RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PWWP3B (Homo sapiens)

Ensembl gene IDs: ENSG00000157502

Ensembl transcript IDs: ENST00000337685.6, ENST00000357175.6, ENST00000372552.1

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTCCAAATTCTCAGATTCTGGTTCATCTACTCCTTCAAGCAGTTTaGAATGACTTGCCAGTTGGCATTTATATCATTGGAACTATTCTG +
Preference number: 1 (lower is better)
Translates to: FPNSQILVHLLLQAV*NDLPVGIYIIGTIL
Trigger: CAGAATAGTTCCAATGATATAAATGCCAACTGGCAAGTCATTCCAAACTGCTTGAAGGAGTAGATGAACCAGAATCTGAGAATTTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGGAGAGCTCCCTGTCATaGTTTCAACTTTCAGCACAT +
Preference number: 2 (lower is better)
Translates to: RWALKQSAWIHMSRVARLESSLS*FQLSAH
Trigger: ATGTGCTGAAAGTTGAAACCATGACAGGGAGCTCTC...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCCAGGAGCTTGTCTaGTTTAAGGAACTATTCAGC +
Preference number: 2 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSSQELV*FKELFS
Trigger: GCTGAATAGTTCCTTAAATCAGACAAGCTCCTGGCT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTAGCCAGGAGCTTGTCTaGTTTAAGGAACTATTCAGC +
Preference number: 2 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSQELV*FKELFS
Trigger: GCTGAATAGTTCCTTAAATCAGACAAGCTCCTGGCT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGAGAGCTCCCTGTCATaGTTTCAACTTTCAGCACAT +
Preference number: 2 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSESSLS*FQLSAH
Trigger: ATGTGCTGAAAGTTGAAACCATGACAGGGAGCTCTC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCAGGGAAGTGTAGAATaGACAATCCTGTTCAAAGCA +
Preference number: 2 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLQGSVE*TILFKA
Trigger: TGCTTTGAACAGGATTGTTCATTCTACACTTCCCTG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGAGAGCTCCCTGTCATaGTTTCAACTTTCAGCACAT +
Preference number: 2 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKESSLS*FQLSAH
Trigger: ATGTGCTGAAAGTTGAAACCATGACAGGGAGCTCTC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTCAGGGAAGTGTAGAATaGACAATCCTGTTCAAAGCA +
Preference number: 2 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSQGSVE*TILFKA
Trigger: TGCTTTGAACAGGATTGTTCATTCTACACTTCCCTG...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCAGGGAAGTGTAGAATaGACAATCCTGTTCAAAGCA +
Preference number: 2 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKQGSVE*TILFKA
Trigger: TGCTTTGAACAGGATTGTTCATTCTACACTTCCCTG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGAACTATTCAGCCATTaGAGGATAGACACTCCCAAA +
Preference number: 2 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKELFSH*RIDTPK
Trigger: TTTGGGAGTGTCTATCCTTCAATGGCTGAATAGTTC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGAACTATTCAGCCATTaGAGGATAGACACTCCCAAA +
Preference number: 2 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSELFSH*RIDTPK
Trigger: TTTGGGAGTGTCTATCCTTCAATGGCTGAATAGTTC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR GCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTACAATAAGTCTAGCTaGCTTCCACATGTGGTCAGA +
Preference number: 2 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSYNKSS*LPHVVR
Trigger: TCTGACCACATGTGGAAGGCAGCTAGACTTATTGTA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR CAA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGGGAACTATTCAGCCATaGAAGGATAGACACTCCCAA +
Preference number: 3 (lower is better)
Translates to: RWALKQSAWIHMSRVARLGTIQP*KDRHSQ
Trigger: TTGGGAGTGTCTATCCTTCAATGGCTGAATAGTTCC...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGGAACTATTCAGCCATaGAAGGATAGACACTCCCAA +
Preference number: 3 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSGTIQP*KDRHSQ
Trigger: TTGGGAGTGTCTATCCTTCAATGGCTGAATAGTTCC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTAAGATAGCCAGGAGCTaGTCTGATTTAAGGAACTAT +
Preference number: 3 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLKIARS*SDLRNY
Trigger: ATAGTTCCTTAAATCAGACAAGCTCCTGGCTATCTT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
3UTR-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAAGATAGCCAGGAGCTaGTCTGATTTAAGGAACTAT +
Preference number: 3 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSKIARS*SDLRNY
Trigger: ATAGTTCCTTAAATCAGACAAGCTCCTGGCTATCTT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGCCACCAGGTTCTTGTTaGCTCGGTCCCGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLPPGSC*LGPEQP
Trigger: AGGCTGCTCGGGACCGAGCCAACAAGAACCTGGTGG...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGGGCTCAGCACTTCTGTaGTTGACCTGTCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLGSALL*LTCLSG
Trigger: CCCAGAAAGACAGGTCAACCACAGAAGTGCTGAGCC...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000357175.6
CDS-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCCCCTCCCCCAATACTaGCCGGGTACAGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSPLPQY*PGTAPF
Trigger: GAAGGGAGCTGTACCCGGCCAGTATTGGGGGAGGGG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337685.6
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGAGCTCGGCACTTCTGTaGTTGCACTGTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSSALL*LHCLSK
Trigger: CTTGGAAAGACAGTGCAACCACAGAAGTGCCGAGCT...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGCAGCCATCGGTTCCCTaGCATCTTCATTATGCAGCT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLQPSVP*HLHYAA
Trigger: AGCTGCATAATGAAGATGCCAGGGAACCGATGGCTG...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGGACTTGTCAGAGGCTTaGCCTTCTTCCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLDLSEA*PSSSSS
Trigger: AGAACTTGAGGAAGAAGGTCAAGCCTCTGACAAGTC...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGCAAGCAAAGAGCCCGTaGAAGAACCACAACCTATTC +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLQAKSP*KNHNLF
Trigger: GAATAGGTTGTGGTTCTTTCACGGGCTCTTTGCTTG...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGGTTGACCTGTCTTTCTaGGGCTCGGCTTTATTCCAA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLVDLSF*GSALFQ
Trigger: TTGGAATAAAGCCGAGCCCCAGAAAGACAGGTCAAC...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000357175.6
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGGGTTTACAGCTTGTGTaGCCTGTTCTCCACCTCAAT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLGLQLV*PVLHLN
Trigger: ATTGAGGTGGAGAACAGGCCACACAAGCTGTAAACC...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTTTGCTGGCCACAACTaGTCTTTCCAGTTGCATAGG +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLFAGHN*SFQLHR
Trigger: CCTATGCAACTGGAAAGACCAGTTGTGGCCAGCAAA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGCCTTTGCATTCACAATaGAGTCCACCAGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLPLHSQ*SPPGSC
Trigger: ACAAGAACCTGGTGGACTTCATTGTGAATGCAAAGG...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGGGACAAAACTTTTGCTaGCCACAACTGGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLGQNFC*PQLVFP
Trigger: TGGAAAGACCAGTTGTGGCCAGCAAAAGTTTTGTCC...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCCACCAGGTTCTTGTTaGCTCGGTCCCGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKPPGSC*LGPEQP
Trigger: AGGCTGCTCGGGACCGAGCCAACAAGAACCTGGTGG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCAGCACTTCTGTGGTTaGCCTGTCTTTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSQHFCG*PVFLGL
Trigger: GAGCCCCAGAAAGACAGGTCAACCACAGAAGTGCTG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000357175.6
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCCTCTTTCGTCTTATaGCTACAAAGGGTTTACAGC +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSSFVL*LQRVYS
Trigger: GCTGTAAACCCTTTGTAGTCATAAGACGAAAGAGGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAACCTCGCATTCCCTTaGACAACTCCCAGGGCATGC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSNLAFP*TTPRAC
Trigger: GCATGCCCTGGGAGTTGTTCAAGGGAATGCGAGGTT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGCAGGGAAGTGTAGAATaGACAATCCTGTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLQGSVE*TILFKA
Trigger: TGCTTTGAACAGGATTGTTCATTCTACACTTCCCTG...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCAAGCAGTTTGGAATaGCTTGCCAGTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSSSLE*LASWHL
Trigger: TAAATGCCAACTGGCAAGTCATTCCAAACTGCTTGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCTGGACAAAACTTTTaGTGGCCACAACTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSGQNF*WPQLVF
Trigger: AAAGACCAGTTGTGGCCAGCAAAAGTTTTGTCCAGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTACAATAAGTCTAGCTaGCTTCCACATGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLYNKSS*LPHVVR
Trigger: TCTGACCACATGTGGAAGGCAGCTAGACTTATTGTA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTACCAAAGGTTGAGGTaGCTATCTTTGTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLYQRLR*LSLSLL
Trigger: TAGCAGTGACAAAGATAGCCACCTCAACCTTTGGTA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTTGTGCCATTTACAATaGCCAGAAGATGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLLCHLQ*PEDGSL
Trigger: CAGAGAACCATCTTCTGGCCATTGTAAATGGCACAA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTTATATCAAACGAGATaGGCACTTAAGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLLYQTR*ALKQSA
Trigger: GGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCAGCACTTCTGTGGTTaGCCTGTCTTTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKQHFCG*PVFLGL
Trigger: GAGCCCCAGAAAGACAGGTCAACCACAGAAGTGCTG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000357175.6
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCTGAAGTGCTTGCTTaGCTCAAATTTGTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSEVLA*LKFVLS
Trigger: TGAGAGAACAAATTTGAGTCAAGCAAGCACTTCAGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTTTTGTGGTACATTTTaGGACAGCATAGTGATCTCC +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLFCGTF*DSIVIS
Trigger: GGAGATCACTATGCTGTCTCAAAATGTACCACAAAA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGATCCTCAATATTCTCTaGGAAAGCAGAGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLILNIL*ESRAFR
Trigger: TCTGAATGCTCTGCTTTCTCAGAGAATATTGAGGAT...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGAACCTCGCATTCCCTTaGACAACTCCCAGGGCATGC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKNLAFP*TTPRAC
Trigger: GCATGCCCTGGGAGTTGTTCAAGGGAATGCGAGGTT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGACTACTCATAAGATGTaGATAATCCCAGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLTTHKM*IIPDRV
Trigger: AACCCTGTCTGGGATTATTCACATCTTATGAGTAGT...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCCTCTCTTTTCGTCTaGTACTTTTTATCACTGCTG +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSSLFV*YFLSLL
Trigger: CAGCAGTGATAAAAAGTATCAGACGAAAAGAGAGGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGACCACTTCATCCAACTaGTCTTCATCCTCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLTTSSN*SSSSKY
Trigger: ATACTTTGAGGATGAAGATCAGTTGGATGAAGTGGT...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTGGAGGCTTTTTCTGTaGCCTATTTCCAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLWRLFL*PISKFS
Trigger: TGAGAATTTGGAAATAGGTCACAGAAAAAGCCTCCA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGAGCCTCTTGAAATGCTaGCCCTCCCCCAATACTGGC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKSLLKC*PSPNTG
Trigger: GCCAGTATTGGGGGAGGGGCAGCATTTCAAGAGGCT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337685.6
CDS-3UTR GCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGCCTCTTCATCTGAAGTaGTTGCTTGACTCAAATTTG +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLPLHLK*LLDSNL
Trigger: CAAATTTGAGTCAAGCAAGCACTTCAGATGAAGAGG...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGCACAAATTAGTGAGATaGACCAGTCAATACTCTCAC +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLHKLVR*TSQYSH
Trigger: GTGAGAGTATTGACTGGTGCATCTCACTAATTTGTG...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGGCTCAGCACTTCTGTaGTTGACCTGTCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLGSALL*LTCLSG
Trigger: CCCAGAAAGACAGGTCAACCACAGAAGTGCTGAGCC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000357175.6
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGATACCACTGTCATGTaGATCCTGGTGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLDTTVM*ILVGLV
Trigger: GACCAGACCCACCAGGATCCACATGACAGTGGTATC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGATACCACTGTCATGTaGATCCTGGTGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSDTTVM*ILVGLV
Trigger: GACCAGACCCACCAGGATCCACATGACAGTGGTATC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCTAGTGAGAGTATTTaGACTTCTAGAGAAAATGCC +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSSESI*TSRENA
Trigger: GGCATTTTCTCTAGAAGTTCAAATACTCTCACTAGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTGCAGCCCCCATCTCTaGTTCCATGGAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSCSPHL*FHGRLI
Trigger: AATCAACCTTCCATGGAATCAGAGATGGGGGCTGCA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTGCAGCCCCCATCTCTaGTTCCATGGAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLCSPHL*FHGRLI
Trigger: AATCAACCTTCCATGGAATCAGAGATGGGGGCTGCA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGCGACTTGGAAGCAATaGCTTGTCAGAGGCTTGACC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKATWKQ*LVRGLT
Trigger: GGTCAAGCCTCTGACAAGTCATTGCTTCCAAGTCGC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGCGACTTGGAAGCAATaGCTTGTCAGAGGCTTGACC +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSATWKQ*LVRGLT
Trigger: GGTCAAGCCTCTGACAAGTCATTGCTTCCAAGTCGC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCTCATAATGTAAAATaGAGCGTGGAAGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSHNVK*SVEVLR
Trigger: ACGAAGAACTTCCACGCTTCATTTTACATTATGAGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGATTTGCATTCAAAAATaGTTTCAGCCATCTGGATCC +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLICIQK*FQPSGS
Trigger: GGATCCAGATGGCTGAAATCATTTTTGAATGCAAAT...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGAAAGCTTGCTTGGTTTaGGACAACTATGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLKACLV*DNYVFG
Trigger: TCCAAATACATAGTTGTCTCAAACCAAGCAAGCTTT...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTGCAGCCTCTTGAAATaGTGCCCCTCCCCCAATACT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSCSLLK*CPSPNT
Trigger: AGTATTGGGGGAGGGGCAGCATTTCAAGAGGCTGCA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337685.6
CDS-3UTR GCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCGGCACTTCTGTGGTTaGACTGTCTTTCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSRHFCG*TVFPRL
Trigger: AAGCCTTGGAAAGACAGTGCAACCACAGAAGTGCCG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTAGCTCGGCACTTCTGTaGTTGCACTGTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSSALL*LHCLSK
Trigger: CTTGGAAAGACAGTGCAACCACAGAAGTGCCGAGCT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTGTTTCTTTCCTAACTaGGTAACTAATATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLCFFPN*VTNISS
Trigger: GCTGCTGATATTAGTTACCCAGTTAGGAAAGAAACA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTGCAGCCCCCATCTCTaGTTCCATGGAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKCSPHL*FHGRLI
Trigger: AATCAACCTTCCATGGAATCAGAGATGGGGGCTGCA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGACTTGTCAGAGGCTTaGCCTTCTTCCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSDLSEA*PSSSSS
Trigger: AGAACTTGAGGAAGAAGGTCAAGCCTCTGACAAGTC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTTGGTTGGCATCACATaGAGATTGCCCAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSLVGIT*RLPRSC
Trigger: ACATGACCTGGGCAATCTGCATGTGATGCCAACCAA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCGGCACTTCTGTGGTTaGACTGTCTTTCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKRHFCG*TVFPRL
Trigger: AAGCCTTGGAAAGACAGTGCAACCACAGAAGTGCCG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTGGTTTATATTTGTGTaGCAAGGGTTATTACCAAAG +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLWFIFV*QGLLPK
Trigger: CTTTGGTAATAACCCTTGGCACACAAATATAAACCA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTTCAGAATTCATGTTTaGCTCAACAAAAAGCACACT +
Preference number: 4 (lower is better)
Translates to: RWALKQSAWIHMSRVARLFRIHV*LNKKHT
Trigger: AGTGTGCTTTTTGTTGAGGCAAACATGAATTCTGAA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTTTCCAAGGCTTGGTTaGCATCACATGCAGATTGCC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSFPRLG*HHMQIA
Trigger: GGCAATCTGCATGTGATGCCAACCAAGCCTTGGAAA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTTTCCAAGGCTTGGTTaGCATCACATGCAGATTGCC +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLFPRLG*HHMQIA
Trigger: GGCAATCTGCATGTGATGCCAACCAAGCCTTGGAAA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGAGCTCGGCACTTCTGTaGTTGCACTGTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKSSALL*LHCLSK
Trigger: CTTGGAAAGACAGTGCAACCACAGAAGTGCCGAGCT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGGTTTACAGCTTGTGTaGCCTGTTCTCCACCTCAAT +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLGLQLV*PVLHLN
Trigger: ATTGAGGTGGAGAACAGGCCACACAAGCTGTAAACC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTTTGCTGGCCACAACTaGTCTTTCCAGTTGCATAGG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLFAGHN*SFQLHR
Trigger: CCTATGCAACTGGAAAGACCAGTTGTGGCCAGCAAA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCAGCCATCGGTTCCCTaGCATCTTCATTATGCAGCT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKQPSVP*HLHYAA
Trigger: AGCTGCATAATGAAGATGCCAGGGAACCGATGGCTG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCTCCTTCAAGCAGTTTaGAATGACTTGCCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLLLQAV*NDLPVG
Trigger: GCCAACTGGCAAGTCATTCCAAACTGCTTGAAGGAG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCTCCTTCAAGCAGTTTaGAATGACTTGCCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSLLQAV*NDLPVG
Trigger: GCCAACTGGCAAGTCATTCCAAACTGCTTGAAGGAG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGATCTCCTCTTCATCTaGAGTGCTTGCTTGACTCAA +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSDLLFI*SACLTQ
Trigger: TTGAGTCAAGCAAGCACTTCAGATGAAGAGGAGATC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTATTATCTTCCGAAAGTaGAGGGAAAGTCTCGCACCA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLIIFRK*RESLAP
Trigger: TGGTGCGAGACTTTCCCTTCACTTTCGGAAGATAAT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGATTCCATGGAAGGTTaGTTCTGGCTGGTATCTAAG +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSDSMEG*FWLVSK
Trigger: CTTAGATACCAGCCAGAATCAACCTTCCATGGAATC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGACTTGTCAGAGGCTTaGCCTTCTTCCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKDLSEA*PSSSSS
Trigger: AGAACTTGAGGAAGAAGGTCAAGCCTCTGACAAGTC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCAAGCAAAGAGCCCGTaGAAGAACCACAACCTATTC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKQAKSP*KNHNLF
Trigger: GAATAGGTTGTGGTTCTTTCACGGGCTCTTTGCTTG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCCTTTGCATTCACAATaGAGTCCACCAGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSPLHSQ*SPPGSC
Trigger: ACAAGAACCTGGTGGACTTCATTGTGAATGCAAAGG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTTGGTTGGCATCACATaGAGATTGCCCAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKLVGIT*RLPRSC
Trigger: ACATGACCTGGGCAATCTGCATGTGATGCCAACCAA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGTTGACCTGTCTTTCTaGGGCTCGGCTTTATTCCAA +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKVDLSF*GSALFQ
Trigger: TTGGAATAAAGCCGAGCCCCAGAAAGACAGGTCAAC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000357175.6
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGACCTTTCCTGTTACATaGATACTGCTGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKTFPVT*ILLGLV
Trigger: GACCAGACCCAGCAGTATCCATGTAACAGGAAAGGT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337685.6
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGGTTTACAGCTTGTGTaGCCTGTTCTCCACCTCAAT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSGLQLV*PVLHLN
Trigger: ATTGAGGTGGAGAACAGGCCACACAAGCTGTAAACC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGGACAAAACTTTTGCTaGCCACAACTGGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLGQNFC*PQLVFP
Trigger: TGGAAAGACCAGTTGTGGCCAGCAAAAGTTTTGTCC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGGAAGGACATTTTCTTaGTCTGGGAAGTTACAGCCA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLGRTFS*SGKLQP
Trigger: TGGCTGTAACTTCCCAGACCAAGAAAATGTCCTTCC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGAGAGCTCCCTGTCATaGTTTCAACTTTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLESSLS*FQLSAH
Trigger: ATGTGCTGAAAGTTGAAACCATGACAGGGAGCTCTC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCTCCTTCAAGCAGTTTaGAATGACTTGCCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKLLQAV*NDLPVG
Trigger: GCCAACTGGCAAGTCATTCCAAACTGCTTGAAGGAG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGTTATTACCAAAGGTTaGGGTGGCTATCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSVITKG*GGYLCH
Trigger: GTGACAAAGATAGCCACCTCAACCTTTGGTAATAAC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGATCTCCTCTTCATCTaGAGTGCTTGCTTGACTCAA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSDLLFI*SACLTQ
Trigger: TTGAGTCAAGCAAGCACTTCAGATGAAGAGGAGATC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCATTGTGGGTGCTTGTaGTTTATCATCATACAGGGA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLHCGCL*FIIIQG
Trigger: TCCCTGTATGATGATAAATCACAAGCACCCACAATG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTATTATCTTCCGAAAGTaGAGGGAAAGTCTCGCACCA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSIIFRK*RESLAP
Trigger: TGGTGCGAGACTTTCCCTTCACTTTCGGAAGATAAT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGATTATCTTCCGAAAGTaGAGGGAAAGTCTCGCACCA +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKIIFRK*RESLAP
Trigger: TGGTGCGAGACTTTCCCTTCACTTTCGGAAGATAAT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGATTCCATGGAAGGTTaGTTCTGGCTGGTATCTAAG +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKDSMEG*FWLVSK
Trigger: CTTAGATACCAGCCAGAATCAACCTTCCATGGAATC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTCCTTTGCATTCACAATaGAGTCCACCAGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSPLHSQ*SPPGSC
Trigger: ACAAGAACCTGGTGGACTTCATTGTGAATGCAAAGG...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGAACTATTCAGCCATTaGAGGATAGACACTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLELFSH*RIDTPK
Trigger: TTTGGGAGTGTCTATCCTTCAATGGCTGAATAGTTC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGAACTATTCAGCCATTaGAGGATAGACACTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSELFSH*RIDTPK
Trigger: TTTGGGAGTGTCTATCCTTCAATGGCTGAATAGTTC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGAGCCAGGAGCTTGTCTaGTTTAAGGAACTATTCAGC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKSQELV*FKELFS
Trigger: GCTGAATAGTTCCTTAAATCAGACAAGCTCCTGGCT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGCCAGGAGCTTGTCTaGTTTAAGGAACTATTCAGC +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSSQELV*FKELFS
Trigger: GCTGAATAGTTCCTTAAATCAGACAAGCTCCTGGCT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTCAAGCAGTTTGGAATaGCTTGCCAGTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSSSLE*LASWHL
Trigger: TAAATGCCAACTGGCAAGTCATTCCAAACTGCTTGA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAAACGTGTAGCCATATaGCTGTATAACAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSKRVAI*LYNKSP
Trigger: TGGGCTCTTGTTATACAGTCATATGGCTACACGTTT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTACTGGTCTTTCCAGTTaGATAGGACATACTCAGACT +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLTGLSS*IGHTQT
Trigger: AGTCTGAGTATGTCCTATGCAACTGGAAAGACCAGT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTCTGGACAAAACTTTTaGTGGCCACAACTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSGQNF*WPQLVF
Trigger: AAAGACCAGTTGTGGCCAGCAAAAGTTTTGTCCAGA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTCTTTGACTGCAGAATaGACAGACATAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSLTAE*TDITAE
Trigger: CTCAGCAGTTATGTCTGTGCATTCTGCAGTCAAAGA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTCTTTGACTGCAGAATaGACAGACATAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSSLTAE*TDITAE
Trigger: CTCAGCAGTTATGTCTGTGCATTCTGCAGTCAAAGA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTACAATAAGTCTAGCTaGCTTCCACATGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLYNKSS*LPHVVR
Trigger: TCTGACCACATGTGGAAGGCAGCTAGACTTATTGTA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTGTCTTTCCAAGGCTTaGTTGGCATCACATGCAGAT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKCLSKA*LASHAD
Trigger: ATCTGCATGTGATGCCAACCAAGCCTTGGAAAGACA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTGTCTTTCCAAGGCTTaGTTGGCATCACATGCAGAT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSCLSKA*LASHAD
Trigger: ATCTGCATGTGATGCCAACCAAGCCTTGGAAAGACA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCACTATAATCCTCCCTaGCTTTGTCCACTAGCATTT +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLHYNPP*LCPLAF
Trigger: AAATGCTAGTGGACAAAGCCAGGGAGGATTATAGTG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGGAAGGACATTTTCTTaGTCTGGGAAGTTACAGCCA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSGRTFS*SGKLQP
Trigger: TGGCTGTAACTTCCCAGACCAAGAAAATGTCCTTCC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTTGTGCCATTTACAATaGCCAGAAGATGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLLCHLQ*PEDGSL
Trigger: CAGAGAACCATCTTCTGGCCATTGTAAATGGCACAA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGAGAGCTCCCTGTCATaGTTTCAACTTTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSESSLS*FQLSAH
Trigger: ATGTGCTGAAAGTTGAAACCATGACAGGGAGCTCTC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCTTAAGCAGTCAGCCTaGATTCATATGTCTAGAGTG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLLKQSA*IHMSRV
Trigger: CACTCTAGACATATGAATCCAGGCTGACTGCTTAAG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAACCTATGTGTTACATaGATACTGCTGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSNLCVT*ILLGLV
Trigger: GACCAGACCCAGCAGTATCCATGTAACACATAGGTT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357175.6
3UTR CAA 72 bp ATCTACTCACTGCTGGTTATGAAGATAGCCAGGAGCTaGTCTGATTTAAGGAACTATTCAGCCATTGAAGGA +
Preference number: 4 (lower is better)
Translates to: IYSLLVMKIARS*SDLRNYSAIEG
Trigger: TCCTTCAATGGCTGAATAGTTCCTTAAATCAGACAAGCTCCTGGCTATCTTCATAACCAGCAGTGAGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTCCTCTTTCGTCTTATaGCTACAAAGGGTTTACAGC +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSSSFVL*LQRVYS
Trigger: GCTGTAAACCCTTTGTAGTCATAAGACGAAAGAGGA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTCTGAAGTGCTTGCTTaGCTCAAATTTGTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSSEVLA*LKFVLS
Trigger: TGAGAGAACAAATTTGAGTCAAGCAAGCACTTCAGA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTCTGAAGTGCTTGCTTaGCTCAAATTTGTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSEVLA*LKFVLS
Trigger: TGAGAGAACAAATTTGAGTCAAGCAAGCACTTCAGA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTTTTGTGGTACATTTTaGGACAGCATAGTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSFCGTF*DSIVIS
Trigger: GGAGATCACTATGCTGTCTCAAAATGTACCACAAAA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTCATTGTGGGTGCTTGTaGTTTATCATCATACAGGGA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSHCGCL*FIIIQG
Trigger: TCCCTGTATGATGATAAATCACAAGCACCCACAATG...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTATCCTCAATATTCTCTaGGAAAGCAGAGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLILNIL*ESRAFR
Trigger: TCTGAATGCTCTGCTTTCTCAGAGAATATTGAGGAT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTACTACTCATAAGATGTaGATAATCCCAGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSTTHKM*IIPDRV
Trigger: AACCCTGTCTGGGATTATTCACATCTTATGAGTAGT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTCAAGCAGTTTGGAATaGCTTGCCAGTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKSSSLE*LASWHL
Trigger: TAAATGCCAACTGGCAAGTCATTCCAAACTGCTTGA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTGGAGGCTTTTTCTGTaGCCTATTTCCAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSWRLFL*PISKFS
Trigger: TGAGAATTTGGAAATAGGTCACAGAAAAAGCCTCCA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGAAACGTGTAGCCATATaGCTGTATAACAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKKRVAI*LYNKSP
Trigger: TGGGCTCTTGTTATACAGTCATATGGCTACACGTTT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAAACGTGTAGCCATATaGCTGTATAACAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSKRVAI*LYNKSP
Trigger: TGGGCTCTTGTTATACAGTCATATGGCTACACGTTT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTATTGCCCAGGTCATGTaGTTCTCTGATATTAACCTA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLIAQVM*FSDINL
Trigger: TAGGTTAATATCAGAGAAGCACATGACCTGGGCAAT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTACTTTCCTCTTTGACTaGAGAATGCACAGACATAAC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSTFLFD*RMHRHN
Trigger: GTTATGTCTGTGCATTCTGCAGTCAAAGAGGAAAGT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCACAAATTAGTGAGATaGACCAGTCAATACTCTCAC +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSHKLVR*TSQYSH
Trigger: GTGAGAGTATTGACTGGTGCATCTCACTAATTTGTG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTATCTGGATCCTTTTGTaGCATTTACAATGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLIWILL*HLQWPE
Trigger: TTCTGGCCATTGTAAATGGCACAAAAGGATCCAGAT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAAGGTTGATTCTGGCTaGTATCTAAGCATGGATTTG +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSKVDSG*YLSMDL
Trigger: CAAATCCATGCTTAGATACCAGCCAGAATCAACCTT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTCACTATAATCCTCCCTaGCTTTGTCCACTAGCATTT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSHYNPP*LCPLAF
Trigger: AAATGCTAGTGGACAAAGCCAGGGAGGATTATAGTG...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTTGTGCCATTTACAATaGCCAGAAGATGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKLCHLQ*PEDGSL
Trigger: CAGAGAACCATCTTCTGGCCATTGTAAATGGCACAA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGTGAGCTTCATTTGTTaGTGCTTTTCGTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLVSFIC*CFSSLF
Trigger: GAAAAGAGACGAAAAGCACCAACAAATGAAGCTCAC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCTTAAGCAGTCAGCCTaGATTCATATGTCTAGAGTG +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKLKQSA*IHMSRV
Trigger: CACTCTAGACATATGAATCCAGGCTGACTGCTTAAG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTTATATCAAACGAGATaGGCACTTAAGCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKLYQTR*ALKQSA
Trigger: GGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTCTAGTGAGAGTATTTaGACTTCTAGAGAAAATGCC +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSSESI*TSRENA
Trigger: GGCATTTTCTCTAGAAGTTCAAATACTCTCACTAGA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTATCCTCAATATTCTCTaGGAAAGCAGAGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSILNIL*ESRAFR
Trigger: TCTGAATGCTCTGCTTTCTCAGAGAATATTGAGGAT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTACTACTCATAAGATGTaGATAATCCCAGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSTTHKM*IIPDRV
Trigger: AACCCTGTCTGGGATTATTCACATCTTATGAGTAGT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTCCTCTCTTTTCGTCTaGTACTTTTTATCACTGCTG +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKSSLFV*YFLSLL
Trigger: CAGCAGTGATAAAAAGTATCAGACGAAAAGAGAGGA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGACCACTTCATCCAACTaGTCTTCATCCTCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKTTSSN*SSSSKY
Trigger: ATACTTTGAGGATGAAGATCAGTTGGATGAAGTGGT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTCTGATATTAACCTATaGTTGAAGCTTCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSDINL*LKLLVS
Trigger: GCTGACAAGAAGCTTCAAGCATAGGTTAATATCAGA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000372552.1
CDS-3UTR GCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCCTCTTCATCTGAAGTaGTTGCTTGACTCAAATTTG +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKPLHLK*LLDSNL
Trigger: CAAATTTGAGTCAAGCAAGCACTTCAGATGAAGAGG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCACAAATTAGTGAGATaGACCAGTCAATACTCTCAC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKHKLVR*TSQYSH
Trigger: GTGAGAGTATTGACTGGTGCATCTCACTAATTTGTG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTATCTGGATCCTTTTGTaGCATTTACAATGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSIWILL*HLQWPE
Trigger: TTCTGGCCATTGTAAATGGCACAAAAGGATCCAGAT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTGTTTCCACTTCACTTaGAATAGTATCGACCATTGT +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSCFHFT*NSIDHC
Trigger: ACAATGGTCGATACTATTCCAAGTGAAGTGGAAACA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGAAGGTTGATTCTGGCTaGTATCTAAGCATGGATTTG +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKKVDSG*YLSMDL
Trigger: CAAATCCATGCTTAGATACCAGCCAGAATCAACCTT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTGTTTCTTTCCTAACTaGGTAACTAATATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLCFFPN*VTNISS
Trigger: GCTGCTGATATTAGTTACCCAGTTAGGAAAGAAACA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGTGAGCTTCATTTGTTaGTGCTTTTCGTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKVSFIC*CFSSLF
Trigger: GAAAAGAGACGAAAAGCACCAACAAATGAAGCTCAC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTTCATATGTCTAGAGTaGCCAGGCTGTAAATACAAT +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSFICLE*PGCKYN
Trigger: ATTGTATTTACAGCCTGGCCACTCTAGACATATGAA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCAAATTCTCAGATTCTaGTTCATCTACTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLQILRF*FIYSFK
Trigger: CTTGAAGGAGTAGATGAACCAGAATCTGAGAATTTG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTCTCATAATGTAAAATaGAGCGTGGAAGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKSHNVK*SVEVLR
Trigger: ACGAAGAACTTCCACGCTTCATTTTACATTATGAGA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTATTTGCATTCAAAAATaGTTTCAGCCATCTGGATCC +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSICIQK*FQPSGS
Trigger: GGATCCAGATGGCTGAAATCATTTTTGAATGCAAAT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR TCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAAAGCTTGCTTGGTTTaGGACAACTATGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSKACLV*DNYVFG
Trigger: TCCAAATACATAGTTGTCTCAAACCAAGCAAGCTTT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTCTGATATTAACCTATaGTTGAAGCTTCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSSDINL*LKLLVS
Trigger: GCTGACAAGAAGCTTCAAGCATAGGTTAATATCAGA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTCAATTTTCCAAGGATaGTTGAACACGTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSSIFQG*LNTLFE
Trigger: TTCAAACAACGTGTTCAAGCATCCTTGGAAAATTGA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTGGTTTATATTTGTGTaGCAAGGGTTATTACCAAAG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLWFIFV*QGLLPK
Trigger: CTTTGGTAATAACCCTTGGCACACAAATATAAACCA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTTCATTTGTTGGTaGTTTTCGTCTCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSSFICW*FSSLFI
Trigger: TATGAAAAGAGACGAAAAGCACCAACAAATGAAGCT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTAGCTTCATTTGTTGGTaGTTTTCGTCTCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLSFICW*FSSLFI
Trigger: TATGAAAAGAGACGAAAAGCACCAACAAATGAAGCT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTACTCAGACTCCATTATaGTTTATATTTGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLTQTPL*FIFVCQ
Trigger: TTGGCACACAAATATAAACCATAATGGAGTCTGAGT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTGTTTCCACTTCACTTaGAATAGTATCGACCATTGT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSCFHFT*NSIDHC
Trigger: ACAATGGTCGATACTATTCCAAGTGAAGTGGAAACA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTGTTTCCACTTCACTTaGAATAGTATCGACCATTGT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKCFHFT*NSIDHC
Trigger: ACAATGGTCGATACTATTCCAAGTGAAGTGGAAACA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTACTTTTTATCACTGCTaGCCAAAATGGATATTTCTG +
Preference number: 4 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLTFYHC*PKWIFL
Trigger: CAGAAATATCCATTTTGGCCAGCAGTGATAAAAAGT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTACTTTTTATCACTGCTaGCCAAAATGGATATTTCTG +
Preference number: 4 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSTFYHC*PKWIFL
Trigger: CAGAAATATCCATTTTGGCCAGCAGTGATAAAAAGT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTTCATATGTCTAGAGTaGCCAGGCTGTAAATACAAT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKFICLE*PGCKYN
Trigger: ATTGTATTTACAGCCTGGCCACTCTAGACATATGAA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCAAATTCTCAGATTCTaGTTCATCTACTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKQILRF*FIYSFK
Trigger: CTTGAAGGAGTAGATGAACCAGAATCTGAGAATTTG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTCAATTTTCCAAGGATaGTTGAACACGTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSSIFQG*LNTLFE
Trigger: TTCAAACAACGTGTTCAAGCATCCTTGGAAAATTGA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTTCAGAATTCATGTTTaGCTCAACAAAAAGCACACT +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSFRIHV*LNKKHT
Trigger: AGTGTGCTTTTTGTTGAGGCAAACATGAATTCTGAA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR GCA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTTCAGAATTCATGTTTaGCTCAACAAAAAGCACACT +
Preference number: 4 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKFRIHV*LNKKHT
Trigger: AGTGTGCTTTTTGTTGAGGCAAACATGAATTCTGAA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTACTCAGACTCCATTATaGTTTATATTTGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSTQTPL*FIFVCQ
Trigger: TTGGCACACAAATATAAACCATAATGGAGTCTGAGT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CCA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTACTTTTTATCACTGCTaGCCAAAATGGATATTTCTG +
Preference number: 4 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSTFYHC*PKWIFL
Trigger: CAGAAATATCCATTTTGGCCAGCAGTGATAAAAAGT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCCACCAGGTTCTTGTaGGCTCGGTCCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSTRFL*ARSRAA
Trigger: GGCTGCTCGGGACCGAGCCAACAAGAACCTGGTGGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGAAACCTCGCATTCCCTaGAACAACTCCCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: RWALKQSAWIHMSRVARLKPRIP*NNSQGM
Trigger: CATGCCCTGGGAGTTGTTCAAGGGAATGCGAGGTTT...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 90 bp ATGCTGCAGCCCCCATCTCTGATTCCATGGAAGGTTGATTCTGGCTaGTATCTAAGCATGGATTTGAGGGACCCTCTCCAGGATCCTCAA +
Preference number: 5 (lower is better)
Translates to: MLQPPSLIPWKVDSG*YLSMDLRDPLQDPQ
Trigger: TTGAGGATCCTGGAGAGGGTCCCTCAAATCCATGCTTAGATACCAGCCAGAATCAACCTTCCATGGAATCAGAGATGGGGGCTGCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 90 bp TTGAACAACTCCCAGGGCATGCTGCAGCCCCCATCTCTGATTCCATaGAAGGTTGATTCTGGCTGGTATCTAAGCATGGATTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: LNNSQGMLQPPSLIP*KVDSGWYLSMDLRD
Trigger: GTCCCTCAAATCCATGCTTAGATACCAGCCAGAATCAACCTTCCATGGAATCAGAGATGGGGGCTGCAGCATGCCCTGGGAGTTGTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTCCACCAGGTTCTTGTaGGCTCGGTCCCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSSTRFL*ARSRAA
Trigger: GGCTGCTCGGGACCGAGCCAACAAGAACCTGGTGGA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS TCA 90 bp TTACAATGGCCAGAAGATGGTTCTCTGTTCCCTTTGCATTCACAATaGAGTCCACCAGGTTCTTGTTGGCTCGGTCCCGAGCAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: LQWPEDGSLFPLHSQ*SPPGSCWLGPEQPS
Trigger: TGAAGGCTGCTCGGGACCGAGCCAACAAGAACCTGGTGGACTTCATTGTGAATGCAAAGGGAACAGAGAACCATCTTCTGGCCATTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGCATGCACTTTCCTCTTaGACTGCAGAATGCACAGAC +
Preference number: 5 (lower is better)
Translates to: RWALKQSAWIHMSRVARLHALSS*TAECTD
Trigger: GTCTGTGCATTCTGCAGTCAAAGAGGAAAGTGCATG...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAAGTCCACCAGGTTCTaGTTGGCTCGGTCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSKSTRF*LARSRA
Trigger: TGCTCGGGACCGAGCCAACAAGAACCTGGTGGACTT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTAAGTCCACCAGGTTCTaGTTGGCTCGGTCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLKSTRF*LARSRA
Trigger: TGCTCGGGACCGAGCCAACAAGAACCTGGTGGACTT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTTGAGGTGGCTATCTTaGTCACTGCTAATGCAAGTT +
Preference number: 5 (lower is better)
Translates to: RWALKQSAWIHMSRVARLLRWLS*SLLMQV
Trigger: AACTTGCATTAGCAGTGACAAAGATAGCCACCTCAA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAAGTCCACCAGGTTCTaGTTGGCTCGGTCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSKSTRF*LARSRA
Trigger: TGCTCGGGACCGAGCCAACAAGAACCTGGTGGACTT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCAAAGGGTTTACAGCTaGTGTGGCCTGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSQRVYS*CGLFST
Trigger: GGTGGAGAACAGGCCACACAAGCTGTAAACCCTTTG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGAAGATAGCCAGGAGCTaGTCTGATTTAAGGAACTAT +
Preference number: 5 (lower is better)
Translates to: RWALKQSAWIHMSRVARLKIARS*SDLRNY
Trigger: ATAGTTCCTTAAATCAGACAAGCTCCTGGCTATCTT...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCTTTCCAAGGCTTGGTaGGCATCACATGCAGATTGC +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLLSKAW*ASHADC
Trigger: GCAATCTGCATGTGATGCCAACCAAGCCTTGGAAAG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCTGTCTTTCCAAGGCTaGGTTGGCATCACATGCAGA +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSLSFQG*VGITCR
Trigger: TCTGCATGTGATGCCAACCAAGCCTTGGAAAGACAG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCAAAGGGTTTACAGCTaGTGTGGCCTGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKQRVYS*CGLFST
Trigger: GGTGGAGAACAGGCCACACAAGCTGTAAACCCTTTG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTTTTCCTCTTACTGTTaGATGAAGTTTCAGATCTGG +
Preference number: 5 (lower is better)
Translates to: RWALKQSAWIHMSRVARLFSSYC*MKFQIW
Trigger: CCAGATCTGAAACTTCATCAAACAGTAAGAGGAAAA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTCTTCTTTCAAAGCTTaGGGCATAATGAGCATATCT +
Preference number: 5 (lower is better)
Translates to: RWALKQSAWIHMSRVARLSSFKA*GIMSIS
Trigger: AGATATGCTCATTATGCCCAAAGCTTTGAAAGAAGA...CAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGAAACCTCGCATTCCCTaGAACAACTCCCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKKPRIP*NNSQGM
Trigger: CATGCCCTGGGAGTTGTTCAAGGGAATGCGAGGTTT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAAACCTCGCATTCCCTaGAACAACTCCCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSKPRIP*NNSQGM
Trigger: CATGCCCTGGGAGTTGTTCAAGGGAATGCGAGGTTT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCTTTCCAAGGCTTGGTaGGCATCACATGCAGATTGC +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKLSKAW*ASHADC
Trigger: GCAATCTGCATGTGATGCCAACCAAGCCTTGGAAAG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCATGCACTTTCCTCTTaGACTGCAGAATGCACAGAC +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLHALSS*TAECTD
Trigger: GTCTGTGCATTCTGCAGTCAAAGAGGAAAGTGCATG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTATCTAAGCATGGATTaGAGGGACCCTCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLYLSMD*RDPLQD
Trigger: ATCCTGGAGAGGGTCCCTCAAATCCATGCTTAGATA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 90 bp CAAATCCTCTTTCGTCTTATGACTACAAAGGGTTTACAGCTTGTGTaGCCTGTTCTCCACCTCAATTTTCCAAGGATGCTTGAACACGTT +
Preference number: 5 (lower is better)
Translates to: QILFRLMTTKGLQLV*PVLHLNFPRMLEHV
Trigger: AACGTGTTCAAGCATCCTTGGAAAATTGAGGTGGAGAACAGGCCACACAAGCTGTAAACCCTTTGTAGTCATAAGACGAAAGAGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAACTGGTCTTTCCAGTaGCATAGGACATACTCAGAC +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSNWSFQ*HRTYSD
Trigger: GTCTGAGTATGTCCTATGCAACTGGAAAGACCAGTT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTAACTGGTCTTTCCAGTaGCATAGGACATACTCAGAC +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLNWSFQ*HRTYSD
Trigger: GTCTGAGTATGTCCTATGCAACTGGAAAGACCAGTT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTATCTGGACAAAACTTTaGCTGGCCACAACTGGTCTT +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLIWTKL*LATTGL
Trigger: AAGACCAGTTGTGGCCAGCAAAAGTTTTGTCCAGAT...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTCATGCACTTTCCTCTTaGACTGCAGAATGCACAGAC +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSHALSS*TAECTD
Trigger: GTCTGTGCATTCTGCAGTCAAAGAGGAAAGTGCATG...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTATCTAAGCATGGATTaGAGGGACCCTCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSYLSMD*RDPLQD
Trigger: ATCCTGGAGAGGGTCCCTCAAATCCATGCTTAGATA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTATCTAAGCATGGATTaGAGGGACCCTCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKYLSMD*RDPLQD
Trigger: ATCCTGGAGAGGGTCCCTCAAATCCATGCTTAGATA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGCCATCTGGATCCTTTaGTGCCATTTACAATGGCCA +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSAIWIL*CHLQWP
Trigger: TGGCCATTGTAAATGGCACAAAAGGATCCAGATGGC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGGAACTATTCAGCCATaGAAGGATAGACACTCCCAA +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLGTIQP*KDRHSQ
Trigger: TTGGGAGTGTCTATCCTTCAATGGCTGAATAGTTCC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGATATTAACCTATGCTaGAAGCTTCTTGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLDINLC*KLLVSC
Trigger: GCAGCTGACAAGAAGCTTCAAGCATAGGTTAATATC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTTGAGGTGGCTATCTTaGTCACTGCTAATGCAAGTT +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSLRWLS*SLLMQV
Trigger: AACTTGCATTAGCAGTGACAAAGATAGCCACCTCAA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTTGAGGTGGCTATCTTaGTCACTGCTAATGCAAGTT +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLLRWLS*SLLMQV
Trigger: AACTTGCATTAGCAGTGACAAAGATAGCCACCTCAA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGGTTATTACCAAAGGTaGAGGTGGCTATCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLGYYQR*RWLSLS
Trigger: TGACAAAGATAGCCACCTCAACCTTTGGTAATAACC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTATCTGGACAAAACTTTaGCTGGCCACAACTGGTCTT +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSIWTKL*LATTGL
Trigger: AAGACCAGTTGTGGCCAGCAAAAGTTTTGTCCAGAT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTCAACAAAAAGCACACTaGCTTTCCTCTCTTTTCGTC +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSQQKAH*LSSLFV
Trigger: GACGAAAAGAGAGGAAAGCAAGTGTGCTTTTTGTTG...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTGTCCTTTTAGATACTTaGCTTCAGCTGCCTCGTAAT +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSVLLDT*LQLPRN
Trigger: ATTACGAGGCAGCTGAAGCAAAGTATCTAAAAGGAC...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTGTCCTTTTAGATACTTaGCTTCAGCTGCCTCGTAAT +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLVLLDT*LQLPRN
Trigger: ATTACGAGGCAGCTGAAGCAAAGTATCTAAAAGGAC...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGGAACTATTCAGCCATaGAAGGATAGACACTCCCAA +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKGTIQP*KDRHSQ
Trigger: TTGGGAGTGTCTATCCTTCAATGGCTGAATAGTTCC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS TCA 90 bp AGTTCTACCCAAAACAATACTCTTAACAAATCCTCTTTCGTCTTATaGCTACAAAGGGTTTACAGCTTGTGTGGCCTGTTCTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: SSTQNNTLNKSSFVL*LQRVYSLCGLFSTS
Trigger: TGAGGTGGAGAACAGGCCACACAAGCTGTAAACCCTTTGTAGTCATAAGACGAAAGAGGATTTGTTAAGAGTATTGTTTTGGGTAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 90 bp ACAACTGGTCTTTCCAGTTGCATAGGACATACTCAGACTCCATTATaGTTTATATTTGTGTGCCAAGGGTTATTACCAAAGGTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: TTGLSSCIGHTQTPL*FIFVCQGLLPKVEV
Trigger: CACCTCAACCTTTGGTAATAACCCTTGGCACACAAATATAAACCATAATGGAGTCTGAGTATGTCCTATGCAACTGGAAAGACCAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGATATTAACCTATGCTaGAAGCTTCTTGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSDINLC*KLLVSC
Trigger: GCAGCTGACAAGAAGCTTCAAGCATAGGTTAATATC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337685.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGGGTTATTACCAAAGGTaGAGGTGGCTATCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKGYYQR*RWLSLS
Trigger: TGACAAAGATAGCCACCTCAACCTTTGGTAATAACC...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGGTTATTACCAAAGGTaGAGGTGGCTATCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSGYYQR*RWLSLS
Trigger: TGACAAAGATAGCCACCTCAACCTTTGGTAATAACC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCAACAAAAAGCACACTaGCTTTCCTCTCTTTTCGTC +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKQQKAH*LSSLFV
Trigger: GACGAAAAGAGAGGAAAGCAAGTGTGCTTTTTGTTG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTGTCCTTTTAGATACTTaGCTTCAGCTGCCTCGTAAT +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSVLLDT*LQLPRN
Trigger: ATTACGAGGCAGCTGAAGCAAAGTATCTAAAAGGAC...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGTGAGCTTCATTTGTaGGTGCTTTTCGTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSSELHL*VLFVSF
Trigger: AAAAGAGACGAAAAGCACCAACAAATGAAGCTCACT...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTTTTAGTGAGCTTCATTaGTTGGTGCTTTTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLFSELH*LVLFVS
Trigger: AGAGACGAAAAGCACCAACAAATGAAGCTCACTAAA...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTTTTCCTCTTACTGTTaGATGAAGTTTCAGATCTGG +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSFSSYC*MKFQIW
Trigger: CCAGATCTGAAACTTCATCAAACAGTAAGAGGAAAA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTCTTCTTTCAAAGCTTaGGGCATAATGAGCATATCT +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSSSFKA*GIMSIS
Trigger: AGATATGCTCATTATGCCCAAAGCTTTGAAAGAAGA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTTTTCAGAATTCATGTTaGCCTCAACAAAAAGCACAC +
Preference number: 5 (lower is better)
Translates to: SQPGFICLEWPGCKYNKSFQNSC*PQQKAH
Trigger: GTGTGCTTTTTGTTGAGGCAAACATGAATTCTGAAA...AGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCCAGGCTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTAGTGAGCTTCATTTGTaGGTGCTTTTCGTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSSELHL*VLFVSF
Trigger: AAAAGAGACGAAAAGCACCAACAAATGAAGCTCACT...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTTTAGTGAGCTTCATTaGTTGGTGCTTTTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKFSELH*LVLFVS
Trigger: AGAGACGAAAAGCACCAACAAATGAAGCTCACTAAA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTTTAGTGAGCTTCATTaGTTGGTGCTTTTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSFSELH*LVLFVS
Trigger: AGAGACGAAAAGCACCAACAAATGAAGCTCACTAAA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGAAGATAGCCAGGAGCTaGTCTGATTTAAGGAACTAT +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKKIARS*SDLRNY
Trigger: ATAGTTCCTTAAATCAGACAAGCTCCTGGCTATCTT...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp GGATTCATATGTCTAGAGTGGCCAGGCTGTAAATACAATAAGTCTAGCTGCCTTCTCAGAACAAAGTGCTaGCCTTTTCTACAGTTTATA +
Preference number: 5 (lower is better)
Translates to: GFICLEWPGCKYNKSSCLLRTKC*PFLQFI
Trigger: TATAAACTGTAGAAAAGGCAAGCACTTTGTTCTGAG...AAGGCAGCTAGACTTATTGTATTTACAGCCTGGCCACTCTAGACATATGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTTTTCCTCTTACTGTTaGATGAAGTTTCAGATCTGG +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSFSSYC*MKFQIW
Trigger: CCAGATCTGAAACTTCATCAAACAGTAAGAGGAAAA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTTTTTGTGGTACATTTaGAGACAGCATAGTGATCTC +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKFLWYI*RQHSDL
Trigger: GAGATCACTATGCTGTCTCAAAATGTACCACAAAAA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTTTTTGTGGTACATTTaGAGACAGCATAGTGATCTC +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSFLWYI*RQHSDL
Trigger: GAGATCACTATGCTGTCTCAAAATGTACCACAAAAA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTCTTCTTTCAAAGCTTaGGGCATAATGAGCATATCT +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKSSFKA*GIMSIS
Trigger: AGATATGCTCATTATGCCCAAAGCTTTGAAAGAAGA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp AGTTTATATCAAACGAGATGGGCACTTAAGCAGTCAGCCTGGATTCATATGTCTTTTCAGAATTCATGTTaGCCTCAACAAAAAGCACAC +
Preference number: 5 (lower is better)
Translates to: SLYQTRWALKQSAWIHMSFQNSC*PQQKAH
Trigger: GTGTGCTTTTTGTTGAGGCAAACATGAATTCTGAAA...AGACATATGAATCCAGGCTGACTGCTTAAGTGCCCATCTCGTTTGATATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGTTTCAGAATTCATGTTaGCCTCAACAAAAAGCACAC +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKFQNSC*PQQKAH
Trigger: GTGTGCTTTTTGTTGAGGCAAACATGAATTCTGAAA...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS-3UTR CAA 90 bp CACATGTGGTCAGACAGCTATATTAAGAAGATCTACTCACTGCTGGTTATGAAGCTCAGAACAAAGTGCTaGCCTTTTCTACAGTTTATA +
Preference number: 5 (lower is better)
Translates to: HMWSDSYIKKIYSLLVMKLRTKC*PFLQFI
Trigger: TATAAACTGTAGAAAAGGCAAGCACTTTGTTCTGAG...CTTCATAACCAGCAGTGAGTAGATCTTCTTAATATAGCTGTCTGACCACATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS TCA 90 bp AGACTATCATTCCTGTTTCAAACGGATGTGTCTCATAATGTAAAATaGAGCGTGGAAGTTCTTCGTCTTCCTCATCATCATCTAATAGAG +
Preference number: 5 (lower is better)
Translates to: RLSFLFQTDVSHNVK*SVEVLRLPHHHLIE
Trigger: CTCTATTAGATGATGATGAGGAAGACGAAGAACTTCCACGCTTCATTTTACATTATGAGACACATCCGTTTGAAACAGGAATGATAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 90 bp TATGGTTTATATTTGTGTGCCAAGGGTTATTACCAAAGGTTGAGGTaGCTATCTTTGTCACTGCTAATGCAAGTTCTACCCAAAACAATA +
Preference number: 5 (lower is better)
Translates to: YGLYLCAKGYYQRLR*LSLSLLMQVLPKTI
Trigger: TATTGTTTTGGGTAGAACTTGCATTAGCAGTGACAAAGATAGCCACCTCAACCTTTGGTAATAACCCTTGGCACACAAATATAAACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 72 bp CTGCAGCCTCTTGAAATGCTGCCCCTCCCCCAATACTaGCCGGGTACAGCTCCCTTCCGAGCGGCTCCGACG +
Preference number: 6 (lower is better)
Translates to: LQPLEMLPLPQY*PGTAPFRAAPT
Trigger: CGTCGGAGCCGCTCGGAAGGGAGCTGTACCCGGCCAGTATTGGGGGAGGGGCAGCATTTCAAGAGGCTGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337685.6
CDS CAA 90 bp GTTGGCTCGGTCCCGAGCAGCCTTCATCCGGTCAGGGAGAATTTTTaGGAAGGACATTTTCTTGGTCTGGGAAGTTACAGCCATCGGTTC +
Preference number: 6 (lower is better)
Translates to: VGSVPSSLHPVRENF*EGHFLGLGSYSHRF
Trigger: GAACCGATGGCTGTAACTTCCCAGACCAAGAAAATGTCCTTCCAAAAAATTCTCCCTGACCGGATGAAGGCTGCTCGGGACCGAGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 72 bp CCCCCATCTCTGATTCCATGGAAGGTTGATTCTGGCTaGTATCTAAGCATGGATTTGAGGGACCCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: PPSLIPWKVDSG*YLSMDLRDPLQ
Trigger: CTGGAGAGGGTCCCTCAAATCCATGCTTAGATACCAGCCAGAATCAACCTTCCATGGAATCAGAGATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 90 bp GCCAGGGTCTCTAGGCAGGTATCCTCGCTCTCTTCTTTCAAAGCTTaGGGCATAATGAGCATATCTGATGACAAAGGTGACAAAGGTGGA +
Preference number: 6 (lower is better)
Translates to: ARVSRQVSSLSSFKA*GIMSISDDKGDKGG
Trigger: TCCACCTTTGTCACCTTTGTCATCAGATATGCTCATTATGCCCAAAGCTTTGAAAGAAGAGAGCGAGGATACCTGCCTAGAGACCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 90 bp CTGATTCCATGGAAGGTTGATTCTGGCTGGTATCTAAGCATGGATTaGAGGGACCCTCTCCAGGATCCTCAATATTCTCTGAGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: LIPWKVDSGWYLSMD*RDPLQDPQYSLRKQ
Trigger: CTGCTTTCTCAGAGAATATTGAGGATCCTGGAGAGGGTCCCTCAAATCCATGCTTAGATACCAGCCAGAATCAACCTTCCATGGAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 72 bp TGGAAGGTTGATTCTGGCTGGTATCTAAGCATGGATTaGAGGGACCCTCTCCAGGATCCTCAATATTCTCTG +
Preference number: 6 (lower is better)
Translates to: WKVDSGWYLSMD*RDPLQDPQYSL
Trigger: CAGAGAATATTGAGGATCCTGGAGAGGGTCCCTCAAATCCATGCTTAGATACCAGCCAGAATCAACCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 72 bp TCTAGGCAGGTATCCTCGCTCTCTTCTTTCAAAGCTTaGGGCATAATGAGCATATCTGATGACAAAGGTGAC +
Preference number: 6 (lower is better)
Translates to: SRQVSSLSSFKA*GIMSISDDKGD
Trigger: GTCACCTTTGTCATCAGATATGCTCATTATGCCCAAAGCTTTGAAAGAAGAGAGCGAGGATACCTGCCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 72 bp TTTCCCTGTAGCCTAGACATGGTCCTTTTAGATACTTaGCTTCAGCTGCCTCGTAATCTAACCCATCAACAG +
Preference number: 6 (lower is better)
Translates to: FPCSLDMVLLDT*LQLPRNLTHQQ
Trigger: CTGTTGATGGGTTAGATTACGAGGCAGCTGAAGCAAAGTATCTAAAAGGACCATGTCTAGGCTACAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 72 bp TTTCGTCTTATGACTACAAAGGGTTTACAGCTTGTGTaGCCTGTTCTCCACCTCAATTTTCCAAGGATGCTT +
Preference number: 6 (lower is better)
Translates to: FRLMTTKGLQLV*PVLHLNFPRML
Trigger: AAGCATCCTTGGAAAATTGAGGTGGAGAACAGGCCACACAAGCTGTAAACCCTTTGTAGTCATAAGACGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 72 bp TATTTGTGTGCCAAGGGTTATTACCAAAGGTTGAGGTaGCTATCTTTGTCACTGCTAATGCAAGTTCTACCC +
Preference number: 6 (lower is better)
Translates to: YLCAKGYYQRLR*LSLSLLMQVLP
Trigger: GGGTAGAACTTGCATTAGCAGTGACAAAGATAGCCACCTCAACCTTTGGTAATAACCCTTGGCACACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 72 bp ATTTCAGCCATCTGGATCCTTTTGTGCCATTTACAATaGCCAGAAGATGGTTCTCTGTTCCCTTTGCATTCA +
Preference number: 6 (lower is better)
Translates to: ISAIWILLCHLQ*PEDGSLFPLHS
Trigger: TGAATGCAAAGGGAACAGAGAACCATCTTCTGGCCATTGTAAATGGCACAAAAGGATCCAGATGGCTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 72 bp GCCAAGGGTTATTACCAAAGGTTGAGGTGGCTATCTTaGTCACTGCTAATGCAAGTTCTACCCAAAACAATA +
Preference number: 6 (lower is better)
Translates to: AKGYYQRLRWLS*SLLMQVLPKTI
Trigger: TATTGTTTTGGGTAGAACTTGCATTAGCAGTGACAAAGATAGCCACCTCAACCTTTGGTAATAACCCTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 72 bp TACTGTTTGATGAAGTTTCAGATCTGGACAAAACTTTaGCTGGCCACAACTGGTCTTTCCAGTTGCATAGGA +
Preference number: 6 (lower is better)
Translates to: YCLMKFQIWTKL*LATTGLSSCIG
Trigger: TCCTATGCAACTGGAAAGACCAGTTGTGGCCAGCAAAAGTTTTGTCCAGATCTGAAACTTCATCAAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 90 bp TTTTCCTCTTACTGTTTGATGAAGTTTCAGATCTGGACAAAACTTTaGCTGGCCACAACTGGTCTTTCCAGTTGCATAGGACATACTCAG +
Preference number: 6 (lower is better)
Translates to: FSSYCLMKFQIWTKL*LATTGLSSCIGHTQ
Trigger: CTGAGTATGTCCTATGCAACTGGAAAGACCAGTTGTGGCCAGCAAAAGTTTTGTCCAGATCTGAAACTTCATCAAACAGTAAGAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 90 bp ATAATTCTCTTTCCCTGTAGCCTAGACATGGTCCTTTTAGATACTTaGCTTCAGCTGCCTCGTAATCTAACCCATCAACAGCAGAAATTG +
Preference number: 6 (lower is better)
Translates to: IILFPCSLDMVLLDT*LQLPRNLTHQQQKL
Trigger: CAATTTCTGCTGTTGATGGGTTAGATTACGAGGCAGCTGAAGCAAAGTATCTAAAAGGACCATGTCTAGGCTACAGGGAAAGAGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 90 bp CTCCATTATGGTTTATATTTGTGTGCCAAGGGTTATTACCAAAGGTaGAGGTGGCTATCTTTGTCACTGCTAATGCAAGTTCTACCCAAA +
Preference number: 6 (lower is better)
Translates to: LHYGLYLCAKGYYQR*RWLSLSLLMQVLPK
Trigger: TTTGGGTAGAACTTGCATTAGCAGTGACAAAGATAGCCACCTCAACCTTTGGTAATAACCCTTGGCACACAAATATAAACCATAATGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 90 bp TATTTGTGTGCCAAGGGTTATTACCAAAGGTTGAGGTGGCTATCTTaGTCACTGCTAATGCAAGTTCTACCCAAAACAATACTCTTAACA +
Preference number: 6 (lower is better)
Translates to: YLCAKGYYQRLRWLS*SLLMQVLPKTILLT
Trigger: TGTTAAGAGTATTGTTTTGGGTAGAACTTGCATTAGCAGTGACAAAGATAGCCACCTCAACCTTTGGTAATAACCCTTGGCACACAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS TCA 72 bp TTCCTGTTTCAAACGGATGTGTCTCATAATGTAAAATaGAGCGTGGAAGTTCTTCGTCTTCCTCATCATCAT +
Preference number: 6 (lower is better)
Translates to: FLFQTDVSHNVK*SVEVLRLPHHH
Trigger: ATGATGATGAGGAAGACGAAGAACTTCCACGCTTCATTTTACATTATGAGACACATCCGTTTGAAACAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CCA 72 bp CTTTCCAGTTGCATAGGACATACTCAGACTCCATTATaGTTTATATTTGTGTGCCAAGGGTTATTACCAAAG +
Preference number: 6 (lower is better)
Translates to: LSSCIGHTQTPL*FIFVCQGLLPK
Trigger: CTTTGGTAATAACCCTTGGCACACAAATATAAACCATAATGGAGTCTGAGTATGTCCTATGCAACTGGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS CAA 90 bp AAAGGTGGAGCAAACTTTTCATCTTTAACACATGCACTTTCCTCTTaGACTGCAGAATGCACAGACATAACTGCTGAGATATCAATCTTA +
Preference number: 6 (lower is better)
Translates to: KGGANFSSLTHALSS*TAECTDITAEISIL
Trigger: TAAGATTGATATCTCAGCAGTTATGTCTGTGCATTCTGCAGTCAAAGAGGAAAGTGCATGTGTTAAAGATGAAAAGTTTGCTCCACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS TCA 72 bp TACATTTTGAGACAGCATAGTGATCTCCTCTTCATCTaGAGTGCTTGCTTGACTCAAATTTGTTCTCTCATT +
Preference number: 6 (lower is better)
Translates to: YILRQHSDLLFI*SACLTQICSLI
Trigger: AATGAGAGAACAAATTTGAGTCAAGCAAGCACTTCAGATGAAGAGGAGATCACTATGCTGTCTCAAAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1
CDS GCA 72 bp TCTTTAACACATGCACTTTCCTCTTTGACTGCAGAATaGACAGACATAACTGCTGAGATATCAATCTTATTC +
Preference number: 6 (lower is better)
Translates to: SLTHALSSLTAE*TDITAEISILF
Trigger: GAATAAGATTGATATCTCAGCAGTTATGTCTGTGCATTCTGCAGTCAAAGAGGAAAGTGCATGTGTTAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337685.6
ENST00000357175.6
ENST00000372552.1