Pregenerated sensors for PWRN4 (Homo sapiens)
Ensembl gene IDs: ENSG00000260232Ensembl transcript IDs: ENST00000563016.1, ENST00000652183.1, ENST00000657402.1, ENST00000661343.1, ENST00000663429.1, ENST00000663707.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTGCTGGAGTAGAAAGTTCCTCCGGCTTGGCAGGCTTTCCGAGTTaGGAAGATGGAACTGAGAGCATAGAAGAGCGAGGTGGCCTGACT | + |
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Preference number: 5 (lower is better) Translates to: AAGVESSSGLAGFPS*EDGTESIEERGGLT Trigger: AGTCAGGCCACCTCGCTCTTCTATGCTCTCAGTTCCATCTTCTCAACTCGGAAAGCCTGCCAAGCCGGAGGAACTTTCTACTCCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657402.1 |
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| CDS GCA 90 bp | AGGACAAATAGGCTTATGATTCTGCAGGCTGTGCAAGAAACACGGTaGCGGCATCTGCATCTTTTGAGGGCCTCAGGCTGCTTCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: RTNRLMILQAVQETR*RHLHLLRASGCFHS Trigger: TGAGTGGAAGCAGCCTGAGGCCCTCAAAAGATGCAGATGCCGGCACCGTGTTTCTTGCACAGCCTGCAGAATCATAAGCCTATTTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652183.1 |
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| CDS CCA 90 bp | GCTCTGAACTCAGCTGTACCTTCTGTGTTCCCATGCTTAATGGGATaGTCTGGAGGAGGTGACCACAGTCACTGGGCAGTCTGTACTTGT | + |
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Preference number: 5 (lower is better) Translates to: ALNSAVPSVFPCLMG*SGGGDHSHWAVCTC Trigger: ACAAGTACAGACTGCCCAGTGACTGTGGTCACCTCCTCCAGACCATCCCATTAAGCATGGGAACACAGAAGGTACAGCTGAGTTCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657402.1 ENST00000663429.1 |
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| CDS TCA 90 bp | TGTACCTTCTGTGTTCCCATGCTTAATGGGATGGTCTGGAGGAGGTaGCCACAGTCACTGGGCAGTCTGTACTTGTGCAAAAGCCATGCA | + |
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Preference number: 5 (lower is better) Translates to: CTFCVPMLNGMVWRR*PQSLGSLYLCKSHA Trigger: TGCATGGCTTTTGCACAAGTACAGACTGCCCAGTGACTGTGGTCACCTCCTCCAGACCATCCCATTAAGCATGGGAACACAGAAGGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657402.1 ENST00000663429.1 |
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| CDS CCA 90 bp | AGTCAGAGACAGCAACAACGTGGCAGGTCTGTGCATTCAGAAAGGTaGTCTCGGAGTTCATTCATACAAGTTAAAGCCTTTGTGAACATC | + |
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Preference number: 5 (lower is better) Translates to: SQRQQQRGRSVHSER*SRSSFIQVKAFVNI Trigger: GATGTTCACAAAGGCTTTAACTTGTATGAATGAACTCCGAGACCACCTTTCTGAATGCACAGACCTGCCACGTTGTTGCTGTCTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663429.1 |
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| CDS TCA 90 bp | GACTTTAAATTCCCTGGATACAGTACCGACCTCAGAGCCCCTGACTaGAGTCTTACCTGGCAAAACAAACACCAAGTTATAATAATATTT | + |
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Preference number: 5 (lower is better) Translates to: DFKFPGYSTDLRAPD*SLTWQNKHQVIIIF Trigger: AAATATTATTATAACTTGGTGTTTGTTTTGCCAGGTAAGACTTCAGTCAGGGGCTCTGAGGTCGGTACTGTATCCAGGGAATTTAAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663429.1 |
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| CDS GCA 90 bp | GCCCAGGTTGAGAAGACTTCACTGGTGAATTACTCCAAACCAAGATaGTTATACTTTCCAAATGTATATGCAGATTCAATACAATCCCTA | + |
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Preference number: 5 (lower is better) Translates to: AQVEKTSLVNYSKPR*LYFPNVYADSIQSL Trigger: TAGGGATTGTATTGAATCTGCATATACATTTGGAAAGTATAAGCATCTTGGTTTGGAGTAATTCACCAGTGAAGTCTTCTCAACCTGGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661343.1 |
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| CDS GCA 72 bp | CAAGCTCACGTGATTGTTCCTAGGATTTGCTTCTCCTaGTGTCTGCCTGCCGCCCTCACTCTGCCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QAHVIVPRICFS*CLPAALTLPAS Trigger: GGAGGCAGGCAGAGTGAGGGCGGCAGGCAGACAGCAGGAGAAGCAAATCCTAGGAACAATCACGTGAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663707.1 |
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| CDS CAA 90 bp | ATTCTGCAGGCTGTGCAAGAAACACGGTGCCGGCATCTGCATCTTTaGAGGGCCTCAGGCTGCTTCCACTCAATAGCAGAAGGTAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: ILQAVQETRCRHLHL*RASGCFHSIAEGKG Trigger: CCCTTTACCTTCTGCTATTGAGTGGAAGCAGCCTGAGGCCCTCAAAAGATGCAGATGCCGGCACCGTGTTTCTTGCACAGCCTGCAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652183.1 |
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| CDS GCA 72 bp | GAGGCTCTGAACTCAGCTGTACCTTCTGTGTTCCCATaGTTAATGGGATGGTCTGGAGGAGGTGACCACAGT | + |
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Preference number: 6 (lower is better) Translates to: EALNSAVPSVFP*LMGWSGGGDHS Trigger: ACTGTGGTCACCTCCTCCAGACCATCCCATTAAGCATGGGAACACAGAAGGTACAGCTGAGTTCAGAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657402.1 ENST00000663429.1 |
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| CDS TCA 72 bp | GTAGAAAGTTCCTCCGGCTTGGCAGGCTTTCCGAGTTaGGAAGATGGAACTGAGAGCATAGAAGAGCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: VESSSGLAGFPS*EDGTESIEERG Trigger: ACCTCGCTCTTCTATGCTCTCAGTTCCATCTTCTCAACTCGGAAAGCCTGCCAAGCCGGAGGAACTTTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657402.1 |
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| CDS TCA 72 bp | TGTGTTCCCATGCTTAATGGGATGGTCTGGAGGAGGTaGCCACAGTCACTGGGCAGTCTGTACTTGTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: CVPMLNGMVWRR*PQSLGSLYLCK Trigger: TTTGCACAAGTACAGACTGCCCAGTGACTGTGGTCACCTCCTCCAGACCATCCCATTAAGCATGGGAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657402.1 ENST00000663429.1 |
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| CDS TCA 72 bp | TCCAGCACTTTTGGAAGCCAAGACAGGTCCATCACTTaGGGTCAGGAGTTTAAGACCAGCCTTCACACCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSTFGSQDRSIT*GQEFKTSLHTC Trigger: ACAGGTGTGAAGGCTGGTCTTAAACTCCTGACCTCAAGTGATGGACCTGTCTTGGCTTCCAAAAGTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652183.1 ENST00000661343.1 |
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| CDS TCA 72 bp | AGATTAGTGAGATGGGTAGACAGATTCACATGGTGCTaGATAAGATCGTGTGGGACTGAGGACGCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RLVRWVDRFTWC*IRSCGTEDAAG Trigger: TCCTGCAGCGTCCTCAGTCCCACACGATCTTATTCAGCACCATGTGAATCTGTCTACCCATCTCACTAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652183.1 ENST00000661343.1 ENST00000663707.1 |
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| CDS TCA 72 bp | TGTGATGTTGTAAGGACCTTGGCAGGCTTTCCGAGTTaGGAAGATGGAACTGAGAGCATAGAAGAGCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: CDVVRTLAGFPS*EDGTESIEERG Trigger: ACCTCGCTCTTCTATGCTCTCAGTTCCATCTTCTCAACTCGGAAAGCCTGCCAAGGTCCTTACAACATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663429.1 |
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| CDS GCA 72 bp | AATCCAGGAGGCAGAGTTTGCGGTAAGCTGAAATCATaGCACTGTACTCCAGCAGTTTCTCTGGGTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: NPGGRVCGKLKS*HCTPAVSLGQK Trigger: TTTCTGACCCAGAGAAACTGCTGGAGTACAGTGGCATGATTTCAGCTTACCGCAAACTCTGCCTCCTGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652183.1 ENST00000661343.1 |
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| CDS GCA 72 bp | AAGAGAGTCAGAGACAGCAACAACGTGGCAGGTCTGTaGATTCAGAAAGGTGGTCTCGGAGTTCATTCATAC | + |
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Preference number: 6 (lower is better) Translates to: KRVRDSNNVAGL*IQKGGLGVHSY Trigger: GTATGAATGAACTCCGAGACCACCTTTCTGAATGCACAGACCTGCCACGTTGTTGCTGTCTCTGACTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663429.1 |
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| CDS CCA 72 bp | AAGTACATTAGAAGAGAGTCAGAGACAGCAACAACGTaGCAGGTCTGTGCATTCAGAAAGGTGGTCTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: KYIRRESETATT*QVCAFRKVVSE Trigger: CTCCGAGACCACCTTTCTGAATGCACAGACCTGCCACGTTGTTGCTGTCTCTGACTCTCTTCTAATGTACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663429.1 |
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| CDS CAA 72 bp | TGGGAGTGTCCAGAAGACACACCTTTCTGCAATACTTaGAGAAACAGATTTGTGAGGGGAGCCCAGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: WECPEDTPFCNT*RNRFVRGAQHP Trigger: AGGATGCTGGGCTCCCCTCACAAATCTGTTTCTCAAAGTATTGCAGAAAGGTGTGTCTTCTGGACACTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563016.1 |
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| CDS TCA 72 bp | GTGAGTGAAGCCTACTATTGCCCAAGTTTACTGCTTTaGGAGTTTCCCAGCTGTGATGTTGTAAGGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: VSEAYYCPSLLL*EFPSCDVVRTL Trigger: CAAGGTCCTTACAACATCACAGCTGGGAAACTCTCAAAGCAGTAAACTTGGGCAATAGTAGGCTTCACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663429.1 |
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| CDS TCA 72 bp | GAAAGTTCCTCCGGCTGGAAATACACAACAATGATGTaGGTGAAGCCTACTATTGCCCAAGTTTACTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ESSSGWKYTTMM*VKPTIAQVYCF Trigger: AAAGCAGTAAACTTGGGCAATAGTAGGCTTCACTCACATCATTGTTGTGTATTTCCAGCCGGAGGAACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663429.1 |
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| CDS CAA 72 bp | TCAGTAAGAAGAATGACTGCTGAACTAACTCGATCTTaGTACAAAACAGCTGAATTCCCGCATGGTCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SVRRMTAELTRS*YKTAEFPHGPQ Trigger: TTGGGGACCATGCGGGAATTCAGCTGTTTTGTACAAAGATCGAGTTAGTTCAGCAGTCATTCTTCTTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657402.1 ENST00000663429.1 |
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| CDS GCA 72 bp | TCATGGGGTTGTGTGTTTCTTATTCTGAAACCACTATaGCTGCATTTTCAGGTGGTTAAATATTACAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SWGCVFLILKPL*LHFQVVKYYSG Trigger: ACCACTGTAATATTTAACCACCTGAAAATGCAGGCATAGTGGTTTCAGAATAAGAAACACACAACCCCATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000652183.1 ENST00000661343.1 ENST00000663707.1 |
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| CDS CAA 72 bp | CCAAGAAGAAATTATTACAAGCAAGGTTTGTGGGCATaGTATCATTGTTCAGTAAGAAGAATGACTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PRRNYYKQGLWA*YHCSVRRMTAE Trigger: TTCAGCAGTCATTCTTCTTACTGAACAATGATACAATGCCCACAAACCTTGCTTGTAATAATTTCTTCTTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657402.1 ENST00000663429.1 |
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