCCTAAATGCTAGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR-3UTR TCA 90 bp TTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATAGACGAGGAAGTCTaGGATGTCGTGCCATACATT +
Preference number: 2 (lower is better)
Translates to: LLQQTEPWDNTSWSLRPMIDEEV*DVVPYI
Trigger: AATGTATGGCACGACATCTCAGACTTCCTCGTCTAT...CATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR GCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTAAGTCTGAGATGTCGTaGCATACATTGCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSKSEMS*HTLLSS
Trigger: TGAGGACAGCAATGTATGGCACGACATCTCAGACTT...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR CCA 90 bp AACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGACAGGGCTGCATTAATTaGAGGGACGGCTCTTGTTAT +
Preference number: 2 (lower is better)
Translates to: NTSWSLRPMILRRQYPLGQGCIN*RDGSCY
Trigger: ATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTG...TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR CCA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTTTGGGAGGGTCTGCATaGGGCCAAATCTTGAGCCAC +
Preference number: 2 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSLGGSA*GQILSH
Trigger: GTGGCTCAAGATTTGGCCCCATGCAGACCCTCCCAA...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR CAA 90 bp ATCAGACTGATCCCACCTCAATTACCTAAGGGCTCTGTGACTCATTaGTCAGATGGGATAATAATGGACGGCTCCATATCATTCCCCACC +
Preference number: 2 (lower is better)
Translates to: IRLIPPQLPKGSVTH*SDGIIMDGSISFPT
Trigger: GGTGGGGAATGATATGGAGCCGTCCATTATTATCCCATCTGACAAATGAGTCACAGAGCCCTTAGGTAATTGAGGTGGGATCAGTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR-3UTR CCA 90 bp CAGGAACTAGCATTTAGGAAGCATAGCACTTACTGTGCAACAAGAGCCCTCTGGAATAACAGCATTTATTaGGGACTCACTTTAACTGTG +
Preference number: 2 (lower is better)
Translates to: QELAFRKHSTYCATRALWNNSIY*GLTLTV
Trigger: CACAGTTAAAGTGAGTCCCCAATAAATGCTGTTATT...CCAGAGGGCTCTTGTTGCACAGTAAGTGCTATGCTTCCTAAATGCTAGTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 72 bp GGAAGGCAGAGCCCTGCTCCCCGGCACAGACCACACTaGCTTCCTCCCTGGAGTGTGCAGTTGGAAGCACCA +
Preference number: 3 (lower is better)
Translates to: GRQSPAPRHRPH*LPPWSVQLEAP
Trigger: TGGTGCTTCCAACTGCACACTCCAGGGAGGAAGGCAGTGTGGTCTGTGCCGGGGAGCAGGGCTCTGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp TACTCAGAGCAGCACCACTGGCAGCACCAGGGAGCCTaGGAGAAATGCAGACTCTCAGGCCCCACCCCAGCT +
Preference number: 3 (lower is better)
Translates to: YSEQHHWQHQGA*EKCRLSGPTPA
Trigger: AGCTGGGGTGGGGCCTGAGAGTCTGCATTTCTCCCAGGCTCCCTGGTGCTGCCAGTGGTGCTGCTCTGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp GCACAGAATGGCTCAGTCACTTGCCCAAGGAAACTGTaGGGCCAGGGCTTGAGCCCAGGCACTCTGGCTCCA +
Preference number: 3 (lower is better)
Translates to: AQNGSVTCPRKL*GQGLSPGTLAP
Trigger: TGGAGCCAGAGTGCCTGGGCTCAAGCCCTGGCCCCACAGTTTCCTTGGGCAAGTGACTGAGCCATTCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 72 bp CCTGGTTCCGAACAGGCCATGGACCGGTACCGGGGTTaGGGACCCCTTACTCTAGAGCTCATTCAACCTCCA +
Preference number: 3 (lower is better)
Translates to: PGSEQAMDRYRG*GPLTLELIQPP
Trigger: TGGAGGTTGAATGAGCTCTAGAGTAAGGGGTCCGCAACCCCGGTACCGGTCCATGGCCTGTTCGGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp CATTCCCCACCCCCTTGTTACTCAGAGCAGCACCACTaGCAGCACCAGGGAGCCTGGGAGAAATGCAGACTC +
Preference number: 3 (lower is better)
Translates to: HSPPPCYSEQHH*QHQGAWEKCRL
Trigger: GAGTCTGCATTTCTCCCAGGCTCCCTGGTGCTGCCAGTGGTGCTGCTCTGAGTAACAAGGGGGTGGGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 72 bp CCTTCCTCCCTGGAGTGTGCAGTTGGAAGCACCAGATaGTCTAGCAGCATCCAGAGAGATGCCATCTGTGAG +
Preference number: 3 (lower is better)
Translates to: PSSLECAVGSTR*SSSIQRDAICE
Trigger: CTCACAGATGGCATCTCTCTGGATGCTGCTAGAGCATCTGGTGCTTCCAACTGCACACTCCAGGGAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 72 bp AATGAGGAAATAGAGGCACAGAATGGCTCAGTCACTTaGCCAAGGAAACTGTGGGGCCAGGGCTTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: NEEIEAQNGSVT*PRKLWGQGLSP
Trigger: TGGGCTCAAGCCCTGGCCCCACAGTTTCCTTGGGCAAGTGACTGAGCCATTCTGTGCCTCTATTTCCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp TGCCCGTCACAGCAGCCACTAGCCACATGTGGCTACTaGGTCCTGAAAATGTGGGTGGCAAAATATACACCC +
Preference number: 3 (lower is better)
Translates to: CPSQQPLATCGY*VLKMWVAKYTP
Trigger: GGGTGTATATTTTGCCACCCACATTTTCAGGACCCAGTAGCCACATGTGGCTAGTGGCTGCTGTGACGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp GTCCAGAACCTTCCCCAAGGTTACACAGTGGGGGAGTaGGGACTCAAACCCATGTCCTCTAGCTCTAGATCT +
Preference number: 3 (lower is better)
Translates to: VQNLPQGYTVGE*GLKPMSSSSRS
Trigger: AGATCTAGAGCTAGAGGACATGGGTTTGAGTCCCCACTCCCCCACTGTGTAACCTTGGGGAAGGTTCTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR TCA 72 bp AGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTaGGCCACAGCCAGACACCTCAGGGCTGCATTAATT +
Preference number: 3 (lower is better)
Translates to: SILWEGLHGAKS*ATARHLRAALI
Trigger: AATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR GCA 72 bp GGCCAAATCTTGAGCCACAGCCAGACACCTCAGGGCTaGATTAATTGGAGGGACGGCTCTTGTTATAGACGA +
Preference number: 3 (lower is better)
Translates to: GQILSHSQTPQG*INWRDGSCYRR
Trigger: TCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR GCA 72 bp TATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTaGATGGGGCCAAATCTTGAGCCACAGCCAGACACC +
Preference number: 3 (lower is better)
Translates to: YDLEKAVSFGRV*MGPNLEPQPDT
Trigger: GGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR CCA 72 bp TTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTaGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTG +
Preference number: 3 (lower is better)
Translates to: LSHSQTPQGCIN*RDGSCYRRGSL
Trigger: CAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR-3UTR CAA 90 bp TTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTGCATGGGGCCAAATCTaGAGCCACAGCCAGACACCT +
Preference number: 3 (lower is better)
Translates to: FLLQQTEPWDNTSWSLRPAWGQI*SHSQTP
Trigger: AGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGC...AGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR-3UTR CAA 90 bp ATTGAGGCTCTGAGAGGTCCAGAACCTTCCCCAAGGTTACACAGTGGGGGAGTGGCTCACGTGTTTCTATaGGACAGTGGGAATCTAGAA +
Preference number: 3 (lower is better)
Translates to: IEALRGPEPSPRLHSGGVAHVFL*DSGNLE
Trigger: TTCTAGATTCCCACTGTCCAATAGAAACACGTGAGC...CACTCCCCCACTGTGTAACCTTGGGGAAGGTTCTGGACCTCTCAGAGCCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR TCA 72 bp CAAGGAGCCCTCTGTGACATAAGAACAGTTGAAGAATaGACATACCCACCGGAAAGAGACCTCAGGGCCCTC +
Preference number: 3 (lower is better)
Translates to: QGALCDIRTVEE*TYPPERDLRAL
Trigger: GAGGGCCCTGAGGTCTCTTTCCGGTGGGTATGTTCATTCTTCAACTGTTCTTATGTCACAGAGGGCTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
3UTR GCA 72 bp ATGTCCCTGACCACCATGCTATATTGCCTCTCAACCTaGTGTACAGAGGCCAGTTTTAGTTTGGGTTCCCCC +
Preference number: 3 (lower is better)
Translates to: MSLTTMLYCLST*CTEASFSLGSP
Trigger: GGGGGAACCCAAACTAAAACTGGCCTCTGTACAGCAGGTTGAGAGGCAATATAGCATGGTGGTCAGGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp ACTCTAAGACAAGGGTTTGAGTGCAAGTGGTTCATATaGGAAGTGGTCCCAGGAAGCACTGGTAGGGGCATG +
Preference number: 3 (lower is better)
Translates to: TLRQGFECKWFI*EVVPGSTGRGM
Trigger: CATGCCCCTACCAGTGCTTCCTGGGACCACTTCCCATATGAACCACTTGCACTCAAACCCTTGTCTTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 72 bp GCTCCAAAGCCTATGTCCCTGACCACCATGCTATATTaGCTCTCAACCTGCTGTACAGAGGCCAGTTTTAGT +
Preference number: 3 (lower is better)
Translates to: APKPMSLTTMLY*LSTCCTEASFS
Trigger: ACTAAAACTGGCCTCTGTACAGCAGGTTGAGAGGCAATATAGCATGGTGGTCAGGGACATAGGCTTTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp ATGCGGGCTGTGGGAGTGGGGGTATTTATCAGTCATTaGTTGAAGGTTGCTCCAAGGATGTGTTCATTCTCC +
Preference number: 3 (lower is better)
Translates to: MRAVGVGVFISH*LKVAPRMCSFS
Trigger: GGAGAATGAACACATCCTTGGAGCAACCTTCAACCAATGACTGATAAATACCCCCACTCCCACAGCCCGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp GCCTCTCAACCTGCTGTACAGAGGCCAGTTTTAGTTTaGGTTCCCCCAATAGCAGACTCTAAGACAAGGGTT +
Preference number: 3 (lower is better)
Translates to: ASQPAVQRPVLV*VPPIADSKTRV
Trigger: AACCCTTGTCTTAGAGTCTGCTATTGGGGGAACCCAAACTAAAACTGGCCTCTGTACAGCAGGTTGAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR-3UTR CAA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTGCATGGGGCCAAATCTaGAGCCACAGCCAGACACCT +
Preference number: 3 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSAWGQI*SHSQTP
Trigger: AGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGC...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR TCA 72 bp ATTGGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTaGGATGTCGTGCCATACATTGCTGTCCTCATAGAG +
Preference number: 3 (lower is better)
Translates to: IGGTALVIDEEV*DVVPYIAVLIE
Trigger: CTCTATGAGGACAGCAATGTATGGCACGACATCTCAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR GCA 72 bp TATAGACGAGGAAGTCTGAGATGTCGTGCCATACATTaGTGTCCTCATAGAGGTAGGTCATGGAGGACTGCA +
Preference number: 3 (lower is better)
Translates to: YRRGSLRCRAIH*CPHRGRSWRTA
Trigger: TGCAGTCCTCCATGACCTACCTCTATGAGGACAGCAATGTATGGCACGACATCTCAGACTTCCTCGTCTATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
3UTR GCA 72 bp ATAATCTGTGAGGATACAAGTGTTCCATATCTGTGTTaGCCGTCACAGCAGCCACTAGCCACATGTGGCTAC +
Preference number: 3 (lower is better)
Translates to: IICEDTSVPYLC*PSQQPLATCGY
Trigger: GTAGCCACATGTGGCTAGTGGCTGCTGTGACGGGCAACACAGATATGGAACACTTGTATCCTCACAGATTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp CCTCATCGCATAGCACTATGTCATTGTAGGCCCCTATaGGCATTTGAATGTGTACCCCTTTCTGGCCCATAT +
Preference number: 3 (lower is better)
Translates to: PHRIALCHCRPL*AFECVPLSGPY
Trigger: ATATGGGCCAGAAAGGGGTACACATTCAAATGCCCATAGGGGCCTACAATGACATAGTGCTATGCGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR GCA 72 bp ATTCTCATAAGGAGCATGCAACCTAGATCCCTTGCATaGGCAGTTCACAATAGGGTTTGCATTCCTACGAGC +
Preference number: 3 (lower is better)
Translates to: ILIRSMQPRSLA*AVHNRVCIPTS
Trigger: GCTCGTAGGAATGCAAACCCTATTGTGAACTGCGCATGCAAGGGATCTAGGTTGCATGCTCCTTATGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp TTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTaGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTAT +
Preference number: 3 (lower is better)
Translates to: LLQQTEPWDNTS*SLRPMILRRQY
Trigger: ATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR-3UTR CAA 90 bp GACCAATGGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTTGTTGACGAAAACACACATTaGCAAGGCCACTGTATGGTT +
Preference number: 3 (lower is better)
Translates to: DQWSQIGSPWTRFSWRLVDENTH*QGHCMV
Trigger: AACCATACAGTGGCCTTGCAAATGTGTGTTTTCGTC...AACAAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp TGTGCTCAGTCCTCAGGGGCACACTTCCTCTACATTTaGATGCTCTTAGAAATAACAGCATTTATTGGGGAC +
Preference number: 3 (lower is better)
Translates to: CAQSSGAHFLYI*MLLEITAFIGD
Trigger: GTCCCCAATAAATGCTGTTATTTCTAAGAGCATCCAAATGTAGAGGAAGTGTGCCCCTGAGGACTGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp TTAAAATCAGTGTTTTTACTTCAGCAAACGGAACCCTaGGATAACACCAGTTGGAGTCTGAGGCCTATGATC +
Preference number: 3 (lower is better)
Translates to: LKSVFLLQQTEP*DNTSWSLRPMI
Trigger: GATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
3UTR TCA 72 bp ATTAGTAGCACATCAGTGGTAGTTGCACAAGTCCAGTaGGGACCACGGCATTATGATTATCCTCATTTTATG +
Preference number: 3 (lower is better)
Translates to: ISSTSVVVAQVQ*GPRHYDYPHFM
Trigger: CATAAAATGAGGATAATCATAATGCCGTGGTCCTCACTGGACTTGTGCAACTACCACTGATGTGCTACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CCA 72 bp GTAAGTATATTAATGAAAGTGTATCTACCAGACCAATaGTCTCAAATTGGTAGCCCATGGACCAGATTTTCC +
Preference number: 3 (lower is better)
Translates to: VSILMKVYLPDQ*SQIGSPWTRFS
Trigger: GGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTCTGGTAGATACACTTTCATTAATATACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp CGCAGTGAGCAGCGGGAACGGGTCCCACCTGGGTTCAGGGATGTAGCCCTTCTCTGCGCAGCAGTGCGTTaGCGACTACGAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RSEQRERVPPGFRDVALLCAAVR*RLRAEP
Trigger: GGGCTCTGCTCGTAGTCGTCAACGCACTGCTGCGCA...GAGAAGGGCTACATCCCTGAACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR TCA 90 bp CTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCCCACACCACCGCAGTaGGCAGCGGGAACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LAPVSQKSAAQLEPSRRFPTPPQ*AAGTGP
Trigger: GGGACCCGTTCCCGCTGCTCACTGCGGTGGTGTGGG...GAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR TCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGAATCCCACCCGAGGGGTaGGGGATGCGGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRIPPEG*GMRAVG
Trigger: TCCCACAGCCCGCATCCCTCACCCCTCGGGTGGGAT...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp CACCACCGCAGTGAGCAGCGGGAACGGGTCCCACCTGGGTTCAGGGATGTAGCCGAAGGCCGCCAGGAATaGGTGTGCTGGGTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HHRSEQRERVPPGFRDVAEGRQE*VCWVGL
Trigger: AAGACCTACCCAGCACACGCATTCCTGGCGGCCTTC...GGCTACATCCCTGAACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR CCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGACCTGCTGGGCGGCCCTaGGAGTCAGTGTGGAGCACG +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRPAGRP*ESVWST
Trigger: CGTGCTCCACACTGACTCCCAGGGCCGCCCAGCAGG...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTTGAGGCTCAGCCCTaGTGGGCGGCCCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRFEAQP*WAALGV
Trigger: GACTCCCAGGGCCGCCCAGCAGGGCTGAGCCTCAAA...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GGGCTGCAGGGTGGATCGGTGATACTCAAAGAGCCACAGCACCAGCCCCCACACGGAACGGGTCCCACCTaGGTTCAGGGATGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLQGGSVILKEPQHQPPHGTGPT*VQGCSP
Trigger: AGGGCTACATCCCTGAACCCAGGTGGGACCCGTTCC...GTGTGGGGGCTGGTGCTGTGGCTCTTTGAGTATCACCGATCCACCCTGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGAAGCAGAGCCCTTAGCTaGGGCGGGGCTGCCATAGTG +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRSRALS*GGAAIV
Trigger: CACTATGGCAGCCCCGCCGCAGCTAAGGGCTCTGCT...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp GGGCTGCAGGGTGGATCGGTGATACTCAAAGAGCCACAGCACCAGCCCCCACACCGCCAGGAATGCGTGTaGTGGGTAGGTCTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GLQGGSVILKEPQHQPPHRQECV*WVGLAL
Trigger: CAAGGCAAGACCTACCCAGCACACGCATTCCTGGCG...GTGTGGGGGCTGGTGCTGTGGCTCTTTGAGTATCACCGATCCACCCTGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR GCA 90 bp CACCACCGCAGTGAGCAGCGGGAACGGGTCCCACCTGGGTTCAGGGATGTAGCCGTATTTACAACCCACTaGCCACCAGCAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HHRSEQRERVPPGFRDVAVFTTH*PPARSP
Trigger: AGGGCTCCTTGCTGGTGGGCAGTGGGTTGTAAATAC...GGCTACATCCCTGAACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344022.7
CDS-3UTR CCA 90 bp AGCACCAGCCCCCACACCACCGCAGTGAGCAGCGGGAACGGGTCCCACCTGGGTTGGGATAACACCAGTTaGAGTCTGAGGCCTATGATC +
Preference number: 4 (lower is better)
Translates to: STSPHTTAVSSGNGSHLGWDNTS*SLRPMI
Trigger: GATCATAGGCCTCAGACTCCAACTGGTGTTATCCCA...ACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCGGTGGTGTGGGGGCTGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR CCA 90 bp CAGCACCACTGGCAGCACCAGGGAGCCTGGGAGAAATGCAGACTCTCAGGCCCCTACACAGTGGGGGAGTaGGGACTCAAACCCATGTCC +
Preference number: 4 (lower is better)
Translates to: QHHWQHQGAWEKCRLSGPYTVGE*GLKPMS
Trigger: GGACATGGGTTTGAGTCCCCACTCCCCCACTGTGTA...GGGGCCTGAGAGTCTGCATTTCTCCCAGGCTCCCTGGTGCTGCCAGTGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 72 bp GCCTGGTTCCGAACAGGCCATGGACCGGTACCGGGGTaGCGGACCCCTTACTCTAGAGCTCATTCAACCTCC +
Preference number: 4 (lower is better)
Translates to: AWFRTGHGPVPG*RTPYSRAHSTS
Trigger: GGAGGTTGAATGAGCTCTAGAGTAAGGGGTCCGCAACCCCGGTACCGGTCCATGGCCTGTTCGGAACCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GGGCTGCAGGGTGGATCGGTGATACTCAAAGAGCCACAGCACCAGCCCCCACACGGAGACCCTTGTAGGTaGACACAAACCGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLQGGSVILKEPQHQPPHGDPCR*TQTVPG
Trigger: ACCTGGCACGGTTTGTGTTCACCTACAAGGGTCTCC...GTGTGGGGGCTGGTGCTGTGGCTCTTTGAGTATCACCGATCCACCCTGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGAGCGCTTGCGCAGCAGTaGGTTGACGACTACGAGCAG +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRALAQQ*VDDYEQ
Trigger: CTGCTCGTAGTCGTCAACGCACTGCTGCGCAAGCGC...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp GGGCTGCAGGGTGGATCGGTGATACTCAAAGAGCCACAGCACCAGCCCCCACACTTGGGAGGGTCTGCATaGGGCCAAATCTTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLQGGSVILKEPQHQPPHLGGSA*GQILSH
Trigger: GTGGCTCAAGATTTGGCCCCATGCAGACCCTCCCAA...GTGTGGGGGCTGGTGCTGTGGCTCTTTGAGTATCACCGATCCACCCTGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR CCA 90 bp CACCACCGCAGTGAGCAGCGGGAACGGGTCCCACCTGGGTTCAGGGATGTAGCCCAGCAAACGGAACCCTaGGATAACACCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: HHRSEQRERVPPGFRDVAQQTEP*DNTSWS
Trigger: ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTG...GGCTACATCCCTGAACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR TCA 90 bp GCATGGGGCCAAATCTTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTGGGTCATGACCAGCGCGTaGGGGGCCCGGATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: AWGQILSHSQTPQGCINWVMTSA*GARILA
Trigger: AGCCAAAATCCGGGCCCCTCACGCGCTGGTCATGAC...CCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR TCA 90 bp TTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGCCCACACCACCGCAGTaGGCAGCGGGAACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLQQTEPWDNTSWSLRPMPTPPQ*AAGTGP
Trigger: GGGACCCGTTCCCGCTGCTCACTGCGGTGGTGTGGG...CATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCAGCAGAGCCCTTAGCTaGGGCGGGGCTGCCATAGTG +
Preference number: 4 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSSRALS*GGAAIV
Trigger: CACTATGGCAGCCCCGCCGCAGCTAAGGGCTCTGCT...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGAGAAGGCCGCCAGGAATaGGTGTGCTGGGTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRREGRQE*VCWVGL
Trigger: AAGACCTACCCAGCACACGCATTCCTGGCGGCCTTC...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp CTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCGGAGCCTGGGAGAAATaGAGACTCTCAGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LAPVSQKSAAQLEPSRRFGAWEK*RLSGPT
Trigger: GGTGGGGCCTGAGAGTCTGCATTTCTCCCAGGCTCC...GAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGAGGCCACTGGCAAAGCTaGCTAGTGTGCACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRGHWQS*LVCTRV
Trigger: GACTCTGGTGCACACTAGCCAGCTTTGCCAGTGGCC...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GGGCTGCAGGGTGGATCGGTGATACTCAAAGAGCCACAGCACCAGCCCCCACACGGCAAACAGGACGCGTaGCAACAGGTACATGTTGAT +
Preference number: 4 (lower is better)
Translates to: GLQGGSVILKEPQHQPPHGKQDA*QQVHVD
Trigger: ATCAACATGTACCTGTTGTCACGCGTCCTGTTTGCC...GTGTGGGGGCTGGTGCTGTGGCTCTTTGAGTATCACCGATCCACCCTGCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR GCA 90 bp CGCAGTGAGCAGCGGGAACGGGTCCCACCTGGGTTCAGGGATGTAGCCCTTCTCTGTCGTGCCATACATTaGTGTCCTCATAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RSEQRERVPPGFRDVALLCRAIH*CPHRGR
Trigger: CCTACCTCTATGAGGACAGCAATGTATGGCACGACA...GAGAAGGGCTACATCCCTGAACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGACTCACAGAAGTCAGCTaGACAGCTGGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRLTEVS*TAGTKP
Trigger: CGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAG...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCGCGATCTCAGCTCACTaGAGCCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSAISAH*SLCLPG
Trigger: ACCTGGGAGGCAGAGGCTGCAGTGAGCTGAGATCGC...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGACCTTTCAACTCCTGCTaGGTGGCCTGGTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRPFNSC*VAWFRT
Trigger: TGTTCGGAACCAGGCCACGCAGCAGGAGTTGAAAGG...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCTGCCCAAGGAAACTGTaGGGCCAGGGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSCPRKL*GQGLSP
Trigger: TGGGCTCAAGCCCTGGCCCCACAGTTTCCTTGGGCA...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGAAATGGCTCAGTCACTTaGCCAAGGAAACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRNGSVT*PRKLWG
Trigger: GCCCCACAGTTTCCTTGGGCAAGTGACTGAGCCATT...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGAGCAACAAGAGCCCTCTaGCCATCCCTGTTTTACAGG +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRATRAL*PSLFYR
Trigger: CCTGTAAAACAGGGATGGCCAGAGGGCTCTTGTTGC...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 72 bp CACAGACCACACTGCCTTCCTCCCTGGAGTGTGCAGTaGGAAGCACCAGATGCTCTAGCAGCATCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HRPHCLPPWSVQ*EAPDALAASRE
Trigger: CTCTCTGGATGCTGCTAGAGCATCTGGTGCTTCCAACTGCACACTCCAGGGAGGAAGGCAGTGTGGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAATGCGCAGCAGTGCGTTaGCGACTACGAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RHLRAALIGGTALVIDEECAAVR*RLRAEP
Trigger: GGGCTCTGCTCGTAGTCGTCAACGCACTGCTGCGCA...TTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR TCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTTGCGCAGCAGTGCGTTaGCGACTACGAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSCAAVR*RLRAEP
Trigger: GGGCTCTGCTCGTAGTCGTCAACGCACTGCTGCGCA...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR TCA 90 bp AGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAAGTCATGACCAGCGCGTaGGGGGCCCGGATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RHLRAALIGGTALVIDEEVMTSA*GARILA
Trigger: AGCCAAAATCCGGGCCCCTCACGCGCTGGTCATGAC...TTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR TCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGGGAAGAGAAAGGTCATaGCCAGCGCGTGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILGRERS*PAREGP
Trigger: GGGCCCCTCACGCGCTGGTCATGACCTTTCTCTTCC...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATGGATATATGTGGCCTaGAGTATGGCCCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRWIYVA*SMAHSF
Trigger: GAAGCTGTGGGCCATACTGCAGGCCACATATATCCA...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCGCGAGGGCTGCAGGGTaGATCGGTGATACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSARAAG*IGDTQR
Trigger: TCTTTGAGTATCACCGATCCACCCTGCAGCCCTCGC...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp ATTGAGGCTCTGAGAGGTCCAGAACCTTCCCCAAGGTTACACAGTGGGGGAGTGCATAGAGGTAGGTCATaGAGGACTGCAGCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IEALRGPEPSPRLHSGGVHRGRS*RTAARA
Trigger: AGCCCTCGCTGCAGTCCTCCATGACCTACCTCTATG...CACTCCCCCACTGTGTAACCTTGGGGAAGGTTCTGGACCTCTCAGAGCCTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GCATGGGGCCAAATCTTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTGGTTGGGAGGGTCTGCATaGGGCCAAATCTTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AWGQILSHSQTPQGCINWLGGSA*GQILSH
Trigger: GTGGCTCAAGATTTGGCCCCATGCAGACCCTCCCAA...CCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR CCA 90 bp ACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGCTCTGTGGCCCAGGCTaGAGTGCAGTCGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: TSWSLRPMILRRQYPLGGLCGPG*SAVVRS
Trigger: AGATCGCACGACTGCACTCCAGCCTGGGCCACAGAG...CCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCCCACACCACCGCAGTaGGCAGCGGGAACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSPTPPQ*AAGTGP
Trigger: GGGACCCGTTCCCGCTGCTCACTGCGGTGGTGTGGG...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR TCA 90 bp GAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAGCCCCTATGGGCATTTaGATGTGTACCCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EAYDLEKAVSFGRVCMGPAPMGI*MCTPFW
Trigger: CCAGAAAGGGGTACACATTCAAATGCCCATAGGGGC...TGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCGATGGGGAGGGTGTTTaGGGCTCAGCCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIIDGEGV*GSALLG
Trigger: GCCCAGCAGGGCTGAGCCTCAAACACCCTCCCCATC...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp TTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTAGCAGAGCCCTTAGCTaGGGCGGGGCTGCCATAGTG +
Preference number: 4 (lower is better)
Translates to: FLLQQTEPWDNTSWSLRPSRALS*GGAAIV
Trigger: CACTATGGCAGCCCCGCCGCAGCTAAGGGCTCTGCT...AGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp TTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGGCGCTTGCGCAGCAGTaGGTTGACGACTACGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLQQTEPWDNTSWSLRPMALAQQ*VDDYEQ
Trigger: CTGCTCGTAGTCGTCAACGCACTGCTGCGCAAGCGC...CATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp GCCAGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGCAGACACCTCAGGGCTaGATTAATTGGAGGGACGGC +
Preference number: 4 (lower is better)
Translates to: ARHLRAALIGGTALVIDEQTPQG*INWRDG
Trigger: GCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTG...CTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR GCA 90 bp AGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGTCGCCCAGGCTGGAGTaGAGTGGCGTGATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLRPMILRRQYPLGGSAWSPRLE*SGVIFA
Trigger: AGCAAAGATCACGCCACTGCACTCCAGCCTGGGCGA...CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp ATTGAGGCTCTGAGAGGTCCAGAACCTTCCCCAAGGTTACACAGTGGGGGAGTGAGCTGGAATTACAGGTaGCTGCCACCATGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IEALRGPEPSPRLHSGGVSWNYR*LPPCPA
Trigger: AGCTGGACATGGTGGCAGGCACCTGTAATTCCAGCT...CACTCCCCCACTGTGTAACCTTGGGGAAGGTTCTGGACCTCTCAGAGCCTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp AACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGATGGAAGGCAGAGCCCTaGTCCCCGGCACAGACCACA +
Preference number: 4 (lower is better)
Translates to: NTSWSLRPMILRRQYPLGWKAEP*SPAQTT
Trigger: TGTGGTCTGTGCCGGGGAGCAGGGCTCTGCCTTCCA...TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGAGCCTCCCCAGTAGCTaGGATTACAGGGACGTGCCA +
Preference number: 4 (lower is better)
Translates to: EPWDNTSWSLRPMILRRQSLPSS*DYRDVP
Trigger: TGGCACGTCCCTGTAATCCCAGCTACTGGGGAGGCT...CTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp CAGGAACTAGCATTTAGGAAGCATAGCACTTACTGTGCAACAAGAGCCCTCTGGTCAGAGCAGCACCACTaGCAGCACCAGGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QELAFRKHSTYCATRALWSEQHH*QHQGAW
Trigger: CCAGGCTCCCTGGTGCTGCCAGTGGTGCTGCTCTGA...CCAGAGGGCTCTTGTTGCACAGTAAGTGCTATGCTTCCTAAATGCTAGTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 72 bp ATAATAATGGACGGCTCCATATCATTCCCCACCCCCTaGTTACTCAGAGCAGCACCACTGGCAGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: IIMDGSISFPTP*LLRAAPLAAPG
Trigger: CCCTGGTGCTGCCAGTGGTGCTGCTCTGAGTAACAAGGGGGTGGGGAATGATATGGAGCCGTCCATTATTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp TGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTGAGATGTCGTGGAAGAGAAAGGTCATaGCCAGCGCGTGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CINWRDGSCYRRGSLRCRGRERS*PAREGP
Trigger: GGGCCCCTCACGCGCTGGTCATGACCTTTCTCTTCC...ACGACATCTCAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR TCA 90 bp GACCAATGGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTTGTTGGAAGAGAAAGGTCATaGCCAGCGCGTGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: DQWSQIGSPWTRFSWRLVGRERS*PAREGP
Trigger: GGGCCCCTCACGCGCTGGTCATGACCTTTCTCTTCC...AACAAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp TTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGGCTCAGGTGGTAATGTaGGCAGTGGGGAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLQQTEPWDNTSWSLRPMAQVVM*AVGSGC
Trigger: ACAGCCACTCCCCACTGCTCACATTACCACCTGAGC...CATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGCAAAGGAGGCACCAGTaGCAAGCTAGAGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EPWDNTSWSLRPMILRRQQRRHQ*QARVLR
Trigger: CCTGAGGACTCTAGCTTGTCACTGGTGCCTCCTTTG...CTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp GGAAGTCTGAGATGTCGTGCCATACATTGCTGTCCTCATAGAGGTAGGTCATGGGCTTCTCCTGGAGGCTaGACAAACACAGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GSLRCRAIHCCPHRGRSWASPGG*TNTGAP
Trigger: AGGGGCACCTGTGTTTGTGCAGCCTCCAGGAGAAGC...CCATGACCTACCTCTATGAGGACAGCAATGTATGGCACGACATCTCAGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR GCA 90 bp GCATGGGGCCAAATCTTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTGGGTGCTGGGTAGGTCTTaGCTTGTATGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: AWGQILSHSQTPQGCINWVLGRS*LVCRTA
Trigger: TGCAGTCCTACATACAAGGCAAGACCTACCCAGCAC...CCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR GCA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCGTGCTGGGTAGGTCTTaGCTTGTATGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSVLGRS*LVCRTA
Trigger: TGCAGTCCTACATACAAGGCAAGACCTACCCAGCAC...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp CTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCTGTCGTGCCATACATTaGTGTCCTCATAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LAPVSQKSAAQLEPSRRFCRAIH*CPHRGR
Trigger: CCTACCTCTATGAGGACAGCAATGTATGGCACGACA...GAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCCAGGAATGCGTGTGCTaGGTAGGTCTTGCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSQECVC*VGLALY
Trigger: ATACAAGGCAAGACCTACCCAGCACACGCATTCCTG...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp AGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGCATGAGGAAGGGAGATaGGGAGGGTGTTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLRPMILRRQYPLGGSAWHEEGR*GGCLRL
Trigger: GAGCCTCAAACACCCTCCCCATCTCCCTTCCTCATG...CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GACCAATGGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTTGTTAACCCCCAGCAGCAGTaGCGGGACTTCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: DQWSQIGSPWTRFSWRLVNPQQQ*RDFRRA
Trigger: TGCCCTCCTGAAGTCCCGCCACTGCTGCTGGGGGTT...AACAAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTATGCCACCACTGATCTaGCAGAAGGCAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSMPPLI*QKAELR
Trigger: CCTGAGCTCTGCCTTCTGTCAGATCAGTGGTGGCAT...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp ATTGAGGCTCTGAGAGGTCCAGAACCTTCCCCAAGGTTACACAGTGGGGGAGTGAATCAGTGGGAGCCCTaGGTTTGTTTTCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: IEALRGPEPSPRLHSGGVNQWEP*VCFPAT
Trigger: AGTTGCTGGAAAACAAACTCAGGGCTCCCACTGATT...CACTCCCCCACTGTGTAACCTTGGGGAAGGTTCTGGACCTCTCAGAGCCTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp AAATCAGACTGGTACACAAGTCTCCAGTTCCCTATGTCCCCATCACTCCTCATCCGCCAGGAATGCGTGTaGTGGGTAGGTCTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KSDWYTSLQFPMSPSLLIRQECV*WVGLAL
Trigger: CAAGGCAAGACCTACCCAGCACACGCATTCCTGGCG...GATGAGGAGTGATGGGGACATAGGGAACTGGAGACTTGTGTACCAGTCTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp TTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGCAGACACCTCAGGGCTaGATTAATTGGAGGGACGGC +
Preference number: 4 (lower is better)
Translates to: LLQQTEPWDNTSWSLRPMQTPQG*INWRDG
Trigger: GCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTG...CATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp AGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAACTCACAGAAGTCAGCTaGACAGCTGGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: RHLRAALIGGTALVIDEELTEVS*TAGTKP
Trigger: CGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAG...TTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344022.7
CDS-3UTR GCA 90 bp CTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCTATTGCCTCTCAACCTaGTGTACAGAGGCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LAPVSQKSAAQLEPSRRFYCLST*CTEASF
Trigger: AAAACTGGCCTCTGTACAGCAGGTTGAGAGGCAATA...GAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGGCGAGGGCTGCAGGGTaGATCGGTGATACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILARAAG*IGDTQR
Trigger: TCTTTGAGTATCACCGATCCACCCTGCAGCCCTCGC...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp GGAAGTCTGAGATGTCGTGCCATACATTGCTGTCCTCATAGAGGTAGGTCATGGGCGAGGGCTGCAGGGTaGATCGGTGATACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GSLRCRAIHCCPHRGRSWARAAG*IGDTQR
Trigger: TCTTTGAGTATCACCGATCCACCCTGCAGCCCTCGC...CCATGACCTACCTCTATGAGGACAGCAATGTATGGCACGACATCTCAGACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR CCA 90 bp GAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGCCATGTTGGCCAGGCTaGTCAAGAACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: EPWDNTSWSLRPMILRRQPCWPG*SRTPDL
Trigger: GAGATCAGGAGTTCTTGACCAGCCTGGCCAACATGG...CTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGCAGCACCAGGGAGCCTaGGAGAAATGCAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILQHQGA*EKCRLS
Trigger: TGAGAGTCTGCATTTCTCCCAGGCTCCCTGGTGCTG...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCTCCTGCTGCGTGGCCTaGTTCCGAACAGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIISCCVA*FRTGHG
Trigger: TCCATGGCCTGTTCGGAACCAGGCCACGCAGCAGGA...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAGGCCAGTTTTAGTTTaGGTTCCCCCAATAGCAGAC +
Preference number: 4 (lower is better)
Translates to: EAYDLEKAVSFGRVCMGPRPVLV*VPPIAD
Trigger: GTCTGCTATTGGGGGAACCCAAACTAAAACTGGCCT...TGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGGGCAAACAGGACGCGTaGCAACAGGTACATGTTGAT +
Preference number: 4 (lower is better)
Translates to: EPWDNTSWSLRPMILRRQGKQDA*QQVHVD
Trigger: ATCAACATGTACCTGTTGTCACGCGTCCTGTTTGCC...CTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR TCA 90 bp GAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAATAGACGAGGAAGTCTaGGATGTCGTGCCATACATT +
Preference number: 4 (lower is better)
Translates to: EAYDLEKAVSFGRVCMGPIDEEV*DVVPYI
Trigger: AATGTATGGCACGACATCTCAGACTTCCTCGTCTAT...TGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR TCA 90 bp AGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAATACCTAAGGGCTCTGTaGCTCATTTGTCAGATGGGA +
Preference number: 4 (lower is better)
Translates to: RPMILRRQYPLGGSAWGQYLRAL*LICQMG
Trigger: TCCCATCTGACAAATGAGTCACAGAGCCCTTAGGTA...TTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTGCACTGGTAGGGGCATaGGGAAGGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSALVGA*GREMGR
Trigger: CCTCCCCATCTCCCTTCCTCATGCCCCTACCAGTGC...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGCAAAGCCTATGTCCCTaGCCACCATGCTATATTGCC +
Preference number: 4 (lower is better)
Translates to: SLRPMILRRQYPLGGSAWQSLCP*PPCYIA
Trigger: GGCAATATAGCATGGTGGTCAGGGACATAGGCTTTG...CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGGGTGAACACAAACCGTaGCAGGTTCCAGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILGEHKP*QVPGVD
Trigger: ATCCACTCCTGGAACCTGGCACGGTTTGTGTTCACC...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR GCA 90 bp GGAAGTCTGAGATGTCGTGCCATACATTGCTGTCCTCATAGAGGTAGGTCATGGTCCTTTGGGAGGGTCTaGATGGGGCCAAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: GSLRCRAIHCCPHRGRSWSFGRV*MGPNLE
Trigger: CTCAAGATTTGGCCCCATGCAGACCCTCCCAAAGGA...CCATGACCTACCTCTATGAGGACAGCAATGTATGGCACGACATCTCAGACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR GCA 90 bp ACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGGTTGGAAGCACCAGATaGTCTAGCAGCATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TSWSLRPMILRRQYPLGGVGSTR*SSSIQR
Trigger: TCTCTGGATGCTGCTAGAGCATCTGGTGCTTCCAAC...CCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GGCTCTTGTTATAGACGAGGAAGTCTGAGATGTCGTGCCATACATTGCTGTCCTATGTGGCCTGCAGTATaGCCCACAGCTTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GSCYRRGSLRCRAIHCCPMWPAV*PTASPG
Trigger: TCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACAT...AGGACAGCAATGTATGGCACGACATCTCAGACTTCCTCGTCTATAACAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR CCA 90 bp CAGGAACTAGCATTTAGGAAGCATAGCACTTACTGTGCAACAAGAGCCCTCTGGATGTGGCCTGCAGTATaGCCCACAGCTTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QELAFRKHSTYCATRALWMWPAV*PTASPG
Trigger: TCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACAT...CCAGAGGGCTCTTGTTGCACAGTAAGTGCTATGCTTCCTAAATGCTAGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp AACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGACATAGAGGTAGGTCATaGAGGACTGCAGCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NTSWSLRPMILRRQYPLGHRGRS*RTAARA
Trigger: AGCCCTCGCTGCAGTCCTCCATGACCTACCTCTATG...TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp CAGGAACTAGCATTTAGGAAGCATAGCACTTACTGTGCAACAAGAGCCCTCTGGTTGGGAGGGTCTGCATaGGGCCAAATCTTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QELAFRKHSTYCATRALWLGGSA*GQILSH
Trigger: GTGGCTCAAGATTTGGCCCCATGCAGACCCTCCCAA...CCAGAGGGCTCTTGTTGCACAGTAAGTGCTATGCTTCCTAAATGCTAGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGGGGGTTTTACCATGTTaGCCAGGCTGGTCAAGAACT +
Preference number: 4 (lower is better)
Translates to: EPWDNTSWSLRPMILRRQGVLPC*PGWSRT
Trigger: AGTTCTTGACCAGCCTGGCCAACATGGTAAAACCCC...CTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp AACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGATTTTCCACGGACCACTaGGGAGGGGACGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: NTSWSLRPMILRRQYPLGFSTDH*GGDVVS
Trigger: TGAAACCACGTCCCCTCCCCAGTGGTCCGTGGAAAA...TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GACCAATGGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTTGTTTCCTCTCAGATCTGCTaGAAGGCAGAGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DQWSQIGSPWTRFSWRLVSSQIC*KAEPCS
Trigger: GGAGCAGGGCTCTGCCTTCCAGCAGATCTGAGAGGA...AACAAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 72 bp TGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTaGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: WDNTSWSLRPMI*RRQYPLGGSAW
Trigger: CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR TCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGGGCAAACAGGACGCGTaGCAACAGGTACATGTTGAT +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILGKQDA*QQVHVD
Trigger: ATCAACATGTACCTGTTGTCACGCGTCCTGTTTGCC...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR TCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTCCCACCCCAGCTCACTaGATCAGAAGCTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSPTPAH*IRSCIL
Trigger: TAAAATGCAGCTTCTGATTCAGTGAGCTGGGGTGGG...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCATCTAAGACAAGGGTTTaGGTGCAAGTGGTTCATATG +
Preference number: 4 (lower is better)
Translates to: EAYDLEKAVSFGRVCMGPSKTRV*VQVVHM
Trigger: CATATGAACCACTTGCACTCAAACCCTTGTCTTAGA...TGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp TGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTGAGATGTCGTCTGCACAAACACAGGTaGCCCTGCCATTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CINWRDGSCYRRGSLRCRLHKHR*PCHSGR
Trigger: TCTTCCGGAATGGCAGGGGCACCTGTGTTTGTGCAG...ACGACATCTCAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR GCA 90 bp AAATCAGACTGGTACACAAGTCTCCAGTTCCCTATGTCCCCATCACTCCTCATCTCCTTTGGGAGGGTCTaGATGGGGCCAAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: KSDWYTSLQFPMSPSLLISFGRV*MGPNLE
Trigger: CTCAAGATTTGGCCCCATGCAGACCCTCCCAAAGGA...GATGAGGAGTGATGGGGACATAGGGAACTGGAGACTTGTGTACCAGTCTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp CAGGAACTAGCATTTAGGAAGCATAGCACTTACTGTGCAACAAGAGCCCTCTGGGTATTTACAACCCACTaGCCACCAGCAAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QELAFRKHSTYCATRALWVFTTH*PPARSP
Trigger: AGGGCTCCTTGCTGGTGGGCAGTGGGTTGTAAATAC...CCAGAGGGCTCTTGTTGCACAGTAAGTGCTATGCTTCCTAAATGCTAGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCCTCAGGTTATCTGCCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIILRLSA*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGGCAGGCAGATAACCTGAG...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTTGGCCCAGGCTGGAGTaGAGTCGTGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSWPRLE*SRAISA
Trigger: AGCTGAGATCGCACGACTGCACTCCAGCCTGGGCCA...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGATCTGCTATAAAACCTaGCTGGTGATGGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILICYKT*LVMAQA
Trigger: GGCTTGGGCCATCACCAGGCAGGTTTTATAGCAGAT...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCGCTAAAAGCAGGGTGTaGTCAGTCCTCAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIIAKSRV*SVLRGT
Trigger: TGTGCCCCTGAGGACTGAGCACACCCTGCTTTTAGC...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTAGGAGTGGATATATGTaGCCTGCAGTATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSRSGYM*PAVWPT
Trigger: TGTGGGCCATACTGCAGGCCACATATATCCACTCCT...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTCAGGAATGCGTGTGCTaGGTAGGTCTTGCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSQECVC*VGLALY
Trigger: ATACAAGGCAAGACCTACCCAGCACACGCATTCCTG...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CCA 90 bp TGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTGAGATGTCGTCATAGAGGTAGGTCATaGAGGACTGCAGCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CINWRDGSCYRRGSLRCRHRGRS*RTAARA
Trigger: AGCCCTCGCTGCAGTCCTCCATGACCTACCTCTATG...ACGACATCTCAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR CCA 90 bp GAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTGGGATAACACCAGTTaGAGTCTGAGGCCTATGATC +
Preference number: 4 (lower is better)
Translates to: EPWDNTSWSLRPMILRRQWDNTS*SLRPMI
Trigger: GATCATAGGCCTCAGACTCCAACTGGTGTTATCCCA...CTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTCAGCAAACGGAACCCTaGGATAACACCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSQQTEP*DNTSWS
Trigger: ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTG...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp CTGCAGCGAGGGCTGCAGGGTGGATCGGTGATACTCAAAGAGCCACAGCACCAGTACAAAGGTACCCACTaGGATTTTAAAATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LQRGLQGGSVILKEPQHQYKGTH*DFKISV
Trigger: AACACTGATTTTAAAATCCCAGTGGGTACCTTTGTA...CTGGTGCTGTGGCTCTTTGAGTATCACCGATCCACCCTGCAGCCCTCGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR CCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCCCCAAGGTTACACAGTaGGGGAGTGGGGACTCAAAC +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIIPKVTQ*GSGDSN
Trigger: GTTTGAGTCCCCACTCCCCCACTGTGTAACCTTGGG...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp AGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAACAAATTGGTAGCCCATaGACCAGATTTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RPMILRRQYPLGGSAWGQQIGSP*TRFSWR
Trigger: TCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTG...TTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCGACTCATTTGTCAGATaGGATAATAATGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSDSFVR*DNNGRL
Trigger: GAGCCGTCCATTATTATCCCATCTGACAAATGAGTC...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGGGTTCATATGGGAAGTaGTCCCAGGAAGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILGSYGK*SQEALV
Trigger: TACCAGTGCTTCCTGGGACCACTTCCCATATGAACC...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp TTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGACAGGTCTTAGAGAATaGAGGGCAGCTAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LLQQTEPWDNTSWSLRPMTGLRE*RAARKE
Trigger: CTCCTTCCTAGCTGCCCTCCATTCTCTAAGACCTGT...CATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp ATTGAGGCTCTGAGAGGTCCAGAACCTTCCCCAAGGTTACACAGTGGGGGAGTGCATTTTATGATAAATTaGGGCTCTGAGAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: IEALRGPEPSPRLHSGGVHFMIN*GSERSR
Trigger: TCTGGACCTCTCAGAGCCTCAATTTATCATAAAATG...CACTCCCCCACTGTGTAACCTTGGGGAAGGTTCTGGACCTCTCAGAGCCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAACTTACAGAATCAGACTaGTCCCACCTCAATTACCTA +
Preference number: 4 (lower is better)
Translates to: RPMILRRQYPLGGSAWGQLTESD*SHLNYL
Trigger: TAGGTAATTGAGGTGGGATCAGTCTGATTCTGTAAG...TTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp AACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGATGGATATATGTGGCCTaGAGTATGGCCCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: NTSWSLRPMILRRQYPLGWIYVA*SMAHSF
Trigger: GAAGCTGTGGGCCATACTGCAGGCCACATATATCCA...TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR GCA 90 bp TGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTGAGATGTCGTGGTGAACACAAACCGTaGCAGGTTCCAGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: CINWRDGSCYRRGSLRCRGEHKP*QVPGVD
Trigger: ATCCACTCCTGGAACCTGGCACGGTTTGTGTTCACC...ACGACATCTCAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR GCA 90 bp ACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGAAGTCTGAGATGTCGTaGCATACATTGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TSWSLRPMILRRQYPLGGKSEMS*HTLLSS
Trigger: TGAGGACAGCAATGTATGGCACGACATCTCAGACTT...CCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp CAGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAAAGTCTGAGATGTCGTaGCATACATTGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QTPQGCINWRDGSCYRRGKSEMS*HTLLSS
Trigger: TGAGGACAGCAATGTATGGCACGACATCTCAGACTT...TCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR CCA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTGCCCACAGCTTCTCCTaGAGGCTGCACAAACACAGG +
Preference number: 4 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSAHSFS*RLHKHR
Trigger: CCTGTGTTTGTGCAGCCTCCAGGAGAAGCTGTGGGC...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR CCA 90 bp GTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGAGGAGTGGATATATGTaGCCTGCAGTATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: VFLLQQTEPWDNTSWSLRRSGYM*PAVWPT
Trigger: TGTGGGCCATACTGCAGGCCACATATATCCACTCCT...CCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CCA 90 bp AGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAATGGGATAACACCAGTTaGAGTCTGAGGCCTATGATC +
Preference number: 4 (lower is better)
Translates to: RHLRAALIGGTALVIDEEWDNTS*SLRPMI
Trigger: GATCATAGGCCTCAGACTCCAACTGGTGTTATCCCA...TTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR CCA 90 bp GTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCAGCAAACGGAACCCTaGGATAACACCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VFLLQQTEPWDNTSWSLRQQTEP*DNTSWS
Trigger: ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTG...CCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp TACTCCAAGTTTGCAGTAAATGTTGTGGCTGAAAACACAGCTTACAGAATCAGAATTAGCCGGGTGTGGTaGCGGGCACCTGTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YSKFAVNVVAENTAYRIRISRVW*RAPVGP
Trigger: TGGGCCTACAGGTGCCCGCCACCACACCCGGCTAAT...TCTGATTCTGTAAGCTGTGTTTTCAGCCACAACATTTACTGCAAACTTGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGTGCAAGTGGTTCATATaGGAAGTGGTCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VFLLQQTEPWDNTSWSLRCKWFI*EVVPGS
Trigger: GCTTCCTGGGACCACTTCCCATATGAACCACTTGCA...CCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTGGAGACCCTTGTAGGTaGACACAAACCGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSGDPCR*TQTVPG
Trigger: ACCTGGCACGGTTTGTGTTCACCTACAAGGGTCTCC...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR TCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCCTGGTCAAGAACTCCTaGTCTCAGGTTATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIILVKNS*SQVICL
Trigger: CAGGCAGATAACCTGAGATCAGGAGTTCTTGACCAG...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp GGCTCTTGTTATAGACGAGGAAGTCTGAGATGTCGTGCCATACATTGCTGTCCTTGTCGTGCCATACATTaGTGTCCTCATAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GSCYRRGSLRCRAIHCCPCRAIH*CPHRGR
Trigger: CCTACCTCTATGAGGACAGCAATGTATGGCACGACA...AGGACAGCAATGTATGGCACGACATCTCAGACTTCCTCGTCTATAACAAGAGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS-3UTR GCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGAAGTCTGAGATGTCGTaGCATACATTGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILKSEMS*HTLLSS
Trigger: TGAGGACAGCAATGTATGGCACGACATCTCAGACTT...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCAGACACCTCAGGGCTaGATTAATTGGAGGGACGGC +
Preference number: 4 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSQTPQG*INWRDG
Trigger: GCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTG...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp TACTCCAAGTTTGCAGTAAATGTTGTGGCTGAAAACACAGCTTACAGAATCAGAGGAACGGGTCCCACCTaGGTTCAGGGATGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: YSKFAVNVVAENTAYRIRGTGPT*VQGCSP
Trigger: AGGGCTACATCCCTGAACCCAGGTGGGACCCGTTCC...TCTGATTCTGTAAGCTGTGTTTTCAGCCACAACATTTACTGCAAACTTGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp TTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTCAGGGCTGCATTAATTaGAGGGACGGCTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: FLLQQTEPWDNTSWSLRPQGCIN*RDGSCY
Trigger: ATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTG...AGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp TACTCCAAGTTTGCAGTAAATGTTGTGGCTGAAAACACAGCTTACAGAATCAGAGCCCACAGCTTCTCCTaGAGGCTGCCATTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: YSKFAVNVVAENTAYRIRAHSFS*RLPFRK
Trigger: CTTCCGGAATGGCAGCCTCCAGGAGAAGCTGTGGGC...TCTGATTCTGTAAGCTGTGTTTTCAGCCACAACATTTACTGCAAACTTGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGTGGGTCCTGAAAATGTaGGTGGCAAAATATACACCC +
Preference number: 4 (lower is better)
Translates to: MILRRQYPLGGSAWGQILWVLKM*VAKYTP
Trigger: GGGTGTATATTTTGCCACCCACATTTTCAGGACCCA...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCGCCACTAGCCACATGTaGCTACTGGGTCCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIIATSHM*LLGPEN
Trigger: ATTTTCAGGACCCAGTAGCCACATGTGGCTAGTGGC...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp CTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCTGCAAGGCCACTGTATaGTTTAAAAATAATATGTGC +
Preference number: 4 (lower is better)
Translates to: LAPVSQKSAAQLEPSRRFCKATV*FKNNMC
Trigger: GCACATATTATTTTTAAACCATACAGTGGCCTTGCA...GAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTCTAGCTGTATTACCTTaGGCAAGTTACTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSLAVLP*ASYSPL
Trigger: GAGAGGAGAGTAACTTGCCCAAGGTAATACAGCTAG...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp ACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGATGTGTACCCCTTTCTaGCCCATATCCTATAATGAG +
Preference number: 4 (lower is better)
Translates to: TSWSLRPMILRRQYPLGGMCTPF*PISYNE
Trigger: CTCATTATAGGATATGGGCCAGAAAGGGGTACACAT...CCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp AGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGTATCTACCAGACCAATaGTCTCAAATTGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLRPMILRRQYPLGGSAWYLPDQ*SQIGSP
Trigger: TGGGCTACCAATTTGAGACCATTGGTCTGGTAGATA...CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp CAGGAACTAGCATTTAGGAAGCATAGCACTTACTGTGCAACAAGAGCCCTCTGGGGGTTTGAGTGCAAGTaGTTCATATGGGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: QELAFRKHSTYCATRALWGFECK*FIWEVV
Trigger: GACCACTTCCCATATGAACCACTTGCACTCAAACCC...CCAGAGGGCTCTTGTTGCACAGTAAGTGCTATGCTTCCTAAATGCTAGTTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTTTATCAGTCATTGGTTaGAGGTTGCTCCAAGGATGT +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSLSVIG*RLLQGC
Trigger: ACATCCTTGGAGCAACCTTCAACCAATGACTGATAA...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR GCA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTTCCTTTGGGAGGGTCTaGATGGGGCCAAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSSFGRV*MGPNLE
Trigger: CTCAAGATTTGGCCCCATGCAGACCCTCCCAAAGGA...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR GCA 90 bp AGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGACGAAAACACACATTTaGAAGGCCACTGTATGGTTT +
Preference number: 4 (lower is better)
Translates to: SLRPMILRRQYPLGGSAWTKTHI*KATVWF
Trigger: AAACCATACAGTGGCCTTGCAAATGTGTGTTTTCGT...CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCCAGGGCTGCATTAATTaGAGGGACGGCTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIIQGCIN*RDGSCY
Trigger: ATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTG...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp ATTGAGGCTCTGAGAGGTCCAGAACCTTCCCCAAGGTTACACAGTGGGGGAGTGCACTTCCTCTACATTTaGATGCTCTTAGAAATAACA +
Preference number: 4 (lower is better)
Translates to: IEALRGPEPSPRLHSGGVHFLYI*MLLEIT
Trigger: TGTTATTTCTAAGAGCATCCAAATGTAGAGGAAGTG...CACTCCCCCACTGTGTAACCTTGGGGAAGGTTCTGGACCTCTCAGAGCCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGAGAACAGTTGAAGAATaGACATACCCACCGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VFLLQQTEPWDNTSWSLRRTVEE*TYPPER
Trigger: TCTTTCCGGTGGGTATGTTCATTCTTCAACTGTTCT...CCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR TCA 90 bp AGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGAAATCAGACGAATCTaGGTTCAAATCTTGATTCGG +
Preference number: 4 (lower is better)
Translates to: SWSLRPMILRRQYPLGGSEIRRI*VQILIR
Trigger: CCGAATCAAGATTTGAACTCAGATTCGTCTGATTTC...AGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp AACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGATCCTGGAGACTTGTTTaGTTTGTCCAGGATTGTGTT +
Preference number: 4 (lower is better)
Translates to: NTSWSLRPMILRRQYPLGSWRLV*FVQDCV
Trigger: AACACAATCCTGGACAAATCAAACAAGTCTCCAGGA...TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp ACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTGGAAAACACCCAAGTaGAAGTATGAATGCACTAAA +
Preference number: 4 (lower is better)
Translates to: TSWSLRPMILRRQYPLGGWKTPK*KYECTK
Trigger: TTTAGTGCATTCATACTTCCACTTGGGTGTTTTCCA...CCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 72 bp GTGTGCTCAGTCCTCAGGGGCACACTTCCTCTACATTaGGATGCTCTTAGAAATAACAGCATTTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: VCSVLRGTLPLH*DALRNNSIYWG
Trigger: TCCCCAATAAATGCTGTTATTTCTAAGAGCATCCAAATGTAGAGGAAGTGTGCCCCTGAGGACTGAGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCAGAACAGTTGAAGAATaGACATACCCACCGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GLKPMSSSSRSALSTRIIRTVEE*TYPPER
Trigger: TCTTTCCGGTGGGTATGTTCATTCTTCAACTGTTCT...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp GACCAATGGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTTGTTCGCCTACTTTATCAATaGGGAAATAGAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: DQWSQIGSPWTRFSWRLVRLLYQ*GNRGTE
Trigger: TTCTGTGCCTCTATTTCCTCATTGATAAAGTAGGCG...AACAAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp TACTCCAAGTTTGCAGTAAATGTTGTGGCTGAAAACACAGCTTACAGAATCAGAGCCACATGTGGCTACTaGGTCCTGAAAATGTGGGTG +
Preference number: 4 (lower is better)
Translates to: YSKFAVNVVAENTAYRIRATCGY*VLKMWV
Trigger: CACCCACATTTTCAGGACCCAGTAGCCACATGTGGC...TCTGATTCTGTAAGCTGTGTTTTCAGCCACAACATTTACTGCAAACTTGGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp TTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTGTATTTATCAGTCATTaGTTGAAGGTTGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FLLQQTEPWDNTSWSLRPVFISH*LKVAPR
Trigger: CCTTGGAGCAACCTTCAACCAATGACTGATAAATAC...AGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp ACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGAATAACAGCATTTATTaGGGACTCACTTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: TSWSLRPMILRRQYPLGGNNSIY*GLTLTV
Trigger: CACAGTTAAAGTGAGTCCCCAATAAATGCTGTTATT...CCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
3UTR CAA 72 bp ATCCCACCTCAATTACCTAAGGGCTCTGTGACTCATTaGTCAGATGGGATAATAATGGACGGCTCCATATCA +
Preference number: 4 (lower is better)
Translates to: IPPQLPKGSVTH*SDGIIMDGSIS
Trigger: TGATATGGAGCCGTCCATTATTATCCCATCTGACAAATGAGTCACAGAGCCCTTAGGTAATTGAGGTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp TTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTAGGACCACGGCATTATaGTTATCCTCATTTTATGAT +
Preference number: 4 (lower is better)
Translates to: FLLQQTEPWDNTSWSLRPRTTAL*LSSFYD
Trigger: ATCATAAAATGAGGATAATCATAATGCCGTGGTCCT...AGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGTACAAAGGTACCCACTaGGATTTTAAAATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: VFLLQQTEPWDNTSWSLRYKGTH*DFKISV
Trigger: AACACTGATTTTAAAATCCCAGTGGGTACCTTTGTA...CCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CCA 90 bp CAGGAACTAGCATTTAGGAAGCATAGCACTTACTGTGCAACAAGAGCCCTCTGGTACAAAGGTACCCACTaGGATTTTAAAATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: QELAFRKHSTYCATRALWYKGTH*DFKISV
Trigger: AACACTGATTTTAAAATCCCAGTGGGTACCTTTGTA...CCAGAGGGCTCTTGTTGCACAGTAAGTGCTATGCTTCCTAAATGCTAGTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp TACTCCAAGTTTGCAGTAAATGTTGTGGCTGAAAACACAGCTTACAGAATCAGACATTGTAGGCCCCTATaGGCATTTGAATGTGTACCC +
Preference number: 4 (lower is better)
Translates to: YSKFAVNVVAENTAYRIRHCRPL*AFECVP
Trigger: GGGTACACATTCAAATGCCCATAGGGGCCTACAATG...TCTGATTCTGTAAGCTGTGTTTTCAGCCACAACATTTACTGCAAACTTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR TCA 90 bp TACTCCAAGTTTGCAGTAAATGTTGTGGCTGAAAACACAGCTTACAGAATCAGAATAGACGAGGAAGTCTaGGATGTCGTGCCATACATT +
Preference number: 4 (lower is better)
Translates to: YSKFAVNVVAENTAYRIRIDEEV*DVVPYI
Trigger: AATGTATGGCACGACATCTCAGACTTCCTCGTCTAT...TCTGATTCTGTAAGCTGTGTTTTCAGCCACAACATTTACTGCAAACTTGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CCA 90 bp GACCAATGGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTTGTTTCTACATCTGTAAAATaGGGACGAAAACACACATTT +
Preference number: 4 (lower is better)
Translates to: DQWSQIGSPWTRFSWRLVSTSVK*GRKHTF
Trigger: AAATGTGTGTTTTCGTCCCCATTTTACAGATGTAGA...AACAAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS GCA 90 bp CGCTTGCGCAGCAGTGCGTTGACGACTACGAGCAGAGCCCTTAGCTaGGGCGGGGCTGCCATAGTGCGGGCTGCGCGCAGGGTCGGGGTT +
Preference number: 5 (lower is better)
Translates to: RLRSSALTTTSRALS*GGAAIVRAARRVGV
Trigger: AACCCCGACCCTGCGCGCAGCCCGCACTATGGCAGCCCCGCCGCAGCTAAGGGCTCTGCTCGTAGTCGTCAACGCACTGCTGCGCAAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CAA 90 bp CACCACCGCAGTGAGCAGCGGGAACGGGTCCCACCTGGGTTCAGGGATGTAGCCTTGCGCAGCAGTGCGTaGACGACTACGAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: HHRSEQRERVPPGFRDVALRSSA*TTTSRA
Trigger: GGCTCTGCTCGTAGTCGTCAACGCACTGCTGCGCAA...GGCTACATCCCTGAACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS TCA 90 bp CCCACAGCTTCTCCTGGAGGCTGCCATTCCGGAAGAGAAAGGTCATaGCCAGCGCGTGAGGGGCCCGGATTTTGGCTCCATAGACAGCCC +
Preference number: 5 (lower is better)
Translates to: PTASPGGCHSGRERS*PAREGPGFWLHRQP
Trigger: GGGCTGTCTATGGAGCCAAAATCCGGGCCCCTCACGCGCTGGTCATGACCTTTCTCTTCCGGAATGGCAGCCTCCAGGAGAAGCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp CTGCAGCGAGGGCTGCAGGGTGGATCGGTGATACTCAAAGAGCCACAGCACCAGTTGCGCAGCAGTGCGTaGACGACTACGAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LQRGLQGGSVILKEPQHQLRSSA*TTTSRA
Trigger: GGCTCTGCTCGTAGTCGTCAACGCACTGCTGCGCAA...CTGGTGCTGTGGCTCTTTGAGTATCACCGATCCACCCTGCAGCCCTCGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS GCA 90 bp TCCAAACACCAGGATACCCCCGAGGAAGGCCGCCAGGAATGCGTGTaGTGGGTAGGTCTTGCCTTGTATGTAGGACTGCAGGGCACGGAG +
Preference number: 5 (lower is better)
Translates to: SKHQDTPEEGRQECV*WVGLALYVGLQGTE
Trigger: CTCCGTGCCCTGCAGTCCTACATACAAGGCAAGACCTACCCAGCACACGCATTCCTGGCGGCCTTCCTCGGGGGTATCCTGGTGTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS CCA 90 bp AAACACCAGGATACCCCCGAGGAAGGCCGCCAGGAATGCGTGTGCTaGGTAGGTCTTGCCTTGTATGTAGGACTGCAGGGCACGGAGACC +
Preference number: 5 (lower is better)
Translates to: KHQDTPEEGRQECVC*VGLALYVGLQGTET
Trigger: GGTCTCCGTGCCCTGCAGTCCTACATACAAGGCAAGACCTACCCAGCACACGCATTCCTGGCGGCCTTCCTCGGGGGTATCCTGGTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CAA 90 bp CACCACCGCAGTGAGCAGCGGGAACGGGTCCCACCTGGGTTCAGGGATGTAGCCCTGAGGCCTATGATCTaGAGAAGGCAGTATCCTTTG +
Preference number: 5 (lower is better)
Translates to: HHRSEQRERVPPGFRDVALRPMI*RRQYPL
Trigger: CAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAG...GGCTACATCCCTGAACCCAGGTGGGACCCGTTCCCGCTGCTCACTGCGGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS GCA 90 bp GTTTTCTCCAAACACCAGGATACCCCCGAGGAAGGCCGCCAGGAATaGGTGTGCTGGGTAGGTCTTGCCTTGTATGTAGGACTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VFSKHQDTPEEGRQE*VCWVGLALYVGLQG
Trigger: GCCCTGCAGTCCTACATACAAGGCAAGACCTACCCAGCACACGCATTCCTGGCGGCCTTCCTCGGGGGTATCCTGGTGTTTGGAGAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS CCA 90 bp CAAACCGTGCCAGGTTCCAGGAGTGGATATATGTGGCCTGCAGTATaGCCCACAGCTTCTCCTGGAGGCTGCACAAACACAGGTGCCCCT +
Preference number: 5 (lower is better)
Translates to: QTVPGSRSGYMWPAV*PTASPGGCTNTGAP
Trigger: AGGGGCACCTGTGTTTGTGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATATCCACTCCTGGAACCTGGCACGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS GCA 90 bp GTAGGACTGCAGGGCACGGAGACCCTTGTAGGTGAACACAAACCGTaGCAGGTTCCAGGAGTGGATATATGTGGCCTGCAGTATGGCCCA +
Preference number: 5 (lower is better)
Translates to: VGLQGTETLVGEHKP*QVPGVDICGLQYGP
Trigger: TGGGCCATACTGCAGGCCACATATATCCACTCCTGGAACCTGGCACGGTTTGTGTTCACCTACAAGGGTCTCCGTGCCCTGCAGTCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS GCA 90 bp GTGAACACAAACCGTGCCAGGTTCCAGGAGTGGATATATGTGGCCTaGAGTATGGCCCACAGCTTCTCCTGGAGGCTGCCATTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: VNTNRARFQEWIYVA*SMAHSFSWRLPFRK
Trigger: CTTCCGGAATGGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATATCCACTCCTGGAACCTGGCACGGTTTGTGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS CCA 90 bp CAGGAGTGGATATATGTGGCCTGCAGTATGGCCCACAGCTTCTCCTaGAGGCTGCACAAACACAGGTGCCCCTGCCATTCCGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: QEWIYVACSMAHSFS*RLHKHRCPCHSGRE
Trigger: TTCTCTTCCGGAATGGCAGGGGCACCTGTGTTTGTGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATATCCACTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS CCA 90 bp CAAACCGTGCCAGGTTCCAGGAGTGGATATATGTGGCCTGCAGTATaGCCCACAGCTTCTCCTGGAGGCTGCCATTCCGGAAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: QTVPGSRSGYMWPAV*PTASPGGCHSGRER
Trigger: CCTTTCTCTTCCGGAATGGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATATCCACTCCTGGAACCTGGCACGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCGCATGGGGCCAAATCTaGAGCCACAGCCAGACACCT +
Preference number: 5 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSAWGQI*SHSQTP
Trigger: AGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGC...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CAA 90 bp CAAATCTTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTGGAGGGACGGCAGAAGGCAGTATCCTTaGGGAGGGTCTGCATGGGGC +
Preference number: 5 (lower is better)
Translates to: QILSHSQTPQGCINWRDGRRQYP*GGSAWG
Trigger: GCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCT...GCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAAGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000344022.7
CDS TCA 90 bp GACAACAGGTACATGTTGATCTGCCATTCCGGAAGAGAAAGGTCATaGCCAGCGCGTGAGGGGCCCGGATTTTGGCTCCATAGACAGCCC +
Preference number: 5 (lower is better)
Translates to: DNRYMLICHSGRERS*PAREGPGFWLHRQP
Trigger: GGGCTGTCTATGGAGCCAAAATCCGGGCCCCTCACGCGCTGGTCATGACCTTTCTCTTCCGGAATGGCAGATCAACATGTACCTGTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344022.7
CDS GCA 90 bp GTGAACACAAACCGTGCCAGGTTCCAGGAGTGGATATATGTGGCCTaGAGTATGGCCCACAGCTTCTCCTGGAGGCTGCACAAACACAGG +
Preference number: 5 (lower is better)
Translates to: VNTNRARFQEWIYVA*SMAHSFSWRLHKHR
Trigger: CCTGTGTTTGTGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATATCCACTCCTGGAACCTGGCACGGTTTGTGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR CAA 90 bp TTGAGCCACAGCCAGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTTGGGTAGGTCTTGCCTaGTATGTAGGACTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LSHSQTPQGCINWRDGSCWVGLA*YVGLQG
Trigger: GCCCTGCAGTCCTACATACAAGGCAAGACCTACCCA...ACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGCTGTGGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR CAA 90 bp TTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGAGATGGGGAGGGTGTTaGAGGCTCAGCCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LLQQTEPWDNTSWSLRPMRWGGC*RLSPAG
Trigger: CCCAGCAGGGCTGAGCCTCAAACACCCTCCCCATCT...CATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp GAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGGCATGGGGCCAAATCTaGAGCCACAGCCAGACACCT +
Preference number: 5 (lower is better)
Translates to: EPWDNTSWSLRPMILRRQAWGQI*SHSQTP
Trigger: AGGTGTCTGGCTGTGGCTCAAGATTTGGCCCCATGC...CTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CAA 90 bp TGGCTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGACTGAGGCCTATGATCTaGAGAAGGCAGTATCCTTTG +
Preference number: 5 (lower is better)
Translates to: WLAPVSQKSAAQLEPSRRLRPMI*RRQYPL
Trigger: CAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAG...TCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CAA 90 bp AGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAGAATGGCTCAGTCACTaGCCCAAGGAAACTGTGGGG +
Preference number: 5 (lower is better)
Translates to: RPMILRRQYPLGGSAWGQEWLSH*PKETVG
Trigger: CCCCACAGTTTCCTTGGGCAAGTGACTGAGCCATTC...TTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS TCA 90 bp TCTTGCCTTGTATGTAGGACTGCAGGGCACGGAGACCCTTGTAGGTaGACACAAACCGTGCCAGGTTCCAGGAGTGGATATATGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SCLVCRTAGHGDPCR*TQTVPGSRSGYMWP
Trigger: AGGCCACATATATCCACTCCTGGAACCTGGCACGGTTTGTGTTCACCTACAAGGGTCTCCGTGCCCTGCAGTCCTACATACAAGGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CAA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCTTGCGCAGCAGTGCGTaGACGACTACGAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GLKPMSSSSRSALSTRIILRSSA*TTTSRA
Trigger: GGCTCTGCTCGTAGTCGTCAACGCACTGCTGCGCAA...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp TTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTAGAAGGCAGTATCCTTaGGGAGGGTCTGCATGGGGC +
Preference number: 5 (lower is better)
Translates to: FLLQQTEPWDNTSWSLRPRRQYP*GGSAWG
Trigger: GCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCT...AGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CAA 90 bp CTGGCCCCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCTTCCTGGAGACTTGTTaGATTTGTCCAGGATTGTGT +
Preference number: 5 (lower is better)
Translates to: LAPVSQKSAAQLEPSRRFFLETC*ICPGLC
Trigger: ACACAATCCTGGACAAATCAAACAAGTCTCCAGGAA...GAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp AGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAACCAATGGTCTCAAATaGGTAGCCCATGGACCAGAT +
Preference number: 5 (lower is better)
Translates to: RPMILRRQYPLGGSAWGQTNGLK*VAHGPD
Trigger: ATCTGGTCCATGGGCTACCAATTTGAGACCATTGGT...TTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp GAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGGACCACCATGCTATATaGCCTCTCAACCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: EPWDNTSWSLRPMILRRQDHHAI*PLNLLY
Trigger: GTACAGCAGGTTGAGAGGCAATATAGCATGGTGGTC...CTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTTATCCCAGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp GTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGCCCTGGAGTGTGCAGTaGGAAGCACCAGATGCTCTA +
Preference number: 5 (lower is better)
Translates to: VFLLQQTEPWDNTSWSLRPWSVQ*EAPDAL
Trigger: TAGAGCATCTGGTGCTTCCAACTGCACACTCCAGGG...CCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp CCAGTCTCACAGAAGTCAGCTGCACAGCTGGAACCAAGCCGTAGATTCCTCAGCTGGCTGTTGATGTTATaGTTTTCTCCAAACACCAGG +
Preference number: 5 (lower is better)
Translates to: PVSQKSAAQLEPSRRFLSWLLML*FSPNTR
Trigger: CCTGGTGTTTGGAGAAAACAATAACATCAACAGCCA...GCTGAGGAATCTACGGCTTGGTTCCAGCTGTGCAGCTGACTTCTGTGAGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp GCCAGACACCTCAGGGCTGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGACAACAGGTACATGTaGATCTGGCTGTTGATGTTA +
Preference number: 5 (lower is better)
Translates to: ARHLRAALIGGTALVIDEDNRYM*IWLLML
Trigger: TAACATCAACAGCCAGATCAACATGTACCTGTTGTC...CTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCAGCCCTGAGGTGTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS-3UTR CAA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTAGAAGGCAGTATCCTTaGGGAGGGTCTGCATGGGGC +
Preference number: 5 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSRRQYP*GGSAWG
Trigger: GCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCT...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CAA 90 bp GACCAATGGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTTGTTTGGGGTTTTACCATGTaGGCCAGGCTGGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: DQWSQIGSPWTRFSWRLVWGFTM*ARLVKN
Trigger: GTTCTTGACCAGCCTGGCCAACATGGTAAAACCCCA...AACAAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp GGACTCAAACCCATGTCCTCTAGCTCTAGATCTGCACTGTCCACTAGAATAATCGGCCCCTATGGGCATTaGAATGTGTACCCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GLKPMSSSSRSALSTRIIGPYGH*NVYPFL
Trigger: CAGAAAGGGGTACACATTCAAATGCCCATAGGGGCC...GATTATTCTAGTGGACAGTGCAGATCTAGAGCTAGAGGACATGGGTTTGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp ATTGAGGCTCTGAGAGGTCCAGAACCTTCCCCAAGGTTACACAGTGGGGGAGTGGATTTTCCTGGAGACTaGTTTGATTTGTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: IEALRGPEPSPRLHSGGVDFPGD*FDLSRI
Trigger: AATCCTGGACAAATCAAACAAGTCTCCAGGAAAATC...CACTCCCCCACTGTGTAACCTTGGGGAAGGTTCTGGACCTCTCAGAGCCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp AAATCAGTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTTGGGTAGGTCTTGCCTaGTATGTAGGACTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: KSVFLLQQTEPWDNTSWSWVGLA*YVGLQG
Trigger: GCCCTGCAGTCCTACATACAAGGCAAGACCTACCCA...ACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACACTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CAA 90 bp GAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAATGTTGATCTGGCTGTaGATGTTATTGTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: EAYDLEKAVSFGRVCMGPMLIWL*MLLFSP
Trigger: TGGAGAAAACAATAACATCAACAGCCAGATCAACAT...TGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CAA 90 bp AGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGACAACAGGTACATGTaGATCTGGCTGTTGATGTTA +
Preference number: 5 (lower is better)
Translates to: SLRPMILRRQYPLGGSAWDNRYM*IWLLML
Trigger: TAACATCAACAGCCAGATCAACATGTACCTGTTGTC...CCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CAA 90 bp AACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGACTGAGGCCTATGATCTaGAGAAGGCAGTATCCTTTG +
Preference number: 5 (lower is better)
Translates to: NTSWSLRPMILRRQYPLGLRPMI*RRQYPL
Trigger: CAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAG...TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS-3UTR CAA 90 bp TGCATTAATTGGAGGGACGGCTCTTGTTATAGACGAGGAAGTCTGAGATGTCGTGACAACAGGTACATGTaGATCTGCCATTCCGGAAGA +
Preference number: 5 (lower is better)
Translates to: CINWRDGSCYRRGSLRCRDNRYM*ICHSGR
Trigger: TCTTCCGGAATGGCAGATCAACATGTACCTGTTGTC...ACGACATCTCAGACTTCCTCGTCTATAACAAGAGCCGTCCCTCCAATTAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344022.7
CDS-3UTR CAA 90 bp AAATCAGACTGGTACACAAGTCTCCAGTTCCCTATGTCCCCATCACTCCTCATCGCTCACGTGTTTCTATaGGACAGTGGGAATCTAGAA +
Preference number: 5 (lower is better)
Translates to: KSDWYTSLQFPMSPSLLIAHVFL*DSGNLE
Trigger: TTCTAGATTCCCACTGTCCAATAGAAACACGTGAGC...GATGAGGAGTGATGGGGACATAGGGAACTGGAGACTTGTGTACCAGTCTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp GTGTTTTTACTTCAGCAAACGGAACCCTGGGATAACACCAGTTGGAGTCTGAGGTGGCTGTTGATGTTATaGTTTTCTCCAAACACCAGG +
Preference number: 5 (lower is better)
Translates to: VFLLQQTEPWDNTSWSLRWLLML*FSPNTR
Trigger: CCTGGTGTTTGGAGAAAACAATAACATCAACAGCCA...CCTCAGACTCCAACTGGTGTTATCCCAGGGTTCCGTTTGCTGAAGTAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CAA 90 bp AACACCAGTTGGAGTCTGAGGCCTATGATCTTGAGAAGGCAGTATCCTTTGGGAGGCTCTGTGACTCATTaGTCAGATGGGATAATAATG +
Preference number: 5 (lower is better)
Translates to: NTSWSLRPMILRRQYPLGGSVTH*SDGIIM
Trigger: CATTATTATCCCATCTGACAAATGAGTCACAGAGCC...TCCCAAAGGATACTGCCTTCTCAAGATCATAGGCCTCAGACTCCAACTGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp ATGATCTTGAGAAGGCAGTATCCTTTGGGAGGGTCTGCATGGGGCCAAATCTTGATGTTGATCTGGCTGTaGATGTTATTGTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: MILRRQYPLGGSAWGQILMLIWL*MLLFSP
Trigger: TGGAGAAAACAATAACATCAACAGCCAGATCAACAT...CAAGATTTGGCCCCATGCAGACCCTCCCAAAGGATACTGCCTTCTCAAGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS-3UTR CAA 90 bp GACCAATGGTCTCAAATTGGTAGCCCATGGACCAGATTTTCCTGGAGACTTGTTTTTATCAGTCATTGGTaGAAGGTTGCTCCAAGGATG +
Preference number: 5 (lower is better)
Translates to: DQWSQIGSPWTRFSWRLVFISHW*KVAPRM
Trigger: CATCCTTGGAGCAACCTTCAACCAATGACTGATAAA...AACAAGTCTCCAGGAAAATCTGGTCCATGGGCTACCAATTTGAGACCATTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp TACTCCAAGTTTGCAGTAAATGTTGTGGCTGAAAACACAGCTTACAGAATCAGAGACGAAAACACACATTaGCAAGGCCACTGTATGGTT +
Preference number: 5 (lower is better)
Translates to: YSKFAVNVVAENTAYRIRDENTH*QGHCMV
Trigger: AACCATACAGTGGCCTTGCAAATGTGTGTTTTCGTC...TCTGATTCTGTAAGCTGTGTTTTCAGCCACAACATTTACTGCAAACTTGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS-3UTR CAA 90 bp TACTCCAAGTTTGCAGTAAATGTTGTGGCTGAAAACACAGCTTACAGAATCAGACACCAGGGACCAGTTTaGGGGAAGATAATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: YSKFAVNVVAENTAYRIRHQGPV*GKIIFP
Trigger: TGGAAAAATTATCTTCCCCAAAACTGGTCCCTGGTG...TCTGATTCTGTAAGCTGTGTTTTCAGCCACAACATTTACTGCAAACTTGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS TCA 72 bp ACGCAGCGTGGTAGCGGCGCTTGCGCAGCAGTGCGTTaGCGACTACGAGCAGAGCCCTTAGCTGCGGCGGGG +
Preference number: 6 (lower is better)
Translates to: TQRGSGACAAVR*RLRAEPLAAAG
Trigger: CCCCGCCGCAGCTAAGGGCTCTGCTCGTAGTCGTCAACGCACTGCTGCGCAAGCGCCGCTACCACGCTGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS GCA 72 bp AGCAGTGCGTTGACGACTACGAGCAGAGCCCTTAGCTaGGGCGGGGCTGCCATAGTGCGGGCTGCGCGCAGG +
Preference number: 6 (lower is better)
Translates to: SSALTTTSRALS*GGAAIVRAARR
Trigger: CCTGCGCGCAGCCCGCACTATGGCAGCCCCGCCGCAGCTAAGGGCTCTGCTCGTAGTCGTCAACGCACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217398.3
ENST00000344022.7
ENST00000409299.8
CDS GCA 72 bp TGGCCTGCAGTATGGCCCACAGCTTCTCCTGGAGGCTaGACAAACACAGGTGCCCCTGCCATTCCGGAAGAG +
Preference number: 6 (lower is better)
Translates to: WPAVWPTASPGG*TNTGAPAIPEE
Trigger: CTCTTCCGGAATGGCAGGGGCACCTGTGTTTGTGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS GCA 72 bp GGAAGGCCGCCAGGAATGCGTGTGCTGGGTAGGTCTTaGCTTGTATGTAGGACTGCAGGGCACGGAGACCCT +
Preference number: 6 (lower is better)
Translates to: GRPPGMRVLGRS*LVCRTAGHGDP
Trigger: AGGGTCTCCGTGCCCTGCAGTCCTACATACAAGGCAAGACCTACCCAGCACACGCATTCCTGGCGGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS CAA 90 bp CCCGAGGAAGGCCGCCAGGAATGCGTGTGCTGGGTAGGTCTTGCCTaGTATGTAGGACTGCAGGGCACGGAGACCCTTGTAGGTGAACAC +
Preference number: 6 (lower is better)
Translates to: PEEGRQECVCWVGLA*YVGLQGTETLVGEH
Trigger: GTGTTCACCTACAAGGGTCTCCGTGCCCTGCAGTCCTACATACAAGGCAAGACCTACCCAGCACACGCATTCCTGGCGGCCTTCCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS TCA 72 bp TCTCCTGGAGGCTGCCATTCCGGAAGAGAAAGGTCATaGCCAGCGCGTGAGGGGCCCGGATTTTGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: SPGGCHSGRERS*PAREGPGFWLH
Trigger: ATGGAGCCAAAATCCGGGCCCCTCACGCGCTGGTCATGACCTTTCTCTTCCGGAATGGCAGCCTCCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS CAA 72 bp GGCCGCCAGGAATGCGTGTGCTGGGTAGGTCTTGCCTaGTATGTAGGACTGCAGGGCACGGAGACCCTTGTA +
Preference number: 6 (lower is better)
Translates to: GRQECVCWVGLA*YVGLQGTETLV
Trigger: TACAAGGGTCTCCGTGCCCTGCAGTCCTACATACAAGGCAAGACCTACCCAGCACACGCATTCCTGGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS CCA 72 bp CCAGGTTCCAGGAGTGGATATATGTGGCCTGCAGTATaGCCCACAGCTTCTCCTGGAGGCTGCCATTCCGGA +
Preference number: 6 (lower is better)
Translates to: PGSRSGYMWPAV*PTASPGGCHSG
Trigger: TCCGGAATGGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATATCCACTCCTGGAACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409299.8
CDS TCA 72 bp CTCTACAGCCAGGCGGCTCAGGGCAAACAGGACGCGTaGCAACAGGTACATGTTGATCTGCCATTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: LYSQAAQGKQDA*QQVHVDLPFRK
Trigger: CTTCCGGAATGGCAGATCAACATGTACCTGTTGTCACGCGTCCTGTTTGCCCTGAGCCGCCTGGCTGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344022.7
CDS GCA 72 bp CAGGGCACGGAGACCCTTGTAGGTGAACACAAACCGTaGCAGGTTCCAGGAGTGGATATATGTGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: QGTETLVGEHKP*QVPGVDICGLQ
Trigger: CTGCAGGCCACATATATCCACTCCTGGAACCTGGCACGGTTTGTGTTCACCTACAAGGGTCTCCGTGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS GCA 72 bp AAACACCAGGATACCCCCGAGGAAGGCCGCCAGGAATaGGTGTGCTGGGTAGGTCTTGCCTTGTATGTAGGA +
Preference number: 6 (lower is better)
Translates to: KHQDTPEEGRQE*VCWVGLALYVG
Trigger: TCCTACATACAAGGCAAGACCTACCCAGCACACGCATTCCTGGCGGCCTTCCTCGGGGGTATCCTGGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS CCA 72 bp ATATATGTGGCCTGCAGTATGGCCCACAGCTTCTCCTaGAGGCTGCACAAACACAGGTGCCCCTGCCATTCC +
Preference number: 6 (lower is better)
Translates to: IYVACSMAHSFS*RLHKHRCPCHS
Trigger: GGAATGGCAGGGGCACCTGTGTTTGTGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS CCA 72 bp ACACAAACCGTGCCAGGTTCCAGGAGTGGATATATGTaGCCTGCAGTATGGCCCACAGCTTCTCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: TQTVPGSRSGYM*PAVWPTASPGG
Trigger: GCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATATCCACTCCTGGAACCTGGCACGGTTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS CCA 72 bp CCAGGTTCCAGGAGTGGATATATGTGGCCTGCAGTATaGCCCACAGCTTCTCCTGGAGGCTGCACAAACACA +
Preference number: 6 (lower is better)
Translates to: PGSRSGYMWPAV*PTASPGGCTNT
Trigger: TGTGTTTGTGCAGCCTCCAGGAGAAGCTGTGGGCCATACTGCAGGCCACATATATCCACTCCTGGAACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217398.3
CDS TCA 72 bp GTATGTAGGACTGCAGGGCACGGAGACCCTTGTAGGTaGACACAAACCGTGCCAGGTTCCAGGAGTGGATAT +
Preference number: 6 (lower is better)
Translates to: VCRTAGHGDPCR*TQTVPGSRSGY
Trigger: ATATCCACTCCTGGAACCTGGCACGGTTTGTGTTCACCTACAAGGGTCTCCGTGCCCTGCAGTCCTACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217398.3
ENST00000409299.8
CDS TCA 72 bp TACATGTTGATCTGCCATTCCGGAAGAGAAAGGTCATaGCCAGCGCGTGAGGGGCCCGGATTTTGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: YMLICHSGRERS*PAREGPGFWLH
Trigger: ATGGAGCCAAAATCCGGGCCCCTCACGCGCTGGTCATGACCTTTCTCTTCCGGAATGGCAGATCAACATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344022.7