Pregenerated sensors for PXMP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000176894Ensembl transcript IDs: ENST00000317479.8, ENST00000428960.3, ENST00000454379.2, ENST00000539093.2, ENST00000543589.5
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGAACAGAAGAGGCAAAGACGACCACTCGGGACACCCTTCTCTGTTaGTTCCTGAATCCCGAACTAGCAATGATTCAGGGTCATGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: RTEEAKTTTRDTLLC*FLNPELAMIQGHGQ Trigger: TTGCCCATGACCCTGAATCATTGCTAGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTCCCGAGTGGTCGTCTTTGCCTCTTCTGTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| 3UTR CAA 90 bp | ACGAACAGAAGAGGCAAAGACGACCACTCGGGACACCCTTCTCTGTaGCTTCCTGAATCCCGAACTAGCAATGATTCAGGGTCATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TNRRGKDDHSGHPSL*LPESRTSNDSGSWA Trigger: TGCCCATGACCCTGAATCATTGCTAGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTCCCGAGTGGTCGTCTTTGCCTCTTCTGTTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTATCCATCATTTTTGGGCATCTTGAATCACCTGATTTAGAGTCAGTGACATGGTTCTGCTCTCGCTaGGCGGGTGAGACCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SLSIIFGHLESPDLESVTWFCSR*AGETPR Trigger: TCTGGGGGTCTCACCCGCCCAGCGAGAGCAGAACCA...TGTCACTGACTCTAAATCAGGTGATTCAAGATGCCCAAAAATGATGGATAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000539093.2 |
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| 3UTR GCA 72 bp | GAGGCAAAGACGACCACTCGGGACACCCTTCTCTGTTaGTTCCTGAATCCCGAACTAGCAATGATTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: EAKTTTRDTLLC*FLNPELAMIQG Trigger: ACCCTGAATCATTGCTAGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTCCCGAGTGGTCGTCTTTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGCATTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTCTCTATCCATCATTTTaGGGCATCTTGAATCACCTG | + |
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Preference number: 3 (lower is better) Translates to: PALSFIVILIRSTVTIETLYPSF*GILNHL Trigger: CAGGTGATTCAAGATGCCCAAAAATGATGGATAGAG...AGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAATGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317479.8 |
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| CDS-3UTR TCA 90 bp | CACTCGGGACACCCTTCTCTGTTGCTTCCTGAATCCCGAACTAGCAATGATTCACTTGGCGGCGAAGGCTaGGGCGTCTTTCCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HSGHPSLLLPESRTSNDSLGGEG*GVFPLQ Trigger: CTGGAGGGGAAAGACGCCTCAGCCTTCGCCGCCAAG...TGAATCATTGCTAGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTCCCGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR TCA 90 bp | CTGAACGAACAGAAGAGGCAAAGACGACCACTCGGGACACCCTTCTCTGTTGCTAATGTTAGCAGAGGCTaGGCCCCGTGGCCCTCACCT | + |
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Preference number: 4 (lower is better) Translates to: LNEQKRQRRPLGTPFSVANVSRG*APWPSP Trigger: AGGTGAGGGCCACGGGGCTCAGCCTCTGCTAACATT...AGCAACAGAGAAGGGTGTCCCGAGTGGTCGTCTTTGCCTCTTCTGTTCGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR CCA 90 bp | GTTGGCGAAGAGCACCCGGAACTTCAGAGGGACGTAGTTGATGTTGATGAACTGACAGAGCTGCCAGGTTaGCGAAGAGCACCCGGAACT | + |
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Preference number: 4 (lower is better) Translates to: VGEEHPELQRDVVDVDELTELPG*RRAPGT Trigger: AGTTCCGGGTGCTCTTCGCCAACCTGGCAGCTCTGT...CAGTTCATCAACATCAACTACGTCCCTCTGAAGTTCCGGGTGCTCTTCGCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539093.2 |
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| 3UTR CAA 72 bp | AGAGGCAAAGACGACCACTCGGGACACCCTTCTCTGTaGCTTCCTGAATCCCGAACTAGCAATGATTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGKDDHSGHPSL*LPESRTSNDSG Trigger: CCCTGAATCATTGCTAGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTCCCGAGTGGTCGTCTTTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR TCA 90 bp | TCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTTGGTGGCCGCCTTGGTaGGCACCGGGTAGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SFIVILIRSTVTIETASTWWPPW*APGRAA Trigger: TGCGGCTCTACCCGGTGCTCACCAAGGCGGCCACCA...AGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR GCA 90 bp | GTTGGCGAAGAGCACCCGGAACTTCAGAGGGACGTAGTTGATGTTGATGAACTGATACCAGAACAGAGCTaGCAGGTTGGCGAAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGEEHPELQRDVVDVDELIPEQS*QVGEEH Trigger: GTGCTCTTCGCCAACCTGGCAGCTCTGTTCTGGTAT...CAGTTCATCAACATCAACTACGTCCCTCTGAAGTTCCGGGTGCTCTTCGCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539093.2 |
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| CDS-3UTR TCA 90 bp | TCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTCTTGGCGGCGAAGGCTaGGGCGTCTTTCCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SFIVILIRSTVTIETASTLGGEG*GVFPLQ Trigger: CTGGAGGGGAAAGACGCCTCAGCCTTCGCCGCCAAG...AGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317479.8 |
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| CDS-3UTR TCA 90 bp | GTTGGCGAAGAGCACCCGGAACTTCAGAGGGACGTAGTTGATGTTGATGAACTGGAGTCAGTGACATCCTaGCTGGATTGGTTCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VGEEHPELQRDVVDVDELESVTS*LDWFCS Trigger: AGAGCAGAACCAATCCAGTCAGGATGTCACTGACTC...CAGTTCATCAACATCAACTACGTCCCTCTGAAGTTCCGGGTGCTCTTCGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539093.2 |
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| CDS-3UTR TCA 90 bp | CCTGCATTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTTGGTGGCCGCCTTGGTaGGCACCGGGTAGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: PALSFIVILIRSTVTIETWWPPW*APGRAA Trigger: TGCGGCTCTACCCGGTGCTCACCAAGGCGGCCACCA...AGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAATGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR TCA 90 bp | GGCAAAGACGACCACTCGGGACACCCTTCTCTGTTGCTTCCTGAATCCCGAACTAAGGAAGGAAAAGGCTaGCAAAGTAATGTTAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GKDDHSGHPSLLLPESRTKEGKG*QSNVSR Trigger: TCTGCTAACATTACTTTGTCAGCCTTTTCCTTCCTT...AGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTCCCGAGTGGTCGTCTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR GCA 90 bp | GAACCTGCATTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAAAGCCTCCTGAGCCCTaGCAGGGGGACCTCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: EPALSFIVILIRSTVTIEKPPEP*QGDLRR Trigger: CCTCCTGAGGTCCCCCTGGCAGGGCTCAGGAGGCTT...TTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAATGCAGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317479.8 |
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| CDS-3UTR GCA 90 bp | CACTCGGGACACCCTTCTCTGTTGCTTCCTGAATCCCGAACTAGCAATGATTCAGACACCCTTCTCTGTTaGTTCCTGAATCCCGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: HSGHPSLLLPESRTSNDSDTLLC*FLNPEL Trigger: TAGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTC...TGAATCATTGCTAGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTCCCGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR CCA 90 bp | TTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGTGGTTCTGCTCTCGCTaGGCGGGTGAGACCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LSFIVILIRSTVTIETASWFCSR*AGETPR Trigger: TCTGGGGGTCTCACCCGCCCAGCGAGAGCAGAACCA...CGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| 3UTR CAA 72 bp | ATAGGCATCCCTGGCATGGGGGCTTTTAATGAGAATTaGCTGAACGAACAGAAGAGGCAAAGACGACCACTC | + |
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Preference number: 4 (lower is better) Translates to: IGIPGMGAFNEN*LNEQKRQRRPL Trigger: GAGTGGTCGTCTTTGCCTCTTCTGTTCGTTCAGCAAATTCTCATTAAAAGCCCCCATGCCAGGGATGCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR TCA 90 bp | TCTCTATCCATCATTTTTGGGCATCTTGAATCACCTGATTTAGAGTCAGTGACATGGGGCAGCACCACCTaGAGGCAGCGACTGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SLSIIFGHLESPDLESVTWGSTT*RQRLPF Trigger: AAAAGGCAGTCGCTGCCTTCAGGTGGTGCTGCCCCA...TGTCACTGACTCTAAATCAGGTGATTCAAGATGCCCAAAAATGATGGATAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000539093.2 |
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| CDS-3UTR GCA 90 bp | TTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGCATGAGGAAGGCCGGTaGAAAGACGAGGCGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSFIVILIRSTVTIETASHEEGR*KDEAVQ Trigger: CTGGACCGCCTCGTCTTTGCACCGGCCTTCCTCATG...CGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317479.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTAAATGGTTCTGCTCTCGCTaGGCGGGTGAGACCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FIVILIRSTVTIETASTKWFCSR*AGETPR Trigger: TCTGGGGGTCTCACCCGCCCAGCGAGAGCAGAACCA...TTTAGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR TCA 90 bp | TCTCTATCCATCATTTTTGGGCATCTTGAATCACCTGATTTAGAGTCAGTGACAGACTCAGCGGCCCTGTaGAGAAGAACCCGTAAACGG | + |
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Preference number: 4 (lower is better) Translates to: SLSIIFGHLESPDLESVTDSAAL*RRTRKR Trigger: CCGTTTACGGGTTCTTCTTCACAGGGCCGCTGAGTC...TGTCACTGACTCTAAATCAGGTGATTCAAGATGCCCAAAAATGATGGATAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317479.8 |
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| CDS-3UTR TCA 90 bp | ATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTAAATTTTGGGGCAGCACCACCTaGAGGCAGCGACTGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: IVILIRSTVTIETASTKFWGSTT*RQRLPF Trigger: AAAAGGCAGTCGCTGCCTTCAGGTGGTGCTGCCCCA...AAATTTAGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTAAATGGGGCAGCACCACCTaGAGGCAGCGACTGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: FIVILIRSTVTIETASTKWGSTT*RQRLPF Trigger: AAAAGGCAGTCGCTGCCTTCAGGTGGTGCTGCCCCA...TTTAGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR CCA 90 bp | ATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTAAATTTACAGAGCTGCCAGGTTaGCGAAGAGCACCCGGAACC | + |
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Preference number: 4 (lower is better) Translates to: IVILIRSTVTIETASTKFTELPG*RRAPGT Trigger: GGTTCCGGGTGCTCTTCGCCAACCTGGCAGCTCTGT...AAATTTAGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543589.5 |
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| CDS-3UTR GCA 90 bp | GATGAAACTAAGTCTAGCGGAAAACTACCAAAGAAAGAAGAGAAGAGAAAAGAACATGAGGAAGGCCGGTaGAAAGACGAGGCGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DETKSSGKLPKKEEKRKEHEEGR*KDEAVQ Trigger: CTGGACCGCCTCGTCTTTGCACCGGCCTTCCTCATG...TTCTTTTCTCTTCTCTTCTTTCTTTGGTAGTTTTCCGCTAGACTTAGTTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR GCA 90 bp | TCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTATACCAGAACAGAGCTaGCAGGTTGGCGAAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SFIVILIRSTVTIETASTIPEQS*QVGEEH Trigger: GTGCTCTTCGCCAACCTGGCAGCTCTGTTCTGGTAT...AGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR CCA 90 bp | GAACCTGCATTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACAGAGCTGCCAGGTTaGCGAAGAGCACCCGGAACT | + |
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Preference number: 4 (lower is better) Translates to: EPALSFIVILIRSTVTIETELPG*RRAPGT Trigger: AGTTCCGGGTGCTCTTCGCCAACCTGGCAGCTCTGT...TTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAATGCAGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317479.8 |
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| CDS-3UTR CCA 90 bp | CTTCTCTGTTGCTTCCTGAATCCCGAACTAGCAATGATTCAGGGTCATGGGCAAAATGATTCAGGGTCATaGGCAAAATCCAAGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LLCCFLNPELAMIQGHGQNDSGS*AKSKGS Trigger: ACTACCCTTGGATTTTGCCCATGACCCTGAATCATT...TTGCCCATGACCCTGAATCATTGCTAGTTCGGGATTCAGGAAGCAACAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR TCA 90 bp | CCTGCATTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGAAGTTCCCAAGTGCTaGCAAAATGCCACTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PALSFIVILIRSTVTIETEVPKC*QNATGG Trigger: GCCACCAGTGGCATTTTGTCAGCACTTGGGAACTTC...AGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAATGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTAAAGAAGTTCCCAAGTGCTaGCAAAATGCCACTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FIVILIRSTVTIETASTKEVPKC*QNATGG Trigger: GCCACCAGTGGCATTTTGTCAGCACTTGGGAACTTC...TTTAGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR GCA 90 bp | TCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTCCTGAAGGCAGCGACTaGCTTTTTAAAAGACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SFIVILIRSTVTIETASTPEGSD*LFKRQG Trigger: ACCCTGTCTTTTAAAAAGGCAGTCGCTGCCTTCAGG...AGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTAAAGAGTCAGTGACATCCTaGCTGGATTGGTTCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FIVILIRSTVTIETASTKESVTS*LDWFCS Trigger: AGAGCAGAACCAATCCAGTCAGGATGTCACTGACTC...TTTAGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR TCA 90 bp | CCTGCATTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGAGTCAGTGACATCCTaGCTGGATTGGTTCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PALSFIVILIRSTVTIETESVTS*LDWFCS Trigger: AGAGCAGAACCAATCCAGTCAGGATGTCACTGACTC...AGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAATGCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR GCA 90 bp | TCTCTATCCATCATTTTTGGGCATCTTGAATCACCTGATTTAGAGTCAGTGACACCTGAAGGCAGCGACTaGCTTTTTAAAAGACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SLSIIFGHLESPDLESVTPEGSD*LFKRQG Trigger: ACCCTGTCTTTTAAAAAGGCAGTCGCTGCCTTCAGG...TGTCACTGACTCTAAATCAGGTGATTCAAGATGCCCAAAAATGATGGATAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000539093.2 |
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| CDS-3UTR GCA 90 bp | CCTGCATTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTCCTGAAGGCAGCGACTaGCTTTTTAAAAGACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: PALSFIVILIRSTVTIETPEGSD*LFKRQG Trigger: ACCCTGTCTTTTAAAAAGGCAGTCGCTGCCTTCAGG...AGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAATGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR TCA 90 bp | ATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTAAATTTGGATCCAATGTTCCATaGAGAAGTAGAAGAAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: IVILIRSTVTIETASTKFGSNVP*RSRRSD Trigger: GTCACTTCTTCTACTTCTTCATGGAACATTGGATCC...AAATTTAGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317479.8 |
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| CDS GCA 90 bp | GGCCGGTGCAAAGACGAGGCGGTCCAGGAGAAGCCTCCTGAGCCCTaGCAGGGGGACCTCAGGAGGGATCCAATGTTCCATGAAGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: GRCKDEAVQEKPPEP*QGDLRRDPMFHEEV Trigger: TACTTCTTCATGGAACATTGGATCCCTCCTGAGGTCCCCCTGGCAGGGCTCAGGAGGCTTCTCCTGGACCGCCTCGTCTTTGCACCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000428960.3 |
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| CDS-3UTR CAA 90 bp | GTTGGCGAAGAGCACCCGGAACTTCAGAGGGACGTAGTTGATGTTGATGAACTGGACATCCTGACTGGATaGGTTCTGCTCTCGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VGEEHPELQRDVVDVDELDILTG*VLLSLG Trigger: GCCCAGCGAGAGCAGAACCAATCCAGTCAGGATGTC...CAGTTCATCAACATCAACTACGTCCCTCTGAAGTTCCGGGTGCTCTTCGCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539093.2 |
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| CDS-3UTR CAA 90 bp | GAACGAACAGAAGAGGCAAAGACGACCACTCGGGACACCCTTCTCTGTTGCTTCGGACACCCTTCTCTGTaGCTTCCTGAATCCCGAACT | + |
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Preference number: 5 (lower is better) Translates to: ERTEEAKTTTRDTLLCCFGHPSL*LPESRT Trigger: AGTTCGGGATTCAGGAAGCAACAGAGAAGGGTGTCC...GAAGCAACAGAGAAGGGTGTCCCGAGTGGTCGTCTTTGCCTCTTCTGTTCGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454379.2 |
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| CDS-3UTR CAA 90 bp | TCTCTATCCATCATTTTTGGGCATCTTGAATCACCTGATTTAGAGTCAGTGACAAACAGAGCTGCCAGGTaGGCGAAGAGCACCCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SLSIIFGHLESPDLESVTNRAAR*AKSTRN Trigger: GTTCCGGGTGCTCTTCGCCAACCTGGCAGCTCTGTT...TGTCACTGACTCTAAATCAGGTGATTCAAGATGCCCAAAAATGATGGATAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000539093.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCGAAGAGCACCCGGAACTTCAGAGGGACGTAGTTGATGTTGATGAACTGCTCTATCCATCATTTTaGGGCATCTTGAATCACCTG | + |
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Preference number: 5 (lower is better) Translates to: VGEEHPELQRDVVDVDELLYPSF*GILNHL Trigger: CAGGTGATTCAAGATGCCCAAAAATGATGGATAGAG...CAGTTCATCAACATCAACTACGTCCCTCTGAAGTTCCGGGTGCTCTTCGCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539093.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGACTAAAAACAGAGCTGCCAGGTaGGCGAAGAGCACCCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: FIVILIRSTVTIETASTKNRAAR*AKSTRN Trigger: GTTCCGGGTGCTCTTCGCCAACCTGGCAGCTCTGTT...TTTAGTCGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR CAA 90 bp | GAACCTGCATTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAAACAGAGCTGCCAGGTaGGCGAAGAGCACCCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: EPALSFIVILIRSTVTIENRAAR*AKSTRN Trigger: GTTCCGGGTGCTCTTCGCCAACCTGGCAGCTCTGTT...TTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAATGCAGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS-3UTR CAA 90 bp | TCTCTATCCATCATTTTTGGGCATCTTGAATCACCTGATTTAGAGTCAGTGACAGACATCCTGACTGGATaGGTTCTGCTCTCGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SLSIIFGHLESPDLESVTDILTG*VLLSLG Trigger: GCCCAGCGAGAGCAGAACCAATCCAGTCAGGATGTC...TGTCACTGACTCTAAATCAGGTGATTCAAGATGCCCAAAAATGATGGATAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000539093.2 |
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| CDS-3UTR CAA 90 bp | TTATCGTTTATTGTGATCCTAATTCGGTCCACAGTAACAATTGAAACTGCCTCGCTCTATCCATCATTTTaGGGCATCTTGAATCACCTG | + |
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Preference number: 5 (lower is better) Translates to: LSFIVILIRSTVTIETASLYPSF*GILNHL Trigger: CAGGTGATTCAAGATGCCCAAAAATGATGGATAGAG...CGAGGCAGTTTCAATTGTTACTGTGGACCGAATTAGGATCACAATAAACGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS GCA 72 bp | AAAGACGAGGCGGTCCAGGAGAAGCCTCCTGAGCCCTaGCAGGGGGACCTCAGGAGGGATCCAATGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: KDEAVQEKPPEP*QGDLRRDPMFH Trigger: ATGGAACATTGGATCCCTCCTGAGGTCCCCCTGGCAGGGCTCAGGAGGCTTCTCCTGGACCGCCTCGTCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000428960.3 |
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| CDS TCA 72 bp | CAAGTGCTGACAAAATGCCACTGGTGGCCGCCTTGGTaGGCACCGGGTAGAGCCGCAGGAAGAGCAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: QVLTKCHWWPPW*APGRAAGRAGT Trigger: AGTACCTGCTCTTCCTGCGGCTCTACCCGGTGCTCACCAAGGCGGCCACCAGTGGCATTTTGTCAGCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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| CDS TCA 72 bp | CTTCTCAATCATCTGGGCCAGGAAGTTCCCAAGTGCTaGCAAAATGCCACTGGTGGCCGCCTTGGTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLNHLGQEVPKC*QNATGGRLGEH Trigger: GTGCTCACCAAGGCGGCCACCAGTGGCATTTTGTCAGCACTTGGGAACTTCCTGGCCCAGATGATTGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317479.8 ENST00000543589.5 |
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