RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PXK (Homo sapiens)

Ensembl gene IDs: ENSG00000168297

Ensembl transcript IDs: ENST00000302779.9, ENST00000356151.7, ENST00000383715.8, ENST00000383716.7, ENST00000459676.6, ENST00000463280.5, ENST00000468776.5, ENST00000477308.5, ENST00000479134.5, ENST00000479241.5, ENST00000484288.5, ENST00000491164.1, ENST00000493474.1, ENST00000495557.5

Found 675 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGACAAAACTGACCCTATGGACGGGCTCCCTGAGGAGAGAGGCCTaGCAGGACGGGACCCCTGGGCCACGGCGCATTTGTGTTGTTCAG +
Preference number: 1 (lower is better)
Translates to: VTKLTLWTGSLRREA*QDGTPGPRRICVVQ
Trigger: CTGAACAACACAAATGCGCCGTGGCCCAGGGGTCCCGTCCTGCCAGGCCTCTCTCCTCAGGGAGCCCGTCCATAGGGTCAGTTTTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR CCA 90 bp ATGGACGGGCTCCCTGAGGAGAGAGGCCTGGCAGGACGGGACCCCTaGGCCACGGCGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGA +
Preference number: 1 (lower is better)
Translates to: MDGLPEERGLAGRDP*ATAHLCCSAKHVPR
Trigger: TCTTGGTACATGCTTAGCTGAACAACACAAATGCGCCGTGGCCCAGGGGTCCCGTCCTGCCAGGCCTCTCTCCTCAGGGAGCCCGTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR TCA 90 bp TTCACACAGCTTGTAGGAACCCTTCCAGGCACAGCCAGCAAGCTCTaGGTGGCAGAAGCAGCTCCTCGCACATCTGGAACAACTGGTTCA +
Preference number: 1 (lower is better)
Translates to: FTQLVGTLPGTASKL*VAEAAPRTSGTTGS
Trigger: TGAACCAGTTGTTCCAGATGTGCGAGGAGCTGCTTCTGCCACTCAGAGCTTGCTGGCTGTGCCTGGAAGGGTTCCTACAAGCTGTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR GCA 90 bp GTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCTGAGAAGCTCTaGATGAAGCTTTTCAGCAAAGACAGCAAGCTGGAGCCCGGGGGT +
Preference number: 1 (lower is better)
Translates to: VQLSMYQDRLQSEKL*MKLFSKDSKLEPGG
Trigger: ACCCCCGGGCTCCAGCTTGCTGTCTTTGCTGAAAAGCTTCATGCAGAGCTTCTCAGATTGGAGCCTGTCTTGGTACATGCTTAGCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR TCA 90 bp CCTCCAAGTGTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTC +
Preference number: 1 (lower is better)
Translates to: PPSVNRKLQPIFGAL*SQVLAFLKVPFWKF
Trigger: GAATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTACACTTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR TCA 90 bp CATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCTaGGAAGCTCTGCATGAAGCTTTTCAGCAAAGACAGCAAGCTGGA +
Preference number: 1 (lower is better)
Translates to: HLCCSAKHVPRQAPI*EALHEAFQQRQQAG
Trigger: TCCAGCTTGCTGTCTTTGCTGAAAAGCTTCATGCAGAGCTTCTCAGATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR TCA 90 bp TTAATAATGAATATGGGATCAACTCATATACCAACTCCCTGCCAATaGTTCTCCCTTCACACAGCTTGTAGGAACCCTTCCAGGCACAGC +
Preference number: 1 (lower is better)
Translates to: LIMNMGSTHIPTPCQ*FSLHTACRNPSRHS
Trigger: GCTGTGCCTGGAAGGGTTCCTACAAGCTGTGTGAAGGGAGAATCATTGGCAGGGAGTTGGTATATGAGTTGATCCCATATTCATTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR TCA 90 bp AATATTTGCCGTCCATATGTTTTTATTTGCTGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAGTACTTCTTTAGAAATGGGTCTTTT +
Preference number: 1 (lower is better)
Translates to: NICRPYVFICWSSRP*IFLGLQYFFRNGSF
Trigger: AAAAGACCCATTTCTAAAGAAGTACTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCAGCAAATAAAAACATATGGACGGCAAATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR GCA 90 bp TGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTGGCTGTACTGGCTCAGCAATTACTT +
Preference number: 1 (lower is better)
Translates to: CLKNYFSRKAAYMSI*KIVLFVAVLAQQLL
Trigger: AAGTAATTGCTGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
3UTR TCA 90 bp TCTCATTCTAAAAGTTACCTTATCTCACGCAAACTTACTACTGTATaGGACAGCACCCATTTAAACACAGATAAATTAGAGAATTCCCCC +
Preference number: 1 (lower is better)
Translates to: SHSKSYLISRKLTTV*DSTHLNTDKLENSP
Trigger: GGGGGAATTCTCTAATTTATCTGTGTTTAAATGGGTGCTGTCTCATACAGTAGTAAGTTTGCGTGAGATAAGGTAACTTTTAGAATGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR GCA 90 bp CAGCCTAACTTTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACT +
Preference number: 1 (lower is better)
Translates to: QPNFILLKELFLSKS*LHEHLQNSTVCGCT
Trigger: AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAAAGTTAGGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
3UTR TCA 90 bp TCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGTaGACGTTCCCCATTCTATTTGAGGAGAAAACAAAGAACTCAGTT +
Preference number: 1 (lower is better)
Translates to: SITTMVFLLELKRML*TFPILFEEKTKNSV
Trigger: AACTGAGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAACGTTCACAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR GCA 90 bp GCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAGATACGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: ARELLVVVEVEEVEVMQIRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...TATCTGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR TCA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCTGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 2 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR GCA 90 bp GCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAGATAAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 2 (lower is better)
Translates to: ARELLVVVEVEEVEVMQIRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...TATCTGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR CCA 90 bp ACACGGCCACCACAGCCATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: TRPPQPWTGQEGRSPQAPKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...CGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCATGGCTGTGGTGGCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR GCA 90 bp TCCAAGTGTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: SKCKQEASADLRSTVITGGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...ACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTACACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR CCA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCGCTGTCCCAAAAGCCTaGCCATTAGAGGATAAACAA +
Preference number: 2 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGAVPKA*PLEDKQ
Trigger: TTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGC...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
3UTR-3UTR CCA 90 bp GCCACGGCGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCGCCCGCTCCTCCTGTTaGCGGACAGGAAGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: ATAHLCCSAKHVPRQAPIARSSC*RTGRWH
Trigger: ATGCCACCTTCCTGTCCGCCAACAGGAGGAGCGGGC...GATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCGCCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR CCA 90 bp TCTGAGTGGCAGAAGCAGCTCCTCGCACATCTGGAACAACTGGTTCATTTAAGACTGAGGAGAGAGGCCTaGCAGGACGGGACCCCTGGG +
Preference number: 2 (lower is better)
Translates to: SEWQKQLLAHLEQLVHLRLRREA*QDGTPG
Trigger: CCCAGGGGTCCCGTCCTGCCAGGCCTCTCTCCTCAG...TCTTAAATGAACCAGTTGTTCCAGATGTGCGAGGAGCTGCTTCTGCCACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR CCA 90 bp CAGCAGCCGGCAAGTGTCCCCATCGAGCATCACATTGGAGGCGTGAAGATGCCCCCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: QQPASVPIEHHIGGVKMPPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...GGGCATCTTCACGCCTCCAATGTGATGCTCGATGGGGACACTTGCCGGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CCA 90 bp CGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCTGAGAAGGCTGGAGCCCGGGGGTaGCTAGTGGCCCTGAAACCG +
Preference number: 2 (lower is better)
Translates to: RICVVQLSMYQDRLQSEKAGARG*LVALKP
Trigger: CGGTTTCAGGGCCACTAGCCACCCCCGGGCTCCAGC...CTTCTCAGATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR GCA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTCGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
3UTR-3UTR TCA 90 bp GGCATCTGTAAGAGCCGGGAGATGGTAGGCATGCCATTTTTACAGGCTTCACAAATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: GICKSREMVGMPFLQASQMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...TTGTGAAGCCTGTAAAAATGGCATGCCTACCATCTCCCGGCTCTTACAGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR TCA 90 bp GAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 2 (lower is better)
Translates to: EASADLRSTVITGFGFPQNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...TTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR TCA 90 bp TCCAAGTGTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 2 (lower is better)
Translates to: SKCKQEASADLRSTVITGNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...ACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTACACTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR TCA 90 bp TCCTCCCATGGACCAGGTACTTTGCTACCCAAAACAGGCCCTAGAACATTCAGCCCGGTCCATTCCCTGTaGAAGCCGAGCTTGGAAATC +
Preference number: 2 (lower is better)
Translates to: SSHGPGTLLPKTGPRTFSPVHSL*KPSLEI
Trigger: GATTTCCAAGCTCGGCTTTCACAGGGAATGGACCGG...GCTGAATGTTCTAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCCATGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR GCA 90 bp AAAACATCGCTGAATAATGGCATCTGTAAGAGCCGGGAGATGGTAGGCATGCCAAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 2 (lower is better)
Translates to: KTSLNNGICKSREMVGMPRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...TGGCATGCCTACCATCTCCCGGCTCTTACAGATGCCATTATTCAGCGATGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR TCA 90 bp AAAACATCGCTGAATAATGGCATCTGTAAGAGCCGGGAGATGGTAGGCATGCCAATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: KTSLNNGICKSREMVGMPMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...TGGCATGCCTACCATCTCCCGGCTCTTACAGATGCCATTATTCAGCGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR TCA 90 bp AGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 2 (lower is better)
Translates to: SRSSEHCDHRFWLSSKFLNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...AAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR CCA 90 bp GTAGGCATGCCATTTTTACAGGCTTCACAAGACAGCGTAGACTCCAACACGGCCCATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 2 (lower is better)
Translates to: VGMPFLQASQDSVDSNTAHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...GGCCGTGTTGGAGTCTACGCTGTCTTGTGAAGCCTGTAAAAATGGCATGCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CCA 90 bp GGAGGTAATGCAGATATCCCTGATGTAGAGGGTGGAGTTGGCGATGACGGGGACAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: GGNADIPDVEGGVGDDGDKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...GTCCCCGTCATCGCCAACTCCACCCTCTACATCAGGGATATCTGCATTACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CCA 90 bp AAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 2 (lower is better)
Translates to: KQEASADLRSTVITGFGFHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...AAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR TCA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
3UTR-3UTR TCA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: LRSTVITGFGFPQSSFLEMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR TCA 90 bp CCCATGGACCAGGTACTTTGCTACCCAAAACAGGCCCTAGAACATTCAGCAGTAGCATTTGAGTGGAGCTaGAGAATGCTCTTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PMDQVLCYPKQALEHSAVAFEWS*RMLLAA
Trigger: AGCTGCCAAGAGCATTCTTCAGCTCCACTCAAATGC...TACTGCTGAATGTTCTAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR CCA 90 bp GTAGGCATGCCATTTTTACAGGCTTCACAAGACAGCGTAGACTCCAACACGGCCCCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: VGMPFLQASQDSVDSNTAPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...GGCCGTGTTGGAGTCTACGCTGTCTTGTGAAGCCTGTAAAAATGGCATGCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR TCA 90 bp AAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTTTTCTAGGAGCTGTCTaGTGGGGTAGAAGGGATTGC +
Preference number: 2 (lower is better)
Translates to: KQEASADLRSTVITGFGFFLGAV*WGRRDC
Trigger: GCAATCCCTTCTACCCCATCAGACAGCTCCTAGAAA...AAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
3UTR-3UTR TCA 90 bp GGTAGGCATGCCATTTTTACAGGCTTCACAAGACAGCGTAGACTCCAACACGGCGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 2 (lower is better)
Translates to: GRHAIFTGFTRQRRLQHGGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...GCCGTGTTGGAGTCTACGCTGTCTTGTGAAGCCTGTAAAAATGGCATGCCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR TCA 90 bp TCTGAGTGGCAGAAGCAGCTCCTCGCACATCTGGAACAACTGGTTCATTTAAGACTGCTATCTAACCCCTaGAATTGTTGGGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: SEWQKQLLAHLEQLVHLRLLSNP*NCWAKA
Trigger: TGCCTTGGCCCAACAATTTCAGGGGTTAGATAGCAG...TCTTAAATGAACCAGTTGTTCCAGATGTGCGAGGAGCTGCTTCTGCCACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR GCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
3UTR-3UTR GCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
3UTR-3UTR GCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAACGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
3UTR-3UTR CCA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LRSTVITGFGFPQSSFLERKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR CCA 90 bp ATAAATTGTAAATTCCCAAAGGCATTTAGAGATAAGAACCGGCAGTCAAGTGAGGCAGGACGGGACCCCTaGGCCACGGCGCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: INCKFPKAFRDKNRQSSEAGRDP*ATAHLC
Trigger: ACACAAATGCGCCGTGGCCCAGGGGTCCCGTCCTGC...CTCACTTGACTGCCGGTTCTTATCTCTAAATGCCTTTGGGAATTTACAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR TCA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 2 (lower is better)
Translates to: LRSTVITGFGFPQSSFLEDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR TCA 90 bp GCTGTGTTAGTTATTAATAATGAATATGGGATCAACTCATATACCAACTCCCTGTATGGACGGGCTCCCTaGGGAGAGAGGCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: AVLVINNEYGINSYTNSLYGRAP*GERPGR
Trigger: CCTGCCAGGCCTCTCTCCTCAGGGAGCCCGTCCATA...CAGGGAGTTGGTATATGAGTTGATCCCATATTCATTATTAATAACTAACACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR CCA 90 bp TTTTATTTGCTGGAGTTCCAGGCCCTGAATCTTCTTAGGGTTGCAGTACTTCTTAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 2 (lower is better)
Translates to: FYLLEFQALNLLRVAVLLRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...AAGAAGTACTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCAGCAAATAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CCA 90 bp TCCAAGTGTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTGTTTGTGGCTGTACTaGCTCAGCAATTACTTTCCC +
Preference number: 2 (lower is better)
Translates to: SKCKQEASADLRSTVITGCLWLY*LSNYFP
Trigger: GGGAAAGTAATTGCTGAGCCAGTACAGCCACAAACA...ACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTACACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
3UTR CAA 90 bp CTGACAAAGATAAGGACAAGAATATCCTCCCATGGACCAGGTACTTaGCTACCCAAAACAGGCCCTAGAACATTCAGCAGTAAGGCACCA +
Preference number: 2 (lower is better)
Translates to: LTKIRTRISSHGPGT*LPKTGPRTFSSKAP
Trigger: TGGTGCCTTACTGCTGAATGTTCTAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCCATGGGAGGATATTCTTGTCCTTATCTTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR GCA 90 bp GAATGCTCTTCACTATTTTCAAGAGCAGATCGTTTTGACTTCTTTCGAGCTAAAAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 2 (lower is better)
Translates to: ECSSLFSRADRFDFFRAKRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...TTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTGAAAATAGTGAAGAGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CCA 90 bp ATATTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 2 (lower is better)
Translates to: IFQYAAVPKAWPLEDKQDRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...GTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR CCA 90 bp AGGAGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAAAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 2 (lower is better)
Translates to: RSKILREQCQPNFILLKERKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...TTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
3UTR-3UTR TCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACATTTCTAGGAGCTGTCTaGTGGGGTAGAAGGGATTGC +
Preference number: 2 (lower is better)
Translates to: KNYGSRVVALAALSSITTFLGAV*WGRRDC
Trigger: GCAATCCCTTCTACCCCATCAGACAGCTCCTAGAAA...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR TCA 90 bp GGCATCTGTAAGAGCCGGGAGATGGTAGGCATGCCATTTTTACAGGCTTCACAAAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 2 (lower is better)
Translates to: GICKSREMVGMPFLQASQSRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...TTGTGAAGCCTGTAAAAATGGCATGCCTACCATCTCCCGGCTCTTACAGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468776.5
3UTR-3UTR CCA 90 bp TCTCTCATTCTAAAAGTTACCTTATCTCACGCAAACTTACTACTGTATGAGACAGCAAAGACAGCAAGCTaGAGCCCGGGGGTGGCTAGT +
Preference number: 2 (lower is better)
Translates to: SLILKVTLSHANLLLYETAKTAS*SPGVAS
Trigger: ACTAGCCACCCCCGGGCTCCAGCTTGCTGTCTTTGC...TGTCTCATACAGTAGTAAGTTTGCGTGAGATAAGGTAACTTTTAGAATGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR TCA 90 bp AAAGATAAGGACAAGAATATCCTCCCATGGACCAGGTACTTTGCTACCCAAAACAAATCAGAAACGCAGTaGCTCTTTCACTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: KDKDKNILPWTRYFATQNKSETQ*LFHSST
Trigger: GGTGGAGGAGTGAAAGAGTCACTGCGTTTCTGATTT...GTTTTGGGTAGCAAAGTACCTGGTCCATGGGAGGATATTCTTGTCCTTATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR GCA 90 bp AGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAA +
Preference number: 2 (lower is better)
Translates to: SRSSEHCDHRFWLSSKFLFLSKS*LHEHLQ
Trigger: TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA...AAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
3UTR-3UTR TCA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: LTKKNYGSRVVALAALSSIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
3UTR-3UTR TCA 90 bp ATAAATTGTAAATTCCCAAAGGCATTTAGAGATAAGAACCGGCAGTCAAGTGAGCCAACTCCCTGCCAATaGTTCTCCCTTCACACAGCT +
Preference number: 2 (lower is better)
Translates to: INCKFPKAFRDKNRQSSEPTPCQ*FSLHTA
Trigger: AGCTGTGTGAAGGGAGAATCATTGGCAGGGAGTTGG...CTCACTTGACTGCCGGTTCTTATCTCTAAATGCCTTTGGGAATTTACAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR GCA 90 bp AAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 2 (lower is better)
Translates to: KQEASADLRSTVITGFGFAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...AAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
3UTR-3UTR GCA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAAATATTTCAATATGCTaGTGTCCCAAAAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LRSTVITGFGFPQSSFLENISIC*CPKSLA
Trigger: GGCCAGGCTTTTGGGACAGCAGCATATTGAAATATT...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
3UTR-3UTR CCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 2 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
3UTR-3UTR CCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAGCTGTCCCAAAAGCCTaGCCATTAGAGGATAAACAA +
Preference number: 2 (lower is better)
Translates to: KNYGSRVVALAALSSITTAVPKA*PLEDKQ
Trigger: TTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGC...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR TCA 90 bp GAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTCTGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 2 (lower is better)
Translates to: EHCDHRFWLSSKFLFGNSGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...AGAATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CCA 90 bp AGGAGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATGTTTGTGGCTGTACTaGCTCAGCAATTACTTTCCC +
Preference number: 2 (lower is better)
Translates to: RSKILREQCQPNFILLKECLWLY*LSNYFP
Trigger: GGGAAAGTAATTGCTGAGCCAGTACAGCCACAAACA...TTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
3UTR-3UTR TCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAGTTCCCCATTCTATTTaGGGAGAAAACAAAGAACTC +
Preference number: 2 (lower is better)
Translates to: KNYGSRVVALAALSSITTVPHSI*GENKEL
Trigger: GAGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAAC...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR TCA 90 bp GAATGCTCTTCACTATTTTCAAGAGCAGATCGTTTTGACTTCTTTCGAGCTAAAATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: ECSSLFSRADRFDFFRAKIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...TTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTGAAAATAGTGAAGAGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR TCA 90 bp GAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTCTGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 2 (lower is better)
Translates to: EHCDHRFWLSSKFLFGNSVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...AGAATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR GCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAAATATTTCAATATGCTaGTGTCCCAAAAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRNISIC*CPKSLA
Trigger: GGCCAGGCTTTTGGGACAGCAGCATATTGAAATATT...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR CCA 90 bp GCTGTGTTAGTTATTAATAATGAATATGGGATCAACTCATATACCAACTCCCTGTGTGAAAGCCGAGCTTaGAAATCTAGCCCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: AVLVINNEYGINSYTNSLCESRA*KSSPSA
Trigger: AGCTGAGGGGCTAGATTTCCAAGCTCGGCTTTCACA...CAGGGAGTTGGTATATGAGTTGATCCCATATTCATTATTAATAACTAACACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR TCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACACTTAAGAGAATGTTGTaGACGTTCCCCATTCTATTT +
Preference number: 2 (lower is better)
Translates to: KNYGSRVVALAALSSITTLKRML*TFPILF
Trigger: AAATAGAATGGGGAACGTTCACAACATTCTCTTAAG...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR GCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 2 (lower is better)
Translates to: KAAYMSICKIVLFVAVLAAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
3UTR-3UTR GCA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTTTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAA +
Preference number: 2 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTFLSKS*LHEHLQ
Trigger: TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
3UTR-3UTR GCA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATCTTAAGGGAGCAATaGCAGCCTAACTTTATTCTG +
Preference number: 2 (lower is better)
Translates to: LTKKNYGSRVVALAALSSILREQ*QPNFIL
Trigger: CAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGAT...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR GCA 90 bp ATATTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACATCTTAAGGGAGCAATaGCAGCCTAACTTTATTCTG +
Preference number: 2 (lower is better)
Translates to: IFQYAAVPKAWPLEDKQDILREQ*QPNFIL
Trigger: CAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGAT...GTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR GCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTATGGGGTAGAAGGGATTaGAACACAAAGGCCATTTAC +
Preference number: 2 (lower is better)
Translates to: SKILREQCQPNFILLKELWGRRD*NTKAIY
Trigger: GTAAATGGCCTTTGTGTTGCAATCCCTTCTACCCCA...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR GCA 90 bp TCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATCACAATGACATTCTCTaGATAGTAACCAACACTGAT +
Preference number: 2 (lower is better)
Translates to: SEHCDHRFWLSSKFLFGNHNDIL*IVTNTD
Trigger: ATCAGTGTTGGTTACTATGCAGAGAATGTCATTGTG...ATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
3UTR-3UTR GCA 90 bp CTGGAACAACTGGTTCATTTAAGAAGCAAAAGGAGATACTGGTGTCCCAATTGTACAGAGTCAAATCGTTaGCAGAAAATCAGAAACGCA +
Preference number: 2 (lower is better)
Translates to: LEQLVHLRSKRRYWCPNCTESNR*QKIRNA
Trigger: TGCGTTTCTGATTTTCTGGCAACGATTTGACTCTGT...ACAATTGGGACACCAGTATCTCCTTTTGCTTCTTAAATGAACCAGTTGTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR CCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTATGTTTGTGGCTGTACTaGCTCAGCAATTACTTTCCC +
Preference number: 2 (lower is better)
Translates to: SKILREQCQPNFILLKELCLWLY*LSNYFP
Trigger: GGGAAAGTAATTGCTGAGCCAGTACAGCCACAAACA...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
3UTR-3UTR TCA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTGGCCATTTACTGCTGTaGTTGAATATTGTCATTGTT +
Preference number: 2 (lower is better)
Translates to: LTKKNYGSRVVALAALSSGHLLL*LNIVIV
Trigger: AACAATGACAATATTCAATCACAGCAGTAAATGGCC...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR TCA 90 bp ATAAATTGTAAATTCCCAAAGGCATTTAGAGATAAGAACCGGCAGTCAAGTGAGAATTTGCACTCCCACTaGTTTCTCTTGAGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: INCKFPKAFRDKNRQSSENLHSH*FLLRKL
Trigger: CAGCTTTCTCAAGAGAAATCAGTGGGAGTGCAAATT...CTCACTTGACTGCCGGTTCTTATCTCTAAATGCCTTTGGGAATTTACAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR GCA 90 bp ATATTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 2 (lower is better)
Translates to: IFQYAAVPKAWPLEDKQDAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...GTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR GCA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTGAAAATATTTCAATATaGTGCTGTCCCAAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: LTKKNYGSRVVALAALSSENISI*CCPKSL
Trigger: CAGGCTTTTGGGACAGCAGCATATTGAAATATTTTC...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR CCA 90 bp TCTCTCATTCTAAAAGTTACCTTATCTCACGCAAACTTACTACTGTATGAGACAAAGAATATCCTCCCATaGACCAGGTACTTTGCTACC +
Preference number: 2 (lower is better)
Translates to: SLILKVTLSHANLLLYETKNILP*TRYFAT
Trigger: GGTAGCAAAGTACCTGGTCCATGGGAGGATATTCTT...TGTCTCATACAGTAGTAAGTTTGCGTGAGATAAGGTAACTTTTAGAATGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR GCA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGGAAAATATTTCAATATaGTGCTGTCCCAAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: ALSSITTMVFLLELKRMLENISI*CCPKSL
Trigger: CAGGCTTTTGGGACAGCAGCATATTGAAATATTTTC...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR GCA 90 bp ATAAATTGTAAATTCCCAAAGGCATTTAGAGATAAGAACCGGCAGTCAAGTGAGATGACACTGCTAATTTaGACTCCCACTGATTTCTCT +
Preference number: 2 (lower is better)
Translates to: INCKFPKAFRDKNRQSSEMTLLI*TPTDFS
Trigger: AGAGAAATCAGTGGGAGTGCAAATTAGCAGTGTCAT...CTCACTTGACTGCCGGTTCTTATCTCTAAATGCCTTTGGGAATTTACAATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR CAA 90 bp TTTAAATATTCAGATAAGGAAATAGTCTCAAATCTGCTTTCCCACTaGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCAC +
Preference number: 2 (lower is better)
Translates to: FKYSDKEIVSNLLSH*FITSAIETLWVLFH
Trigger: GTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTATTTCCTTATCTGAATATTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
3UTR-3UTR TCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTAGGCCATTTACTGCTGTaGTTGAATATTGTCATTGTT +
Preference number: 2 (lower is better)
Translates to: SKILREQCQPNFILLKELGHLLL*LNIVIV
Trigger: AACAATGACAATATTCAATCACAGCAGTAAATGGCC...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR GCA 72 bp CATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: HAIHSLRRELGR*LGARRRQGSCW
Trigger: CCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR CAA 90 bp AGCTTTTCAGCAAAGACAGCAAGCTGGAGCCCGGGGGTGGCTAGTGGCCCTGAAAGCCCGCTCCTCCTGTaGGCGGACAGGAAGGTGGCA +
Preference number: 3 (lower is better)
Translates to: SFSAKTASWSPGVASGPESPLLL*ADRKVA
Trigger: TGCCACCTTCCTGTCCGCCAACAGGAGGAGCGGGCT...TTCAGGGCCACTAGCCACCCCCGGGCTCCAGCTTGCTGTCTTTGCTGAAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR CCA 72 bp CTCCCTGAGGAGAGAGGCCTGGCAGGACGGGACCCCTaGGCCACGGCGCATTTGTGTTGTTCAGCTAAGCAT +
Preference number: 3 (lower is better)
Translates to: LPEERGLAGRDP*ATAHLCCSAKH
Trigger: ATGCTTAGCTGAACAACACAAATGCGCCGTGGCCCAGGGGTCCCGTCCTGCCAGGCCTCTCTCCTCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR CAA 90 bp ATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 3 (lower is better)
Translates to: MDGAGGKESTGTESGGRPLSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...TGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468776.5
3UTR-3UTR CAA 90 bp ATCCCTGATGTAGAGGGTGGAGTTGGCGATGACGGGGACGTGAGAGGTGAGCTGTCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: IPDVEGGVGDDGDVRGELSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...CAGCTCACCTCTCACGTCCCCGTCATCGCCAACTCCACCCTCTACATCAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CAA 90 bp GCAGATATCCCTGATGTAGAGGGTGGAGTTGGCGATGACGGGGACGTGAGAGGTATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 3 (lower is better)
Translates to: ADIPDVEGGVGDDGDVRGMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...ACCTCTCACGTCCCCGTCATCGCCAACTCCACCCTCTACATCAGGGATATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR TCA 72 bp TCCTCAAAGTTCCTTTTTGGAAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCATGCCATTCACAGCCT +
Preference number: 3 (lower is better)
Translates to: SSKFLFGNSGWS*ARPLGSCHSQP
Trigger: AGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR TCA 72 bp TGTACCAAGACAGGCTCCAATCTGAGAAGCTCTGCATaGAGCTTTTCAGCAAAGACAGCAAGCTGGAGCCCG +
Preference number: 3 (lower is better)
Translates to: CTKTGSNLRSSA*SFSAKTASWSP
Trigger: CGGGCTCCAGCTTGCTGTCTTTGCTGAAAAGCTTCATGCAGAGCTTCTCAGATTGGAGCCTGTCTTGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR CAA 90 bp GCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAGATACAAAGTAACTATGCTTaGGGCTATAGTGTTAATGTC +
Preference number: 3 (lower is better)
Translates to: ARELLVVVEVEEVEVMQIQSNYA*GYSVNV
Trigger: GACATTAACACTATAGCCCAAAGCATAGTTACTTTG...TATCTGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
3UTR-3UTR CAA 90 bp GGAGGTAATGCAGATATCCCTGATGTAGAGGGTGGAGTTGGCGATGACGGGGACCCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 3 (lower is better)
Translates to: GGNADIPDVEGGVGDDGDPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...GTCCCCGTCATCGCCAACTCCACCCTCTACATCAGGGATATCTGCATTACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CAA 90 bp TGTAAATTCCCAAAGGCATTTAGAGATAAGAACCGGCAGTCAAGTGAGCAGGGGTGGGCCACGGCGCATTaGTGTTGTTCAGCTAAGCAT +
Preference number: 3 (lower is better)
Translates to: CKFPKAFRDKNRQSSEQGWATAH*CCSAKH
Trigger: ATGCTTAGCTGAACAACACAAATGCGCCGTGGCCCA...CCCCTGCTCACTTGACTGCCGGTTCTTATCTCTAAATGCCTTTGGGAATTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR-3UTR CAA 90 bp GCTGAATTATTGGAGTTGCTGTACTTCGCTGAATGCTCTTCACTATTTTCAAGAGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 3 (lower is better)
Translates to: AELLELLYFAECSSLFSRGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR TCA 72 bp GTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTT +
Preference number: 3 (lower is better)
Translates to: VNRKLQPIFGAL*SQVLAFLKVPF
Trigger: AAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR TCA 72 bp TGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCTaGGAAGCTCTGCATGAAGCTTTTCAGCAAAGACAG +
Preference number: 3 (lower is better)
Translates to: CSAKHVPRQAPI*EALHEAFQQRQ
Trigger: CTGTCTTTGCTGAAAAGCTTCATGCAGAGCTTCTCAGATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR TCA 72 bp AATATGGGATCAACTCATATACCAACTCCCTGCCAATaGTTCTCCCTTCACACAGCTTGTAGGAACCCTTCC +
Preference number: 3 (lower is better)
Translates to: NMGSTHIPTPCQ*FSLHTACRNPS
Trigger: GGAAGGGTTCCTACAAGCTGTGTGAAGGGAGAATCATTGGCAGGGAGTTGGTATATGAGTTGATCCCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR GCA 72 bp GTGAGCTGGCCCCAGATCCTGCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCTCTTCACTATTTTCAA +
Preference number: 3 (lower is better)
Translates to: VSWPQILLNYWS*CTSLNALHYFQ
Trigger: TTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGCAGGATCTGGGGCCAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CAA 90 bp TCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATCCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 3 (lower is better)
Translates to: SEHCDHRFWLSSKFLFGNPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...ATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
3UTR-3UTR CAA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAACAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 3 (lower is better)
Translates to: LRSTVITGFGFPQSSFLEQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR-3UTR CAA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGACGTTCCCCATTCTATTaGAGGAGAAAACAAAGAACT +
Preference number: 3 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRRSPFY*RRKQRT
Trigger: AGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAACG...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR CAA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTCGTTCCCCATTCTATTaGAGGAGAAAACAAAGAACT +
Preference number: 3 (lower is better)
Translates to: LTKKNYGSRVVALAALSSRSPFY*RRKQRT
Trigger: AGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAACG...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR-3UTR CAA 90 bp GAATGCTCTTCACTATTTTCAAGAGCAGATCGTTTTGACTTCTTTCGAGCTAAATCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: ECSSLFSRADRFDFFRAKSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...TTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTGAAAATAGTGAAGAGCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR TCA 72 bp CGTCCATATGTTTTTATTTGCTGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAGTACTTCTTTAGAAAT +
Preference number: 3 (lower is better)
Translates to: RPYVFICWSSRP*IFLGLQYFFRN
Trigger: ATTTCTAAAGAAGTACTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCAGCAAATAAAAACATATGGACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
3UTR GCA 72 bp TTCCTCTTCATCAGAGTAACTAGGAATCAACATTTTTaGAGCAACGGGACTTTGAGAGTTATGGTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: FLFIRVTRNQHF*SNGTLRVMVSK
Trigger: TTTGGAAACCATAACTCTCAAAGTCCCGTTGCTGCAAAAATGTTGATTCCTAGTTACTCTGATGAAGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484288.5
3UTR TCA 72 bp ACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGTaGACGTTCCCCATTCTATTTGAGGAGAAAACAAAG +
Preference number: 3 (lower is better)
Translates to: TMVFLLELKRML*TFPILFEEKTK
Trigger: CTTTGTTTTCTCCTCAAATAGAATGGGGAACGTTCACAACATTCTCTTAAGTTCTAACAGGAATACCATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR TCA 72 bp AAAAGTTACCTTATCTCACGCAAACTTACTACTGTATaGGACAGCACCCATTTAAACACAGATAAATTAGAG +
Preference number: 3 (lower is better)
Translates to: KSYLISRKLTTV*DSTHLNTDKLE
Trigger: CTCTAATTTATCTGTGTTTAAATGGGTGCTGTCTCATACAGTAGTAAGTTTGCGTGAGATAAGGTAACTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp AGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RAGQVPRCSQEARELLVVGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...CACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp GGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATACGGGGACGTGAGAGGTaGGCTGGCCCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: GRGRREGVHRHRVWRSSIRGRER*AGPRSC
Trigger: GCAGGATCTGGGGCCAGCTCACCTCTCACGTCCCCG...TATGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp AGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: RAGQVPRCSQEARELLVVARLDG*CQRHRV
Trigger: GACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGC...CACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp ACGAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: TRAGQVPRCSQEARELLVSGSPR*LLSAAP
Trigger: CGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGA...CACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCCTGGCGGCTTCTCCATaGAGGCCATCCCGGGACGCC +
Preference number: 4 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGLAASP*RPSRDA
Trigger: GGCGTCCCGGGATGGCCTTCATGGAGAAGCCGCCAG...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
CDS-3UTR GCA 90 bp CAGCGTAGACTCCAACACGGCCACCACAGCCATGGACGGGGCAGGAGGGAAGGAGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QRRLQHGHHSHGRGRREGGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...TCCTTCCCTCCTGCCCCGTCCATGGCTGTGGTGGCCGTGTTGGAGTCTACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCCGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GGAGGCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GGKGAAGGGGGGGGGGNAGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...TGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp AGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: RAGQVPRCSQEARELLVVRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...CACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp AGCCATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: SHGRGRREGVHRHRVWRSRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...CGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCATGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp AGCCATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGAATCTCGTGTGGGACTaGAGGCTCTGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SHGRGRREGVHRHRVWRSNLVWD*RLWLAS
Trigger: CGAGGCGAGCCAGAGCCTGCAGTCCCACACGAGATT...CGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCATGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS-3UTR CCA 90 bp CAGCGTAGACTCCAACACGGCCACCACAGCCATGGACGGGGCAGGAGGGAAGGATCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: QRRLQHGHHSHGRGRREGSGSPR*LLSAAP
Trigger: CGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGA...TCCTTCCCTCCTGCCCCGTCCATGGCTGTGGTGGCCGTGTTGGAGTCTACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATAAGTCATGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRREGVHRHRVWRSSISHGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp GCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCAGCACCTTGCCGGCTaGCGGCTTCTCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: ARPLGSCHSQPETRAGQVQHLAG*RLLHEG
Trigger: GCCTTCATGGAGAAGCCGCCAGCCGGCAAGGTGCTG...CACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp CAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGPSAHAIHSLRRELGRCWDCRL*LASMAA
Trigger: AGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCA...GCACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp GGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATAAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRGRREGVHRHRVWRSSINSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...TATGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp CAGCAGCCGGCAAGTGTCCCCATCGAGCATCACATTGGAGGCGTGAAGATGCCCGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: QQPASVPIEHHIGGVKMPARLDG*CQRHRV
Trigger: GACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGC...GGGCATCTTCACGCCTCCAATGTGATGCTCGATGGGGACACTTGCCGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp AGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGCACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RAGQVPRCSQEARELLVVHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...CACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp CAGCAAGCTGGAGCCCGGGGGTGGCTAGTGGCCCTGAAACCGGTCCATTCCCTGGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: QQAGARGWLVALKPVHSLDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...CAGGGAATGGACCGGTTTCAGGGCCACTAGCCACCCCCGGGCTCCAGCTTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp CAGCAAGCTGGAGCCCGGGGGTGGCTAGTGGCCCTGAAACCGGTCCATTCCCTGCCAACTCCCTGCCAATaGTTCTCCCTTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: QQAGARGWLVALKPVHSLPTPCQ*FSLHTA
Trigger: AGCTGTGTGAAGGGAGAATCATTGGCAGGGAGTTGG...CAGGGAATGGACCGGTTTCAGGGCCACTAGCCACCCCCGGGCTCCAGCTTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp TCCCTTCACACAGCTTGTAGGAACCCTTCCAGGCACAGCCAGCAAGCTCTGAGTCTGAGGAGAGAGGCCTaGCAGGACGGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLHTACRNPSRHSQQALSLRREA*QDGTPG
Trigger: CCCAGGGGTCCCGTCCTGCCAGGCCTCTCTCCTCAG...ACTCAGAGCTTGCTGGCTGTGCCTGGAAGGGTTCCTACAAGCTGTGTGAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR CAA 72 bp GGCCTGGCAGGACGGGACCCCTGGGCCACGGCGCATTaGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: GLAGRDPWATAH*CCSAKHVPRQA
Trigger: AGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCGCCGTGGCCCAGGGGTCCCGTCCTGCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR CCA 90 bp AGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGATAATATATTCCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RAGQVPRCSQEARELLVVIIYSV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGGAATATATTAT...CACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000477308.5
CDS-3UTR CCA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTATAATATATTCCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGIIYSV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGGAATATATTAT...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000477308.5
CDS-3UTR CCA 90 bp GGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATACATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: GRGRREGVHRHRVWRSSIHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...TATGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp CGGCCACCACAGCCATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RPPQPWTGQEGRSPQAPSPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...ACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCATGGCTGTGGTGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp GCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGTTTCTAGGAGCTGTCTaGTGGGGTAGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: ARPLGSCHSQPETRAGQVFLGAV*WGRRDC
Trigger: GCAATCCCTTCTACCCCATCAGACAGCTCCTAGAAA...CACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR TCA 90 bp TTTCAGCAAAGACAGCAAGCTGGAGCCCGGGGGTGGCTAGTGGCCCTGAAACCGCACAGACAGGGGCTGTaGACCCTTAAACAGACGCCT +
Preference number: 4 (lower is better)
Translates to: FQQRQQAGARGWLVALKPHRQGL*TLKQTP
Trigger: AGGCGTCTGTTTAAGGGTTCACAGCCCCTGTCTGTG...CGGTTTCAGGGCCACTAGCCACCCCCGGGCTCCAGCTTGCTGTCTTTGCTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp AGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATAAGTCATTTCATACAGTACGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RSPQAPSLAVVHKSFHTVRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...TACTGTATGAAATGACTTATGGACGACCGCCAGACTCGGTGCCTGTGGACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCCATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp GGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATAAGTCATAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GRREGVHRHRVWRSSISHRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp AGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGTGTTTGTGGCTGTACTaGCTCAGCAATTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: RAGQVPRCSQEARELLVVCLWLY*LSNYFP
Trigger: GGGAAAGTAATTGCTGAGCCAGTACAGCCACAAACA...CACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR CCA 90 bp GCCACGGCGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCGCTGGAGCCCGGGGGTaGCTAGTGGCCCTGAAACCG +
Preference number: 4 (lower is better)
Translates to: ATAHLCCSAKHVPRQAPIAGARG*LVALKP
Trigger: CGGTTTCAGGGCCACTAGCCACCCCCGGGCTCCAGC...GATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCGCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp GGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATAAGTCATTGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GRREGVHRHRVWRSSISHWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp GGCCCAATAAGGAATTCTCAAGGTCCAGCAGCCGGCAAGTGTCCCCATCGAGCAATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GPIRNSQGPAAGKCPHRAMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...TGCTCGATGGGGACACTTGCCGGCTGCTGGACCTTGAGAATTCCTTATTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TCCAAGTGTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SKCKQEASADLRSTVITGAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...ACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTACACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGCGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAACGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EASADLRSTVITGFGFPQRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...TTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTAATATTTCAATATGCTaGTGTCCCAAAAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGNISIC*CPKSLA
Trigger: GGCCAGGCTTTTGGGACAGCAGCATATTGAAATATT...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR CCA 90 bp GGTAGGCATGCCATTTTTACAGGCTTCACAAGACAGCGTAGACTCCAACACGGCTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: GRHAIFTGFTRQRRLQHGSGSPR*LLSAAP
Trigger: CGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGA...GCCGTGTTGGAGTCTACGCTGTCTTGTGAAGCCTGTAAAAATGGCATGCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp ACACGGCCACCACAGCCATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: TRPPQPWTGQEGRSPQAPSRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...CGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCATGGCTGTGGTGGCCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS-3UTR TCA 90 bp CAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: QGPSAHAIHSLRRELGRCGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...GCACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp TCCCTTCACACAGCTTGTAGGAACCCTTCCAGGCACAGCCAGCAAGCTCTGAGTGAACCGGCAGTCAAGTaGGCAGGGGCAGATCTAACC +
Preference number: 4 (lower is better)
Translates to: SLHTACRNPSRHSQQALSEPAVK*AGADLT
Trigger: GGTTAGATCTGCCCCTGCTCACTTGACTGCCGGTTC...ACTCAGAGCTTGCTGGCTGTGCCTGGAAGGGTTCCTACAAGCTGTGTGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp AGCCATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: SHGRGRREGVHRHRVWRSWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...CGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp GAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGGCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: ELGRCLGARRRQGSCWWWLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...CCACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGLNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR CCA 90 bp CAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QGPSAHAIHSLRRELGRCKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...GCACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp CAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCTGTTTGTGGCTGTACTaGCTCAGCAATTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: QGPSAHAIHSLRRELGRCCLWLY*LSNYFP
Trigger: GGGAAAGTAATTGCTGAGCCAGTACAGCCACAAACA...GCACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR CCA 90 bp GCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGTGTTTGTGGCTGTACTaGCTCAGCAATTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: ARPLGSCHSQPETRAGQVCLWLY*LSNYFP
Trigger: GGGAAAGTAATTGCTGAGCCAGTACAGCCACAAACA...CACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR CCA 90 bp GGACCAGGTACTTTGCTACCCAAAACAGGCCCTAGAACATTCAGCAGTAAGGCAGCAGGACGGGACCCCTaGGCCACGGCGCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: GPGTLLPKTGPRTFSSKAAGRDP*ATAHLC
Trigger: ACACAAATGCGCCGTGGCCCAGGGGTCCCGTCCTGC...TGCCTTACTGCTGAATGTTCTAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp AGCTTTTCAGCAAAGACAGCAAGCTGGAGCCCGGGGGTGGCTAGTGGCCCTGAAACAAAACTGACCCTATaGACGGGCTCCCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFSAKTASWSPGVASGPETKLTL*TGSLRR
Trigger: TCTCCTCAGGGAGCCCGTCCATAGGGTCAGTTTTGT...TTCAGGGCCACTAGCCACCCCCGGGCTCCAGCTTGCTGTCTTTGCTGAAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp GGCCCAATAAGGAATTCTCAAGGTCCAGCAGCCGGCAAGTGTCCCCATCGAGCATGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GPIRNSQGPAAGKCPHRAWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...TGCTCGATGGGGACACTTGCCGGCTGCTGGACCTTGAGAATTCCTTATTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp TGTAAATTCCCAAAGGCATTTAGAGATAAGAACCGGCAGTCAAGTGAGCAGGGGCGGGGACGTGAGAGGTaGGCTGGCCCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: CKFPKAFRDKNRQSSEQGRGRER*AGPRSC
Trigger: GCAGGATCTGGGGCCAGCTCACCTCTCACGTCCCCG...CCCCTGCTCACTTGACTGCCGGTTCTTATCTCTAAATGCCTTTGGGAATTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp GTGACTCTTTCACTCCTCCACCTAGGCATCTTACCAGTTGTGCTCTGTGACAAATATGGACGGGCTCCCTaGGGAGAGAGGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTLSLLHLGILPVVLCDKYGRAP*GERPGR
Trigger: CCTGCCAGGCCTCTCTCCTCAGGGAGCCCGTCCATA...TTTGTCACAGAGCACAACTGGTAAGATGCCTAGGTGGAGGAGTGAAAGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp ACGAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: TRAGQVPRCSQEARELLVAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...CACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR CCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGWDCRL*LASMAA
Trigger: AGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCA...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp GGAGGCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCATCTGCCTTTCAGCTATaGATTCACGATCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: GGKGAAGGGGGGGGGGNASAFQL*IHDPCY
Trigger: GTAACATGGATCGTGAATTCATAGCTGAAAGGCAGA...TGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000477308.5
CDS-3UTR TCA 90 bp GCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: ARPLGSCHSQPETRAGQVSRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...CACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
CDS-3UTR TCA 90 bp CGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTCGGGGACGTGAGAGGTaGGCTGGCCCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: RSSEHCDHRFWLSSKFLFRGRER*AGPRSC
Trigger: GCAGGATCTGGGGCCAGCTCACCTCTCACGTCCCCG...AAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSEHCDHRFWLSSKFLFGAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...TCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SAFPLVHHFSNRDTLGPIAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...AATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR GCA 90 bp GAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAATATTCCGTGTGGGACTaGAGGCTCTGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: EASADLRSTVITGFGFPQYSVWD*RLWLAS
Trigger: CGAGGCGAGCCAGAGCCTGCAGTCCCACACGGAATA...TTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000477308.5
CDS-3UTR GCA 90 bp CAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCTTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: QGPSAHAIHSLRRELGRCFLSKS*LHEHLQ
Trigger: TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA...GCACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR CCA 90 bp GAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGGCCTGCAATCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EASADLRSTVITGFGFPQRPAIV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGATTGCAGGCCT...TTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463280.5
CDS-3UTR TCA 90 bp CAGCAGCCGGCAAGTGTCCCCATCGAGCATCACATTGGAGGCGTGAAGATGCCCGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: QQPASVPIEHHIGGVKMPVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...GGGCATCTTCACGCCTCCAATGTGATGCTCGATGGGGACACTTGCCGGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCCGGGGACGTGAGAGGTaGGCTGGCCCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGRGRER*AGPRSC
Trigger: GCAGGATCTGGGGCCAGCTCACCTCTCACGTCCCCG...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
CDS-3UTR TCA 90 bp ACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGACGGGGACGTGAGAGGTaGGCTGGCCCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: TCSSLQQSRHFGSYFTHRRGRER*AGPRSC
Trigger: GCAGGATCTGGGGCCAGCTCACCTCTCACGTCCCCG...TCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LVHHFSNRDTLGPISHTEAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp GGAGGCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAGTTCCCCATTCTATTTaGGGAGAAAACAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: GGKGAAGGGGGGGGGGNAVPHSI*GENKEL
Trigger: GAGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAAC...TGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR TCA 90 bp TCTAACCACACAGACAGGGGCTGTGAACCCTTAAACAGACGCCTCAAGTGCCTTCCGGTCCATTCCCTGTaGAAGCCGAGCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: SNHTDRGCEPLNRRLKCLPVHSL*KPSLEI
Trigger: GATTTCCAAGCTCGGCTTTCACAGGGAATGGACCGG...AAGGCACTTGAGGCGTCTGTTTAAGGGTTCACAGCCCCTGTCTGTGTGGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp TTTCAGCAAAGACAGCAAGCTGGAGCCCGGGGGTGGCTAGTGGCCCTGAAACCGGCCTATTTTCTGTCTTaGTCAACATTTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: FQQRQQAGARGWLVALKPAYFLS*STFGGF
Trigger: AAAGCCCCCAAATGTTGATCAAGACAGAAAATAGGC...CGGTTTCAGGGCCACTAGCCACCCCCGGGCTCCAGCTTGCTGTCTTTGCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCCGTCCAGCAGCACCTTaGCGGCTGGCGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSRPAAP*RLAASP
Trigger: TGGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACG...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp GCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: ARPLGSCHSQPETRAGQVLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...CACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLAGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYSGSPR*LLSAAP
Trigger: CGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGA...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFSGSPR*LLSAAP
Trigger: CGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGA...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGAAGATCCTCTAATTaGCAAGAGCTTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGRRSSN*QELFLM
Trigger: CATCAGAAAAAGCTCTTGCCAATTAGAGGATCTTCT...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR CCA 90 bp CAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCAGAAGATCCTCTAATTaGCAAGAGCTTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: QGPSAHAIHSLRRELGRCRRSSN*QELFLM
Trigger: CATCAGAAAAAGCTCTTGCCAATTAGAGGATCTTCT...GCACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR CCA 90 bp GTGACTCTTTCACTCCTCCACCTAGGCATCTTACCAGTTGTGCTCTGTGACAAAGCAAAGACAGCAAGCTaGAGCCCGGGGGTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: VTLSLLHLGILPVVLCDKAKTAS*SPGVAS
Trigger: ACTAGCCACCCCCGGGCTCCAGCTTGCTGTCTTTGC...TTTGTCACAGAGCACAACTGGTAAGATGCCTAGGTGGAGGAGTGAAAGAGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp TTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACTGGCGGCTTCTCCATaGAGGCCATCCCGGGACGCC +
Preference number: 4 (lower is better)
Translates to: LFITSAIETLWVLFHTQKLAASP*RPSRDA
Trigger: GGCGTCCCGGGATGGCCTTCATGGAGAAGCCGCCAG...TTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp ATCCCTGATGTAGAGGGTGGAGTTGGCGATGACGGGGACGTGAGAGGTGAGCTGGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: IPDVEGGVGDDGDVRGELVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...CAGCTCACCTCTCACGTCCCCGTCATCGCCAACTCCACCCTCTACATCAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp AAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KQEASADLRSTVITGFGFMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...AAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp ATAGTCTCAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTCGGGGACGTGAGAGGTaGGCTGGCCCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: IVSNLLSHLFITSAIETLRGRER*AGPRSC
Trigger: GCAGGATCTGGGGCCAGCTCACCTCTCACGTCCCCG...AAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTCGGGGACGTGAGAGGTaGGCTGGCCCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: FSRKAAYMSICKIVLFVARGRER*AGPRSC
Trigger: GCAGGATCTGGGGCCAGCTCACCTCTCACGTCCCCG...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
CDS-3UTR TCA 90 bp CTGGAACAACTGGTTCATTTAAGAAGCAAAAGGAGATACTGGTGTCCCAATTGTGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEQLVHLRSKRRYWCPNCAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...ACAATTGGGACACCAGTATCTCCTTTTGCTTCTTAAATGAACCAGTTGTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp GAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTCTGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EHCDHRFWLSSKFLFGNSAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...AGAATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGCGTCCAGCAGCACCTTaGCGGCTGGCGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLRPAAP*RLAASP
Trigger: TGGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACG...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGARLDG*CQRHRV
Trigger: GACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGC...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGAGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: SSLQQSRHFGSYFTHRNRARLDG*CQRHRV
Trigger: GACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGC...TCTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR GCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLARLDG*CQRHRV
Trigger: GACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGC...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp GTACCTCTAATATTTGCCGTCCATATGTTTTTATTTGCTGGAGTTCCAGGCCCTGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: VPLIFAVHMFLFAGVPGPARLDG*CQRHRV
Trigger: GACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGC...AGGGCCTGGAACTCCAGCAAATAAAAACATATGGACGGCAAATATTAGAGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AGGAGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAAGGGCAGGTGCCTCGGTaGTCGCAGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSKILREQCQPNFILLKEGQVPR*SQEARE
Trigger: CTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCC...TTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTCGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GGAGGCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAGAAAATATTTCAATATaGTGCTGTCCCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GGKGAAGGGGGGGGGGNAENISI*CCPKSL
Trigger: CAGGCTTTTGGGACAGCAGCATATTGAAATATTTTC...TGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR CCA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATCAGCACCTTGCCGGCTaGCGGCTTCTCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYQHLAG*RLLHEG
Trigger: GCCTTCATGGAGAAGCCGCCAGCCGGCAAGGTGCTG...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp TCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGATCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: SSLQQSRHFGSYFTHRNRSGSPR*LLSAAP
Trigger: CGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGA...TCTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACATGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTWDCRL*LASMAA
Trigger: AGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCA...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALSSITTMVFLLELKRMLAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp ATAGTCTCAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTCGTCCAGCAGCACCTTaGCGGCTGGCGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IVSNLLSHLFITSAIETLRPAAP*RLAASP
Trigger: TGGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACG...AAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR GCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRARLDG*CQRHRV
Trigger: GACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGC...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTC +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVARLDG*CQRHRV
Trigger: GACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGC...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATATTCCGTGTGGGACTaGAGGCTCTGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: NLLSHLFITSAIETLWVLYSVWD*RLWLAS
Trigger: CGAGGCGAGCCAGAGCCTGCAGTCCCACACGGAATA...TAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484288.5
CDS-3UTR GCA 90 bp GGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATAAGTCATCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: GRREGVHRHRVWRSSISHLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp TTCTCAAGGTCCAGCAGCCGGCAAGTGTCCCCATCGAGCATCACATTGGAGGCGCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: FSRSSSRQVSPSSITLEALNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...CGCCTCCAATGTGATGCTCGATGGGGACACTTGCCGGCTGCTGGACCTTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp TCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: SSEHCDHRFWLSSKFLFGRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...TCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GCTAGTGGCCCTGAAACCGGTCCATTCCCTGTGAAAGCCGAGCTTGGAAATCTAATGGACCAGGTACTTTaGTACCCAAAACAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: ASGPETGPFPVKAELGNLMDQVL*YPKQAL
Trigger: TAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCCAT...TAGATTTCCAAGCTCGGCTTTCACAGGGAATGGACCGGTTTCAGGGCCACTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACACAGCACCTTGCCGGCTaGCGGCTTCTCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: KNYGSRVVALAALSSITTQHLAG*RLLHEG
Trigger: GCCTTCATGGAGAAGCCGCCAGCCGGCAAGGTGCTG...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp ACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGATGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TCSSLQQSRHFGSYFTHRWDCRL*LASMAA
Trigger: AGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCA...TCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGCTGGCGGCTTCTCCATaGAGGCCATCCCGGGACGCC +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVLAASP*RPSRDA
Trigger: GGCGTCCCGGGATGGCCTTCATGGAGAAGCCGCCAG...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp GCAACACAAAGGCCATTTACTGCTGTGATTGAATATTGTCATTGTTTTTCTGTCCTGGCGGCTTCTCCATaGAGGCCATCCCGGGACGCC +
Preference number: 4 (lower is better)
Translates to: ATQRPFTAVIEYCHCFSVLAASP*RPSRDA
Trigger: GGCGTCCCGGGATGGCCTTCATGGAGAAGCCGCCAG...GACAGAAAAACAATGACAATATTCAATCACAGCAGTAAATGGCCTTTGTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCAATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: LRSTVITGFGFPQSSFLENSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGGGCCCCAGATCCTGCTaGATTATTGGAGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGGPRSC*IIGVAV
Trigger: TACAGCAACTCCAATAATTCAGCAGGATCTGGGGCC...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
CDS-3UTR TCA 90 bp TCCAAGTGTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTGGCCCCAGATCCTGCTaGATTATTGGAGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SKCKQEASADLRSTVITGGPRSC*IIGVAV
Trigger: TACAGCAACTCCAATAATTCAGCAGGATCTGGGGCC...ACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTACACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp GCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAGATACTTAAGAGAATGTTGTaGACGTTCCCCATTCTATTT +
Preference number: 4 (lower is better)
Translates to: ARELLVVVEVEEVEVMQILKRML*TFPILF
Trigger: AAATAGAATGGGGAACGTTCACAACATTCTCTTAAG...TATCTGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR GCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTACGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SKILREQCQPNFILLKELRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGCGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLARPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp ACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAACAATCGTGTGGGACTaGAGGCTCTGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: TCSSLQQSRHFGSYFTHRTIVWD*RLWLAS
Trigger: CGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTGT...TCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383715.8
CDS-3UTR CCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGACAGCACCTTGCCGGCTaGCGGCTTCTCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRQHLAG*RLLHEG
Trigger: GCCTTCATGGAGAAGCCGCCAGCCGGCAAGGTGCTG...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTATGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVWDCRL*LASMAA
Trigger: AGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCA...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp GTTCCCTTTTCGTTAAACATCCTAATTAGCAACGCTGAGGATTCATTAGCTGTGTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VPFSLNILISNAEDSLAVWDCRL*LASMAA
Trigger: AGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCA...CACAGCTAATGAATCCTCAGCGTTGCTAATTAGGATGTTTAACGAAAAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS-3UTR CCA 90 bp CGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCTGAGAAGCACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RICVVQLSMYQDRLQSEKHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...CTTCTCAGATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp CTGGAACAACTGGTTCATTTAAGAAGCAAAAGGAGATACTGGTGTCCCAATTGTGCCCGCTCCTCCTGTTaGCGGACAGGAAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LEQLVHLRSKRRYWCPNCARSSC*RTGRWH
Trigger: ATGCCACCTTCCTGTCCGCCAACAGGAGGAGCGGGC...ACAATTGGGACACCAGTATCTCCTTTTGCTTCTTAAATGAACCAGTTGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTCTGGCGGCTTCTCCATaGAGGCCATCCCGGGACGCC +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCLAASP*RPSRDA
Trigger: GGCGTCCCGGGATGGCCTTCATGGAGAAGCCGCCAG...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KNYGSRVVALAALSSITTMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLANSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAACGGGGACGTGAGAGGTaGGCTGGCCCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQRGRER*AGPRSC
Trigger: GCAGGATCTGGGGCCAGCTCACCTCTCACGTCCCCG...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
CDS-3UTR TCA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTGCGATGACGGGGACGTaGGAGGTGAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVAMTGT*EVSWPQ
Trigger: CTGGGGCCAGCTCACCTCTCACGTCCCCGTCATCGC...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TCTGAGTGGCAGAAGCAGCTCCTCGCACATCTGGAACAACTGGTTCATTTAAGAACTCCATCACTAACCTaGTGTAGAGGGTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SEWQKQLLAHLEQLVHLRTPSLT*CRGWSW
Trigger: CCAACTCCACCCTCTACATCAGGTTAGTGATGGAGT...TCTTAAATGAACCAGTTGTTCCAGATGTGCGAGGAGCTGCTTCTGCCACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTACGTCCAGCAGCACCTTaGCGGCTGGCGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SKILREQCQPNFILLKELRPAAP*RLAASP
Trigger: TGGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACG...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp GAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTCTTATTCCGTGTGGGACTaGAGGCTCTGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: EHCDHRFWLSSKFLFGNSYSVWD*RLWLAS
Trigger: CGAGGCGAGCCAGAGCCTGCAGTCCCACACGGAATA...AGAATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000477308.5
CDS-3UTR GCA 90 bp GGCCCAATAAGGAATTCTCAAGGTCCAGCAGCCGGCAAGTGTCCCCATCGAGCACTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: GPIRNSQGPAAGKCPHRALYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...TGCTCGATGGGGACACTTGCCGGCTGCTGGACCTTGAGAATTCCTTATTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTCGAGAGCTGGGCAGGTaGCTCGGTGCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVRELGR*LGARRR
Trigger: CCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCG...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: FSRKAAYMSICKIVLFVARPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTCTAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: EHCDHRFWLSSKFLFGNSRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...AGAATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TCTAACCACACAGACAGGGGCTGTGAACCCTTAAACAGACGCCTCAAGTGCCTTACGCCTCAAGTGCCTTaGTTGTTAAAGGAGGATTTC +
Preference number: 4 (lower is better)
Translates to: SNHTDRGCEPLNRRLKCLTPQVP*LLKEDF
Trigger: GAAATCCTCCTTTAACAAGCAAGGCACTTGAGGCGT...AAGGCACTTGAGGCGTCTGTTTAAGGGTTCACAGCCCCTGTCTGTGTGGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp AAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: KQEASADLRSTVITGFGFHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...AAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp GCCACGGCGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ATAHLCCSAKHVPRQAPIKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...GATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCGCCGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp AATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTACACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 4 (lower is better)
Translates to: NLLSHLFITSAIETLWVLHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...TAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp CGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTCACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RSSEHCDHRFWLSSKFLFHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...AAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp TCCAAGTGTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTCCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SKCKQEASADLRSTVITGPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...ACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTACACTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR CCA 90 bp CGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RSSEHCDHRFWLSSKFLFRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...AAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACATGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAATGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LRSTVITGFGFPQSSFLEWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp TTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACTGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FPLVHHFSNRDTLGPISHWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...GTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCAGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: SSEHCDHRFWLSSKFLFGDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...TCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp TTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: FPLVHHFSNRDTLGPISHDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...GTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLSKSCLHEHLQNSTVCGNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...GCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAACGTCCAGCAGCACCTTaGCGGCTGGCGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQRPAAP*RLAASP
Trigger: TGGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACG...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGTGGGGTAGAAGGGATTaGAACACAAAGGCCATTTAC +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGWGRRD*NTKAIY
Trigger: GTAAATGGCCTTTGTGTTGCAATCCCTTCTACCCCA...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCAATCGTGTGGGACTaGAGGCTCTGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVAIVWD*RLWLAS
Trigger: CGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTGC...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463280.5
CDS-3UTR CCA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVSGSPR*LLSAAP
Trigger: CGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGA...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAATCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCG +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQSGSPR*LLSAAP
Trigger: CGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGA...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVWDCRL*LASMAA
Trigger: AGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCA...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp CAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCCATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: QICFPTCSSLQQSRHFGSHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...GGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp TCCAAGTGTAAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SKCKQEASADLRSTVITGKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...ACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTTACACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp GAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: EASADLRSTVITGFGFPQKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...TTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACTTCTAACAATCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTLLTIV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGATTGTTAGAAG...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383715.8
CDS-3UTR CCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCACTTCTAACAATCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSLLTIV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGATTGTTAGAAG...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479241.5
CDS-3UTR CCA 90 bp GGACCAGGTACTTTGCTACCCAAAACAGGCCCTAGAACATTCAGCAGTAAGGCAAAGAATATCCTCCCATaGACCAGGTACTTTGCTACC +
Preference number: 4 (lower is better)
Translates to: GPGTLLPKTGPRTFSSKAKNILP*TRYFAT
Trigger: GGTAGCAAAGTACCTGGTCCATGGGAGGATATTCTT...TGCCTTACTGCTGAATGTTCTAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp GTTCCCTTTTCGTTAAACATCCTAATTAGCAACGCTGAGGATTCATTAGCTGTGCAAGGCAATCTCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VPFSLNILISNAEDSLAVQGNLV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGAGATTGCCTTG...CACAGCTAATGAATCCTCAGCGTTGCTAATTAGGATGTTTAACGAAAAGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS-3UTR TCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACATGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: KNYGSRVVALAALSSITTWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: KQEASADLRSTVITGFGFGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...AAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp ACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: TCSSLQQSRHFGSYFTHRDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...TCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp TCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: SEHCDHRFWLSSKFLFGNDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...ATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp TTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: FITSAIETLWVLFHTQKQDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...CTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp AATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTAGGCCCCAGATCCTGCTaGATTATTGGAGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: NLLSHLFITSAIETLWVLGPRSC*IIGVAV
Trigger: TACAGCAACTCCAATAATTCAGCAGGATCTGGGGCC...TAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAGGCCCCAGATCCTGCTaGATTATTGGAGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSEHCDHRFWLSSKFLFGGPRSC*IIGVAV
Trigger: TACAGCAACTCCAATAATTCAGCAGGATCTGGGGCC...TCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp TTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACGGCCCCAGATCCTGCTaGATTATTGGAGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: FPLVHHFSNRDTLGPISHGPRSC*IIGVAV
Trigger: TACAGCAACTCCAATAATTCAGCAGGATCTGGGGCC...GTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp CGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCTGAGAAGAAATCAGAAACGCAGTaGCTCTTTCACTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: RICVVQLSMYQDRLQSEKKSETQ*LFHSST
Trigger: GGTGGAGGAGTGAAAGAGTCACTGCGTTTCTGATTT...CTTCTCAGATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp GCCACGGCGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: ATAHLCCSAKHVPRQAPILNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...GATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCGCCGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTCAGCACCTTGCCGGCTaGCGGCTTCTCCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCQHLAG*RLLHEG
Trigger: GCCTTCATGGAGAAGCCGCCAGCCGGCAAGGTGCTG...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCWDCRL*LASMAA
Trigger: AGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCA...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp AGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SRSSEHCDHRFWLSSKFLKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...AAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTCACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: FSRKAAYMSICKIVLFVARKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp TTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: FLSKSCLHEHLQNSTVCGRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...GCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp GAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: EASADLRSTVITGFGFPQSRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...TTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
CDS-3UTR TCA 90 bp TTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FLSKSCLHEHLQNSTVCGWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...GCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTATGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LTKKNYGSRVVALAALSSDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp CTCATATACCAACTCCCTGCCAATGATTCTCCCTTCACACAGCTTGTAGGAACCGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: LIYQLPANDSPFTQLVGTVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...GGTTCCTACAAGCTGTGTGAAGGGAGAATCATTGGCAGGGAGTTGGTATATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp GCAACACAAAGGCCATTTACTGCTGTGATTGAATATTGTCATTGTTTTTCTGTCATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ATQRPFTAVIEYCHCFSVMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...GACAGAAAAACAATGACAATATTCAATCACAGCAGTAAATGGCCTTTGTGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTAAATTCTGGATGGAGCTaGGCAAGGCCCCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SKILREQCQPNFILLKELNSGWS*ARPLGS
Trigger: TGAGCCGAGGGGCCTTGCTCAGCTCCATCCAGAATT...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp CGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSSEHCDHRFWLSSKFLFIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...AAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATGGCCCCAGATCCTGCTaGATTATTGGAGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SEHCDHRFWLSSKFLFGNGPRSC*IIGVAV
Trigger: TACAGCAACTCCAATAATTCAGCAGGATCTGGGGCC...ATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGTTTCTAGGAGCTGTCTaGTGGGGTAGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLFLGAV*WGRRDC
Trigger: GCAATCCCTTCTACCCCATCAGACAGCTCCTAGAAA...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGCCCAAACTTAATTGCTaGGGATTAAGAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGPKLNC*GLRRSS
Trigger: AGAGGATCTTCTTAATCCTCAGCAATTAAGTTTGGG...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAATATTCCGTGTGGGACTaGAGGCTCTGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQYSVWD*RLWLAS
Trigger: CGAGGCGAGCCAGAGCCTGCAGTCCCACACGGAATA...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
CDS-3UTR GCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGTGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGLNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAGGCCCCTCGGCTCATaGCATTCACAGCCTGAGACG +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICRPLGS*HSQPET
Trigger: CGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCT...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGTTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGFLSKS*LHEHLQ
Trigger: TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTACAATCGTGTGGGACTaGAGGCTCTGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVTIVWD*RLWLAS
Trigger: CGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTGT...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479241.5
CDS-3UTR GCA 90 bp AGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTGTTCAAAATGGTGCATaGTCTACTGATGTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SRSSEHCDHRFWLSSKFLVQNGA*STDVEG
Trigger: ACCCTCTACATCAGTAGAGCATGCACCATTTTGAAC...AAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR GCA 90 bp GGACCAGGTACTTTGCTACCCAAAACAGGCCCTAGAACATTCAGCAGTAAGGCAACAGAGTCAAATCGTTaGCAGAAAATCAGAAACGCA +
Preference number: 4 (lower is better)
Translates to: GPGTLLPKTGPRTFSSKATESNR*QKIRNA
Trigger: TGCGTTTCTGATTTTCTGGCAACGATTTGACTCTGT...TGCCTTACTGCTGAATGTTCTAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp AAAACATCGCTGAATAATGGCATCTGTAAGAGCCGGGAGATGGTAGGCATGCCAGGGTGCAGTATAGTTTaGGGAATAGTTGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: KTSLNNGICKSREMVGMPGCSIV*GIVVWI
Trigger: GATCCAAACAACTATTCCGCAAACTATACTGCACCC...TGGCATGCCTACCATCTCCCGGCTCTTACAGATGCCATTATTCAGCGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477308.5
CDS-3UTR CCA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGCACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ALSSITTMVFLLELKRMLHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCCCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp AAAGATAAGGACAAGAATATCCTCCCATGGACCAGGTACTTTGCTACCCAAAACTGTGAAAGCCGAGCTTaGAAATCTAGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KDKDKNILPWTRYFATQNCESRA*KSSPSA
Trigger: AGCTGAGGGGCTAGATTTCCAAGCTCGGCTTTCACA...GTTTTGGGTAGCAAAGTACCTGGTCCATGGGAGGATATTCTTGTCCTTATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459676.6
3UTR CAA 72 bp ATAAGGACAAGAATATCCTCCCATGGACCAGGTACTTaGCTACCCAAAACAGGCCCTAGAACATTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: IRTRISSHGPGT*LPKTGPRTFSS
Trigger: ACTGCTGAATGTTCTAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCCATGGGAGGATATTCTTGTCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGTGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALSSITTMVFLLELKRMLWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCAGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCATGCCATTCACAGCCTaGGACGAGAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICMPFTA*DESWAG
Trigger: ACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCAT...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLAIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTTTTCTAGGAGCTGTCTaGTGGGGTAGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTFLGAV*WGRRDC
Trigger: GCAATCCCTTCTACCCCATCAGACAGCTCCTAGAAA...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TTTGTGGCTGTACTGGCTCAGCAATTACTTTCCCAGGAAGAGGGTAGTTTGGGGCTTAAGAGAATGTTGTaGACGTTCCCCATTCTATTT +
Preference number: 4 (lower is better)
Translates to: FVAVLAQQLLSQEEGSLGLKRML*TFPILF
Trigger: AAATAGAATGGGGAACGTTCACAACATTCTCTTAAG...CCCCAAACTACCCTCTTCCTGGGAAAGTAATTGCTGAGCCAGTACAGCCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TGTAAATTCCCAAAGGCATTTAGAGATAAGAACCGGCAGTCAAGTGAGCAGGGGAATTTGCACTCCCACTaGTTTCTCTTGAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: CKFPKAFRDKNRQSSEQGNLHSH*FLLRKL
Trigger: CAGCTTTCTCAAGAGAAATCAGTGGGAGTGCAAATT...CCCCTGCTCACTTGACTGCCGGTTCTTATCTCTAAATGCCTTTGGGAATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp CTGGAACAACTGGTTCATTTAAGAAGCAAAAGGAGATACTGGTGTCCCAATTGTGCATTTGAGTGGAGCTaGAGAATGCTCTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LEQLVHLRSKRRYWCPNCAFEWS*RMLLAA
Trigger: AGCTGCCAAGAGCATTCTTCAGCTCCACTCAAATGC...ACAATTGGGACACCAGTATCTCCTTTTGCTTCTTAAATGAACCAGTTGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp AGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: SRSSEHCDHRFWLSSKFLWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...AAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR GCA 90 bp TTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCATCTTAAGGGAGCAATaGCAGCCTAACTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: FSRSSEHCDHRFWLSSKFILREQ*QPNFIL
Trigger: CAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGAT...GAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR GCA 90 bp CGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTTGGGGTAGAAGGGATTaGAACACAAAGGCCATTTAC +
Preference number: 4 (lower is better)
Translates to: RSSEHCDHRFWLSSKFLFWGRRD*NTKAIY
Trigger: GTAAATGGCCTTTGTGTTGCAATCCCTTCTACCCCA...AAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR GCA 90 bp CAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCGTTCAAAATGGTGCATaGTCTACTGATGTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: QICFPTCSSLQQSRHFGSVQNGA*STDVEG
Trigger: ACCCTCTACATCAGTAGAGCATGCACCATTTTGAAC...GGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR GCA 90 bp TCTGAGTGGCAGAAGCAGCTCCTCGCACATCTGGAACAACTGGTTCATTTAAGAATGACACTGCTAATTTaGACTCCCACTGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SEWQKQLLAHLEQLVHLRMTLLI*TPTDFS
Trigger: AGAGAAATCAGTGGGAGTGCAAATTAGCAGTGTCAT...TCTTAAATGAACCAGTTGTTCCAGATGTGCGAGGAGCTGCTTCTGCCACTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACAGTTCAAAATGGTGCATaGTCTGATGTAGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTVQNGA*SDVEGG
Trigger: TCCACCCTCTACATCAGAGCATGCACCATTTTGAAC...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495557.5
CDS-3UTR CCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGACATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACAAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTAAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SKILREQCQPNFILLKELRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATGCAATCGAGACACTTTaGGTCCTATTTCACACACAG +
Preference number: 4 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYAIETL*VLFHTQ
Trigger: CTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGC...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CCA 90 bp TCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTGCAATCGAGACACTTTaGGTCCTATTTCACACACAG +
Preference number: 4 (lower is better)
Translates to: SAFPLVHHFSNRDTLGPIAIETL*VLFHTQ
Trigger: CTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGC...AATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCATCTGCCTTTCAGCTATaGATTCACGATCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSSAFQL*IHDPCY
Trigger: GTAACATGGATCGTGAATTCATAGCTGAAAGGCAGA...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp GCAACACAAAGGCCATTTACTGCTGTGATTGAATATTGTCATTGTTTTTCTGTCTGGAGTTCCAGGCCCTaGATCTTCTTAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ATQRPFTAVIEYCHCFSVWSSRP*IFLGLQ
Trigger: CTGCAACCCTAAGAAGATTCAGGGCCTGGAACTCCA...GACAGAAAAACAATGACAATATTCAATCACAGCAGTAAATGGCCTTTGTGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTAGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: NLLSHLFITSAIETLWVLVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...TAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp CGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: RSSEHCDHRFWLSSKFLFVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...AAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR TCA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: FSRKAAYMSICKIVLFVAIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp GCTGAATTATTGGAGTTGCTGTACTTCGCTGAATGCTCTTCACTATTTTCAAGAGGCCCCAGATCCTGCTaGATTATTGGAGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AELLELLYFAECSSLFSRGPRSC*IIGVAV
Trigger: TACAGCAACTCCAATAATTCAGCAGGATCTGGGGCC...TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR TCA 90 bp CTCATATACCAACTCCCTGCCAATGATTCTCCCTTCACACAGCTTGTAGGAACCAAACTTACTACTGTATaGGACAGCACCCATTTAAAC +
Preference number: 4 (lower is better)
Translates to: LIYQLPANDSPFTQLVGTKLTTV*DSTHLN
Trigger: GTTTAAATGGGTGCTGTCTCATACAGTAGTAAGTTT...GGTTCCTACAAGCTGTGTGAAGGGAGAATCATTGGCAGGGAGTTGGTATATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAGCAGCAACGGGACTTTaGGAGTTATGGTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LVHHFSNRDTLGPISHTEAATGL*ELWFPK
Trigger: TTTTGGAAACCATAACTCTCAAAGTCCCGTTGCTGC...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484288.5
CDS-3UTR GCA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCAATATTTCAATATGCTaGTGTCCCAAAAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSNISIC*CPKSLA
Trigger: GGCCAGGCTTTTGGGACAGCAGCATATTGAAATATT...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCGAAAATATTTCAATATaGTGCTGTCCCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FSRSSEHCDHRFWLSSKFENISI*CCPKSL
Trigger: CAGGCTTTTGGGACAGCAGCATATTGAAATATTTTC...GAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR GCA 90 bp AAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCACAATGACATTCTCTaGATAGTAACCAACACTGAT +
Preference number: 4 (lower is better)
Translates to: KQEASADLRSTVITGFGFHNDIL*IVTNTD
Trigger: ATCAGTGTTGGTTACTATGCAGAGAATGTCATTGTG...AAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR GCA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATGTTCAAAATGGTGCATaGTCTACTGATGTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYVQNGA*STDVEG
Trigger: ACCCTCTACATCAGTAGAGCATGCACCATTTTGAAC...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CCA 90 bp TTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCATAATATATTCCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FLSKSCLHEHLQNSTVCGIIYSV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGGAATATATTAT...GCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
CDS-3UTR CCA 90 bp TTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAAATAATATATTCCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LFITSAIETLWVLFHTQKIIYSV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGGAATATATTAT...TTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484288.5
CDS-3UTR CCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTCACAGGCACCGAGTCTaGCGGTCGTCCATAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCHRHRV*RSSISH
Trigger: ATGACTTATGGACGACCGCCAGACTCGGTGCCTGTG...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTAGGAAGAGGGTAGTTTaGGGGGTAGGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCRKRVV*GVGVSR
Trigger: CCTACTCACCCCTACCCCCCAAACTACCCTCTTCCT...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACATGTTTGTGGCTGTACTaGCTCAGCAATTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: KNYGSRVVALAALSSITTCLWLY*LSNYFP
Trigger: GGGAAAGTAATTGCTGAGCCAGTACAGCCACAAACA...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATGCTGTCCCAAAAGCCTaGCCATTAGAGGATAAACAA +
Preference number: 4 (lower is better)
Translates to: SEHCDHRFWLSSKFLFGNAVPKA*PLEDKQ
Trigger: TTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGC...ATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR CCA 90 bp TCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGAGCAATCGAGACACTTTaGGTCCTATTTCACACACAG +
Preference number: 4 (lower is better)
Translates to: SSLQQSRHFGSYFTHRNRAIETL*VLFHTQ
Trigger: CTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGC...TCTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CCA 90 bp TCTCTCATTCTAAAAGTTACCTTATCTCACGCAAACTTACTACTGTATGAGACAGCTGAAGAATGCTCTTaGCAGCTCCTGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLILKVTLSHANLLLYETAEECS*QLLGAV
Trigger: CACAGCACCCAGGAGCTGCCAAGAGCATTCTTCAGC...TGTCTCATACAGTAGTAAGTTTGCGTGAGATAAGGTAACTTTTAGAATGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CCA 90 bp TCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTCAGATCCTGAATTATTaGAGTTGCTGTACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: SAFPLVHHFSNRDTLGPIQILNY*SCCTSL
Trigger: CAGCGAAGTACAGCAACTCCAATAATTCAGGATCTG...AATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495557.5
CDS-3UTR TCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTTCTGCCTTTCAGCTATaGATTCACGATCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLASAFQL*IHDPCY
Trigger: GTAACATGGATCGTGAATTCATAGCTGAAAGGCAGA...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAATCTGCCTTTCAGCTATaGATTCACGATCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: LVHHFSNRDTLGPISHTESAFQL*IHDPCY
Trigger: GTAACATGGATCGTGAATTCATAGCTGAAAGGCAGA...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGATCTGCCTTTCAGCTATaGATTCACGATCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: SSLQQSRHFGSYFTHRNRSAFQL*IHDPCY
Trigger: GTAACATGGATCGTGAATTCATAGCTGAAAGGCAGA...TCTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACAAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTSRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAAGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: LFITSAIETLWVLFHTQKGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...TTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAGATCCATGGTGGGACTaGGCTCTTGTCAGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQDPWWD*ALVSLR
Trigger: TCGAAGACTGACAAGAGCTCAGTCCCACCATGGATC...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGAGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: SSLQQSRHFGSYFTHRNRVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...TCTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCAGTTCCCCATTCTATTTaGGGAGAAAACAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSVPHSI*GENKEL
Trigger: GAGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAAC...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp ATAAATTGTAAATTCCCAAAGGCATTTAGAGATAAGAACCGGCAGTCAAGTGAGCTGCTATCTAACCCCTaGAATTGTTGGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: INCKFPKAFRDKNRQSSELLSNP*NCWAKA
Trigger: TGCCTTGGCCCAACAATTTCAGGGGTTAGATAGCAG...CTCACTTGACTGCCGGTTCTTATCTCTAAATGCCTTTGGGAATTTACAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACATGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR GCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCACTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSLNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAACTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: LRSTVITGFGFPQSSFLELNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: SHLFITSAIETLWVLFHTLNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR GCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCATTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSFLSKS*LHEHLQ
Trigger: TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCAATATTTCAATATGCTaGTGTCCCAAAAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGNISIC*CPKSLA
Trigger: GGCCAGGCTTTTGGGACAGCAGCATATTGAAATATT...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGAATATTTCAATATGCTaGTGTCCCAAAAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLNISIC*CPKSLA
Trigger: GGCCAGGCTTTTGGGACAGCAGCATATTGAAATATT...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTATGGGGTAGAAGGGATTaGAACACAAAGGCCATTTAC +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVWGRRD*NTKAIY
Trigger: GTAAATGGCCTTTGTGTTGCAATCCCTTCTACCCCA...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGATGGGGTAGAAGGGATTaGAACACAAAGGCCATTTAC +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRWGRRD*NTKAIY
Trigger: GTAAATGGCCTTTGTGTTGCAATCCCTTCTACCCCA...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCGTTCAAAATGGTGCATaGTCTACTGATGTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGVQNGA*STDVEG
Trigger: ACCCTCTACATCAGTAGAGCATGCACCATTTTGAAC...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR CCA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGATAATATATTCCGTGTaGGACTGCAGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ALSSITTMVFLLELKRMLIIYSV*DCRLWL
Trigger: GAGCCAGAGCCTGCAGTCCCACACGGAATATATTAT...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356151.7
ENST00000383716.7
CDS-3UTR CCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGCATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp AGGAGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAAAAGTGGCCAAAGCAGTaGACATCCACACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: RSKILREQCQPNFILLKEKWPKQ*TSTLSN
Trigger: ATTGGAAAGTGTGGATGTCCACTGCTTTGGCCACTT...TTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTATATCCCTGAATTATTaGAGTTGCTGTACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFISLNY*SCCTSL
Trigger: CAGCGAAGTACAGCAACTCCAATAATTCAGGGATAT...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479134.5
CDS-3UTR CCA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGCCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ALSSITTMVFLLELKRMLPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp ATTGTGAAAAATAAGATCGGTAGAAGGAAGGCAGGCCCAATAAGGAATTCTCAACCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: IVKNKIGRRKAGPIRNSQPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...TTGAGAATTCCTTATTGGGCCTGCCTTCCTTCTACCGATCTTATTTTTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CCA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTTGTTTGTGGCTGTACTaGCTCAGCAATTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTCLWLY*LSNYFP
Trigger: GGGAAAGTAATTGCTGAGCCAGTACAGCCACAAACA...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp ATATTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACGCTGTCCCAAAAGCCTaGCCATTAGAGGATAAACAA +
Preference number: 4 (lower is better)
Translates to: IFQYAAVPKAWPLEDKQDAVPKA*PLEDKQ
Trigger: TTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGC...GTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTGCTGTCCCAAAAGCCTaGCCATTAGAGGATAAACAA +
Preference number: 4 (lower is better)
Translates to: LTKKNYGSRVVALAALSSAVPKA*PLEDKQ
Trigger: TTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGC...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGCAGATCCTGAATTATTaGAGTTGCTGTACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLQILNY*SCCTSL
Trigger: CAGCGAAGTACAGCAACTCCAATAATTCAGGATCTG...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479241.5
ENST00000493474.1
3UTR CAA 72 bp TCAGATAAGGAAATAGTCTCAAATCTGCTTTCCCACTaGTTCATCACTTCAGCAATCGAGACACTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SDKEIVSNLLSH*FITSAIETLWV
Trigger: GACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTATTTCCTTATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTTCTGCCTTTCAGCTATaGATTCACGATCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: LTKKNYGSRVVALAALSSSAFQL*IHDPCY
Trigger: GTAACATGGATCGTGAATTCATAGCTGAAAGGCAGA...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLASRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGAAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: SSLQQSRHFGSYFTHRNRSRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...TCTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR TCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAAGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: LFITSAIETLWVLFHTQKVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...TTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR TCA 90 bp GCTGTGTTAGTTATTAATAATGAATATGGGATCAACTCATATACCAACTCCCTGGGCCCCAGATCCTGCTaGATTATTGGAGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AVLVINNEYGINSYTNSLGPRSC*IIGVAV
Trigger: TACAGCAACTCCAATAATTCAGCAGGATCTGGGGCC...CAGGGAGTTGGTATATGAGTTGATCCCATATTCATTATTAATAACTAACACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR TCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCAGGCCATTTACTGCTGTaGTTGAATATTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSGHLLL*LNIVIV
Trigger: AACAATGACAATATTCAATCACAGCAGTAAATGGCC...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTTTCTAGGAGCTGTCTaGTGGGGTAGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVFLGAV*WGRRDC
Trigger: GCAATCCCTTCTACCCCATCAGACAGCTCCTAGAAA...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAATTTCTAGGAGCTGTCTaGTGGGGTAGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQFLGAV*WGRRDC
Trigger: GCAATCCCTTCTACCCCATCAGACAGCTCCTAGAAA...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTGTTCCCCATTCTATTTaGGGAGAAAACAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLAVPHSI*GENKEL
Trigger: GAGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAAC...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCCTTAAGAGAATGTTGTaGACGTTCCCCATTCTATTT +
Preference number: 4 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSLKRML*TFPILF
Trigger: AAATAGAATGGGGAACGTTCACAACATTCTCTTAAG...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACACCCAAACTTAATTGCTaGGGATTAAGAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: KNYGSRVVALAALSSITTPKLNC*GLRRSS
Trigger: AGAGGATCTTCTTAATCCTCAGCAATTAAGTTTGGG...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAAAAATGCCATGCAGTTaGTTTGCAGGTTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVHHFSNRDTLGPISHTEKMPCS*FAGFRA
Trigger: AGCTCTAAAACCTGCAAATCAACTGCATGGCATTTT...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484288.5
CDS-3UTR GCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGTGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAATGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: LVHHFSNRDTLGPISHTEWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR GCA 90 bp TCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SAFPLVHHFSNRDTLGPILYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...AATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR GCA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR GCA 90 bp ACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGACTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: TCSSLQQSRHFGSYFTHRLNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...TCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR GCA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAACTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: LVHHFSNRDTLGPISHTELNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR GCA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCAGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SSEHCDHRFWLSSKFLFGAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...TCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000493474.1
CDS-3UTR GCA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGFLSKS*LHEHLQ
Trigger: TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGATCTTAAGGGAGCAATaGCAGCCTAACTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLILREQ*QPNFIL
Trigger: CAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGAT...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp ATATTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACGTTCAAAATGGTGCATaGTCTACTGATGTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: IFQYAAVPKAWPLEDKQDVQNGA*STDVEG
Trigger: ACCCTCTACATCAGTAGAGCATGCACCATTTTGAAC...GTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR GCA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATGATGAAGTCACTGGGTaGTTTTTAAAGATGCTGTAT +
Preference number: 4 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYDEVTG*FLKMLY
Trigger: ATACAGCATCTTTAAAAAGCACCCAGTGACTTCATC...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484288.5
CDS-3UTR CCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTCATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAACATCGAGCATCACATTaGAGGCGTGAAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQHRASH*RREDAH
Trigger: ATGGGCATCTTCACGCCTCCAATGTGATGCTCGATG...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCAGAAGATCCTCTAATTaGCAAGAGCTTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSRRSSN*QELFLM
Trigger: CATCAGAAAAAGCTCTTGCCAATTAGAGGATCTTCT...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp ATTGTGAAAAATAAGATCGGTAGAAGGAAGGCAGGCCCAATAAGGAATTCTCAATCTGCCTTTCAGCTATaGATTCACGATCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: IVKNKIGRRKAGPIRNSQSAFQL*IHDPCY
Trigger: GTAACATGGATCGTGAATTCATAGCTGAAAGGCAGA...TTGAGAATTCCTTATTGGGCCTGCCTTCCTTCTACCGATCTTATTTTTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477308.5
CDS-3UTR TCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVSRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAAGCCGTTCCTTTGGCTaGTTTTTAATCTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRSRSFG*FLIFIK
Trigger: CTTGATGAAGATTAAAAATCAGCCAAAGGAACGGCT...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTATCTTCGGAGCACTGTaGTCACAGGTTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCIFGAL*SQVLAF
Trigger: GAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGAT...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAGGCCATTTACTGCTGTaGTTGAATATTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: KNYGSRVVALAALSSITTGHLLL*LNIVIV
Trigger: AACAATGACAATATTCAATCACAGCAGTAAATGGCC...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGTTCCCCATTCTATTTaGGGAGAAAACAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTVPHSI*GENKEL
Trigger: GAGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAAC...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp ATATTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACCCCAAACTTAATTGCTaGGGATTAAGAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: IFQYAAVPKAWPLEDKQDPKLNC*GLRRSS
Trigger: AGAGGATCTTCTTAATCCTCAGCAATTAAGTTTGGG...GTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGACCCAAACTTAATTGCTaGGGATTAAGAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRPKLNC*GLRRSS
Trigger: AGAGGATCTTCTTAATCCTCAGCAATTAAGTTTGGG...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTAATCTCAGTATAGTTTaGGGAATAGTTGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFNLSIV*GIVVWI
Trigger: GATCCAAACAACTATTCCGCAAACTATACTGAGATT...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp ATATTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: IFQYAAVPKAWPLEDKQDLNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...GTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: FSRKAAYMSICKIVLFVALNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTATTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVFLSKS*LHEHLQ
Trigger: TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTATCTTAAGGGAGCAATaGCAGCCTAACTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTILREQ*QPNFIL
Trigger: CAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGAT...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAATCTTAAGGGAGCAATaGCAGCCTAACTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVILREQ*QPNFIL
Trigger: CAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGAT...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCACAATGACATTCTCTaGATAGTAACCAACACTGAT +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLAHNDIL*IVTNTD
Trigger: ATCAGTGTTGGTTACTATGCAGAGAATGTCATTGTG...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACACACAATGACATTCTCTaGATAGTAACCAACACTGAT +
Preference number: 4 (lower is better)
Translates to: KNYGSRVVALAALSSITTHNDIL*IVTNTD
Trigger: ATCAGTGTTGGTTACTATGCAGAGAATGTCATTGTG...TGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp ATAGTCTCAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTAGGAATCAACATTTTTaGAGCAACGGGACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: IVSNLLSHLFITSAIETLRNQHF*SNGTLR
Trigger: TCTCAAAGTCCCGTTGCTGCAAAAATGTTGATTCCT...AAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484288.5
CDS-3UTR CCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAACCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCCCTTTTTGGAAATTCTaGATGGAGCTGAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICPFWKF*MELSKA
Trigger: GGCCTTGCTCAGCTCCATCCAGAATTTCCAAAAAGG...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTCCCAAAAGCCTaGCCATTAGAGGATAAACAA +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVAVPKA*PLEDKQ
Trigger: TTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGC...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTAGAAGATCCTCTAATTaGCAAGAGCTTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLARRSSN*QELFLM
Trigger: CATCAGAAAAAGCTCTTGCCAATTAGAGGATCTTCT...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGGAATCCCTTGTCATaGAGAAACTTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCGNPLS*RNFSTS
Trigger: AGAGGTACTGAAGTTTCTTCATGACAAGGGATTCCC...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTAGTTGCTGTACTTCGCTaGATGCTCTTCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: SKILREQCQPNFILLKELVAVLR*MLFTIF
Trigger: GAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAAC...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTAGGCCATTTACTGCTGTaGTTGAATATTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVGHLLL*LNIVIV
Trigger: AACAATGACAATATTCAATCACAGCAGTAAATGGCC...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp AGGAGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAACTTAAGAGAATGTTGTaGACGTTCCCCATTCTATTT +
Preference number: 4 (lower is better)
Translates to: RSKILREQCQPNFILLKELKRML*TFPILF
Trigger: AAATAGAATGGGGAACGTTCACAACATTCTCTTAAG...TTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTAATCTCAGTATAGTTTaGGGAATAGTTGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: KAAYMSICKIVLFVAVLANLSIV*GIVVWI
Trigger: GATCCAAACAACTATTCCGCAAACTATACTGAGATT...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATAATCTCAGTATAGTTTaGGGAATAGTTGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: SEHCDHRFWLSSKFLFGNNLSIV*GIVVWI
Trigger: GATCCAAACAACTATTCCGCAAACTATACTGAGATT...ATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR GCA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAAATCTCAGTATAGTTTaGGGAATAGTTGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: LVHHFSNRDTLGPISHTENLSIV*GIVVWI
Trigger: GATCCAAACAACTATTCCGCAAACTATACTGAGATT...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR GCA 90 bp AGGAGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAACTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: RSKILREQCQPNFILLKELYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...TTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: LFITSAIETLWVLFHTQKLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...TTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR GCA 90 bp CTGGAACAACTGGTTCATTTAAGAAGCAAAAGGAGATACTGGTGTCCCAATTGTCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: LEQLVHLRSKRRYWCPNCLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...ACAATTGGGACACCAGTATCTCCTTTTGCTTCTTAAATGAACCAGTTGTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR GCA 90 bp TTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: FLSKSCLHEHLQNSTVCGAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...GCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LTKKNYGSRVVALAALSSAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTAAATATTTCAATATGCTaGTGTCCCAAAAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SKILREQCQPNFILLKELNISIC*CPKSLA
Trigger: GGCCAGGCTTTTGGGACAGCAGCATATTGAAATATT...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGAAAATATTTCAATATaGTGCTGTCCCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTENISI*CCPKSL
Trigger: CAGGCTTTTGGGACAGCAGCATATTGAAATATTTTC...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAGAAAATATTTCAATATaGTGCTGTCCCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRENISI*CCPKSL
Trigger: CAGGCTTTTGGGACAGCAGCATATTGAAATATTTTC...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTTGGGGTAGAAGGGATTaGAACACAAAGGCCATTTAC +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCWGRRD*NTKAIY
Trigger: GTAAATGGCCTTTGTGTTGCAATCCCTTCTACCCCA...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTCACAATGACATTCTCTaGATAGTAACCAACACTGAT +
Preference number: 4 (lower is better)
Translates to: FSRKAAYMSICKIVLFVAHNDIL*IVTNTD
Trigger: ATCAGTGTTGGTTACTATGCAGAGAATGTCATTGTG...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCGCTGTCCCAAAAGCCTaGCCATTAGAGGATAAACAA +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICAVPKA*PLEDKQ
Trigger: TTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGC...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp ATAGTCTCAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTAATCTCAGTATAGTTTaGGGAATAGTTGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: IVSNLLSHLFITSAIETLNLSIV*GIVVWI
Trigger: GATCCAAACAACTATTCCGCAAACTATACTGAGATT...AAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR GCA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAAATCTCAGTATAGTTTaGGGAATAGTTGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRNLSIV*GIVVWI
Trigger: GATCCAAACAACTATTCCGCAAACTATACTGAGATT...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGTGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp GCAACACAAAGGCCATTTACTGCTGTGATTGAATATTGTCATTGTTTTTCTGTCTGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: ATQRPFTAVIEYCHCFSVWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...GACAGAAAAACAATGACAATATTCAATCACAGCAGTAAATGGCCTTTGTGTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTACTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: SKILREQCQPNFILLKELLNYWS*CTSLNA
Trigger: AGCATTCAGCGAAGTACAGCAACTCCAATAATTCAG...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGATCTTAAGGGAGCAATaGCAGCCTAACTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVILREQ*QPNFIL
Trigger: CAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGAT...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCCAGATCCTGAATTATTaGAGTTGCTGTACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICQILNY*SCCTSL
Trigger: CAGCGAAGTACAGCAACTCCAATAATTCAGGATCTG...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479241.5
ENST00000493474.1
CDS-3UTR TCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGTTCCCCATTCTATTTaGGGAGAAAACAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCVPHSI*GENKEL
Trigger: GAGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAAC...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTCCCAAACTTAATTGCTaGGGATTAAGAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVPKLNC*GLRRSS
Trigger: AGAGGATCTTCTTAATCCTCAGCAATTAAGTTTGGG...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGGGTCTTTTGGTTTTaGCTTGTAGATCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVWVFWF*LVDQIL
Trigger: AAGGATCTGATCTACAAGGCAAAACCAAAAGACCCA...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp GCAACACAAAGGCCATTTACTGCTGTGATTGAATATTGTCATTGTTTTTCTGTCCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: ATQRPFTAVIEYCHCFSVLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...GACAGAAAAACAATGACAATATTCAATCACAGCAGTAAATGGCCTTTGTGTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCTTTCTCTCGAAAAGCTaGTTACATGAGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICFLSKS*LHEHLQ
Trigger: TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCATCTTAAGGGAGCAATaGCAGCCTAACTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICILREQ*QPNFIL
Trigger: CAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGAT...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCATATCCCTGAATTATTaGAGTTGCTGTACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICISLNY*SCCTSL
Trigger: CAGCGAAGTACAGCAACTCCAATAATTCAGGGATAT...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS-3UTR TCA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTGGCCATTTACTGCTGTaGTTGAATATTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVGHLLL*LNIVIV
Trigger: AACAATGACAATATTCAATCACAGCAGTAAATGGCC...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCCATTTACTGCTGTaGTTGAATATTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCGHLLL*LNIVIV
Trigger: AACAATGACAATATTCAATCACAGCAGTAAATGGCC...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR TCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCCTTAAGAGAATGTTGTaGACGTTCCCCATTCTATTT +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICLKRML*TFPILF
Trigger: AAATAGAATGGGGAACGTTCACAACATTCTCTTAAG...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGAATCTCAGTATAGTTTaGGGAATAGTTGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVNLSIV*GIVVWI
Trigger: GATCCAAACAACTATTCCGCAAACTATACTGAGATT...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR GCA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCLYFAE*SSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAG...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR GCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAGCTTACATGAGCATCTaGAAAATAGTACTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQAYMSI*KIVLFV
Trigger: CACAAACAGTACTATTTTGCAGATGCTCATGTAAGC...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CCA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAGAAGATCCTCTAATTaGCAAGAGCTTTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQRRSSN*QELFLM
Trigger: CATCAGAAAAAGCTCTTGCCAATTAGAGGATCTTCT...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
3UTR CAA 72 bp TCTTTGCTAACAACAGACGCTACAAAAAGTTCTCATTaGAAATATCTTGTCAAGCTACAGACAACACGTTTT +
Preference number: 4 (lower is better)
Translates to: SLLTTDATKSSH*KYLVKLQTTRF
Trigger: AAAACGTGTTGTCTGTAGCTTGACAAGATATTTCAAATGAGAACTTTTTGTAGCGTCTGTTGTTAGCAAAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356151.7
ENST00000383716.7
CDS GCA 90 bp GCCTGCAATCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTCGTCCAGCAGCACCTTGCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: ACNRVGLQALARLDG*CQRHRVVQQHLAGW
Trigger: CCAGCCGGCAAGGTGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463280.5
CDS GCA 90 bp AGGCAATCTCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTCGTCCAGCAGCACCTTGCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: RQSRVGLQALARLDG*CQRHRVVQQHLAGW
Trigger: CCAGCCGGCAAGGTGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGAGATTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS CCA 90 bp TTAGGCCTGCAATCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCGTGTCGTCCAGCAGCACCTTGCCGG +
Preference number: 5 (lower is better)
Translates to: LGLQSCGTAGSGSPR*LLSAAPCRPAAPCR
Trigger: CCGGCAAGGTGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTGCAGGCCTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463280.5
CDS CCA 90 bp TGCAAGGCAATCTCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCGTGTCGTCCAGCAGCACCTTGCCGG +
Preference number: 5 (lower is better)
Translates to: CKAISCGTAGSGSPR*LLSAAPCRPAAPCR
Trigger: CCGGCAAGGTGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGAGATTGCCTTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS GCA 90 bp TCTAACAATCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTCGTCCAGCAGCACCTTGCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SNNRVGLQALARLDG*CQRHRVVQQHLAGW
Trigger: CCAGCCGGCAAGGTGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTGTTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000479241.5
CDS GCA 90 bp AATATATTCCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTCGTCCAGCAGCACCTTGCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: NIFRVGLQALARLDG*CQRHRVVQQHLAGW
Trigger: CCAGCCGGCAAGGTGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGGAATATATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000477308.5
ENST00000484288.5
CDS-3UTR CAA 90 bp ACGAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGCCACCACCTCCCACTTaGGTTCTGATCGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: TRAGQVPRCSQEARELLVPPPPT*VLIGRT
Trigger: TGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG...CACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
CDS-3UTR CAA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTCCACCACCTCCCACTTaGGTTCTGATCGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGPPPPT*VLIGRT
Trigger: TGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
CDS-3UTR CAA 90 bp GAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGGCCAGATCCTGAATTATaGGAGTTGCTGTACTTCGCT +
Preference number: 5 (lower is better)
Translates to: ELGRCLGARRRQGSCWWWPDPEL*ELLYFA
Trigger: AGCGAAGTACAGCAACTCCAATAATTCAGGATCTGG...CCACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493474.1
CDS CCA 90 bp CTCAGCTGCAAGGAGGAAATTACACGGCCTCAAAAAGGAAAAGGCTaGCGGCGGGCAGAAGTGGATGGTCCTGAGCGGTCTCGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LSCKEEITRPQKGKG*RRAEVDGPERSRSC
Trigger: GCAGGAACGAGACCGCTCAGGACCATCCACTTCTGCCCGCCGCCAGCCTTTTCCTTTTTGAGGCCGTGTAATTTCCTCCTTGCAGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491164.1
CDS CCA 90 bp GCAGACCCCAGCCACTTACACTCTGCTGTCCCAACAAGTAGGCTCTaGAGTCACACTTCATTTGGCCCGGCACACCCTCATCCCCATCAC +
Preference number: 5 (lower is better)
Translates to: ADPSHLHSAVPTSRL*SHTSFGPAHPHPHH
Trigger: GTGATGGGGATGAGGGTGTGCCGGGCCAAATGAAGTGTGACTCCAGAGCCTACTTGTTGGGACAGCAGAGTGTAAGTGGCTGGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491164.1
CDS-3UTR CAA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCTTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGLSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
CDS-3UTR CAA 90 bp CGGCCACCACAGCCATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: RPPQPWTGQEGRSPQAPSMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...ACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCATGGCTGTGGTGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp ATGGACGGGGCAGGAGGGAAGGAGTCCACAGGCACCGAGTCTGGCGGTCGTCCATCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: MDGAGGKESTGTESGGRPSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...TGGACGACCGCCAGACTCGGTGCCTGTGGACTCCTTCCCTCCTGCCCCGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp GAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTGGCAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: ELGRCLGARRRQGSCWWWQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...CCACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp ACGAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGCCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: TRAGQVPRCSQEARELLVPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...CACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR CAA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTCCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR CAA 90 bp AGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTCGTCCAGCAGCACCTaGCCGGCTGGCGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SRSSEHCDHRFWLSSKFLSSSST*PAGGFS
Trigger: GGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACGA...AAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp GAGAGCTGGGCAGGTGCCTCGGTGCTCGCAGGAGGCAAGGGAGCTGCTGGTGGTCGTTCCCCATTCTATTaGAGGAGAAAACAAAGAACT +
Preference number: 5 (lower is better)
Translates to: ESWAGASVLAGGKGAAGGRSPFY*RRKQRT
Trigger: AGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAACG...ACCACCAGCAGCTCCCTTGCCTCCTGCGAGCACCGAGGCACCTGCCCAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR CAA 90 bp CAGCAAGCTGGAGCCCGGGGGTGGCTAGTGGCCCTGAAACCGGTCCATTCCCTGTGTCTTGATCAACATTaGGGGGCTTTCTTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: QQAGARGWLVALKPVHSLCLDQH*GAFLGN
Trigger: ATTTCCCAAGAAAGCCCCCAAATGTTGATCAAGACA...CAGGGAATGGACCGGTTTCAGGGCCACTAGCCACCCCCGGGCTCCAGCTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp CTCATATACCAACTCCCTGCCAATGATTCTCCCTTCACACAGCTTGTAGGAACCAGCCCGCTCCTCCTGTaGGCGGACAGGAAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LIYQLPANDSPFTQLVGTSPLLL*ADRKVA
Trigger: TGCCACCTTCCTGTCCGCCAACAGGAGGAGCGGGCT...GGTTCCTACAAGCTGTGTGAAGGGAGAATCATTGGCAGGGAGTTGGTATATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTCGTCCAGCAGCACCTaGCCGGCTGGCGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSSSSST*PAGGFS
Trigger: GGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACGA...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp GGAGGCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: GGKGAAGGGGGGGGGGNAMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...TGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp GCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: ARPLGSCHSQPETRAGQVQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...CACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp CAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCCGTTCCCCATTCTATTaGAGGAGAAAACAAAGAACT +
Preference number: 5 (lower is better)
Translates to: QGPSAHAIHSLRRELGRCRSPFY*RRKQRT
Trigger: AGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAACG...GCACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR CAA 90 bp GCTGAGCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCGCAATCTGTAAGCTGTaGTTAAGCAAATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: AEQGPSAHAIHSLRRELGAICKL*LSKSKS
Trigger: TGACTTTGATTTGCTTAACAACAGCTTACAGATTGC...GCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000477308.5
CDS-3UTR CAA 90 bp GCAAGGCCCCTCGGCTCATGCCATTCACAGCCTGAGACGAGAGCTGGGCAGGTGCAATCTCAGTATAGTTaGCGGAATAGTTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: ARPLGSCHSQPETRAGQVQSQYS*RNSCLD
Trigger: ATCCAAACAACTATTCCGCAAACTATACTGAGATTG...CACCTGCCCAGCTCTCGTCTCAGGCTGTGAATGGCATGAGCCGAGGGGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS CCA 90 bp TCAAAGGTTCCACCACCTCCCACTTTGGTTCTGATCGGAAGAACATaGAAACCTGTTGCAAGGCAATCTCGTGTGGGACTGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SKVPPPPTLVLIGRT*KPVARQSRVGLQAL
Trigger: CAGAGCCTGCAGTCCCACACGAGATTGCCTTGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGGAACCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS-3UTR CAA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTTCGTCCAGCAGCACCTaGCCGGCTGGCGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTSSSST*PAGGFS
Trigger: GGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACGA...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAATCGTCCAGCAGCACCTaGCCGGCTGGCGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LFITSAIETLWVLFHTQKSSSST*PAGGFS
Trigger: GGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACGA...TTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp GCAAGGGAGCTGCTGGTGGTGGTGGAGGTGGAGGAGGTGGAGGTAATGCAGATACCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: ARELLVVVEVEEVEVMQIPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...TATCTGCATTACCTCCACCTCCTCCACCTCCACCACCACCAGCAGCTCCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR CAA 90 bp GCCGGCAAGTGTCCCCATCGAGCATCACATTGGAGGCGTGAAGATGCCCATAAGAGGGTGCAGTATAGTTaGCGGAATAGTTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: AGKCPHRASHWRREDAHKRVQYS*RNSCLD
Trigger: ATCCAAACAACTATTCCGCAAACTATACTGCACCCT...CTTATGGGCATCTTCACGCCTCCAATGTGATGCTCGATGGGGACACTTGCCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477308.5
CDS-3UTR CAA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTATCGTCCAGCAGCACCTaGCCGGCTGGCGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SKILREQCQPNFILLKELSSSST*PAGGFS
Trigger: GGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACGA...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TCTAACCACACAGACAGGGGCTGTGAACCCTTAAACAGACGCCTCAAGTGCCTTGACGCCTCAAGTGCCTaGCTTGTTAAAGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: SNHTDRGCEPLNRRLKCLDASSA*LVKGGF
Trigger: AAATCCTCCTTTAACAAGCAAGGCACTTGAGGCGTC...AAGGCACTTGAGGCGTCTGTTTAAGGGTTCACAGCCCCTGTCTGTGTGGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS TCA 90 bp CCAACCTATGTCTTTCAAAGGTTCCACCACCTCCCACTTTGGTTCTaGTCGGAAGAACATGGAAACCTGTTGCAAGGCAATCTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: PTYVFQRFHHLPLWF*SEEHGNLLQGNLVW
Trigger: CCACACGAGATTGCCTTGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGGAACCTTTGAAAGACATAGGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS-3UTR CAA 90 bp TCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: SAFPLVHHFSNRDTLGPIGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...AATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp TTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: FPLVHHFSNRDTLGPISHGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...GTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATCCACCACCTCCCACTTaGGTTCTGATCGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYPPPPT*VLIGRT
Trigger: TGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp GTACCTCTAATATTTGCCGTCCATATGTTTTTATTTGCTGGAGTTCCAGGCCCTGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: VPLIFAVHMFLFAGVPGPGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...AGGGCCTGGAACTCCAGCAAATAAAAACATATGGACGGCAAATATTAGAGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp TTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: FITSAIETLWVLFHTQKQGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...CTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp TCTGAGTGGCAGAAGCAGCTCCTCGCACATCTGGAACAACTGGTTCATTTAAGACCTCAAGTGCCTTGCTaGTTAAAGGAGGATTTCTGG +
Preference number: 5 (lower is better)
Translates to: SEWQKQLLAHLEQLVHLRPQVPC*LKEDFW
Trigger: CCAGAAATCCTCCTTTAACAAGCAAGGCACTTGAGG...TCTTAAATGAACCAGTTGTTCCAGATGTGCGAGGAGCTGCTTCTGCCACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAACCACCACCTCCCACTTaGGTTCTGATCGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: LVHHFSNRDTLGPISHTEPPPPT*VLIGRT
Trigger: TGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCCCACCACCTCCCACTTaGGTTCTGATCGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGPPPPT*VLIGRT
Trigger: TGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp CCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACTTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PTCSSLQQSRHFGSYFTHLSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...GTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp AAACAGGAAGCTTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTTCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: KQEASADLRSTVITGFGFSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...AAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAAGCTTCCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp TTCAGCCGATCTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCTCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: FSRSSEHCDHRFWLSSKFSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...GAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAGATCGGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp CTGGAACAACTGGTTCATTTAAGAAGCAAAAGGAGATACTGGTGTCCCAATTGTGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: LEQLVHLRSKRRYWCPNCGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...ACAATTGGGACACCAGTATCTCCTTTTGCTTCTTAAATGAACCAGTTGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp CTAACTAAAAAGAACTATGGGTCTAGAGTAGTTGCTTTAGCAGCCCTGAGTTCTGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: LTKKNYGSRVVALAALSSGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...AGAACTCAGGGCTGCTAAAGCAACTACTCTAGACCCATAGTTCTTTTTAGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp GAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTCTGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: EHCDHRFWLSSKFLFGNSGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...AGAATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS TCA 90 bp CCAACCTATGTCTTTCAAAGGTTCCACCACCTCCCACTTTGGTTCTaGTCGGAAGAACATGGAAACCTGTTGCAAGGCAATCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: PTYVFQRFHHLPLWF*SEEHGNLLQGNLSI
Trigger: TATACTGAGATTGCCTTGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGGAACCTTTGAAAGACATAGGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
ENST00000484288.5
CDS CCA 90 bp TCAAAGGTTCCACCACCTCCCACTTTGGTTCTGATCGGAAGAACATaGAAACCTGTTGCAAGGCAATCTCAGTATAGTTTGCGGAATAGT +
Preference number: 5 (lower is better)
Translates to: SKVPPPPTLVLIGRT*KPVARQSQYSLRNS
Trigger: ACTATTCCGCAAACTATACTGAGATTGCCTTGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGGAACCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
ENST00000484288.5
CDS CCA 90 bp GTGGAGGTGGAGGAGGTGGAGGTAATGCAGATATCCCTGAATTATTaGAGTTGCTGTACTTCGCTGAATGCTCTTCACTATTTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: VEVEEVEVMQISLNY*SCCTSLNALHYFQE
Trigger: CTCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGGATATCTGCATTACCTCCACCTCCTCCACCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS-3UTR CAA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACCACCACCTCCCACTTaGGTTCTGATCGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVPPPPT*VLIGRT
Trigger: TGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp AGTAGTTGCTTTAGCAGCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGACCACCACCTCCCACTTaGGTTCTGATCGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: SSCFSSPEFYNHNGIPVRPPPPT*VLIGRT
Trigger: TGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG...TCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGCTGCTAAAGCAACTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp GAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTCTCCACCACCTCCCACTTaGGTTCTGATCGGAAGAACA +
Preference number: 5 (lower is better)
Translates to: EHCDHRFWLSSKFLFGNSPPPPT*VLIGRT
Trigger: TGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG...AGAATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
CDS-3UTR CAA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYLSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: ALSSITTMVFLLELKRMLGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp CTGGAACAACTGGTTCATTTAAGAAGCAAAAGGAGATACTGGTGTCCCAATTGTTGGGCCACGGCGCATTaGTGTTGTTCAGCTAAGCAT +
Preference number: 5 (lower is better)
Translates to: LEQLVHLRSKRRYWCPNCWATAH*CCSAKH
Trigger: ATGCTTAGCTGAACAACACAAATGCGCCGTGGCCCA...ACAATTGGGACACCAGTATCTCCTTTTGCTTCTTAAATGAACCAGTTGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp GGACCAGGTACTTTGCTACCCAAAACAGGCCCTAGAACATTCAGCAGTAAGGCAATACTGGTGTCCCAATaGTTTTTATTGGGCTTGCAA +
Preference number: 5 (lower is better)
Translates to: GPGTLLPKTGPRTFSSKAILVSQ*FLLGLQ
Trigger: TTGCAAGCCCAATAAAAACAATTGGGACACCAGTAT...TGCCTTACTGCTGAATGTTCTAGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS GCA 90 bp GTGGAGGAGGTGGAGGTAATGCAGATATCCCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCTCTTCACTATTTTCAAGAGCAGATC +
Preference number: 5 (lower is better)
Translates to: VEEVEVMQISLNYWS*CTSLNALHYFQEQI
Trigger: GATCTGCTCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGGATATCTGCATTACCTCCACCTCCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS-3UTR CAA 90 bp AAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTTTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: KAAYMSICKIVLFVAVLALSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...AGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATTTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SEHCDHRFWLSSKFLFGNLSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...ATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
CDS-3UTR CAA 90 bp AATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: NLLSHLFITSAIETLWVLSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...TAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTTCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp AAAACATCGCTGAATAATGGCATCTGTAAGAGCCGGGAGATGGTAGGCATGCCACAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: KTSLNNGICKSREMVGMPQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...TGGCATGCCTACCATCTCCCGGCTCTTACAGATGCCATTATTCAGCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp TCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACAAGCAATCGAGACACTTaGGGTCCTATTTCACACACA +
Preference number: 5 (lower is better)
Translates to: SHLFITSAIETLWVLFHTSNRDT*GPISHT
Trigger: TGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCT...TGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp CGCATTTGTGTTGTTCAGCTAAGCATGTACCAAGACAGGCTCCAATCTGAGAAGAACAGAGTCAAATCGTaGCCAGAAAATCAGAAACGC +
Preference number: 5 (lower is better)
Translates to: RICVVQLSMYQDRLQSEKNRVKS*PENQKR
Trigger: GCGTTTCTGATTTTCTGGCAACGATTTGACTCTGTT...CTTCTCAGATTGGAGCCTGTCTTGGTACATGCTTAGCTGAACAACACAAATGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp AAAGATAAGGACAAGAATATCCTCCCATGGACCAGGTACTTTGCTACCCAAAACCATTTGGGGGCTTTCTaGGGAAATCTGCTGACAAAG +
Preference number: 5 (lower is better)
Translates to: KDKDKNILPWTRYFATQNHLGAF*GNLLTK
Trigger: CTTTGTCAGCAGATTTCCCAAGAAAGCCCCCAAATG...GTTTTGGGTAGCAAAGTACCTGGTCCATGGGAGGATATTCTTGTCCTTATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp AATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTACCAGATCCTGAATTATaGGAGTTGCTGTACTTCGCT +
Preference number: 5 (lower is better)
Translates to: NLLSHLFITSAIETLWVLPDPEL*ELLYFA
Trigger: AGCGAAGTACAGCAACTCCAATAATTCAGGATCTGG...TAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495557.5
CDS-3UTR CAA 90 bp TTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACGAACATGGAAACCTGTaGCAAGGCAATCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: FPLVHHFSNRDTLGPISHEHGNL*QGNLSI
Trigger: TATACTGAGATTGCCTTGCAACAGGTTTCCATGTTC...GTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp TTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCGAACATGGAAACCTGTaGCAAGGCAATCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: FQYAAVPKAWPLEDKQDSEHGNL*QGNLSI
Trigger: TATACTGAGATTGCCTTGCAACAGGTTTCCATGTTC...GGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTGAACATGGAAACCTGTaGCAAGGCAATCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: SAFPLVHHFSNRDTLGPIEHGNL*QGNLSI
Trigger: TATACTGAGATTGCCTTGCAACAGGTTTCCATGTTC...AATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTTTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: FSRKAAYMSICKIVLFVALSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp AGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCAATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: SCLHEHLQNSTVCGCTGSMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...TGAGCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: LRSTVITGFGFPQSSFLEMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
CDS-3UTR CAA 90 bp AATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTAATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: NLLSHLFITSAIETLWVLMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...TAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCTCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp CTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAATCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LVHHFSNRDTLGPISHTESICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...TTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTGGTGGGACTGAGCTCTaGTCAGTCTTCGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVGGTEL*SVFDAG
Trigger: ACCAGCATCGAAGACTGACAAGAGCTCAGTCCCACC...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp CCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACCAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: PTCSSLQQSRHFGSYFTHQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...GTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp CTTCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAACCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: LRSTVITGFGFPQSSFLEPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...TTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000493474.1
CDS-3UTR CAA 90 bp TTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGAGCAATCGAGACACTTaGGGTCCTATTTCACACACA +
Preference number: 5 (lower is better)
Translates to: FITSAIETLWVLFHTQKQSNRDT*GPISHT
Trigger: TGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCT...CTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp AATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTAAATCTGCTTTCCCACTaGTTCATCACTTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: NLLSHLFITSAIETLWVLNLLSH*FITSAI
Trigger: GATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT...TAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp TTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACAATCTGCTTTCCCACTaGTTCATCACTTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: FPLVHHFSNRDTLGPISHNLLSH*FITSAI
Trigger: GATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT...GTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCCCAGATCCTGAATTATaGGAGTTGCTGTACTTCGCT +
Preference number: 5 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGPDPEL*ELLYFA
Trigger: AGCGAAGTACAGCAACTCCAATAATTCAGGATCTGG...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CAA 90 bp TTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGTGCAGCAACGGGACTTaGAGAGTTATGGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: FITSAIETLWVLFHTQKQCSNGT*RVMVSK
Trigger: TTTGGAAACCATAACTCTCAAAGTCCCGTTGCTGCA...CTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484288.5
CDS-3UTR CAA 90 bp CCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACGCAATCTGTAAGCTGTaGTTAAGCAAATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: PTCSSLQQSRHFGSYFTHAICKL*LSKSKS
Trigger: TGACTTTGATTTGCTTAACAACAGCTTACAGATTGC...GTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGAACATGGAAACCTGTaGCAAGGCAATCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLEHGNL*QGNLSI
Trigger: TATACTGAGATTGCCTTGCAACAGGTTTCCATGTTC...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TCGGAGCACTGTGATCACAGGTTTTGGCTTTCCTCAAAGTTCCTTTTTGGAAATGAACATGGAAACCTGTaGCAAGGCAATCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: SEHCDHRFWLSSKFLFGNEHGNL*QGNLSI
Trigger: TATACTGAGATTGCCTTGCAACAGGTTTCCATGTTC...ATTTCCAAAAAGGAACTTTGAGGAAAGCCAAAACCTGTGATCACAGTGCTCCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383716.7
ENST00000463280.5
CDS-3UTR CAA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGTTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: ALSSITTMVFLLELKRMLLSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGAATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: SSLQQSRHFGSYFTHRNRMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...TCTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp TTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: FLSKSCLHEHLQNSTVCGSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...GCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTATCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTCAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCCCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CAA 90 bp ATAGTCTCAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTAGCAATCGAGACACTTaGGGTCCTATTTCACACACA +
Preference number: 5 (lower is better)
Translates to: IVSNLLSHLFITSAIETLSNRDT*GPISHT
Trigger: TGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCT...AAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp TCTCTCATTCTAAAAGTTACCTTATCTCACGCAAACTTACTACTGTATGAGACACATGGACCAGGTACTTaGCTACCCAAAACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: SLILKVTLSHANLLLYETHGPGT*LPKTGP
Trigger: AGGGCCTGTTTTGGGTAGCAAAGTACCTGGTCCATG...TGTCTCATACAGTAGTAAGTTTGCGTGAGATAAGGTAACTTTTAGAATGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp GAATGCTCTTCACTATTTTCAAGAGCAGATCGTTTTGACTTCTTTCGAGCTAAAGAACATGGAAACCTGTaGCAAGGCAATCTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: ECSSLFSRADRFDFFRAKEHGNL*QGNLVW
Trigger: CCACACGAGATTGCCTTGCAACAGGTTTCCATGTTC...TTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTGAAAATAGTGAAGAGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS-3UTR CAA 90 bp CAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTGCAATCTGTAAGCTGTaGTTAAGCAAATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: QYAAVPKAWPLEDKQDSFAICKL*LSKSKS
Trigger: TGACTTTGATTTGCTTAACAACAGCTTACAGATTGC...AAAGGAGTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000479241.5
CDS-3UTR CAA 90 bp TTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACGCAATCTGTAAGCTGTaGTTAAGCAAATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: FPLVHHFSNRDTLGPISHAICKL*LSKSKS
Trigger: TGACTTTGATTTGCTTAACAACAGCTTACAGATTGC...GTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp ATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATCAATCTCAGTATAGTTaGCGGAATAGTTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: ICFPTCSSLQQSRHFGSYQSQYS*RNSCLD
Trigger: ATCCAAACAACTATTCCGCAAACTATACTGAGATTG...ATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGAACATGGAAACCTGTaGCAAGGCAATCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: FSRKAAYMSICKIVLFVAEHGNL*QGNLSI
Trigger: TATACTGAGATTGCCTTGCAACAGGTTTCCATGTTC...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGTTATCTGACAAATACTaGTCTGGGCCAAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVLSDKY*SGPRSA
Trigger: GGCTGACCTTGGCCCAGACAAGTATTTGTCAGATAA...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp AGGAGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAAATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: RSKILREQCQPNFILLKEMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...TTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGCAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAACAGCAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: FITSAIETLWVLFHTQKQQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...CTGTTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp ACTTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGACAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: TCSSLQQSRHFGSYFTHRQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...TCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp TCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTCCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: SKSCLHEHLQNSTVCGCTPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...AGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CAA 90 bp TTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCCCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: FLSKSCLHEHLQNSTVCGPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...GCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CAA 90 bp TTGTTCATCACTTCAGCAATCGAGACACTTTGGGTCCTATTTCACACACAGAAAAATCTGCTTTCCCACTaGTTCATCACTTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: LFITSAIETLWVLFHTQKNLLSH*FITSAI
Trigger: GATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATT...TTTCTGTGTGTGAAATAGGACCCAAAGTGTCTCGATTGCTGAAGTGATGAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000484288.5
ENST00000495557.5
CDS-3UTR CAA 90 bp ATAGTCTCAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTTGCCATGCAGTTGATTaGCAGGTTTTAGAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: IVSNLLSHLFITSAIETLCHAVD*QVLELY
Trigger: ATACAGCTCTAAAACCTGCAAATCAACTGCATGGCA...AAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484288.5
CDS-3UTR CAA 90 bp AAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCGCAATCTGTAAGCTGTaGTTAAGCAAATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: KSCLHEHLQNSTVCGCTGAICKL*LSKSKS
Trigger: TGACTTTGATTTGCTTAACAACAGCTTACAGATTGC...GCCAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000479241.5
CDS-3UTR CAA 90 bp CGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACTGGCAATCTGTAAGCTGTaGTTAAGCAAATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: RKAAYMSICKIVLFVAVLAICKL*LSKSKS
Trigger: TGACTTTGATTTGCTTAACAACAGCTTACAGATTGC...CAGTACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000479241.5
CDS-3UTR CAA 90 bp CTGGAACAACTGGTTCATTTAAGAAGCAAAAGGAGATACTGGTGTCCCAATTGTCAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: LEQLVHLRSKRRYWCPNCQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...ACAATTGGGACACCAGTATCTCCTTTTGCTTCTTAAATGAACCAGTTGTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459676.6
CDS-3UTR CAA 90 bp ATATTTCAATATGCTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACCAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: IFQYAAVPKAWPLEDKQDQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...GTCTTGTTTATCCTCTAATGGCCAGGCTTTTGGGACAGCAGCATATTGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS GCA 90 bp AATGCAGATATCCCTGAATTATTGGAGTTGCTGTACTTCGCTGAATaGTCTTCACTATTTTCAAGAGCAGATCGTTTTGACTTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: NADIPELLELLYFAE*SSLFSRADRFDFFR
Trigger: TCGAAAGAAGTCAAAACGATCTGCTCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGGATATCTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS-3UTR CAA 90 bp ATAGTCTCAAATCTGCTTTCCCACTTGTTCATCACTTCAGCAATCGAGACACTTCAATCTCAGTATAGTTaGCGGAATAGTTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: IVSNLLSHLFITSAIETLQSQYS*RNSCLD
Trigger: ATCCAAACAACTATTCCGCAAACTATACTGAGATTG...AAGTGTCTCGATTGCTGAAGTGATGAACAAGTGGGAAAGCAGATTTGAGACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000484288.5
CDS-3UTR CAA 90 bp AGGAGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAACAATCTCAGTATAGTTaGCGGAATAGTTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: RSKILREQCQPNFILLKEQSQYS*RNSCLD
Trigger: ATCCAAACAACTATTCCGCAAACTATACTGAGATTG...TTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTAGAACATGGAAACCTGTaGCAAGGCAATCTCAGTATA +
Preference number: 5 (lower is better)
Translates to: SKILREQCQPNFILLKELEHGNL*QGNLSI
Trigger: TATACTGAGATTGCCTTGCAACAGGTTTCCATGTTC...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAATCCATATGTTTTTATTaGCTGGAGTTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQSICFY*LEFQAL
Trigger: CAGGGCCTGGAACTCCAGCAAATAAAAACATATGGA...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTAGATATCCCTGAATTATaGGAGTTGCTGTACTTCGCT +
Preference number: 5 (lower is better)
Translates to: SKILREQCQPNFILLKELDIPEL*ELLYFA
Trigger: AGCGAAGTACAGCAACTCCAATAATTCAGGGATATC...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479134.5
CDS-3UTR CAA 90 bp AGCAAGATCTTAAGGGAGCAATGCCAGCCTAACTTTATTCTGCTTAAAGAATTACCTCAAAGTTCCTTTTaGGAAATTCTGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: SKILREQCQPNFILLKELPQSSF*EILDGA
Trigger: AGCTCCATCCAGAATTTCCAAAAAGGAACTTTGAGG...TAATTCTTTAAGCAGAATAAAGTTAGGCTGGCATTGCTCCCTTAAGATCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
ENST00000493474.1
CDS-3UTR CAA 90 bp TTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCCAAAGTAACTATGCTTaGGGCTATAGTGTTAATGTC +
Preference number: 5 (lower is better)
Translates to: FLSKSCLHEHLQNSTVCGQSNYA*GYSVNV
Trigger: GACATTAACACTATAGCCCAAAGCATAGTTACTTTG...GCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTGTACAAAGTAACTATGCTTaGGGCTATAGTGTTAATGTC +
Preference number: 5 (lower is better)
Translates to: SRKAAYMSICKIVLFVAVQSNYA*GYSVNV
Trigger: GACATTAACACTATAGCCCAAAGCATAGTTACTTTG...TACAGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGGCTCAAAGTAACTATGCTTaGGGCTATAGTGTTAATGTC +
Preference number: 5 (lower is better)
Translates to: FSRKAAYMSICKIVLFVAQSNYA*GYSVNV
Trigger: GACATTAACACTATAGCCCAAAGCATAGTTACTTTG...AGCCACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGCGTTCCCCATTCTATTaGAGGAGAAAACAAAGAACT +
Preference number: 5 (lower is better)
Translates to: ALSSITTMVFLLELKRMLRSPFY*RRKQRT
Trigger: AGTTCTTTGTTTTCTCCTCAAATAGAATGGGGAACG...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAATGGGTCTTTTGGTTTaGCCTTGTAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQMGLLV*PCRSDP
Trigger: AGGATCTGATCTACAAGGCAAAACCAAAAGACCCAT...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGATATCCCTGAATTATaGGAGTTGCTGTACTTCGCT +
Preference number: 5 (lower is better)
Translates to: LFLSKSCLHEHLQNSTVCDIPEL*ELLYFA
Trigger: AGCGAAGTACAGCAACTCCAATAATTCAGGGATATC...ACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS-3UTR CAA 90 bp GCCCTGAGTTCTATAACCACAATGGTATTCCTGTTAGAACTTAAGAGAATGTTGCAAAGTAACTATGCTTaGGGCTATAGTGTTAATGTC +
Preference number: 5 (lower is better)
Translates to: ALSSITTMVFLLELKRMLQSNYA*GYSVNV
Trigger: GACATTAACACTATAGCCCAAAGCATAGTTACTTTG...CAACATTCTCTTAAGTTCTAACAGGAATACCATTGTGGTTATAGAACTCAGGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp GCAACACAAAGGCCATTTACTGCTGTGATTGAATATTGTCATTGTTTTTCTGTCCAATCTCAGTATAGTTaGCGGAATAGTTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: ATQRPFTAVIEYCHCFSVQSQYS*RNSCLD
Trigger: ATCCAAACAACTATTCCGCAAACTATACTGAGATTG...GACAGAAAAACAATGACAATATTCAATCACAGCAGTAAATGGCCTTTGTGTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp ATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAACAAGAGCAGATCGTTTaGACTTCTTTCGAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: ILLKELFLSKSCLHEHLQQEQIV*TSFELK
Trigger: TTTTAGCTCGAAAGAAGTCAAAACGATCTGCTCTTG...TTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp TATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTTGTGCAAAGTAACTATGCTTaGGGCTATAGTGTTAATGTC +
Preference number: 5 (lower is better)
Translates to: YFSRKAAYMSICKIVLFVQSNYA*GYSVNV
Trigger: GACATTAACACTATAGCCCAAAGCATAGTTACTTTG...CACAAACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479134.5
ENST00000479241.5
CDS-3UTR CAA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTGCAATCTGTAAGCTGTaGTTAAGCAAATCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVAICKL*LSKSKS
Trigger: TGACTTTGATTTGCTTAACAACAGCTTACAGATTGC...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000479241.5
CDS-3UTR CAA 90 bp TTATTCTGCTTAAAGAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCCAATCTCAGTATAGTTaGCGGAATAGTTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LFCLKNYFSRKAAYMSICQSQYS*RNSCLD
Trigger: ATCCAAACAACTATTCCGCAAACTATACTGAGATTG...GCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTCTTTAAGCAGAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS-3UTR CAA 90 bp GAATTATTTCTCTCGAAAAGCTGCTTACATGAGCATCTGCAAAATAGTACTGTTCAATCTCAGTATAGTTaGCGGAATAGTTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: ELFLSKSCLHEHLQNSTVQSQYS*RNSCLD
Trigger: ATCCAAACAACTATTCCGCAAACTATACTGAGATTG...AACAGTACTATTTTGCAGATGCTCATGTAAGCAGCTTTTCGAGAGAAATAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
CDS CCA 72 bp CAGCGGCACCGTGTCGTCCAGCAGCACCTTGCCGGCTaGCGGCTTCTCCATGAAGGCCATCCCGGGACGCCC +
Preference number: 6 (lower is better)
Translates to: QRHRVVQQHLAG*RLLHEGHPGTP
Trigger: GGGCGTCCCGGGATGGCCTTCATGGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACGACACGGTGCCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000479241.5
ENST00000484288.5
CDS CAA 90 bp GCCTCGATGGCTGCTGTCAGCGGCACCGTGTCGTCCAGCAGCACCTaGCCGGCTGGCGGCTTCTCCATGAAGGCCATCCCGGGACGCCCG +
Preference number: 6 (lower is better)
Translates to: ASMAAVSGTVSSSST*PAGGFSMKAIPGRP
Trigger: CGGGCGTCCCGGGATGGCCTTCATGGAGAAGCCGCCAGCCGGCAAGGTGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000479241.5
ENST00000484288.5
CDS GCA 72 bp CGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATGGCTaGTGTCAGCGGCACCGTGTCGTCCAGCAGCACCTT +
Preference number: 6 (lower is better)
Translates to: RVGLQALARLDG*CQRHRVVQQHL
Trigger: AAGGTGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000477308.5
ENST00000479241.5
ENST00000484288.5
CDS CCA 72 bp ATTCCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCGTGTCGTCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: IPCGTAGSGSPR*LLSAAPCRPAA
Trigger: TGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGGAAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000477308.5
ENST00000484288.5
CDS CCA 72 bp CAATCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCGTGTCGTCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: QSCGTAGSGSPR*LLSAAPCRPAA
Trigger: TGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383715.8
ENST00000463280.5
ENST00000479241.5
CDS CCA 72 bp ATCTCGTGTGGGACTGCAGGCTCTGGCTCGCCTCGATaGCTGCTGTCAGCGGCACCGTGTCGTCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: ISCGTAGSGSPR*LLSAAPCRPAA
Trigger: TGCTGCTGGACGACACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS CCA 72 bp AGACTTAGGCCTGCAATCGTGTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCTGTCAGCGGCACCGTG +
Preference number: 6 (lower is better)
Translates to: RLRPAIVWDCRL*LASMAAVSGTV
Trigger: CACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTGCAGGCCTAAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463280.5
CDS CCA 72 bp CTGTTGCAAGGCAATCTCGTGTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCTGTCAGCGGCACCGTG +
Preference number: 6 (lower is better)
Translates to: LLQGNLVWDCRL*LASMAAVSGTV
Trigger: CACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGAGATTGCCTTGCAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS CCA 72 bp CTGTATCTTCTAACAATCGTGTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCTGTCAGCGGCACCGTG +
Preference number: 6 (lower is better)
Translates to: LYLLTIVWDCRL*LASMAAVSGTV
Trigger: CACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGATTGTTAGAAGATACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383715.8
ENST00000479241.5
CDS CCA 72 bp ACTCGAATAATATATTCCGTGTGGGACTGCAGGCTCTaGCTCGCCTCGATGGCTGCTGTCAGCGGCACCGTG +
Preference number: 6 (lower is better)
Translates to: TRIIYSVWDCRL*LASMAAVSGTV
Trigger: CACGGTGCCGCTGACAGCAGCCATCGAGGCGAGCCAGAGCCTGCAGTCCCACACGGAATATATTATTCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383716.7
ENST00000477308.5
ENST00000484288.5
CDS CAA 72 bp CTGTCCCAACAAGTAGGCTCTGGAGTCACACTTCATTaGGCCCGGCACACCCTCATCCCCATCACCCAGACC +
Preference number: 6 (lower is better)
Translates to: LSQQVGSGVTLH*ARHTLIPITQT
Trigger: GGTCTGGGTGATGGGGATGAGGGTGTGCCGGGCCAAATGAAGTGTGACTCCAGAGCCTACTTGTTGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491164.1
CDS CCA 72 bp AGCCACTTACACTCTGCTGTCCCAACAAGTAGGCTCTaGAGTCACACTTCATTTGGCCCGGCACACCCTCAT +
Preference number: 6 (lower is better)
Translates to: SHLHSAVPTSRL*SHTSFGPAHPH
Trigger: ATGAGGGTGTGCCGGGCCAAATGAAGTGTGACTCCAGAGCCTACTTGTTGGGACAGCAGAGTGTAAGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491164.1
CDS CCA 72 bp CCACCACCTCCCACTTTGGTTCTGATCGGAAGAACATaGAAACCTGTTGCAAGGCAATCTCGTGTGGGACTG +
Preference number: 6 (lower is better)
Translates to: PPPPTLVLIGRT*KPVARQSRVGL
Trigger: CAGTCCCACACGAGATTGCCTTGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468776.5
CDS TCA 72 bp GTCTTTCAAAGGTTCCACCACCTCCCACTTTGGTTCTaGTCGGAAGAACATGGAAACCTGTTGCAAGGCAAT +
Preference number: 6 (lower is better)
Translates to: VFQRFHHLPLWF*SEEHGNLLQGN
Trigger: ATTGCCTTGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGGAACCTTTGAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000479241.5
ENST00000484288.5
CDS CCA 72 bp CCACCACCTCCCACTTTGGTTCTGATCGGAAGAACATaGAAACCTGTTGCAAGGCAATCTCAGTATAGTTTG +
Preference number: 6 (lower is better)
Translates to: PPPPTLVLIGRT*KPVARQSQYSL
Trigger: CAAACTATACTGAGATTGCCTTGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000479241.5
ENST00000484288.5
CDS CAA 90 bp GGTGGAGGTGGAGGAGGTGGAGGTAATGCAGATATCCCTGAATTATaGGAGTTGCTGTACTTCGCTGAATGCTCTTCACTATTTTCAAGA +
Preference number: 6 (lower is better)
Translates to: GGGGGGGGNADIPEL*ELLYFAECSSLFSR
Trigger: TCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGGATATCTGCATTACCTCCACCTCCTCCACCTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS CAA 90 bp TGCCTTTCAGCTATGAATTCACGATCCATGTTACCAATCAATTTTTaGGGAGGAAGAGGTAGACTTAGGCCTGCAATCGTGTGGGACTGC +
Preference number: 6 (lower is better)
Translates to: CLSAMNSRSMLPINF*GGRGRLRPAIVWDC
Trigger: GCAGTCCCACACGATTGCAGGCCTAAGTCTACCTCTTCCTCCCAAAAAATTGATTGGTAACATGGATCGTGAATTCATAGCTGAAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463280.5
CDS GCA 72 bp GAGGTGAGCTGGCCCCAGATCCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCTCTTCACTATTTTCAA +
Preference number: 6 (lower is better)
Translates to: EVSWPQILNYWS*CTSLNALHYFQ
Trigger: TTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGATCTGGGGCCAGCTCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479241.5
ENST00000493474.1
ENST00000495557.5
CDS CAA 72 bp AACCTATGTCTTTCAAAGGTTCCACCACCTCCCACTTaGGTTCTGATCGGAAGAACATGGAAACCTGTTGCA +
Preference number: 6 (lower is better)
Translates to: NLCLSKVPPPPT*VLIGRTWKPVA
Trigger: TGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGGAACCTTTGAAAGACATAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000479241.5
ENST00000484288.5
CDS CAA 72 bp GGAGGAGGTGGAGGTAATGCAGATATCCCTGAATTATaGGAGTTGCTGTACTTCGCTGAATGCTCTTCACTA +
Preference number: 6 (lower is better)
Translates to: GGGGGNADIPEL*ELLYFAECSSL
Trigger: TAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGGATATCTGCATTACCTCCACCTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS CAA 90 bp TTATTCTCCAACCTATGTCTTTCAAAGGTTCCACCACCTCCCACTTaGGTTCTGATCGGAAGAACATGGAAACCTGTTGCAAGGCAATCT +
Preference number: 6 (lower is better)
Translates to: LFSNLCLSKVPPPPT*VLIGRTWKPVARQS
Trigger: AGATTGCCTTGCAACAGGTTTCCATGTTCTTCCGATCAGAACCAAAGTGGGAGGTGGTGGAACCTTTGAAAGACATAGGTTGGAGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000463280.5
ENST00000468776.5
ENST00000479241.5
ENST00000484288.5
CDS CAA 90 bp GGTGGAGGAGGTGGAGGTAATGCAGATATCCCTGAATTATTGGAGTaGCTGTACTTCGCTGAATGCTCTTCACTATTTTCAAGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: GGGGGGNADIPELLE*LYFAECSSLFSRAD
Trigger: ATCTGCTCTTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGGATATCTGCATTACCTCCACCTCCTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS CCA 72 bp GAGGAGGTGGAGGTAATGCAGATATCCCTGAATTATTaGAGTTGCTGTACTTCGCTGAATGCTCTTCACTAT +
Preference number: 6 (lower is better)
Translates to: EEVEVMQISLNY*SCCTSLNALHY
Trigger: ATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGGATATCTGCATTACCTCCACCTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5
CDS CAA 90 bp TGCCTTTCAGCTATGAATTCACGATCCATGTTACCAATCAATTTTTaGGGAGGAAGAGGTAGACTTAGGCCTGCAATCTGTAAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: CLSAMNSRSMLPINF*GGRGRLRPAICKLL
Trigger: CAACAGCTTACAGATTGCAGGCCTAAGTCTACCTCTTCCTCCCAAAAAATTGATTGGTAACATGGATCGTGAATTCATAGCTGAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000302779.9
ENST00000356151.7
ENST00000383715.8
ENST00000383716.7
ENST00000477308.5
ENST00000479241.5
ENST00000484288.5
ENST00000491164.1
CDS GCA 72 bp GTGGAGGTAATGCAGATATCCCTGAATTATTGGAGTTaGTGTACTTCGCTGAATGCTCTTCACTATTTTCAA +
Preference number: 6 (lower is better)
Translates to: VEVMQISLNYWS*CTSLNALHYFQ
Trigger: TTGAAAATAGTGAAGAGCATTCAGCGAAGTACAGCAACTCCAATAATTCAGGGATATCTGCATTACCTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302779.9
ENST00000479134.5