Pregenerated sensors for PVRIG (Homo sapiens)

Ensembl gene IDs: ENSG00000213413

Ensembl transcript IDs: ENST00000317271.2, ENST00000471803.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GCCCCATACTGGGCTCTGCCCCAGGCGCTGTCTCCTCGTCATAGGTaGTGGCAACTGGCTTCTGGCTGCTCGGGCCCAAAGCACAGCCAC	+
Preference number: 5 (lower is better) Translates to: APYWALPQALSPRHR*WQLASGCSGPKHSH Trigger: GTGGCTGTGCTTTGGGCCCGAGCAGCCAGAAGCCAGTTGCCATCACCTATGACGAGGAGACAGCGCCTGGGGCAGAGCCCAGTATGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317271.2
CDS GCA 72 bp	GCCCAGCAGTGCCATGTGGGAGGCAAGCCACCCAGCTaGCAAGGCAAGAGACCGAGGGCACAAGCTGTTCCA	+
Preference number: 6 (lower is better) Translates to: AQQCHVGGKPPS*QGKRPRAQAVP Trigger: TGGAACAGCTTGTGCCCTCGGTCTCTTGCCTTGGCAGCTGGGTGGCTTGCCTCCCACATGGCACTGCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471803.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu