RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PVR (Homo sapiens)

Ensembl gene IDs: ENSG00000073008

Ensembl transcript IDs: ENST00000187830.2, ENST00000344956.8, ENST00000403059.8, ENST00000406449.8, ENST00000425690.8, ENST00000587785.1

Found 890 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACCTGGCTCGTATTGGGCATCCCGCCCAGGTCTGAGTGCCAGGTaGTTTGGGCTGGCGGGCGACCCCCTGTGGAGACGCAGCGGGCCA +
Preference number: 1 (lower is better)
Translates to: APGSYWASRPGLSAR*FGLAGDPLWRRSGP
Trigger: TGGCCCGCTGCGTCTCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp TGGCTCGTATTGGGCATCCCGCCCAGGTCTGAGTGCCAGGTGATTTaGGCTGGCGGGCGACCCCCTGTGGAGACGCAGCGGGCCATGGGC +
Preference number: 1 (lower is better)
Translates to: WLVLGIPPRSECQVI*AGGRPPVETQRAMG
Trigger: GCCCATGGCCCGCTGCGTCTCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGGGATGCCCAATACGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 90 bp CAGGAACCCTGGCACCTGGCTCGTATTGGGCATCCCGCCCAGGTCTaGGTGCCAGGTGATTTGGGCTGGCGGGCGACCCCCTGTGGAGAC +
Preference number: 1 (lower is better)
Translates to: QEPWHLARIGHPAQV*VPGDLGWRATPCGD
Trigger: GTCTCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 90 bp AACCCTGGCACCTGGCTCGTATTGGGCATCCCGCCCAGGTCTGAGTaGCAGGTGATTTGGGCTGGCGGGCGACCCCCTGTGGAGACGCAG +
Preference number: 1 (lower is better)
Translates to: NPGTWLVLGIPPRSE*QVIWAGGRPPVETQ
Trigger: CTGCGTCTCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCCAGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp GGCTGGCGGGCGACCCCCTGTGGAGACGCAGCGGGCCATGGGCACTaGCTCTCCAGTGAGCTGGACCTTCTGAACCTCAGCTGTGTTCTG +
Preference number: 1 (lower is better)
Translates to: GWRATPCGDAAGHGH*LSSELDLLNLSCVL
Trigger: CAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGCCCATGGCCCGCTGCGTCTCCACAGGGGGTCGCCCGCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp TCCGCAGCTCCGCGCCCAGTCTGGCTGCCACGAATTCCAGCCGTTTaGACTCCGAATAGCTGGGGCCCTGCGTTTGGTGGAAGACGGCCA +
Preference number: 1 (lower is better)
Translates to: SAAPRPVWLPRIPAV*TPNSWGPAFGGRRP
Trigger: TGGCCGTCTTCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 90 bp ACGCAGCGGGCCATGGGCACTGGCTCTCCAGTGAGCTGGACCTTCTaGACCTCAGCTGTGTTCTGGGGCTTGGCAAGCACTCGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: TQRAMGTGSPVSWTF*TSAVFWGLASTRSQ
Trigger: CTGGCTCCGAGTGCTTGCCAAGCCCCAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGCCCATGGCCCGCTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 90 bp GACCCCCTGTGGAGACGCAGCGGGCCATGGGCACTGGCTCTCCAGTaGGCTGGACCTTCTGAACCTCAGCTGTGTTCTGGGGCTTGGCAA +
Preference number: 1 (lower is better)
Translates to: DPLWRRSGPWALALQ*AGPSEPQLCSGAWQ
Trigger: TTGCCAAGCCCCAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGCCCATGGCCCGCTGCGTCTCCACAGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 90 bp GAACATCCTCAGCGAGGCATTCCGCAGCTCCGCGCCCAGTCTGGCTaGCACGAATTCCAGCCGTTTGGACTCCGAATAGCTGGGGCCCTG +
Preference number: 1 (lower is better)
Translates to: EHPQRGIPQLRAQSG*HEFQPFGLRIAGAL
Trigger: CAGGGCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGAATGCCTCGCTGAGGATGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp ACCCGAACATCCTCAGCGAGGCATTCCGCAGCTCCGCGCCCAGTCTaGCTGCCACGAATTCCAGCCGTTTGGACTCCGAATAGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: TRTSSARHSAAPRPV*LPRIPAVWTPNSWG
Trigger: GCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGAATGCCTCGCTGAGGATGTTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp GCACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTaGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCTCCA +
Preference number: 1 (lower is better)
Translates to: AQGGRLVSLEGVFIH*GRVQLWRPTSLPAP
Trigger: TGGAGCTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 90 bp TCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACC +
Preference number: 1 (lower is better)
Translates to: SSSIGVGSNSGGPRP*QLQSLSPLSPDAVT
Trigger: GGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp TGGCAGGGGACCCATGGTCGTGCTCCAATTATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCAGGTCAGGGTGGCCTCATTCTGGCC +
Preference number: 1 (lower is better)
Translates to: WQGTHGRAPIIACGL*VAASIAGQGGLILA
Trigger: GGCCAGAATGAGGCCACCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTATAATTGGAGCACGACCATGGGTCCCCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp GTGTTGATTGGTTTGTCCACAGGACGGATCAGGAGCTGGGCGCCCTaGGCCACAGCAAAGGGTGGCAGGGGACCCATGGTCGTGCTCCAA +
Preference number: 1 (lower is better)
Translates to: VLIGLSTGRIRSWAP*ATAKGGRGPMVVLQ
Trigger: TTGGAGCACGACCATGGGTCCCCTGCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCCTGTGGACAAACCAATCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 90 bp CAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTaGCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCTGCTCA +
Preference number: 1 (lower is better)
Translates to: QLQSLSPLSPDAVTL*PLSVDPGKSCSLCS
Trigger: TGAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
3UTR CCA 90 bp ACGTGCCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTaGGGTCCCACTGGCCTCCTCACCCTTGAGCCCTTTGCCCCTGCC +
Preference number: 1 (lower is better)
Translates to: TCHQSNQCSFISPTL*GPTGLLTLEPFAPA
Trigger: GGCAGGGGCAAAGGGCTCAAGGGTGAGGAGGCCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGGCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 90 bp ATTAAAGTTGTGTTGATTGGTTTGTCCACAGGACGGATCAGGAGCTaGGCGCCCTGGGCCACAGCAAAGGGTGGCAGGGGACCCATGGTC +
Preference number: 1 (lower is better)
Translates to: IKVVLIGLSTGRIRS*APWATAKGGRGPMV
Trigger: GACCATGGGTCCCCTGCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCCTGTGGACAAACCAATCAACACAACTTTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp GCTCCACTGGGAGAGGGCAGATGGAAGCCGTCGCCTCATCTGTCGTaGAACGTGTGCTGTGCACCTCCTCCCTTTGCTGATCTTAATCTC +
Preference number: 1 (lower is better)
Translates to: APLGEGRWKPSPHLS*NVCCAPPPFADLNL
Trigger: GAGATTAAGATCAGCAAAGGGAGGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCCTCTCCCAGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR TCA 90 bp CAGGATTCCCAGAACCAGGAAGATGATGGCGTTACGGGACATGCCTaGGTGCTCACTGGGAGGTCCCTCTTTGACCTGGACGGTCAGTTC +
Preference number: 1 (lower is better)
Translates to: QDSQNQEDDGVTGHA*VLTGRSLFDLDGQF
Trigger: GAACTGACCGTCCAGGTCAAAGAGGGACCTCCCAGTGAGCACTCAGGCATGTCCCGTAACGCCATCATCTTCCTGGTTCTGGGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 90 bp CTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGGTaGGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCC +
Preference number: 1 (lower is better)
Translates to: LHPHQSNGGNLMAVG*GFSERHTGRTQHRA
Trigger: GGCTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
3UTR TCA 90 bp GGCTTCTGGGACCTCACAGCTCCTCAAGGTGAGATCGTATCAACCTaGAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: GFWDLTAPQGEIVST*KDSRLPCRSNAEGG
Trigger: CCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAGGTTGATACGATCTCACCTTGAGGAGCTGTGAGGTCCCAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR TCA 90 bp TCCCCAGCAGGATCAGAAAAACCAGGATTCCCAGAACCAGGAAGATaGTGGCGTTACGGGACATGCCTGAGTGCTCACTGGGAGGTCCCT +
Preference number: 1 (lower is better)
Translates to: SPAGSEKPGFPEPGR*WRYGTCLSAHWEVP
Trigger: AGGGACCTCCCAGTGAGCACTCAGGCATGTCCCGTAACGCCATCATCTTCCTGGTTCTGGGAATCCTGGTTTTTCTGATCCTGCTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 90 bp TCACAGTCAGCAGCTGAGGCTTCTCAAAGCTCTCGTGCTCCACCTTaGAGGTCACATTCTTGCCGTCCACCTGGCTTGAGGGCACCAATA +
Preference number: 1 (lower is better)
Translates to: SQSAAEASQSSRAPP*RSHSCRPPGLRAPI
Trigger: TATTGGTGCCCTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGAGCTTTGAGAAGCCTCAGCTGCTGACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 90 bp GTCCCAGCTTGCTGGCTGCAGATGCTGGCAGAAAGTGGCTGCAGATaGTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCAC +
Preference number: 1 (lower is better)
Translates to: VPACWLQMLAESGCR*WQKVAAADNLLQVH
Trigger: GTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGCATCTGCAGCCACTTTCTGCCAGCATCTGCAGCCAGCAAGCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 90 bp TGCTCACTGGGAGGTCCCTCTTTGACCTGGACGGTCAGTTCTGCCTaGCGAGCTCCTAGGGCATTGGTGACGTTGCAGATTAAAGTTGTG +
Preference number: 1 (lower is better)
Translates to: CSLGGPSLTWTVSSA*RAPRALVTLQIKVV
Trigger: CACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCAGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp TGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTaGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACA +
Preference number: 1 (lower is better)
Translates to: WLCTLISQMGETSWQ*GEDSVRGTLEGLST
Trigger: TGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
3UTR TCA 90 bp CAATCTGCAACCCAGAGGCTTCTGGGACCTCACAGCTCCTCAAGGTaGGATCGTATCAACCTGAAAAGATTCCCGACTCCCGTGCAGGAG +
Preference number: 1 (lower is better)
Translates to: QSATQRLLGPHSSSR*DRINLKRFPTPVQE
Trigger: CTCCTGCACGGGAGTCGGGAATCTTTTCAGGTTGATACGATCTCACCTTGAGGAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR GCA 90 bp GGAGAGGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTaGTGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTT +
Preference number: 1 (lower is better)
Translates to: GEGRWKPSPHLSWNV*CAPPPFADLNLCPF
Trigger: AAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 90 bp ATCCATCTTGGTCCTATAGGAGCGTGTCCTGAGCAACTGCAGCGCTaGCTCCCCCTGCATCCCTTCCCCCTTGTGTTGGAAATTGCATTT +
Preference number: 1 (lower is better)
Translates to: IHLGPIGACPEQLQR*LPLHPFPLVLEIAF
Trigger: AAATGCAATTTCCAACACAAGGGGGAAGGGATGCAGGGGGAGGCAGCGCTGCAGTTGCTCAGGACACGCTCCTATAGGACCAAGATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 90 bp CTCAAGATCATAGACCTTTTTAACTTGTCAGTTGCACTGAGCAGCTaGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGA +
Preference number: 1 (lower is better)
Translates to: LKIIDLFNLSVALSS*ASWVLGRIHLGPIG
Trigger: TCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAACTGACAAGTTAAAAAGGTCTATGATCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 90 bp TACCAAAATTCTCTGGTGGCCCACACCCTTCTGTGTGGTCTGCTATaGAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTTTA +
Preference number: 1 (lower is better)
Translates to: YQNSLVAHTLLCGLL*SKGLTLPKERSGPL
Trigger: TAAAGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACACAGAAGGGTGTGGGCCACCAGAGAATTTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 90 bp GCTTTAATGAGATTCTGGGTGCTGGAGACAGACAAGGAGCTTACGTaGCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGG +
Preference number: 1 (lower is better)
Translates to: ALMRFWVLETDKELT*HQSNQCSFISPTLW
Trigger: CCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGGCACGTAAGCTCCTTGTCTGTCTCCAGCACCCAGAATCTCATTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 90 bp TTTGTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTaGACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGGT +
Preference number: 1 (lower is better)
Translates to: FVNVINEPVNKAPWL*TLISQMGETSWQWG
Trigger: ACCCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
3UTR CCA 90 bp TCGAGGGACACAGATGACAGTGCCAAAGGACCTCACGGGAACATTTaGACCAATAGAAATAAATCCCGATCCCCAGCAGGATCAGAAAAA +
Preference number: 1 (lower is better)
Translates to: SRDTDDSAKGPHGNI*TNRNKSRSPAGSEK
Trigger: TTTTTCTGATCCTGCTGGGGATCGGGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTGTCCCTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 90 bp ACAGTGTTGTGTAAAACTGGATATCCATGTGCAGAAGAATGGAGCTaGACCATTACACTCCAAACACAAATTAGAATGGATCCCTCATGT +
Preference number: 1 (lower is better)
Translates to: TVLCKTGYPCAEEWS*TITLQTQIRMDPSC
Trigger: ACATGAGGGATCCATTCTAATTTGTGTTTGGAGTGTAATGGTCCAGCTCCATTCTTCTGCACATGGATATCCAGTTTTACACAACACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 90 bp ACATTCACAGTGTTGTGTAAAACTGGATATCCATGTGCAGAAGAATaGAGCTGGACCATTACACTCCAAACACAAATTAGAATGGATCCC +
Preference number: 1 (lower is better)
Translates to: TFTVLCKTGYPCAEE*SWTITLQTQIRMDP
Trigger: GGGATCCATTCTAATTTGTGTTTGGAGTGTAATGGTCCAGCTCCATTCTTCTGCACATGGATATCCAGTTTTACACAACACTGTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 90 bp CAGAAGAATGGAGCTGGACCATTACACTCCAAACACAAATTAGAATaGATCCCTCATGTCTTTTTATCTTCTAATTTTGGGACGTTTATG +
Preference number: 1 (lower is better)
Translates to: QKNGAGPLHSKHKLE*IPHVFLSSNFGTFM
Trigger: CATAAACGTCCCAAAATTAGAAGATAAAAAGACATGAGGGATCCATTCTAATTTGTGTTTGGAGTGTAATGGTCCAGCTCCATTCTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CAA 90 bp GGCACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATaGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: GTGREAGLFGGGLHP*GSGPTLEAHVLASS
Trigger: GGAGCTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp GTGCCAGACAGGAACCCTGGCACCTGGCTCGTATTGGGCATCCCGCCCAGGTCTGGGCCCTGCGTTTGGTaGAAGACGGCCATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: VPDRNPGTWLVLGIPPRSGPCVW*KTAMLP
Trigger: TGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCC...AGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCTGTCTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTCTGGGGCCCTGCGTTTaGTGGAAGACGGCCATGCTG +
Preference number: 2 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPLGPCV*WKTAML
Trigger: CAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAG...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR GCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGTGGGCTCTGGGTTGCTaGGAGCATCGCAGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVWALGC*EHRRSG
Trigger: CCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCA...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGGAGTGCCAGGTGATTTaGGCTGGCGGGCGACCCCCT +
Preference number: 2 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWECQVI*AGGRPP
Trigger: AGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTC...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR GCA 90 bp TCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCGCCCAGGTCTGAGTaGCAGGTGATTTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: SLSPLSPDAVTLCPLSVDPPRSE*QVIWAG
Trigger: GCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGG...ATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR GCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGCTGTGGGCTCTGGGTTaGTGCGAGCATCGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVLWALG*CEHRRS
Trigger: TGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAG...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CAA 90 bp TGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTaGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: CQLQSLSPLSPDAVT*CPLSVDPGKSCSLC
Trigger: GCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
3UTR CAA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTaGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: RVVLETYELAPAPVV*RSGTGREAGLFGGG
Trigger: ACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR TCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGGTCTGAGTGCCAGGTaGTTTGGGCTGGCGGGCGAC +
Preference number: 2 (lower is better)
Translates to: RVVLETYELAPAPVVLRSGLSAR*FGLAGD
Trigger: GTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp GAGTGCTCACTGGGAGGTCCCTCTTTGACCTGGACGGTCAGTTCTGCCTGGCGAACCTCAGCTGTGTTCTaGGGCTTGGCAAGCACTCGG +
Preference number: 2 (lower is better)
Translates to: ECSLGGPSLTWTVSSAWRTSAVF*GLASTR
Trigger: CCGAGTGCTTGCCAAGCCCCAGAACACAGCTGAGGT...TCGCCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCAGTGAGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR TCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGATCCTGCCTGGTAGCTaGTCTTGGAGTCTTGGGCCA +
Preference number: 2 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVILPGS*SWSLGP
Trigger: TGGCCCAAGACTCCAAGATCAGCTACCAGGCAGGAT...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCAGGAGCTGGGCGCCCTaGGCCACAGCAAAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIRSWAP*ATAKGG
Trigger: GCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCT...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp TCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATGGTCCCTCTTTGACCTaGACGGTCAGTTCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: SLSPLSPDAVTLCPLSVDGPSLT*TVSSAW
Trigger: CCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACC...ATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGCCTATATGGCTCCACTaGGAGAGGGCAGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVPIWLH*ERADGS
Trigger: GCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGG...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR TCA 90 bp TCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCTCGAGGGACACAGATaGCAGTGCCAAAGGACCTCA +
Preference number: 2 (lower is better)
Translates to: SLSPLSPDAVTLCPLSVDLEGHR*QCQRTS
Trigger: TGAGGTCCTTTGGCACTGTCATCTGTGTCCCTCGAG...ATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAACCAGGTGATTTGGGCTaGCGGGCGACCCCCTGTGGA +
Preference number: 2 (lower is better)
Translates to: KIGPFILSSWAFISKPLEPGDLG*RATPCG
Trigger: TCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGG...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCGCACCTGGCTCGTATTaGGCATCCCGCCCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSAPGSY*ASRPGL
Trigger: CAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGC...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGGTCGGGTCCAACTCTaGAGGCCCACGTCCTTGCCA +
Preference number: 2 (lower is better)
Translates to: TCCCENQVLPIWLHWERAGRVQL*RPTSLP
Trigger: TGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACC...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCACAGGGAGGGAGGCTaGTCTCTTTGGAGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWHREGG*SLWRGS
Trigger: AGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTCCTATATGGCTCCACTaGGAGAGGGCAGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSPIWLH*ERADGS
Trigger: GCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGG...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGAGCAGCTGGGCCTCCTaGGTCTTGGGTCGCATCCAT +
Preference number: 2 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWSSWAS*VLGRIH
Trigger: ATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCT...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTCCCCTGCCATCCTGCTaGTTCCTATCTCTTCCCCAC +
Preference number: 2 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVPLPSC*FLSLPH
Trigger: GTGGGGAAGAGATAGGAACCAGCAGGATGGCAGGGG...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGGAATCCCAGCCCTTATaGCCCTCTTCATTTAGCGTC +
Preference number: 2 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVESQPL*PSSFSV
Trigger: GACGCTAAATGAAGAGGGCCATAAGGGCTGGGATTC...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CCA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTACTCGGGAGGCTGAGATaGAAGGATAGCCCGAGCCCA +
Preference number: 2 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVLGRLR*KDSPSP
Trigger: TGGGCTCGGGCTATCCTTCCATCTCAGCCTCCCGAG...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR TCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGAAGTCAAGGCTGCAATaGACTGTGATCTCACCACTG +
Preference number: 2 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVKSRLQ*TVISPL
Trigger: CAGTGGTGAGATCACAGTTCATTGCAGCCTTGACTT...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR TCA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTCCCACCTCAGCCTTCTaGGTAGCTGGGATTACAAGC +
Preference number: 2 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVPTSAF*VAGITS
Trigger: GCTTGTAATCCCAGCTACTCAGAAGGCTGAGGTGGG...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR GCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCCGCGCCCAGTCTGGCTaGCACGAATTCCAGCCGTTT +
Preference number: 2 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIRAQSG*HEFQPF
Trigger: AAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCG...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGGGCAGAAGTATCACTTaGAGCCAAGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVGRSIT*SQEFKT
Trigger: GGTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCC...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp ATTCCTGGCTCTGTGGACTCCAAGGATGCCCCCTCCCTCCAGAAAAAGGTCATCGGGTCGCATCCATCTTaGTCCTATAGGAGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: IPGSVDSKDAPSLQKKVIGSHPS*SYRSVS
Trigger: GGACACGCTCCTATAGGACCAAGATGGATGCGACCC...GATGACCTTTTTCTGGAGGGAGGGGGCATCCTTGGAGTCCACAGAGCCAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR GCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSGGPRP*QLQSLS
Trigger: GGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCC...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGATTAGCCAGACGTGGTaGCACATACCTGTAGTCATA +
Preference number: 2 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVISQTW*HIPVVI
Trigger: TATGACTACAGGTATGTGCCACCACGTCTGGCTAAT...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp ACATTTTCACCCCAAGCAATCTGCAACCCAGAGGCTTCTGGGACCTCACAGCTCCATCGCCTACGTCGCTaGTGGGAACAGAACTCAGCA +
Preference number: 2 (lower is better)
Translates to: TFSPQAICNPEASGTSQLHRLRR*WEQNSA
Trigger: TGCTGAGTTCTGTTCCCACCAGCGACGTAGGCGATG...GAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGAAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CAA 90 bp GCCCACACCCTTCTGTGTGGTCTGCTATGCAGTAAAGGCTTAACCTaGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: AHTLLCGLLCSKGLT*PKERSGPLSSAPGH
Trigger: ATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACACAGAAGGGTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR GCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCTGGCAGAAAGTGGCTaGAGATGCTGGCAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWLAESG*RCWQKV
Trigger: CACTTTCTGCCAGCATCTGCAGCCACTTTCTGCCAG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGGCTCCGCGCCCAGTCTaGCTGCCACGAATTCCAGCC +
Preference number: 2 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWAPRPV*LPRIPA
Trigger: GGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGC...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCAGGAACCCTGGCACCTaGCTCGTATTGGGCATCCCG +
Preference number: 2 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCRNPGT*LVLGIP
Trigger: CGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCT...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGGGAGGCTGGTCTCTTTaGAGGGGGTCTTCATCCATT +
Preference number: 2 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWGGWSL*RGSSSI
Trigger: AATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCC...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCTGATCTTGGAGTCTTaGGCCACTCTGGGTGGTTCA +
Preference number: 2 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWLILES*ATLGGS
Trigger: TGAACCACCCAGAGTGGCCCAAGACTCCAAGATCAG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 90 bp TGGACGGTCAGTTCTGCCTGGCGAGCTCCTAGGGCATTGGTGACGTaGCAGATTAAAGTTGTGTTGATTGGTTTGTCCACAGGACGGATC +
Preference number: 2 (lower is better)
Translates to: WTVSSAWRAPRALVT*QIKVVLIGLSTGRI
Trigger: GATCCGTCCTGTGGACAAACCAATCAACACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CAA 90 bp GTTCCATCCCACGTGGTGACAGTACACATGAAACCTGTCTGCTCCTaGATTTCCACAAAAGACCCCATTGCACACAGCCGCTGGAGGTAC +
Preference number: 2 (lower is better)
Translates to: VPSHVVTVHMKPVCS*ISTKDPIAHSRWRY
Trigger: GTACCTCCAGCGGCTGTGTGCAATGGGGTCTTTTGTGGAAATCAAGGAGCAGACAGGTTTCATGTGTACTGTCACCACGTGGGATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR GCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTGGCGTTACGGGACATaGCTGAGTGCTCACTGGGAG +
Preference number: 2 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCWRYGT*LSAHWE
Trigger: CTCCCAGTGAGCACTCAGGCATGTCCCGTAACGCCA...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR TCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCGCTGAGGTGGGAGGATaGCTTGGCGTTGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCAEVGG*LGVEKS
Trigger: TGACTTCTCAACGCCAAGTCATCCTCCCACCTCAGC...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR GCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATTCTCAAAGCTCTCGTaGTCCACCTTGCAGGTCACA +
Preference number: 2 (lower is better)
Translates to: KIGPFILSSWAFISKPLEFSKLS*STLQVT
Trigger: TGTGACCTGCAAGGTGGAGCACGAGAGCTTTGAGAA...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR GCA 90 bp ATTCCTGGCTCTGTGGACTCCAAGGATGCCCCCTCCCTCCAGAAAAAGGTCATCAGGAATTCTGCTGTCTaGCCTCAAGATCATAGACCT +
Preference number: 2 (lower is better)
Translates to: IPGSVDSKDAPSLQKKVIRNSAV*PQDHRP
Trigger: AGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCT...GATGACCTTTTTCTGGAGGGAGGGGGCATCCTTGGAGTCCACAGAGCCAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACCGAATTCCAGCCGTTTaGACTCCGAATAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHRIPAV*TPNSWG
Trigger: GCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCG...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCTTCTTGCCGTCCACCTaGCTTGAGGGCACCAATATC +
Preference number: 2 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTFLPST*LEGTNI
Trigger: GATATTGGTGCCCTCAAGCCAGGTGGACGGCAAGAA...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCCCTATATGGCTCCACTaGGAGAGGGCAGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCPIWLH*ERADGS
Trigger: GCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGG...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 90 bp TCTTTGACCTGGACGGTCAGTTCTGCCTGGCGAGCTCCTAGGGCATaGGTGACGTTGCAGATTAAAGTTGTGTTGATTGGTTTGTCCACA +
Preference number: 2 (lower is better)
Translates to: SLTWTVSSAWRAPRA*VTLQIKVVLIGLST
Trigger: TGTGGACAAACCAATCAACACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGTCCAGGTCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR TCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTTTCACAGTCAGCAGCTaGGGCTTCTCAAAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: PALPSLSRANPLSCLFSLFTVSS*GFSKLS
Trigger: CGAGAGCTTTGAGAAGCCTCAGCTGCTGACTGTGAA...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR GCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCCTGGCAGAAAGTGGCTaGAGATGCTGGCAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCLAESG*RCWQKV
Trigger: CACTTTCTGCCAGCATCTGCAGCCACTTTCTGCCAG...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCGGAGGCTGGTCTCTTTaGAGGGGGTCTTCATCCATT +
Preference number: 2 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCGGWSL*RGSSSI
Trigger: AATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCC...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTTCTGGTTGGCAGTATTaGCAGTACTTCTTGCATGTT +
Preference number: 2 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVSGWQY*QYFLHV
Trigger: AACATGCAAGAAGTACTGCCAATACTGCCAACCAGA...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CCA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTAAAGAAACATACTCTTTaGCCCAGCAATTCCACCTCC +
Preference number: 2 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVKKHTL*PSNSTS
Trigger: GGAGGTGGAATTGCTGGGCCAAAGAGTATGTTTCTT...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR TCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGTTCATGCTAATGATGTaGTTTATGGTGGGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWFMLMM*FMVGVL
Trigger: CAAGACCCCCACCATAAATCACATCATTAGCATGAA...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR TCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTAATTGCAGCCTCTGGTaGCCAGGGTCAGTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFNCSLW*PGSVAV
Trigger: AACAGCCACTGACCCTGGTCACCAGAGGCTGCAATT...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR GCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTGTGAGAATCAGGTaGTGCCTATATGGCTCCACT +
Preference number: 2 (lower is better)
Translates to: PALPSLSRANPLSCLFSLAVRIR*CLYGST
Trigger: AGTGGAGCCATATAGGCAGCACCTGATTCTCACAGC...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 90 bp AGATCTCGAGTGAGCTGCTCTGGTTGGCAGTATTGGCAGTACTTCTaGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATA +
Preference number: 2 (lower is better)
Translates to: RSRVSCSGWQYWQYF*HVVTCCCENQVLPI
Trigger: TATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTACTGCCAATACTGCCAACCAGAGCAGCTCACTCGAGATCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR TCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCCAGCTGCTTGCGGCCTaGATTGCAGCCTCTGGTGAC +
Preference number: 2 (lower is better)
Translates to: FSQTVFFIRGILLSALKIQLLAA*IAASGD
Trigger: GTCACCAGAGGCTGCAATTCAGGCCGCAAGCAGCTG...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR GCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCCGGGACATGCCTGAGTaGTCACTGGGAGGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: FSQTVFFIRGILLSALKIRDMPE*SLGGPS
Trigger: AGAGGGACCTCCCAGTGAGCACTCAGGCATGTCCCG...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR GCA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFGGPRP*QLQSLS
Trigger: GGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCC...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTGGACTCCGAATAGCTaGGGCCCTGCGTTTGGTGGA +
Preference number: 2 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNWTPNS*GPAFGG
Trigger: TCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCA...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTGGAGGCTGGTCTCTTTaGAGGGGGTCTTCATCCATT +
Preference number: 2 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFGGWSL*RGSSSI
Trigger: AATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCC...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 90 bp AAATCCTCTGTCCTGCTTATTTTCTCTTGCAGAGCAGCTCAAGCTTaGCATTCCCATTTAGCATCTTGGCCCAAGGTCTTCTCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: KSSVLLIFSCRAAQA*HSHLASWPKVFSPS
Trigger: TGAGGGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGAATGCAAAGCTTGAGCTGCTCTGCAAGAGAAAATAAGCAGGACAGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR TCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGCACTGGCTCTCCAGTaGGCTGGACCTTCTGAACCT +
Preference number: 2 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQALALQ*AGPSEP
Trigger: AGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGC...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCCTGTGTTCTGGGGCTTaGCAAGCACTCGGAGCCAGA +
Preference number: 2 (lower is better)
Translates to: NVFSQTVFFIRGILLSALLCSGA*QALGAR
Trigger: TCTGGCTCCGAGTGCTTGCCAAGCCCCAGAACACAG...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTTCTGTCTGTGGATCCTaGGAAGAGCTGTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFSVCGS*EELFSL
Trigger: CAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGA...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR TCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCAATTGCAGCCTCTGGTaGCCAGGGTCAGTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: FSQTVFFIRGILLSALKINCSLW*PGSVAV
Trigger: AACAGCCACTGACCCTGGTCACCAGAGGCTGCAATT...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACGGAGGCTGGTCTCTTTaGAGGGGGTCTTCATCCATT +
Preference number: 2 (lower is better)
Translates to: CAPPPFADLNLCPFTVINGGWSL*RGSSSI
Trigger: AATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCC...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR TCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACCTCTCTGCTCACAGCTaGATAGGAGACATGCCCATT +
Preference number: 2 (lower is better)
Translates to: CAPPPFADLNLCPFTVINLSAHS*IGDMPI
Trigger: AATGGGCATGTCTCCTATTCAGCTGTGAGCAGAGAG...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR GCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCATTGGCAGTACTTCTTaGATGTTGTCACATGTTGCT +
Preference number: 2 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCIGSTS*MLSHVA
Trigger: AGCAACATGTGACAACATGCAAGAAGTACTGCCAAT...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTTTTACCAAAATTCTCTaGTGGCCCACACCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFFTKIL*WPTPFC
Trigger: ACAGAAGGGTGTGGGCCACCAGAGAATTTTGGTAAA...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 90 bp TCGCTGGTGGGAACAGAACTCAGCACAACTTCTGTGAGGGTTCATTaGTCAATATCTATCACAATGACAAGAAACATACTCTTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: SLVGTELSTTSVRVH*SISITMTRNILFGP
Trigger: TGGGCCAAAGAGTATGTTTCTTGTCATTGTGATAGATATTGACAAATGAACCCTCACAGAAGTTGTGCTGAGTTCTGTTCCCACCAGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp TTGGGCATCCCGCCCAGGTCTGAGTGCCAGGTGATTTaGGCTGGCGGGCGACCCCCTGTGGAGACGCAGCGG +
Preference number: 3 (lower is better)
Translates to: LGIPPRSECQVI*AGGRPPVETQR
Trigger: CCGCTGCGTCTCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGGGATGCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 72 bp TGGCACCTGGCTCGTATTGGGCATCCCGCCCAGGTCTaGGTGCCAGGTGATTTGGGCTGGCGGGCGACCCCC +
Preference number: 3 (lower is better)
Translates to: WHLARIGHPAQV*VPGDLGWRATP
Trigger: GGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 72 bp TCGTATTGGGCATCCCGCCCAGGTCTGAGTGCCAGGTaGTTTGGGCTGGCGGGCGACCCCCTGTGGAGACGC +
Preference number: 3 (lower is better)
Translates to: SYWASRPGLSAR*FGLAGDPLWRR
Trigger: GCGTCTCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGGGATGCCCAATACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp GGTTTGTCCACAGGACGGATCAGGAGCTGGGCGCCCTaGGCCACAGCAAAGGGTGGCAGGGGACCCATGGTC +
Preference number: 3 (lower is better)
Translates to: GLSTGRIRSWAP*ATAKGGRGPMV
Trigger: GACCATGGGTCCCCTGCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCCTGTGGACAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 72 bp ATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGAC +
Preference number: 3 (lower is better)
Translates to: IGVGSNSGGPRP*QLQSLSPLSPD
Trigger: GTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 72 bp CCGCGCCCAGTCTGGCTGCCACGAATTCCAGCCGTTTaGACTCCGAATAGCTGGGGCCCTGCGTTTGGTGGA +
Preference number: 3 (lower is better)
Translates to: PRPVWLPRIPAV*TPNSWGPAFGG
Trigger: TCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CAA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGTGGAGGCCCACGTCCTaGCCAGCTCCAGTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVWRPTS*PAPVSL
Trigger: GAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCA...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 72 bp CAGCGAGGCATTCCGCAGCTCCGCGCCCAGTCTGGCTaGCACGAATTCCAGCCGTTTGGACTCCGAATAGCT +
Preference number: 3 (lower is better)
Translates to: QRGIPQLRAQSG*HEFQPFGLRIA
Trigger: AGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGAATGCCTCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp TCCTCAGCGAGGCATTCCGCAGCTCCGCGCCCAGTCTaGCTGCCACGAATTCCAGCCGTTTGGACTCCGAAT +
Preference number: 3 (lower is better)
Translates to: SSARHSAAPRPV*LPRIPAVWTPN
Trigger: ATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGAATGCCTCGCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp GTGTTGATTGGTTTGTCCACAGGACGGATCAGGAGCTaGGCGCCCTGGGCCACAGCAAAGGGTGGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: VLIGLSTGRIRS*APWATAKGGRG
Trigger: TCCCCTGCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCCTGTGGACAAACCAATCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp GGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTaGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTG +
Preference number: 3 (lower is better)
Translates to: GRLVSLEGVFIH*GRVQLWRPTSL
Trigger: CAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR TCA 72 bp GGGTCGCATCCATCTTGGTCCTATAGGAGCGTGTCCTaGGCAACTGCAGCGCTGCCTCCCCCTGCATCCCTT +
Preference number: 3 (lower is better)
Translates to: GSHPSWSYRSVS*ATAALPPPASL
Trigger: AAGGGATGCAGGGGGAGGCAGCGCTGCAGTTGCTCAGGACACGCTCCTATAGGACCAAGATGGATGCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 72 bp GGTCCTATAGGAGCGTGTCCTGAGCAACTGCAGCGCTaGCTCCCCCTGCATCCCTTCCCCCTTGTGTTGGAA +
Preference number: 3 (lower is better)
Translates to: GPIGACPEQLQR*LPLHPFPLVLE
Trigger: TTCCAACACAAGGGGGAAGGGATGCAGGGGGAGGCAGCGCTGCAGTTGCTCAGGACACGCTCCTATAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 72 bp CTGCCACGAATTCCAGCCGTTTGGACTCCGAATAGCTaGGGCCCTGCGTTTGGTGGAAGACGGCCATGCTGC +
Preference number: 3 (lower is better)
Translates to: LPRIPAVWTPNS*GPAFGGRRPCC
Trigger: GCAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp ACCCATGGTCGTGCTCCAATTATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCAGGTCAGGGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: THGRAPIIACGL*VAASIAGQGGL
Trigger: GAGGCCACCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTATAATTGGAGCACGACCATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR-3UTR CAA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGGGCACCTGGCTCGTATaGGGCATCCCGCCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMGTWLV*GIPPRS
Trigger: AGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCC...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 72 bp GCCATGGGCACTGGCTCTCCAGTGAGCTGGACCTTCTaGACCTCAGCTGTGTTCTGGGGCTTGGCAAGCACT +
Preference number: 3 (lower is better)
Translates to: AMGTGSPVSWTF*TSAVFWGLAST
Trigger: AGTGCTTGCCAAGCCCCAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp TTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTaGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAAC +
Preference number: 3 (lower is better)
Translates to: FEVWHREGGWSL*RGSSSIGVGSN
Trigger: GTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 72 bp CGGTCCCATTCTTTTGGCCAGGGATTGGTTGAGCGGTaGGCGGCGCTGGTGAATGAGACCGGAAAAGACGCT +
Preference number: 3 (lower is better)
Translates to: RSHSFGQGLVER*AALVNETGKDA
Trigger: AGCGTCTTTTCCGGTCTCATTCACCAGCGCCGCCCACCGCTCAACCAATCCCTGGCCAAAAGAATGGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CAA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGTGGAGGCCCACGTCCTaGCCAGCTCCAGTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMWRPTS*PAPVSL
Trigger: GAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCA...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR TCA 72 bp TGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTaGGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: WRPMNLHLPPSF*GLAQGGRLVSL
Trigger: CAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 72 bp GCAGCTGAGGCTTCTCAAAGCTCTCGTGCTCCACCTTaGAGGTCACATTCTTGCCGTCCACCTGGCTTGAGG +
Preference number: 3 (lower is better)
Translates to: AAEASQSSRAPP*RSHSCRPPGLR
Trigger: CCTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGAGCTTTGAGAAGCCTCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 72 bp ACCAGGAAGATGATGGCGTTACGGGACATGCCTGAGTaGTCACTGGGAGGTCCCTCTTTGACCTGGACGGTC +
Preference number: 3 (lower is better)
Translates to: TRKMMALRDMPE*SLGGPSLTWTV
Trigger: GACCGTCCAGGTCAAAGAGGGACCTCCCAGTGAGCACTCAGGCATGTCCCGTAACGCCATCATCTTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 72 bp GAGCGTGTCCTGAGCAACTGCAGCGCTGCCTCCCCCTaGATCCCTTCCCCCTTGTGTTGGAAATTGCATTTG +
Preference number: 3 (lower is better)
Translates to: ERVLSNCSAASP*IPSPLCWKLHL
Trigger: CAAATGCAATTTCCAACACAAGGGGGAAGGGATGCAGGGGGAGGCAGCGCTGCAGTTGCTCAGGACACGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 72 bp GGAGGTCCCTCTTTGACCTGGACGGTCAGTTCTGCCTaGCGAGCTCCTAGGGCATTGGTGACGTTGCAGATT +
Preference number: 3 (lower is better)
Translates to: GGPSLTWTVSSA*RAPRALVTLQI
Trigger: AATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp TCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTaGATCCTGGGAAGAGCTGTTCTCTCTGCTCACAGC +
Preference number: 3 (lower is better)
Translates to: SVPTLSPCALCL*ILGRAVLSAHS
Trigger: GCTGTGAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
3UTR TCA 72 bp CAGAACCAGGAAGATGATGGCGTTACGGGACATGCCTaGGTGCTCACTGGGAGGTCCCTCTTTGACCTGGAC +
Preference number: 3 (lower is better)
Translates to: QNQEDDGVTGHA*VLTGRSLFDLD
Trigger: GTCCAGGTCAAAGAGGGACCTCCCAGTGAGCACTCAGGCATGTCCCGTAACGCCATCATCTTCCTGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 72 bp GAGGCGCTGGCATGCTCTGTACTCGAGGGACACAGATaGCAGTGCCAAAGGACCTCACGGGAACATTTGGAC +
Preference number: 3 (lower is better)
Translates to: EALACSVLEGHR*QCQRTSREHLD
Trigger: GTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTGTCCCTCGAGTACAGAGCATGCCAGCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR TCA 72 bp GCGCTGGTGAATGAGACCGGAAAAGACGCTGCTGGGTaGGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCT +
Preference number: 3 (lower is better)
Translates to: ALVNETGKDAAG*GFCCWMRFLVP
Trigger: AGGAACGAGAAACCGCATCCAGCAGCAGAAACCTCACCCAGCAGCGTCTTTTCCGGTCTCATTCACCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp TGCTCCACCTTGCAGGTCACATTCTTGCCGTCCACCTaGCTTGAGGGCACCAATATCCAGAGGCTGGTGACA +
Preference number: 3 (lower is better)
Translates to: CSTLQVTFLPST*LEGTNIQRLVT
Trigger: TGTCACCAGCCTCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCAAGGTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp TGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTaGGAGAGGGCAGATGGAAGCCGTCGCCTCATCTGT +
Preference number: 3 (lower is better)
Translates to: CCENQVLPIWLH*ERADGSRRLIC
Trigger: ACAGATGAGGCGACGGCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 72 bp GTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATaGCTCCACTGGGAGAGGGCAGATGGAAGCCGTCGC +
Preference number: 3 (lower is better)
Translates to: VTCCCENQVLPI*LHWERADGSRR
Trigger: GCGACGGCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 72 bp ACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATaGGGGAAACCTCATGGCAGTGGGGTGAGGATTCAG +
Preference number: 3 (lower is better)
Translates to: TRLPGSAPSSVK*GKPHGSGVRIQ
Trigger: CTGAATCCTCACCCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406449.8
3UTR CCA 72 bp CACCTATACCAAAATTCTGGGCCCACTCTCCATTCCTaGCTCTGTGGACTCCAAGGATGCCCCCTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: HLYQNSGPTLHS*LCGLQGCPLPP
Trigger: TGGAGGGAGGGGGCATCCTTGGAGTCCACAGAGCCAGGAATGGAGAGTGGGCCCAGAATTTTGGTATAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR TCA 72 bp TTTATGGTGGGGGTCTTGGGCCACACGGTATTGGCTTaGTGTATGAGGTCAGCCGTGTGGATGGTGAGCTGC +
Preference number: 3 (lower is better)
Translates to: FMVGVLGHTVLA*CMRSAVWMVSC
Trigger: GCAGCTCACCATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCCACCATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 72 bp CAGAACAAACAGCAGAGCAGCAGAACTGGGCCTGCATaGTGTGCCCGGAGTAGAGCCAGGCAATCCAGTTTT +
Preference number: 3 (lower is better)
Translates to: QNKQQSSRTGPA*CARSRARQSSF
Trigger: AAAACTGGATTGCCTGGCTCTACTCCGGGCACAGCATGCAGGCCCAGTTCTGCTGCTCTGCTGTTTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp CTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATaGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTG +
Preference number: 3 (lower is better)
Translates to: LCTLISQMGETS*QWGEDSVRGTL
Trigger: CAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
3UTR GCA 72 bp AGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTaGTGTGCACCTCCTCCCTTTGCTGATCTTAATCTC +
Preference number: 3 (lower is better)
Translates to: RWKPSPHLSWNV*CAPPPFADLNL
Trigger: GAGATTAAGATCAGCAAAGGGAGGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 72 bp AATCCCAGCCCTTATGGCCCTCTTCATTTAGCGTCTTaGTTCCATGCCTCTGGTTCCATCCCACGTGGTGAC +
Preference number: 3 (lower is better)
Translates to: NPSPYGPLHLAS*FHASGSIPRGD
Trigger: GTCACCACGTGGGATGGAACCAGAGGCATGGAAGCAAGACGCTAAATGAAGAGGGCCATAAGGGCTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp CAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTaGGGTCCCACTGGCCTCCTCACCCTTGAGCCCTTT +
Preference number: 3 (lower is better)
Translates to: QSNQCSFISPTL*GPTGLLTLEPF
Trigger: AAAGGGCTCAAGGGTGAGGAGGCCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR TCA 72 bp GTCTTGGGCCACTCTGGGTGGTTCATGCTAATGATGTaGTTTATGGTGGGGGTCTTGGGCCACACGGTATTG +
Preference number: 3 (lower is better)
Translates to: VLGHSGWFMLMM*FMVGVLGHTVL
Trigger: CAATACCGTGTGGCCCAAGACCCCCACCATAAATCACATCATTAGCATGAACCACCCAGAGTGGCCCAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR TCA 72 bp GACCTCACAGCTCCTCAAGGTGAGATCGTATCAACCTaGAAAGATTCCCGACTCCCGTGCAGGAGCAATGCA +
Preference number: 3 (lower is better)
Translates to: DLTAPQGEIVST*KDSRLPCRSNA
Trigger: TGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAGGTTGATACGATCTCACCTTGAGGAGCTGTGAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR TCA 72 bp TGCCTGGAATGCAGCAGCCATCTTGGCACCAGAGGGTaGTGCCAATATGTGGAGGAAAGCAGAACAAACAGC +
Preference number: 3 (lower is better)
Translates to: CLECSSHLGTRG*CQYVEESRTNS
Trigger: GCTGTTTGTTCTGCTTTCCTCCACATATTGGCATCACCCTCTGGTGCCAAGATGGCTGCTGCATTCCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp GCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTaGGCATTCATCTCTAAGCCCTTGGAATATCCTGCC +
Preference number: 3 (lower is better)
Translates to: AQRKIGPFILSS*AFISKPLEYPA
Trigger: GGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CAA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTAGGCAGAAGTATCACTaGGAGCCAAGAGTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVRQKYH*EPRVQD
Trigger: GTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCCT...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CAA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTATTCCCATTTAGCATCTaGGCCCAAGGTCTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVFPFSI*AQGLLS
Trigger: GGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGAA...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CAA 90 bp GACACAGATGACAGTGCCAAAGGACCTCACGGGAACATTTGGACCAATAGAAATCTCTCGTGCTCCACCTaGCAGGTCACATTCTTGCCG +
Preference number: 3 (lower is better)
Translates to: DTDDSAKGPHGNIWTNRNLSCST*QVTFLP
Trigger: CGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGAG...ATTTCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 72 bp TCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTaGTGCCTATATGGCTCCACTGGGAGAGGGCAGATG +
Preference number: 3 (lower is better)
Translates to: SCMLSHVAVRIR*CLYGSTGRGQM
Trigger: CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 72 bp TCTCTGGTGGCCCACACCCTTCTGTGTGGTCTGCTATaGAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCG +
Preference number: 3 (lower is better)
Translates to: SLVAHTLLCGLL*SKGLTLPKERS
Trigger: CGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACACAGAAGGGTGTGGGCCACCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR GCA 72 bp GTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTaGACCCTCATCAGTCAAATGGGGGAAACCTCATGG +
Preference number: 3 (lower is better)
Translates to: VINEPVNKAPWL*TLISQMGETSW
Trigger: CCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
3UTR GCA 72 bp ATTTCAGTAGCACAGACATTTTCACCCCAAGCAATCTaGAACCCAGAGGCTTCTGGGACCTCACAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: ISVAQTFSPQAI*NPEASGTSQLL
Trigger: GAGGAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGAAAATGTCTGTGCTACTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp ATAGACCTTTTTAACTTGTCAGTTGCACTGAGCAGCTaGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGT +
Preference number: 3 (lower is better)
Translates to: IDLFNLSVALSS*ASWVLGRIHLG
Trigger: ACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAACTGACAAGTTAAAAAGGTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 72 bp ATTTTCACCCCAAGCAATCTGCAACCCAGAGGCTTCTaGGACCTCACAGCTCCTCAAGGTGAGATCGTATCA +
Preference number: 3 (lower is better)
Translates to: IFTPSNLQPRGF*DLTAPQGEIVS
Trigger: TGATACGATCTCACCTTGAGGAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR-3UTR CAA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCGCTGGGGCCCTGCGTTaGGTGGAAGACGGCCATGCT +
Preference number: 3 (lower is better)
Translates to: FSQTVFFIRGILLSALKIAGALR*VEDGHA
Trigger: AGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGC...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR GCA 72 bp CCATCCCACGTGGTGACAGTACACATGAAACCTGTCTaGTCCTTGATTTCCACAAAAGACCCCATTGCACAC +
Preference number: 3 (lower is better)
Translates to: PSHVVTVHMKPV*SLISTKDPIAH
Trigger: GTGTGCAATGGGGTCTTTTGTGGAAATCAAGGAGCAGACAGGTTTCATGTGTACTGTCACCACGTGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp ACAGATGACAGTGCCAAAGGACCTCACGGGAACATTTaGACCAATAGAAATAAATCCCGATCCCCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: TDDSAKGPHGNI*TNRNKSRSPAG
Trigger: TCCTGCTGGGGATCGGGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CCA 72 bp CTCTGGACACAAAGATCTCGAGTGAGCTGCTCTGGTTaGCAGTATTGGCAGTACTTCTTGCATGTTGTCACA +
Preference number: 3 (lower is better)
Translates to: LWTQRSRVSCSG*QYWQYFLHVVT
Trigger: TGTGACAACATGCAAGAAGTACTGCCAATACTGCCAACCAGAGCAGCTCACTCGAGATCTTTGTGTCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CAA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCGGGGGTCTTCATCCATaGGGGTCGGGTCCAACTCTG +
Preference number: 3 (lower is better)
Translates to: FSQTVFFIRGILLSALKIGGLHP*GSGPTL
Trigger: CAGAGTTGGACCCGACCCCAATGGATGAAGACCCCC...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CAA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATATGGAGACCTATGAACTaGCACCTGCCCCCGTCGTTT +
Preference number: 3 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIWRPMN*HLPPSF
Trigger: AAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCA...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CAA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCAGAGCAGCTCAAGCTTaGCATTCCCATTTAGCATCT +
Preference number: 3 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCRAAQA*HSHLAS
Trigger: AGATGCTAAATGGGAATGCAAAGCTTGAGCTGCTCT...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR-3UTR CAA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCAGGTGGGAGGATGACTaGGCGTTGAGAAGTCAAGGC +
Preference number: 3 (lower is better)
Translates to: FSQTVFFIRGILLSALKIRWEDD*ALRSQG
Trigger: GCCTTGACTTCTCAACGCCAAGTCATCCTCCCACCT...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CCA 72 bp GTGTTGTGTAAAACTGGATATCCATGTGCAGAAGAATaGAGCTGGACCATTACACTCCAAACACAAATTAGA +
Preference number: 3 (lower is better)
Translates to: VLCKTGYPCAEE*SWTITLQTQIR
Trigger: TCTAATTTGTGTTTGGAGTGTAATGGTCCAGCTCCATTCTTCTGCACATGGATATCCAGTTTTACACAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp AAAGTTATTCACTACAACATTGTAATAGTGAAAGGCTaGAAAGGATACAAATGCCTGTCCTTAGAGGCCTCG +
Preference number: 3 (lower is better)
Translates to: KVIHYNIVIVKG*KGYKCLSLEAS
Trigger: CGAGGCCTCTAAGGACAGGCATTTGTATCCTTTCCAGCCTTTCACTATTACAATGTTGTAGTGAATAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CCA 72 bp GGAGCTGGACCATTACACTCCAAACACAAATTAGAATaGATCCCTCATGTCTTTTTATCTTCTAATTTTGGG +
Preference number: 3 (lower is better)
Translates to: GAGPLHSKHKLE*IPHVFLSSNFG
Trigger: CCCAAAATTAGAAGATAAAAAGACATGAGGGATCCATTCTAATTTGTGTTTGGAGTGTAATGGTCCAGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GTGCCAGACAGGAACCCTGGCACCTGGCTCGTATTGGGCATCCCGCCCAGGTCTGTTGCTCCGAGCAGCTaGGCCTCCCGCGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VPDRNPGTWLVLGIPPRSVAPSS*ASRGRL
Trigger: GAGACGCCCGCGGGAGGCCCAGCTGCTCGGAGCAAC...AGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCTGTCTGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp CATCCTCAGCGAGGCATTCCGCAGCTCCGCGCCCAGTCTGGCTGCCACGAATTCGCCACGCGGCGGCCATaGCTCGGGCCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: HPQRGIPQLRAQSGCHEFATRRP*LGPCQL
Trigger: CAACTGGCATGGCCCGAGCCATGGCCGCCGCGTGGC...GAATTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGAATGCCTCGCTGAGGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp AGTGACTGTGCCAGACAGGAACCCTGGCACCTGGCTCGTATTGGGCATCCCGCCGCGGGCGACCCCCTGTaGAGACGCAGCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SDCARQEPWHLARIGHPAAGDPL*RRSGPW
Trigger: CCATGGCCCGCTGCGTCTCCACAGGGGGTCGCCCGC...GGCGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCTGTCTGGCACAGTCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp GTTGCACTGAGCAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTGCGGGCGACCCCCTGTaGAGACGCAGCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VALSSWASWVLGRIHLGPAGDPL*RRSGPW
Trigger: CCATGGCCCGCTGCGTCTCCACAGGGGGTCGCCCGC...AGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGTGGAGACGCAGCGGGCCATGGGCACTGGCTCTCCAGTGAGCTGGACCTTCTGCTGCCCCCGTCGTTTTaGGGTCTGGCACAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CGDAAGHGHWLSSELDLLLPPSF*GLAQGG
Trigger: CCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAG...CAGAAGGTCCAGCTCACTGGAGAGCCAGTGCCCATGGCCCGCTGCGTCTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp CAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGGGGCCGCTCCTCCAGTaGCTGGGGTGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QLQSLSPLSPDAVTLCPLGPLLQ*LGWEGE
Trigger: TTCCCCTTCCCACCCCAGGCACTGGAGGAGCGGCCC...CAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp GCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGCGGGCGACCCCCTGTaGAGACGCAGCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: APWLCTLISQMGETSWQWAGDPL*RRSGPW
Trigger: CCATGGCCCGCTGCGTCTCCACAGGGGGTCGCCCGC...CCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp CATCCTCAGCGAGGCATTCCGCAGCTCCGCGCCCAGTCTGGCTGCCACGAATTCGAGTGCCAGGTGATTTaGGCTGGCGGGCGACCCCCT +
Preference number: 4 (lower is better)
Translates to: HPQRGIPQLRAQSGCHEFECQVI*AGGRPP
Trigger: AGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTC...GAATTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGAATGCCTCGCTGAGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp TGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTAGGAGCTGGGCGCCCTaGGCCACAGCAAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: CQLQSLSPLSPDAVTLCPRSWAP*ATAKGG
Trigger: GCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCT...AGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp TGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTGGACGGATCAGGAGCTaGGCGCCCTGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: CQLQSLSPLSPDAVTLCPGRIRS*APWATA
Trigger: TGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCC...AGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGAGCCGGGCACCTGGGTaGGCGCCTGCACGACGACGT +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVSRAPG*APARRR
Trigger: ACGTCGTCGTGCAGGCGCCCACCCAGGTGCCCGGCT...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTCTGCCCCCGTCGTTTTaGGGTCTGGCACAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPLPPSF*GLAQGG
Trigger: CCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAG...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCCGCTCCTCCAGTGCCTaGGGTGGGAAGGGGAATACC +
Preference number: 4 (lower is better)
Translates to: ASSSLSPLSVPTLSPCALRSSSA*GGKGNT
Trigger: GGTATTCCCCTTCCCACCCCAGGCACTGGAGGAGCG...GAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp TTGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTTGGGCACCGGTTCCTaGGGGTGGCCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: LPAPVSLPSQSRRCHLVPLGTGS*GWPGQH
Trigger: GTGCTGTCCTGGCCACCCCCAGGAACCGGTGCCCAA...GGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp CAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGGCTCCGCGCCCAGTCTaGCTGCCACGAATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLQSLSPLSPDAVTLCPLAPRPV*LPRIPA
Trigger: GGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGC...CAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGGCTCCGCGCCCAGTCTaGCTGCCACGAATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGAPRPV*LPRIPA
Trigger: GGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGC...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCGAGTGCCAGGTGATTTaGGCTGGCGGGCGACCCCCT +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSECQVI*AGGRPP
Trigger: AGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTC...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GTTGCACTGAGCAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTGACGTCCCCGGTTCCTaGGGGTGGCCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: VALSSWASWVLGRIHLGPDVPGS*GWPGQH
Trigger: GTGCTGTCCTGGCCACCCCCAGGAACCGGGGACGTC...AGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 72 bp CCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTaGGCCAGGGATTGGTTGAGCGGTGGGCGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PVWSSLPGGPIL*ARDWLSGGRRW
Trigger: CCAGCGCCGCCCACCGCTCAACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGGGTCTGAGTGCCAGGTaGTTTGGGCTGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVGLSAR*FGLAGD
Trigger: GTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACC...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TTGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCCATCCCGCCCAGGTCTaGGTGCCAGGTGATTTGGGC +
Preference number: 4 (lower is better)
Translates to: LPAPVSLPSQSRRCHLVPHPAQV*VPGDLG
Trigger: GCCCAAATCACCTGGCACTCAGACCTGGGCGGGATG...GGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCATCCCGCCCAGGTCTaGGTGCCAGGTGATTTGGGC +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQHPAQV*VPGDLG
Trigger: GCCCAAATCACCTGGCACTCAGACCTGGGCGGGATG...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGGGGCCGCTCCTCCAGTaGCTGGGGTGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWGPLLQ*LGWEGE
Trigger: TTCCCCTTCCCACCCCAGGCACTGGAGGAGCGGCCC...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCCATGGCTCGGGCCATaGCAGTTGCTCCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQPWLGP*QLLRAA
Trigger: AGCTGCTCGGAGCAACTGGCATGGCCCGAGCCATGG...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTCCGCCCAGGTCTGAGTaGCAGGTGATTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPPPRSE*QVIWAG
Trigger: GCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGG...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTGGGCTCTGGGTTGCTaGGAGCATCGCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGWALGC*EHRRSG
Trigger: CCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCA...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCGCTGAGGCGCTGGCATaGTCTGTACTCGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: ASSSLSPLSVPTLSPCALAEALA*SVLEGH
Trigger: GTGTCCCTCGAGTACAGAGCATGCCAGCGCCTCAGC...GAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp CTTGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LASSSLSPLSVPTLSPCAGGPRP*QLQSLS
Trigger: GGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCC...GGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR GCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGACCTGGGTGGGCGCCTaGACGACGACGTCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWTWVGA*TTTSPV
Trigger: AACCGGGGACGTCGTCGTGCAGGCGCCCACCCAGGT...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATGCCACGCGGCGGCCATaGCTCGGGCCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDATRRP*LGPCQL
Trigger: CAACTGGCATGGCCCGAGCCATGGCCGCCGCGTGGC...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTGGGCCCTGCGTTTGGTaGAAGACGGCCATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CQLQSLSPLSPDAVTLCPGPCVW*KTAMLP
Trigger: TGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCC...AGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp TCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCCCAGGTGATTTGGGCTaGCGGGCGACCCCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SLPSQSRRCHLVPSVCGSPGDLG*RATPCG
Trigger: TCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGG...GGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp GTTGCACTGAGCAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTGAGTGCCAGGTGATTTaGGCTGGCGGGCGACCCCCT +
Preference number: 4 (lower is better)
Translates to: VALSSWASWVLGRIHLGPECQVI*AGGRPP
Trigger: AGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTC...AGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCGCACCTGGCTCGTATTaGGCATCCCGCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSAPGSY*ASRPGL
Trigger: CAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGC...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGGCACCTGGCTCGTATTaGGCATCCCGCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGAPGSY*ASRPGL
Trigger: CAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGC...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp ACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGCCGGGCACCTGGGTaGGCGCCTGCACGACGACGT +
Preference number: 4 (lower is better)
Translates to: TRLPGSAPSSVKWGKPHGSRAPG*APARRR
Trigger: ACGTCGTCGTGCAGGCGCCCACCCAGGTGCCCGGCT...GCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGGCCGTCCACCTGGCTTaGGGGCACCAATATCCAGAG +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWAVHLA*GHQYPE
Trigger: CTCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGC...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCCAGCTGCTTGCGGCCTaGATTGCAGCCTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSQLLAA*IAASGD
Trigger: GTCACCAGAGGCTGCAATTCAGGCCGCAAGCAGCTG...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTATAGGAGCGTGTCCTaGGCAACTGCAGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ASSSLSPLSVPTLSPCALYRSVS*ATAALP
Trigger: AGGCAGCGCTGCAGTTGCTCAGGACACGCTCCTATA...GAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp CAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGCCATGGCTCGGGCCATaGCAGTTGCTCCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QSLSPLSPDAVTLCPLSVPWLGP*QLLRAA
Trigger: AGCTGCTCGGAGCAACTGGCATGGCCCGAGCCATGG...CACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGGGAAGACGGCCATGCTaGCAGATTCACCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGGRRPC*QIHHAA
Trigger: CGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCC...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTTGCACTGAGCAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTTGGGCTCTGGGTTGCTaGGAGCATCGCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VALSSWASWVLGRIHLGPWALGC*EHRRSG
Trigger: CCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCA...AGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGCTGTGGGCTCTGGGTTaGTGCGAGCATCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGLWALG*CEHRRS
Trigger: TGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAG...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLSPLSVPTLSPCALCLWGGPRP*QLQSLS
Trigger: GGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCC...CCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGCGGGCGACCCCCTGTaGAGACGCAGCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERAAGDPL*RRSGPW
Trigger: CCATGGCCCGCTGCGTCTCCACAGGGGGTCGCCCGC...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGGAGTGCCAGGTGATTTaGGCTGGCGGGCGACCCCCT +
Preference number: 4 (lower is better)
Translates to: LPGSAPSSVKWGKPHGSGECQVI*AGGRPP
Trigger: AGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTC...CCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGGCACCTGGCTCGTATTaGGCATCCCGCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSLSPLSVPTLSPCALCLAPGSY*ASRPGL
Trigger: CAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGC...CAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp ACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCGGACGGATCAGGAGCTaGGCGCCCTGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TSWQWGEDSVRGTLEGLSGRIRS*APWATA
Trigger: TGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCC...GCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp CATCCTCAGCGAGGCATTCCGCAGCTCCGCGCCCAGTCTGGCTGCCACGAATTCGGTCCCTCTTTGACCTaGACGGTCAGTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: HPQRGIPQLRAQSGCHEFGPSLT*TVSSAW
Trigger: CCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACC...GAATTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGAATGCCTCGCTGAGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp CAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGGGTCGGGTCCAACTCTaGAGGCCCACGTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QSRRCHLVPSVCGSWEELGRVQL*RPTSLP
Trigger: TGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACC...CAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTCGTCGTTTTGAGGTCTaGCACAGGGAGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPRRFEV*HREGGW
Trigger: CCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACG...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGCAGCTGGGCCTCCTaGGTCTTGGGTCGCATCCAT +
Preference number: 4 (lower is better)
Translates to: PLSVPTLSPCALCLWILGSSWAS*VLGRIH
Trigger: ATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCT...TCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGGAGCGGAGGGGAGTTaGCGGCCAGTCCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERAGAEGS*RPVPPG
Trigger: GCCTGGCGGGACTGGCCGCCAACTCCCCTCCGCTCC...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS-3UTR CCA 90 bp ACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCGACGTCCCCGGTTCCTaGGGGTGGCCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: TSWQWGEDSVRGTLEGLSDVPGS*GWPGQH
Trigger: GTGCTGTCCTGGCCACCCCCAGGAACCGGGGACGTC...GCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCCCGTAAAGAAGCCGGGCACCTaGGTGGGCGCCTGCACGACG +
Preference number: 4 (lower is better)
Translates to: WGEDSVRGTLEGLSTEPVKKPGT*VGACTT
Trigger: CGTCGTGCAGGCGCCCACCCAGGTGCCCGGCTTCTT...TACGGGCTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp ACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCGGTCTGAGTGCCAGGTaGTTTGGGCTGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: TRLPGSAPSSVKWGKPHGGLSAR*FGLAGD
Trigger: GTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACC...GCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp GCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCGGGGGTAGTACACGGTaGGGTTCACAGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: APVSLPSQSRRCHLVPSVGGSTR*GSQSAA
Trigger: AGCTGCTGACTGTGAACCTCACCGTGTACTACCCCC...GACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR TCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCGGGGGTAGTACACGGTaGGGTTCACAGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSGGSTR*GSQSAA
Trigger: AGCTGCTGACTGTGAACCTCACCGTGTACTACCCCC...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TTGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCGGGGGTAGTACACGGTaGGGTTCACAGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPAPVSLPSQSRRCHLVPGGSTR*GSQSAA
Trigger: AGCTGCTGACTGTGAACCTCACCGTGTACTACCCCC...GGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR TCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGCAGCTGCTTGCGGCCTaGATTGCAGCCTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVQLLAA*IAASGD
Trigger: GTCACCAGAGGCTGCAATTCAGGCCGCAAGCAGCTG...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGGGTGGAAGACGGCCATaGTGCCAGATTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQGGRRP*CQIHHA
Trigger: GGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACC...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGACGCTCCTGCTGCCCTaGGGGAACGTGACGAACAGG +
Preference number: 4 (lower is better)
Translates to: LPGSAPSSVKWGKPHGSGTLLLP*GNVTNR
Trigger: CCTGTTCGTCACGTTCCCGCAGGGCAGCAGGAGCGT...CCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp CTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGATGGGCTCTGGGTTGCTaGGAGCATCGCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSVPTLSPCALCLWILGRWALGC*EHRRSG
Trigger: CCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCA...TCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR GCA 90 bp TCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGCTGTGGGCTCTGGGTTaGTGCGAGCATCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSLSPLSVPTLSPCALCLLWALG*CEHRRS
Trigger: TGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAG...CAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR GCA 90 bp TCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGCGGGACATGCCTGAGTaGTCACTGGGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLSPLSVPTLSPCALCLRDMPE*SLGGPS
Trigger: AGAGGGACCTCCCAGTGAGCACTCAGGCATGTCCCG...CAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp GCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCGACGCTGTCACCTTGTaGCCTCTGTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: ASSSLSPLSVPTLSPCALDAVTL*PLSVDP
Trigger: AGGATCCACAGACAGAGGGCACAAGGTGACAGCGTC...GAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGGCCACGCGGCGGCCATaGCTCGGGCCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWATRRP*LGPCQL
Trigger: CAACTGGCATGGCCCGAGCCATGGCCGCCGCGTGGC...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGGCTGGGGCCCTGCGTTTaGTGGAAGACGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SLALHPHQSNGGNLMAVGLGPCV*WKTAML
Trigger: CAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAG...CCCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGTGGACTCCGAATAGCTaGGGCCCTGCGTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQWTPNS*GPAFGG
Trigger: TCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCA...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGACCTCAGCTGTGTTCTaGGGCTTGGCAAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGTSAVF*GLASTR
Trigger: CCGAGTGCTTGCCAAGCCCCAGAACACAGCTGAGGT...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATCCAGGTGATTTGGGCTaGCGGGCGACCCCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDPGDLG*RATPCG
Trigger: TCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGG...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCACCAGGTGATTTGGGCTaGCGGGCGACCCCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGSLALHPHQSNGGNLMAPGDLG*RATPCG
Trigger: TCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGG...TGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCGCCAGACAGGAACCCTaGCACCTGGCTCGTATTGGG +
Preference number: 4 (lower is better)
Translates to: SLPSQSRRCHLVPSVCGSARQEP*HLARIG
Trigger: CCCAATACGAGCCAGGTGCCAGGGTTCCTGTCTGGC...GGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp TCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGCATCGCAGGTCAGGGTaGCCTCATTCTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SPLSPDAVTLCPLSVDPGHRRSG*PHSGQG
Trigger: ACCTTGGCCAGAATGAGGCCACCCTGACCTGCGATG...CCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp CTTGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCA +
Preference number: 4 (lower is better)
Translates to: LASSSLSPLSVPTLSPCAIACGL*VAASIA
Trigger: TGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTAT...GGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGAGGAGCTGGGCGCCCTaGGCCACAGCAAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMRSWAP*ATAKGG
Trigger: GCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCT...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAAGGAGCTGGGCGCCCTaGGCCACAGCAAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EPVNKAPWLCTLISQMGERSWAP*ATAKGG
Trigger: GCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCT...TTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGGACGGATCAGGAGCTaGGCGCCCTGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSGRIRS*APWATA
Trigger: TGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGGGGGTCTTCATCCATTaGGGTCGGGTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQGVFIH*GRVQLW
Trigger: CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCC...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCGGGGTCTTCATCCATTaGGGTCGGGTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSGVFIH*GRVQLW
Trigger: CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCC...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGCGTCGTTTTGAGGTCTaGCACAGGGAGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSRRCHLVPSVCGSWEELRRFEV*HREGGW
Trigger: CCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACG...CAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGAAGAAGCCGGGCACCTaGGTGGGCGCCTGCACGACG +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMKKPGT*VGACTT
Trigger: CGTCGTGCAGGCGCCCACCCAGGTGCCCGGCTTCTT...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGCATTGCACTCCAGCCTaGGTGACAGGAGACACCGTC +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWHCTPA*VTGDTV
Trigger: GACGGTGTCTCCTGTCACCCAGGCTGGAGTGCAATG...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CAA 72 bp AGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATaGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTT +
Preference number: 4 (lower is better)
Translates to: REAGLFGGGLHP*GSGPTLEAHVL
Trigger: AAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGGTGAGCTGGACCTTCTaGACCTCAGCTGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQVSWTF*TSAVFW
Trigger: CCAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCAC...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGGTGAGCTGGACCTTCTaGACCTCAGCTGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGVSWTF*TSAVFW
Trigger: CCAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCAC...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCCCGTACATCCCGCCCAGGTCTaGGTGCCAGGTGATTTGGGC +
Preference number: 4 (lower is better)
Translates to: WGEDSVRGTLEGLSTEPVHPAQV*VPGDLG
Trigger: GCCCAAATCACCTGGCACTCAGACCTGGGCGGGATG...TACGGGCTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp GCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGCCGTCCACCTGGCTTaGGGGCACCAATATCCAGAG +
Preference number: 4 (lower is better)
Translates to: APWLCTLISQMGETSWQWAVHLA*GHQYPE
Trigger: CTCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGC...CCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGCCAGAACCAGGAAGATaGTGGCGTTACGGGACATGC +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWPEPGR*WRYGTC
Trigger: GCATGTCCCGTAACGCCATCATCTTCCTGGTTCTGG...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000425690.8
CDS-3UTR TCA 90 bp TGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTCGAGGGACACAGATaGCAGTGCCAAAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: CQLQSLSPLSPDAVTLCPLEGHR*QCQRTS
Trigger: TGAGGTCCTTTGGCACTGTCATCTGTGTCCCTCGAG...AGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp CTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGACATGCCCATTAGCTaGGGCGCTGGCATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSPLSPDAVTLCPLSVDPDMPIS*GAGMLC
Trigger: ACAGAGCATGCCAGCGCCTCAGCTAATGGGCATGTC...AGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR TCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCATCCTGCCTGGTAGCTaGTCTTGGAGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSILPGS*SWSLGP
Trigger: TGGCCCAAGACTCCAAGATCAGCTACCAGGCAGGAT...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGAATTGCAGCCTCTGGTaGCCAGGGTCAGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGNCSLW*PGSVAV
Trigger: AACAGCCACTGACCCTGGTCACCAGAGGCTGCAATT...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGGGCAGGAGGAGCACTTaGGCCCAGGAGTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMGRRST*AQEFQP
Trigger: GGGCTGGAACTCCTGGGCTCAAGTGCTCCTCCTGCC...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp TGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTGTCAGCTGTGACACATaGGTCACCTCCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: CQLQSLSPLSPDAVTLCPVSCDT*VTSMLG
Trigger: GCCCAACATGGAGGTGACGCATGTGTCACAGCTGAC...AGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTTGGGCTCTGGGTTGCTaGGAGCATCGCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSWALGC*EHRRSG
Trigger: CCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCA...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGGACGCTGTCACCTTGTaGCCTCTGTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQDAVTL*PLSVDP
Trigger: AGGATCCACAGACAGAGGGCACAAGGTGACAGCGTC...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCCCAGTCTGGCTGCCACGAATTCCAGCCGTTTGGACTCCGAATAGCTGGGGCCTCCCAGCTTGCTGGCTaGAGATGCTGGCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AQSGCHEFQPFGLRIAGASQLAG*RCWQKV
Trigger: CACTTTCTGCCAGCATCTGCAGCCAGCAAGCTGGGA...GGCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATAGCGCTGCCTCCCCCTaGATCCCTTCCCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDSAASP*IPSPLC
Trigger: ACACAAGGGGGAAGGGATGCAGGGGGAGGCAGCGCT...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCACCTGGGTGGGCGCCTaGACGACGACGTCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSTWVGA*TTTSPV
Trigger: AACCGGGGACGTCGTCGTGCAGGCGCCCACCCAGGT...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTCACCCCAAGCAATCTaGAACCCAGAGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPSPQAI*NPEASG
Trigger: CCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGA...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp TGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGGGGCCCTGCGTTTGGTaGAAGACGGCCATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WQWGEDSVRGTLEGLSTEGPCVW*KTAMLP
Trigger: TGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCC...CTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TTGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCCGAATTCCAGCCGTTTaGACTCCGAATAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPAPVSLPSQSRRCHLVPRIPAV*TPNSWG
Trigger: GCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCG...GGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGCTGTGTTCTGGGGCTTaGCAAGCACTCGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVLCSGA*QALGAR
Trigger: TCTGGCTCCGAGTGCTTGCCAAGCCCCAGAACACAG...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCGCGGGCGACCCCCTGTaGAGACGCAGCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTAGDPL*RRSGPW
Trigger: CCATGGCCCGCTGCGTCTCCACAGGGGGTCGCCCGC...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGAGTGCCAGGTGATTTaGGCTGGCGGGCGACCCCCT +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSECQVI*AGGRPP
Trigger: AGGGGGTCGCCCGCCAGCCCAAATCACCTGGCACTC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCCATCGCAGGTCAGGGTaGCCTCATTCTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SLPSQSRRCHLVPSVCGSHRRSG*PHSGQG
Trigger: ACCTTGGCCAGAATGAGGCCACCCTGACCTGCGATG...GGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGAGGAGCTGGGCGCCCTaGGCCACAGCAAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWRSWAP*ATAKGG
Trigger: GCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCT...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTAAGGAGCTGGGCGCCCTaGGCCACAGCAAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVRSWAP*ATAKGG
Trigger: GCCACCCTTTGCTGTGGCCCAGGGCGCCCAGCTCCT...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GTTGCACTGAGCAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTGGGGTCTTCATCCATTaGGGTCGGGTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: VALSSWASWVLGRIHLGPGVFIH*GRVQLW
Trigger: CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCC...AGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGGTTGCACTGAGCAGCTaGGCCTCCTGGGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWVALSS*ASWVLG
Trigger: ACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGCGCCCAAGTCAGCTGTaGCACATGCGTCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWRPSQL*HMRHLH
Trigger: ATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCG...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCATGCCCTGCGGGAACGTaGCGAACAGGCAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: QGSLALHPHQSNGGNLMACPAGT*RTGRCS
Trigger: ACTACACCTGCCTGTTCGTCACGTTCCCGCAGGGCA...TGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp TCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGGCACTGGCTCTCCAGTaGGCTGGACCTTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: SQSRRCHLVPSVCGSWEEALALQ*AGPSEP
Trigger: AGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGC...CTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp CGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCTGGCCGTCCACCTGGCTTaGGGGCACCAATATCCAGAG +
Preference number: 4 (lower is better)
Translates to: RCHLVPSVCGSWEELFSLAVHLA*GHQYPE
Trigger: CTCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGC...CAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGTTCACAGTCAGCAGCTaGGGCTTCTCAAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWFTVSS*GFSKLS
Trigger: CGAGAGCTTTGAGAAGCCTCAGCTGCTGACTGTGAA...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTTGGGAGGTCCCTCTTTaGCCTGGACGGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VPTLSPCALCLWILGRAVWEVPL*PGRSVL
Trigger: CAGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCA...AACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp TCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGCCAGAACCAGGAAGATaGTGGCGTTACGGGACATGC +
Preference number: 4 (lower is better)
Translates to: SSLSPLSVPTLSPCALCLPEPGR*WRYGTC
Trigger: GCATGTCCCGTAACGCCATCATCTTCCTGGTTCTGG...CAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGCTCGAGGGACACAGATaGCAGTGCCAAAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVLEGHR*QCQRTS
Trigger: TGAGGTCCTTTGGCACTGTCATCTGTGTCCCTCGAG...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000425690.8
CDS-3UTR TCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGCACACGGTATTGGCTTaGTGTATGAGGTCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGHTVLA*CMRSAV
Trigger: CACGGCTGACCTCATACATCAAGCCAATACCGTGTG...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCATCCTGCCTGGTAGCTaGTCTTGGAGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLPSQSRRCHLVPSVCGSILPGS*SWSLGP
Trigger: TGGCCCAAGACTCCAAGATCAGCTACCAGGCAGGAT...GGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGGGCTGCAATGAGCTATaGTCGTGCCATTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWGCNEL*SCHCTP
Trigger: TGGAGTGCAATGGCACGATCATAGCTCATTGCAGCC...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGCTGCCAGATTCACCATaGCGCGCCCAAGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWLPDSP*RAQVSC
Trigger: ACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAG...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCGGAAGACGGCCATGCTaGCAGATTCACCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: PVNKAPWLCTLISQMGETGRRPC*QIHHAA
Trigger: CGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCC...GGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGGGTGGAAGACGGCCATaGTGCCAGATTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWGGRRP*CQIHHA
Trigger: GGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACC...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTCTCGTGCTCCACCTTaGAGGTCACATTCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPSRAPP*RSHSCR
Trigger: ACGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGA...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TGTGGAGACGCAGCGGGCCATGGGCACTGGCTCTCCAGTGAGCTGGACCTTCTGTTCTCAAAGCTCTCGTaGTCCACCTTGCAGGTCACA +
Preference number: 4 (lower is better)
Translates to: CGDAAGHGHWLSSELDLLFSKLS*STLQVT
Trigger: TGTGACCTGCAAGGTGGAGCACGAGAGCTTTGAGAA...CAGAAGGTCCAGCTCACTGGAGAGCCAGTGCCCATGGCCCGCTGCGTCTCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTGCTGAGGCGCTGGCATaGTCTGTACTCGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSAEALA*SVLEGH
Trigger: GTGTCCCTCGAGTACAGAGCATGCCAGCGCCTCAGC...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp TCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGGACGCTGTCACCTTGTaGCCTCTGTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: SSLSPLSVPTLSPCALCLDAVTL*PLSVDP
Trigger: AGGATCCACAGACAGAGGGCACAAGGTGACAGCGTC...CAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR GCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGCTGGCAGAAAGTGGCTaGAGATGCTGGCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWLAESG*RCWQKV
Trigger: CACTTTCTGCCAGCATCTGCAGCCACTTTCTGCCAG...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTTGTGGGTTATTTCCTaGCAGTCCCAGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: APVSLPSQSRRCHLVPSVLWVIS*QSQLAG
Trigger: GCCAGCAAGCTGGGACTGGCAGGAAATAACCCACAA...GACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGTTGTGGGTTATTTCCTaGCAGTCCCAGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWLWVIS*QSQLAG
Trigger: GCCAGCAAGCTGGGACTGGCAGGAAATAACCCACAA...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTAGCGCTGCCTCCCCCTaGATCCCTTCCCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSSAASP*IPSPLC
Trigger: ACACAAGGGGGAAGGGATGCAGGGGGAGGCAGCGCT...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGCCACGCGGCGGCCATaGCTCGGGCCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRATRRP*LGPCQL
Trigger: CAACTGGCATGGCCCGAGCCATGGCCGCCGCGTGGC...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCCAGGTGATTTGGGCTaGCGGGCGACCCCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWPGDLG*RATPCG
Trigger: TCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCGCCAGACAGGAACCCTaGCACCTGGCTCGTATTGGG +
Preference number: 4 (lower is better)
Translates to: PVNKAPWLCTLISQMGETARQEP*HLARIG
Trigger: CCCAATACGAGCCAGGTGCCAGGGTTCCTGTCTGGC...GGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGAGAGATGGATACCTCTaGGGGGTAGTACACGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQRDGYL*GVVHGE
Trigger: CTCACCGTGTACTACCCCCCAGAGGTATCCATCTCT...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTAGAGATGGATACCTCTaGGGGGTAGTACACGGTGAG +
Preference number: 4 (lower is better)
Translates to: CQLQSLSPLSPDAVTLCPRDGYL*GVVHGE
Trigger: CTCACCGTGTACTACCCCCCAGAGGTATCCATCTCT...AGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGCATCGCAGGTCAGGGTaGCCTCATTCTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWHRRSG*PHSGQG
Trigger: ACCTTGGCCAGAATGAGGCCACCCTGACCTGCGATG...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGATGTGCCCTCTGTCTGTaGATCCTGGGAAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PLSVPTLSPCALCLWILGCALCL*ILGRAV
Trigger: AACAGCTCTTCCCAGGATCCACAGACAGAGGGCACA...TCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCGGAGGCTGGTCTCTTTaGAGGGGGTCTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSGGWSL*RGSSSI
Trigger: AATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCC...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCGACGTCCCCGGTTCCTaGGGGTGGCCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIDVPGS*GWPGQH
Trigger: GTGCTGTCCTGGCCACCCCCAGGAACCGGGGACGTC...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTAAGAAGCCGGGCACCTaGGTGGGCGCCTGCACGACG +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSKKPGT*VGACTT
Trigger: CGTCGTGCAGGCGCCCACCCAGGTGCCCGGCTTCTT...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGCCCACTCTCCATTCCTaGCTCTGTGGACTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVPTLHS*LCGLQG
Trigger: TCCTTGGAGTCCACAGAGCCAGGAATGGAGAGTGGG...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGCGGAAAAGACGCTGCTaGGTGAGGTTTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVRKRRC*VRFLLL
Trigger: CAGCAGCAGAAACCTCACCCAGCAGCGTCTTTTCCG...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp TGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCCCGTACGCCCAAGTCAGCTGTaGCACATGCGTCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: WGEDSVRGTLEGLSTEPVRPSQL*HMRHLH
Trigger: ATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCG...TACGGGCTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGTGCCCTGCGGGAACGTaGCGAACAGGCAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMCPAGT*RTGRCS
Trigger: ACTACACCTGCCTGTTCGTCACGTTCCCGCAGGGCA...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGGGTGAGCTGGACCTTCTaGACCTCAGCTGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLALHPHQSNGGNLMAVGVSWTF*TSAVFW
Trigger: CCAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCAC...CCCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp TGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCCCGTAGCACTGGCTCTCCAGTaGGCTGGACCTTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: WGEDSVRGTLEGLSTEPVALALQ*AGPSEP
Trigger: AGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGC...TACGGGCTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATGCACTGGCTCTCCAGTaGGCTGGACCTTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDALALQ*AGPSEP
Trigger: AGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGC...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCTTCACAGTCAGCAGCTaGGGCTTCTCAAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LSPLSVPTLSPCALCLWIFTVSS*GFSKLS
Trigger: CGAGAGCTTTGAGAAGCCTCAGCTGCTGACTGTGAA...GATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR TCA 90 bp CTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTTTCACAGTCAGCAGCTaGGGCTTCTCAAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LSPLSPDAVTLCPLSVDPFTVSS*GFSKLS
Trigger: CGAGAGCTTTGAGAAGCCTCAGCTGCTGACTGTGAA...AGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR TCA 90 bp CAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGGGGGTAGTACACGGTaGGGTTCACAGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGSLALHPHQSNGGNLMAGGSTR*GSQSAA
Trigger: AGCTGCTGACTGTGAACCTCACCGTGTACTACCCCC...TGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTCTCTCTGCTCACAGCTaGATAGGAGACATGCCCATT +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPLSAHS*IGDMPI
Trigger: AATGGGCATGTCTCCTATTCAGCTGTGAGCAGAGAG...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGACTTGTCAGTTGCACTaGGCAGCTGGGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMTCQLH*AAGPPG
Trigger: CCCAGGAGGCCCAGCTGCTCAGTGCAACTGACAAGT...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTACTTGTCAGTTGCACTaGGCAGCTGGGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSTCQLH*AAGPPG
Trigger: CCCAGGAGGCCCAGCTGCTCAGTGCAACTGACAAGT...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCCGCTCCTCCAGTaGCTGGGGTGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRGPLLQ*LGWEGE
Trigger: TTCCCCTTCCCACCCCAGGCACTGGAGGAGCGGCCC...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCACCATGGCTCGGGCCATaGCAGTTGCTCCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERAPWLGP*QLLRAA
Trigger: AGCTGCTCGGAGCAACTGGCATGGCCCGAGCCATGG...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGGGAAGACGGCCATGCTaGCAGATTCACCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMGRRPC*QIHHAA
Trigger: CGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCC...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATGGTGGAAGACGGCCATaGTGCCAGATTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDGGRRP*CQIHHA
Trigger: GGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACC...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACACGCGCCCAGTCTGGCTaGCACGAATTCCAGCCGTTT +
Preference number: 4 (lower is better)
Translates to: SWQWGEDSVRGTLEGLSTRAQSG*HEFQPF
Trigger: AAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCG...TGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCCGCCCAGGTCTGAGTaGCAGGTGATTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWPPRSE*QVIWAG
Trigger: GCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CAAATGGGGGAAACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGCTGTGGGCTCTGGGTTaGTGCGAGCATCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QMGETSWQWGEDSVRGTLLWALG*CEHRRS
Trigger: TGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAG...CAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGTTTCCCCCATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERAGGPRP*QLQSLS
Trigger: GGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCC...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTGCTGTGAGAATCAGGTaGTGCCTATATGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPAVRIR*CLYGST
Trigger: AGTGGAGCCATATAGGCAGCACCTGATTCTCACAGC...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCGCCCTTGGAATATCCTaGCTGGTAGCTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSALGIS*LVADLG
Trigger: TCCAAGATCAGCTACCAGGCAGGATATTCCAAGGGC...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCACCTGGGTGGGCGCCTaGACGACGACGTCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTTWVGA*TTTSPV
Trigger: AACCGGGGACGTCGTCGTGCAGGCGCCCACCCAGGT...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAACCTGGGTGGGCGCCTaGACGACGACGTCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: VINEPVNKAPWLCTLISQTWVGA*TTTSPV
Trigger: AACCGGGGACGTCGTCGTGCAGGCGCCCACCCAGGT...TTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp AAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGACTCCGAATAGCTaGGGCCCTGCGTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KAPWLCTLISQMGETSWQWTPNS*GPAFGG
Trigger: TCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCA...CTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp ACATTTTCACCCCAAGCAATCTGCAACCCAGAGGCTTCTGGGACCTCACAGCTCGCACCTGGCTCGTATTaGGCATCCCGCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TFSPQAICNPEASGTSQLAPGSY*ASRPGL
Trigger: CAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGC...GAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGAAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp CAAATGGGGGAAACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGAGGAACCCTGGCACCTaGCTCGTATTGGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: QMGETSWQWGEDSVRGTLRNPGT*LVLGIP
Trigger: CGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCT...CAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGTTTCCCCCATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCATCGCAGGTCAGGGTaGCCTCATTCTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: WQWGEDSVRGTLEGLSTEHRRSG*PHSGQG
Trigger: ACCTTGGCCAGAATGAGGCCACCCTGACCTGCGATG...CTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCCCGTAATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCA +
Preference number: 4 (lower is better)
Translates to: WGEDSVRGTLEGLSTEPVIACGL*VAASIA
Trigger: TGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTAT...TACGGGCTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCGGACGGATCAGGAGCTaGGCGCCCTGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTGRIRS*APWATA
Trigger: TGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCC...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATACGGTCAGTTCTGCCTaGCGAGCTCCTAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDTVSSA*RAPRAL
Trigger: CAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGT...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGGTCCCTCTTTGACCTaGACGGTCAGTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QGSLALHPHQSNGGNLMAGPSLT*TVSSAW
Trigger: CCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACC...TGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp ACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCTGCTCACAGCACAGGGAGGGAGGCTaGTCTCTTTGGAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TLCPLSVDPGKSCSLCSQHREGG*SLWRGS
Trigger: AGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG...CTGTGAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTGTGAGCTGCTCTGGTTaGCAGTATTGGCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPVSCSG*QYWQYF
Trigger: GAAGTACTGCCAATACTGCCAACCAGAGCAGCTCAC...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGTCCCATTTAGCATCTTaGCCCAAGGTCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQSHLAS*PKVFSP
Trigger: GGGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGA...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCTCCCATTTAGCATCTTaGCCCAAGGTCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSSHLAS*PKVFSP
Trigger: GGGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGA...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTATCTCCCCAACTCTGTaGGGTCCCACTGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSISPTL*GPTGLL
Trigger: GAGGAGGCCAGTGGGACCCCACAGAGTTGGGGAGAT...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTAATGACAGTGTGCATTaGCCAGGCACGGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPNDSVH*PGTVAY
Trigger: ATAAGCCACCGTGCCTGGCCAATGCACACTGTCATT...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGCGCCCAAGTCAGCTGTaGCACATGCGTCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMRPSQL*HMRHLH
Trigger: ATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCG...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCTGCCCTGCGGGAACGTaGCGAACAGGCAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSCPAGT*RTGRCS
Trigger: ACTACACCTGCCTGTTCGTCACGTTCCCGCAGGGCA...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp ACATTTTCACCCCAAGCAATCTGCAACCCAGAGGCTTCTGGGACCTCACAGCTCTGCCCTGCGGGAACGTaGCGAACAGGCAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: TFSPQAICNPEASGTSQLCPAGT*RTGRCS
Trigger: ACTACACCTGCCTGTTCGTCACGTTCCCGCAGGGCA...GAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGAAAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGGCACTGGCTCTCCAGTaGGCTGGACCTTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMALALQ*AGPSEP
Trigger: AGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGC...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGCTCCTAGGGCATTGGTaGCGTTGCAGATTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWLLGHW*RCRLKL
Trigger: CAACTTTAATCTGCAACGTCACCAATGCCCTAGGAG...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGTGGGAGGTCCCTCTTTaGCCTGGACGGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMWEVPL*PGRSVL
Trigger: CAGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCA...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187830.2
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGCTCGAGGGACACAGATaGCAGTGCCAAAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: KAPWLCTLISQMGETSWQLEGHR*QCQRTS
Trigger: TGAGGTCCTTTGGCACTGTCATCTGTGTCCCTCGAG...CTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTGCCCCCGTCGTTTTaGGGTCTGGCACAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTLPPSF*GLAQGG
Trigger: CCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAG...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGCACACGGTATTGGCTTaGTGTATGAGGTCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWHTVLA*CMRSAV
Trigger: CACGGCTGACCTCATACATCAAGCCAATACCGTGTG...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTATCCTGCCTGGTAGCTaGTCTTGGAGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSILPGS*SWSLGP
Trigger: TGGCCCAAGACTCCAAGATCAGCTACCAGGCAGGAT...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp GCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCGAAAGTGGCTGCAGCTaGCAACCTTCTTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: APVSLPSQSRRCHLVPSVESGCS*QPSSSS
Trigger: TGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTC...GACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp GAAACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCCTCATGGCAGTGGGGTaGGGATTCAGTGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ETSWQWGEDSVRGTLEGLLMAVG*GFSERH
Trigger: GTGCCTCTCACTGAATCCTCACCCCACTGCCATGAG...GAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCACAGCTCCTCAAGGTaGGATCGTATCAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQHSSSR*DRINLK
Trigger: TTTCAGGTTGATACGATCTCACCTTGAGGAGCTGTG...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCGGGCCGCTCCTCCAGTaGCTGGGGTGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCGPLLQ*LGWEGE
Trigger: TTCCCCTTCCCACCCCAGGCACTGGAGGAGCGGCCC...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCCCATGGCTCGGGCCATaGCAGTTGCTCCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIPWLGP*QLLRAA
Trigger: AGCTGCTCGGAGCAACTGGCATGGCCCGAGCCATGG...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTGTCAGCTGTGACACATaGGTCACCTCCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSVSCDT*VTSMLG
Trigger: GCCCAACATGGAGGTGACGCATGTGTCACAGCTGAC...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGACAGGCAGGTGTAGTTaGCTTCATCCTCTACGCGCA +
Preference number: 4 (lower is better)
Translates to: APWLCTLISQMGETSWQWTGRCS*LHPLRA
Trigger: TGCGCGTAGAGGATGAAGGCAACTACACCTGCCTGT...CCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTACGCTCCTGCTGCCCTaGGGGAACGTGACGAACAGG +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSTLLLP*GNVTNR
Trigger: CCTGTTCGTCACGTTCCCGCAGGGCAGCAGGAGCGT...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATTGCAGGTCACATTCTTaGCGTCCACCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDCRSHS*RPPGLR
Trigger: CCTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCA...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGTCTCGTGCTCCACCTTaGAGGTCACATTCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: APWLCTLISQMGETSWQWSRAPP*RSHSCR
Trigger: ACGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGA...CCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCTGTGGGCTCTGGGTTaGTGCGAGCATCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWLWALG*CEHRRS
Trigger: TGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTACGGGACATGCCTGAGTaGTCACTGGGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVRDMPE*SLGGPS
Trigger: AGAGGGACCTCCCAGTGAGCACTCAGGCATGTCCCG...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCGTGTGGATGGTGAGCTaGTTAATTCAGCACTTTGGG +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSVWMVS*LIQHFG
Trigger: CCCAAAGTGCTGAATTAAGCAGCTCACCATCCACAC...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTGAGCAACTGCAGCGCTaGCTCCCCCTGCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSEQLQR*LPLHPF
Trigger: GAAGGGATGCAGGGGGAGGCAGCGCTGCAGTTGCTC...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAAGAGCAACTGCAGCGCTaGCTCCCCCTGCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLEEQLQR*LPLHPF
Trigger: GAAGGGATGCAGGGGGAGGCAGCGCTGCAGTTGCTC...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATTGCTCTGTACCTGAGTaGTCACTGGGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDCSVPE*SLGGPS
Trigger: AGAGGGACCTCCCAGTGAGCACTCAGGTACAGAGCA...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403059.8
CDS-3UTR GCA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGCTTCATTTAGCGTCTTaGTTCCATGCCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGLHLAS*FHASGS
Trigger: GGAACCAGAGGCATGGAAGCAAGACGCTAAATGAAG...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp AGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGGGCATGCTCTGTACGTaGTCCAATTATAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLSPLSVPTLSPCALCLWGMLCT*SNYSLW
Trigger: CCACAGGCTATAATTGGAGCACGTACAGAGCATGCC...CCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587785.1
CDS-3UTR CCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAAGGGCCCTGCGTTTGGTaGAAGACGGCCATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLEGPCVW*KTAMLP
Trigger: TGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCC...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCACGAATTCCAGCCGTTTaGACTCCGAATAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QGSLALHPHQSNGGNLMARIPAV*TPNSWG
Trigger: GCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCG...TGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGCTCCGCGCCCAGTCTaGCTGCCACGAATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRAPRPV*LPRIPA
Trigger: GGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGC...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTCTGTGTTCTGGGGCTTaGCAAGCACTCGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSLCSGA*QALGAR
Trigger: TCTGGCTCCGAGTGCTTGCCAAGCCCCAGAACACAG...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAACCTCAGCTGTGTTCTaGGGCTTGGCAAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: SWQWGEDSVRGTLEGLSTTSAVF*GLASTR
Trigger: CCGAGTGCTTGCCAAGCCCCAGAACACAGCTGAGGT...TGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTAGAGATGGATACCTCTaGGGGGTAGTACACGGTGAG +
Preference number: 4 (lower is better)
Translates to: SVPTLSPCALCLWILGRARDGYL*GVVHGE
Trigger: CTCACCGTGTACTACCCCCCAGAGGTATCCATCTCT...AGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp CTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGAGAGATGGATACCTCTaGGGGGTAGTACACGGTGAG +
Preference number: 4 (lower is better)
Translates to: LPGSAPSSVKWGKPHGSGRDGYL*GVVHGE
Trigger: CTCACCGTGTACTACCCCCCAGAGGTATCCATCTCT...CCCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACGGACGGATCAGGAGCTaGGCGCCCTGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHGRIRS*APWATA
Trigger: TGCTGTGGCCCAGGGCGCCCAGCTCCTGATCCGTCC...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGGTCCCTCTTTGACCTaGACGGTCAGTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSGPSLT*TVSSAW
Trigger: CCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000187830.2
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGTCTGTCTGTGGATCCTaGGAAGAGCTGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLSPLSVPTLSPCALCLWSVCGS*EELFSL
Trigger: CAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGA...CCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTGGTCGGGTCCAACTCTaGAGGCCCACGTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSGRVQL*RPTSLP
Trigger: TGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACC...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGGGGTCTTCATCCATTaGGGTCGGGTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSGVFIH*GRVQLW
Trigger: CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCCGTCGTTTTGAGGTCTaGCACAGGGAGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSRRFEV*HREGGW
Trigger: CCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACG...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCGTCGTTTTGAGGTCTaGCACAGGGAGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWRRFEV*HREGGW
Trigger: CCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCAGCAGCTGGGCCTCCTaGGTCTTGGGTCGCATCCAT +
Preference number: 4 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSSSWAS*VLGRIH
Trigger: ATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCT...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCACTCCAGACAAGTGACTaGAGCGGAGGGGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERALQTSD*SGGELA
Trigger: CGCCAACTCCCCTCCGCTCCAGTCACTTGTCTGGAG...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS-3UTR CCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCAAGAAGCCGGGCACCTaGGTGGGCGCCTGCACGACG +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCKKPGT*VGACTT
Trigger: CGTCGTGCAGGCGCCCACCCAGGTGCCCGGCTTCTT...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGCGTCACCTCCATGTTaGGCACCTGTAGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSASPPC*APVGSR
Trigger: CCTGCTACCTACAGGTGCCCAACATGGAGGTGACGC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 72 bp TTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTaGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LETYELAPAPVV*RSGTGREAGLF
Trigger: AAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCGCCCAAGTCAGCTGTaGCACATGCGTCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWRPSQL*HMRHLH
Trigger: ATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTGTGAGCTGGACCTTCTaGACCTCAGCTGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVVSWTF*TSAVFW
Trigger: CCAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCAC...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACGGTCTGAGTGCCAGGTaGTTTGGGCTGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHGLSAR*FGLAGD
Trigger: GTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACC...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGGTCTGAGTGCCAGGTaGTTTGGGCTGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: PALPSLSRANPLSCLFSLGLSAR*FGLAGD
Trigger: GTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACC...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GAAACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCCCAGAACCAGGAAGATaGTGGCGTTACGGGACATGC +
Preference number: 4 (lower is better)
Translates to: ETSWQWGEDSVRGTLEGLPEPGR*WRYGTC
Trigger: GCATGTCCCGTAACGCCATCATCTTCCTGGTTCTGG...GAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGCTCTCTGCTCACAGCTaGATAGGAGACATGCCCATT +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWLSAHS*IGDMPI
Trigger: AATGGGCATGTCTCCTATTCAGCTGTGAGCAGAGAG...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTCACACGGTATTGGCTTaGTGTATGAGGTCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSHTVLA*CMRSAV
Trigger: CACGGCTGACCTCATACATCAAGCCAATACCGTGTG...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGATCCTGCCTGGTAGCTaGTCTTGGAGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMILPGS*SWSLGP
Trigger: TGGCCCAAGACTCCAAGATCAGCTACCAGGCAGGAT...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCATATAGGAGCGTGTCCTaGGCAACTGCAGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERAYRSVS*ATAALP
Trigger: AGGCAGCGCTGCAGTTGCTCAGGACACGCTCCTATA...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAAGGCATGCTCTGTACCTaGGTGCTCACTGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLEGMLCT*VLTGRS
Trigger: GGACCTCCCAGTGAGCACTCAGGTACAGAGCATGCC...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403059.8
CDS-3UTR TCA 90 bp ATTCCTGGCTCTGTGGACTCCAAGGATGCCCCCTCCCTCCAGAAAAAGGTCATCCCCACCTCAGCCTTCTaGGTAGCTGGGATTACAAGC +
Preference number: 4 (lower is better)
Translates to: IPGSVDSKDAPSLQKKVIPTSAF*VAGITS
Trigger: GCTTGTAATCCCAGCTACTCAGAAGGCTGAGGTGGG...GATGACCTTTTTCTGGAGGGAGGGGGCATCCTTGGAGTCCACAGAGCCAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp ATTCCTGGCTCTGTGGACTCCAAGGATGCCCCCTCCCTCCAGAAAAAGGTCATCAAAGACGCTGCTGGGTaGGGTTTCTGCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: IPGSVDSKDAPSLQKKVIKDAAG*GFCCWM
Trigger: CATCCAGCAGCAGAAACCTCACCCAGCAGCGTCTTT...GATGACCTTTTTCTGGAGGGAGGGGGCATCCTTGGAGTCCACAGAGCCAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAGTCAGCTGTGACACATaGGTCACCTCCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: EPVNKAPWLCTLISQMGEVSCDT*VTSMLG
Trigger: GCCCAACATGGAGGTGACGCATGTGTCACAGCTGAC...TTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp ACATTTTCACCCCAAGCAATCTGCAACCCAGAGGCTTCTGGGACCTCACAGCTCCTGCCAGATTCACCATaGCGCGCCCAAGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TFSPQAICNPEASGTSQLLPDSP*RAQVSC
Trigger: ACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAG...GAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGAAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATACAGGCAGGTGTAGTTaGCTTCATCCTCTACGCGCA +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDTGRCS*LHPLRA
Trigger: TGCGCGTAGAGGATGAAGGCAACTACACCTGCCTGT...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGACCGCCCAGGTCTGAGTaGCAGGTGATTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRPPRSE*QVIWAG
Trigger: GCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGG...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAACCGCCCAGGTCTGAGTaGCAGGTGATTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VINEPVNKAPWLCTLISQPPRSE*QVIWAG
Trigger: GCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGG...TTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGAAGAGCTGTTCTCTCTaGTCACAGCTGAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQKSCSL*SQLNRR
Trigger: TCTCCTATTCAGCTGTGAGCAGAGAGAACAGCTCTT...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGGCCCTTGGAATATCCTaGCTGGTAGCTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: SQSRRCHLVPSVCGSWEEALGIS*LVADLG
Trigger: TCCAAGATCAGCTACCAGGCAGGATATTCCAAGGGC...CTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp GCCCAGTCTGGCTGCCACGAATTCCAGCCGTTTGGACTCCGAATAGCTGGGGCCCTGTGTGGTCTGCTATaGAGTAAAGGCTTAACCTTG +
Preference number: 4 (lower is better)
Translates to: AQSGCHEFQPFGLRIAGALCGLL*SKGLTL
Trigger: CAAGGTTAAGCCTTTACTGCATAGCAGACCACACAG...GGCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGTCCCAGCTTGCTGGCTaGAGATGCTGGCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMSQLAG*RCWQKV
Trigger: CACTTTCTGCCAGCATCTGCAGCCAGCAAGCTGGGA...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCTGCTCACAGGCTGAGGCGCTGGCATaGTCTGTACGTGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: TLCPLSVDPGKSCSLCSQAEALA*SVRAPI
Trigger: AATTGGAGCACGTACAGAGCATGCCAGCGCCTCAGC...CTGTGAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587785.1
CDS-3UTR CCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTCGCTCCTCCAGTGCCTaGGGTGGGAAGGGGAATACC +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPRSSSA*GGKGNT
Trigger: GGTATTCCCCTTCCCACCCCAGGCACTGGAGGAGCG...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCGCTCCTCCAGTGCCTaGGGTGGGAAGGGGAATACC +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTRSSSA*GGKGNT
Trigger: GGTATTCCCCTTCCCACCCCAGGCACTGGAGGAGCG...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTGCGTCACCTCCATGTTaGGCACCGGTTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPASPPC*APVPGG
Trigger: ACCCCCAGGAACCGGTGCCCAACATGGAGGTGACGC...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTGGGCCCTGCGTTTGGTaGAAGACGGCCATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPGPCVW*KTAMLP
Trigger: TGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCC...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGACTGGGGCCCTGCGTTTaGTGGAAGACGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRLGPCV*WKTAML
Trigger: CAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAG...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGTGGACTCCGAATAGCTaGGGCCCTGCGTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWWTPNS*GPAFGG
Trigger: TCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCA...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCGCTCCGCGCCCAGTCTaGCTGCCACGAATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VNVINEPVNKAPWLCTLIAPRPV*LPRIPA
Trigger: GGCTGGAATTCGTGGCAGCCAGACTGGGCGCGGAGC...GATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp ATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGCACCTGGCTCGTATTaGGCATCCCGCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: INEPVNKAPWLCTLISQMAPGSY*ASRPGL
Trigger: CAGACCTGGGCGGGATGCCCAATACGAGCCAGGTGC...CATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCGCCAGACAGGAACCCTaGCACCTGGCTCGTATTGGG +
Preference number: 4 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIARQEP*HLARIG
Trigger: CCCAATACGAGCCAGGTGCCAGGGTTCCTGTCTGGC...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTTGTGCCCTCTGTCTGTaGATCCTGGGAAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSCALCL*ILGRAV
Trigger: AACAGCTCTTCCCAGGATCCACAGACAGAGGGCACA...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGGTGAGCTGCTCTGGTTaGCAGTATTGGCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWVSCSG*QYWQYF
Trigger: GAAGTACTGCCAATACTGCCAACCAGAGCAGCTCAC...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGGGCAGAAGTATCACTTaGAGCCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: QSRRCHLVPSVCGSWEELGRSIT*SQEFKT
Trigger: GGTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCC...CAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGATGAGGTCAGCCGTGTaGATGGTGAGCTGCTTAATT +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVMRSAV*MVSCLI
Trigger: AATTAAGCAGCTCACCATCCACACGGCTGACCTCAT...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGGCTTTAATGAGATTCTaGGTGCTGGAGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWALMRF*VLETDK
Trigger: CTTGTCTGTCTCCAGCACCCAGAATCTCATTAAAGC...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATTCTGTACCTTTGACCTaGACGGTCAGTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDSVPLT*TVSSAW
Trigger: CCAGGCAGAACTGACCGTCCAGGTCAAAGGTACAGA...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS-3UTR CCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGGGCGGGAGGATTGTTTaGGCCCAGGAATTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMGGRIV*AQEFET
Trigger: GGTCTCAAATTCCTGGGCCCAAACAATCCTCCCGCC...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTACCATTCCTGGCTCTGTaGACTCCAAGGATGCCCCCT +
Preference number: 4 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVPFLAL*TPRMPP
Trigger: AGGGGGCATCCTTGGAGTCCACAGAGCCAGGAATGG...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp GACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCCTCTCTGCTCACAGCTaGATAGGAGACATGCCCATT +
Preference number: 4 (lower is better)
Translates to: DAVTLCPLSVDPGKSCSLLSAHS*IGDMPI
Trigger: AATGGGCATGTCTCCTATTCAGCTGTGAGCAGAGAG...GAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR TCA 90 bp GCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTTCATGCTAATGATGTaGTTTATGGTGGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: APVSLPSQSRRCHLVPSVFMLMM*FMVGVL
Trigger: CAAGACCCCCACCATAAATCACATCATTAGCATGAA...GACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCAGCTGCTTGCGGCCTaGATTGCAGCCTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTQLLAA*IAASGD
Trigger: GTCACCAGAGGCTGCAATTCAGGCCGCAAGCAGCTG...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTACTTGTCAGTTGCACTaGGCAGCTGGGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPTCQLH*AAGPPG
Trigger: CCCAGGAGGCCCAGCTGCTCAGTGCAACTGACAAGT...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTACAGGCAGGTGTAGTTaGCTTCATCCTCTACGCGCA +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSTGRCS*LHPLRA
Trigger: TGCGCGTAGAGGATGAAGGCAACTACACCTGCCTGT...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTACGCTCCTGCTGCCCTaGGGGAACGTGACGAACAGG +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSTLLLP*GNVTNR
Trigger: CCTGTTCGTCACGTTCCCGCAGGGCAGCAGGAGCGT...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCACGCTCCTGCTGCCCTaGGGGAACGTGACGAACAGG +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCTLLLP*GNVTNR
Trigger: CCTGTTCGTCACGTTCCCGCAGGGCAGCAGGAGCGT...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACACGCTCCTGCTGCCCTaGGGGAACGTGACGAACAGG +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHTLLLP*GNVTNR
Trigger: CCTGTTCGTCACGTTCCCGCAGGGCAGCAGGAGCGT...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCTTCTCAAAGCTCTCGTaGTCCACCTTGCAGGTCACA +
Preference number: 4 (lower is better)
Translates to: TSWQWGEDSVRGTLEGLSFSKLS*STLQVT
Trigger: TGTGACCTGCAAGGTGGAGCACGAGAGCTTTGAGAA...GCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp GTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAACGGGACATGCCTGAGTaGTCACTGGGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VINEPVNKAPWLCTLISQRDMPE*SLGGPS
Trigger: AGAGGGACCTCCCAGTGAGCACTCAGGCATGTCCCG...TTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGAAGAGCTGTTCTCTCTaGTCACAGCTGAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVKSCSL*SQLNRR
Trigger: TCTCCTATTCAGCTGTGAGCAGAGAGAACAGCTCTT...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGAAGAGCTGTTCTCTCTaGTCACAGCTGAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: QSRRCHLVPSVCGSWEELKSCSL*SQLNRR
Trigger: TCTCCTATTCAGCTGTGAGCAGAGAGAACAGCTCTT...CAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR GCA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCGACGCTGTCACCTTGTaGCCTCTGTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSDAVTL*PLSVDP
Trigger: AGGATCCACAGACAGAGGGCACAAGGTGACAGCGTC...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHGGPRP*QLQSLS
Trigger: GGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCC...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATGCTGTGAGAATCAGGTaGTGCCTATATGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDAVRIR*CLYGST
Trigger: AGTGGAGCCATATAGGCAGCACCTGATTCTCACAGC...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTTGCACTGAGCAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTCTGTGTGGTCTGCTATaGAGTAAAGGCTTAACCTTG +
Preference number: 4 (lower is better)
Translates to: VALSSWASWVLGRIHLGPLCGLL*SKGLTL
Trigger: CAAGGTTAAGCCTTTACTGCATAGCAGACCACACAG...AGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCTGCTTATTTTCTCTTaGAGAGCAGCTCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQLLIFS*RAAQAL
Trigger: CAAAGCTTGAGCTGCTCTGCAAGAGAAAATAAGCAG...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACCGCTCCTCCAGTGCCTaGGGTGGGAAGGGGAATACC +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHRSSSA*GGKGNT
Trigger: GGTATTCCCCTTCCCACCCCAGGCACTGGAGGAGCG...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTCTGGGGCCCTGCGTTTaGTGGAAGACGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSLGPCV*WKTAML
Trigger: CAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAG...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTAGGAACCCTGGCACCTaGCTCGTATTGGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPRNPGT*LVLGIP
Trigger: CGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCT...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTAGGAACCCTGGCACCTaGCTCGTATTGGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPRNPGT*LVLGIP
Trigger: CGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCT...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGTTCTTGCCGTCCACCTaGCTTGAGGGCACCAATATC +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMFLPST*LEGTNI
Trigger: GATATTGGTGCCCTCAAGCCAGGTGGACGGCAAGAA...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAAACGGTCAGTTCTGCCTaGCGAGCTCCTAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLETVSSA*RAPRAL
Trigger: CAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGT...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATTCTGTCTGTGGATCCTaGGAAGAGCTGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDSVCGS*EELFSL
Trigger: CAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGA...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTACCTATATGGCTCCACTaGGAGAGGGCAGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVPIWLH*ERADGS
Trigger: GCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGG...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCTCTGGTTGGCAGTATTaGCAGTACTTCTTGCATGTT +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSSGWQY*QYFLHV
Trigger: AACATGCAAGAAGTACTGCCAATACTGCCAACCAGA...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATGTGAGCTGCTCTGGTTaGCAGTATTGGCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDVSCSG*QYWQYF
Trigger: GAAGTACTGCCAATACTGCCAACCAGAGCAGCTCAC...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTTTACCAAAATTCTCTaGTGGCCCACACCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLPSQSRRCHLVPSVCGSFTKIL*WPTPFC
Trigger: ACAGAAGGGTGTGGGCCACCAGAGAATTTTGGTAAA...GGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCAGCAGCTGGGCCTCCTaGGTCTTGGGTCGCATCCAT +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTSSWAS*VLGRIH
Trigger: ATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCT...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCGTTGCACTGAGCAGCTaGGCCTCCTGGGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTVALSS*ASWVLG
Trigger: ACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCCCCTGCCATCCTGCTaGTTCCTATCTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSPLPSC*FLSLPH
Trigger: GTGGGGAAGAGATAGGAACCAGCAGGATGGCAGGGG...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCGCGTCACCTCCATGTTaGGCACCTGTAGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIASPPC*APVGSR
Trigger: CCTGCTACCTACAGGTGCCCAACATGGAGGTGACGC...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTGCCCTGCGGGAACGTaGCGAACAGGCAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCCPAGT*RTGRCS
Trigger: ACTACACCTGCCTGTTCGTCACGTTCCCGCAGGGCA...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGGGTCTGAGTGCCAGGTaGTTTGGGCTGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWGLSAR*FGLAGD
Trigger: GTCGCCCGCCAGCCCAAATCACCTGGCACTCAGACC...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTGCCGTCCACCTGGCTTaGGGGCACCAATATCCAGAG +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSAVHLA*GHQYPE
Trigger: CTCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGC...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTAGATTAAAGTTGTGTTaGTTGGTTTGTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: CQLQSLSPLSPDAVTLCPRLKLC*LVCPQD
Trigger: GTCCTGTGGACAAACCAATCAACACAACTTTAATCT...AGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp GTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAATGGGAGGTCCCTCTTTaGCCTGGACGGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VINEPVNKAPWLCTLISQWEVPL*PGRSVL
Trigger: CAGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCA...TTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCGACATGCCCATTAGCTaGGGCGCTGGCATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTDMPIS*GAGMLC
Trigger: ACAGAGCATGCCAGCGCCTCAGCTAATGGGCATGTC...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp ACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCTGCTCACAGCTCTCTGCTCACAGCTaGATAGGAGACATGCCCATT +
Preference number: 4 (lower is better)
Translates to: TLCPLSVDPGKSCSLCSQLSAHS*IGDMPI
Trigger: AATGGGCATGTCTCCTATTCAGCTGTGAGCAGAGAG...CTGTGAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR TCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTCTCTCTGCTCACAGCTaGATAGGAGACATGCCCATT +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSLSAHS*IGDMPI
Trigger: AATGGGCATGTCTCCTATTCAGCTGTGAGCAGAGAG...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATCTCTGCCGCGGTCGCTaGGAGTCCAGCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNLCRGR*ESSSRS
Trigger: GCTCCGGGAGCTGGACTCGCAGCGACCGCGGCAGAG...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTCGCGCCCAGTCTGGCTaGCACGAATTCCAGCCGTTT +
Preference number: 4 (lower is better)
Translates to: PALPSLSRANPLSCLFSLRAQSG*HEFQPF
Trigger: AAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCG...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTTTCTCAAAGCTCTCGTaGTCCACCTTGCAGGTCACA +
Preference number: 4 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVFSKLS*STLQVT
Trigger: TGTGACCTGCAAGGTGGAGCACGAGAGCTTTGAGAA...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp TTTGTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCTGGGCTCTGGGTTGCTaGGAGCATCGCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: FVNVINEPVNKAPWLCTLWALGC*EHRRSG
Trigger: CCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCA...GAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTATTGGCAGTACTTCTTaGATGTTGTCACATGTTGCT +
Preference number: 4 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPIGSTS*MLSHVA
Trigger: AGCAACATGTGACAACATGCAAGAAGTACTGCCAAT...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCACACAAAAGACCCCATTaGACACAGCCGCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERAHKRPH*TQPLEV
Trigger: TACCTCCAGCGGCTGTGTGCAATGGGGTCTTTTGTG...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTAGAACTGGGCCTGCATaGTGTGCCCGGAGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSRTGPA*CARSRA
Trigger: GGCTCTACTCCGGGCACAGCATGCAGGCCCAGTTCT...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTAAGAGATGGATACCTCTaGGGGGTAGTACACGGTGAG +
Preference number: 4 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVRDGYL*GVVHGE
Trigger: CTCACCGTGTACTACCCCCCAGAGGTATCCATCTCT...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCATCGCAGGTCAGGGTaGCCTCATTCTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTHRRSG*PHSGQG
Trigger: ACCTTGGCCAGAATGAGGCCACCCTGACCTGCGATG...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGACATCGCAGGTCAGGGTaGCCTCATTCTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRHRRSG*PHSGQG
Trigger: ACCTTGGCCAGAATGAGGCCACCCTGACCTGCGATG...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCA +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPIACGL*VAASIA
Trigger: TGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTAT...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCA +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPIACGL*VAASIA
Trigger: TGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTAT...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTGGTCCCTCTTTGACCTaGACGGTCAGTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPGPSLT*TVSSAW
Trigger: CCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACC...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000187830.2
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTAAGATTAGCCAGACGTaGTGGCACATACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSKISQT*WHIPVV
Trigger: GACTACAGGTATGTGCCACCACGTCTGGCTAATCTT...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTTCCCATTTAGCATCTTaGCCCAAGGTCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSSHLAS*PKVFSP
Trigger: GGGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGA...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCCCCTGCCATCCTGCTaGTTCCTATCTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTPLPSC*FLSLPH
Trigger: GTGGGGAAGAGATAGGAACCAGCAGGATGGCAGGGG...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTCCCCTGCCATCCTGCTaGTTCCTATCTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPPLPSC*FLSLPH
Trigger: GTGGGGAAGAGATAGGAACCAGCAGGATGGCAGGGG...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTATCTCCCCAACTCTGTaGGGTCCCACTGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PALPSLSRANPLSCLFSLISPTL*GPTGLL
Trigger: GAGGAGGCCAGTGGGACCCCACAGAGTTGGGGAGAT...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATAGCCGGGCACCTGGGTaGGCGCCTGCACGACGACGT +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNSRAPG*APARRR
Trigger: ACGTCGTCGTGCAGGCGCCCACCCAGGTGCCCGGCT...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAGCGTCACCTCCATGTTaGGCACCTGTAGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VINEPVNKAPWLCTLISQASPPC*APVGSR
Trigger: CCTGCTACCTACAGGTGCCCAACATGGAGGTGACGC...TTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp GAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAGAAACCTCATGGCAGTaGGGTGAGGATTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: EPVNKAPWLCTLISQMGEETSWQ*GEDSVR
Trigger: TCTCACTGAATCCTCACCCCACTGCCATGAGGTTTC...TTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGTGAGGGGCAGCTGTaGTCACAGCTACTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRGEGQL*SQLLGR
Trigger: CCTACCAAGTAGCTGTGACCACAGCTGCCCCTCACC...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCCTCGGGAGGCTGAGATaGAAGGATAGCCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCLGRLR*KDSPSP
Trigger: TGGGCTCGGGCTATCCTTCCATCTCAGCCTCCCGAG...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CAA 72 bp TTGGTGACGTTGCAGATTAAAGTTGTGTTGATTGGTTaGTCCACAGGACGGATCAGGAGCTGGGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LVTLQIKVVLIG*STGRIRSWAPW
Trigger: CCAGGGCGCCCAGCTCCTGATCCGTCCTGTGGACAAACCAATCAACACAACTTTAATCTGCAACGTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCGGGGGTAGTACACGGTaGGGTTCACAGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCGGSTR*GSQSAA
Trigger: AGCTGCTGACTGTGAACCTCACCGTGTACTACCCCC...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp ACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCCTAGGGCATTGGTaGCGTTGCAGATTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: TSEQGSLALHPHQSNGGNLLGHW*RCRLKL
Trigger: CAACTTTAATCTGCAACGTCACCAATGCCCTAGGAG...GTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGTTCATGCTAATGATGTaGTTTATGGTGGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWFMLMM*FMVGVL
Trigger: CAAGACCCCCACCATAAATCACATCATTAGCATGAA...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTAACCACAGAGATCTaGCGGATACAGAGATTTAGA +
Preference number: 4 (lower is better)
Translates to: SVPTLSPCALCLWILGRAVTTEI*RIQRFR
Trigger: TCTAAATCTCTGTATCCGTCAGATCTCTGTGGTTAC...AGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGAAAGTGGCTGCAGCTaGCAACCTTCTTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSESGCS*QPSSSS
Trigger: TGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTTATAGGAGCGTGTCCTaGGCAACTGCAGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PALPSLSRANPLSCLFSLYRSVS*ATAALP
Trigger: AGGCAGCGCTGCAGTTGCTCAGGACACGCTCCTATA...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTATAGGAGCGTGTCCTaGGCAACTGCAGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCYRSVS*ATAALP
Trigger: AGGCAGCGCTGCAGTTGCTCAGGACACGCTCCTATA...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCATGCTCTGTACCTTTaGCCTGGACGGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSHALYL*PGRSVL
Trigger: CAGAACTGACCGTCCAGGTCAAAGGTACAGAGCATG...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS-3UTR TCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCACTCCTTACCTCAAGTaGTCCACCCGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCTPYLK*STRCSL
Trigger: GAGGCTGCAGCGGGTGGATCACTTGAGGTAAGGAGT...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCGTCAGCTGTGACACATaGGTCACCTCCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTVSCDT*VTSMLG
Trigger: GCCCAACATGGAGGTGACGCATGTGTCACAGCTGAC...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTCTGCCAGATTCACCATaGCGCGCCCAAGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSLPDSP*RAQVSC
Trigger: ACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAG...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCCTGCCAGATTCACCATaGCGCGCCCAAGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VNVINEPVNKAPWLCTLILPDSP*RAQVSC
Trigger: ACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAG...GATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp AAAGGACCTCACGGGAACATTTGGACCAATAGAAATAAATCCCGATCCCCAGCAGGAAGACGGCCATGCTaGCAGATTCACCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: KGPHGNIWTNRNKSRSPAGRRPC*QIHHAA
Trigger: CGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCC...TGCTGGGGATCGGGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp AAAGGACCTCACGGGAACATTTGGACCAATAGAAATAAATCCCGATCCCCAGCACGCGCCCAGTCTGGCTaGCACGAATTCCAGCCGTTT +
Preference number: 4 (lower is better)
Translates to: KGPHGNIWTNRNKSRSPARAQSG*HEFQPF
Trigger: AAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCG...TGCTGGGGATCGGGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGGGAGGCCCACGTCCTTaGCAGCTCCAGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWGGPRP*QLQSLS
Trigger: GGAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCC...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGCCCTTGGAATATCCTaGCTGGTAGCTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERAALGIS*LVADLG
Trigger: TCCAAGATCAGCTACCAGGCAGGATATTCCAAGGGC...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACATTTTCACCCCAAGCAATCTGCAACCCAGAGGCTTCTGGGACCTCACAGCTCGCCCTTGGAATATCCTaGCTGGTAGCTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: TFSPQAICNPEASGTSQLALGIS*LVADLG
Trigger: TCCAAGATCAGCTACCAGGCAGGATATTCCAAGGGC...GAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGAAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATCTGTGTGGTCTGCTATaGAGTAAAGGCTTAACCTTG +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDLCGLL*SKGLTL
Trigger: CAAGGTTAAGCCTTTACTGCATAGCAGACCACACAG...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTAGCGCTGCCTCCCCCTaGATCCCTTCCCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFSAASP*IPSPLC
Trigger: ACACAAGGGGGAAGGGATGCAGGGGGAGGCAGCGCT...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTGCTTATTTTCTCTTaGAGAGCAGCTCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VPTLSPCALCLWILGRAVLLIFS*RAAQAL
Trigger: CAAAGCTTGAGCTGCTCTGCAAGAGAAAATAAGCAG...AACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp CTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCAAATCCTCTGTCCTaGTTATTTTCTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSVPTLSPCALCLWILGRANPLS*LFSLAE
Trigger: CTCTGCAAGAGAAAATAAGCAGGACAGAGGATTTGC...TCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTGAGGCGCTGGCATaGTCTGTACCTTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: PALPSLSRANPLSCLFSLAEALA*SVPLTW
Trigger: CCAGGTCAAAGGTACAGAGCATGCCAGCGCCTCAGC...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS-3UTR GCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATAACTGGATATCCATGTaGAGAAGAATGGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDNWISM*RRMELD
Trigger: GTCCAGCTCCATTCTTCTGCACATGGATATCCAGTT...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTGAGTCCATCCTGTCCTaGAGCCTTCATCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSESILS*SLHLGL
Trigger: GAGGCCCAGATGAAGGCTGCAGGACAGGATGGACTC...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGGGGCCCTGCGTTTGGTaGAAGACGGCCATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWGPCVW*KTAMLP
Trigger: TGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCC...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTCTGTGTTCTGGGGCTTaGCAAGCACTCGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSLCSGA*QALGAR
Trigger: TCTGGCTCCGAGTGCTTGCCAAGCCCCAGAACACAG...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCA +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHIACGL*VAASIA
Trigger: TGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTAT...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCACGGTCAGTTCTGCCTaGCGAGCTCCTAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: VNVINEPVNKAPWLCTLITVSSA*RAPRAL
Trigger: CAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGT...GATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGGGTCGGGTCCAACTCTaGAGGCCCACGTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWGRVQL*RPTSLP
Trigger: TGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACC...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGAGTCTTGGGCCACTCTaGGTGGTTCATGCTAATGAT +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMSLGPL*VVHAND
Trigger: ATCATTAGCATGAACCACCCAGAGTGGCCCAAGACT...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAACTGATCTTGGAGTCTTaGGCCACTCTGGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLELILES*ATLGGS
Trigger: TGAACCACCCAGAGTGGCCCAAGACTCCAAGATCAG...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCGGGTCGCATCCATCTTaGTCCTATAGGAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTGSHPS*SYRSVS
Trigger: GGACACGCTCCTATAGGACCAAGATGGATGCGACCC...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTGGGTCGCATCCATCTTaGTCCTATAGGAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPGSHPS*SYRSVS
Trigger: GGACACGCTCCTATAGGACCAAGATGGATGCGACCC...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGGGGTCTTGGGCCACACGGTATTGGCTTGATGTATGAGGTCAGCCGTGTGGATGCTTTAATGAGATTCTaGGTGCTGGAGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: GGLGPHGIGLMYEVSRVDALMRF*VLETDK
Trigger: CTTGTCTGTCTCCAGCACCCAGAATCTCATTAAAGC...ATCCACACGGCTGACCTCATACATCAAGCCAATACCGTGTGGCCCAAGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAAGCCGGGCACCTGGGTaGGCGCCTGCACGACGACGT +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQSRAPG*APARRR
Trigger: ACGTCGTCGTGCAGGCGCCCACCCAGGTGCCCGGCT...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTAATTTGAGACCAGCCTaGGCAAGATGGCAAGATTCC +
Preference number: 4 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVNLRPA*ARWQDS
Trigger: GGAATCTTGCCATCTTGCCCAGGCTGGTCTCAAATT...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTCCTATACCAAAATTCTaGGCCCACTCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSPIPKF*AHSPFL
Trigger: CAGGAATGGAGAGTGGGCCCAGAATTTTGGTATAGG...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTCAACCCAGAGGCTTCTaGGACCTCACAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPQPRGF*DLTAPQ
Trigger: TTGAGGAGCTGTGAGGTCCCAGAAGCCTCTGGGTTG...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTGCCGTCCACCTGGCTTaGGGGCACCAATATCCAGAG +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFAVHLA*GHQYPE
Trigger: CTCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGC...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp ATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGTTCACAGTCAGCAGCTaGGGCTTCTCAAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: INEPVNKAPWLCTLISQMFTVSS*GFSKLS
Trigger: CGAGAGCTTTGAGAAGCCTCAGCTGCTGACTGTGAA...CATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCACACGGTATTGGCTTaGTGTATGAGGTCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTHTVLA*CMRSAV
Trigger: CACGGCTGACCTCATACATCAAGCCAATACCGTGTG...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTAATTGCAGCCTCTGGTaGCCAGGGTCAGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PALPSLSRANPLSCLFSLNCSLW*PGSVAV
Trigger: AACAGCCACTGACCCTGGTCACCAGAGGCTGCAATT...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AAAGGACCTCACGGGAACATTTGGACCAATAGAAATAAATCCCGATCCCCAGCACTGCCAGATTCACCATaGCGCGCCCAAGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KGPHGNIWTNRNKSRSPALPDSP*RAQVSC
Trigger: ACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAG...TGCTGGGGATCGGGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGGTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp TTTGTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCGGTGGAAGACGGCCATaGTGCCAGATTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: FVNVINEPVNKAPWLCTLGGRRP*CQIHHA
Trigger: GGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACC...GAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCGCGCCCAGTCTGGCTaGCACGAATTCCAGCCGTTT +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWRAQSG*HEFQPF
Trigger: AAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCG...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCACAGGCAGGTGTAGTTaGCTTCATCCTCTACGCGCA +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTTGRCS*LHPLRA
Trigger: TGCGCGTAGAGGATGAAGGCAACTACACCTGCCTGT...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCTGCAGGTCACATTCTTaGCGTCCACCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VNVINEPVNKAPWLCTLICRSHS*RPPGLR
Trigger: CCTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCA...GATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTGCAGGTCACATTCTTaGCGTCCACCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSCRSHS*RPPGLR
Trigger: CCTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCA...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTTCTCGTGCTCCACCTTaGAGGTCACATTCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPSRAPP*RSHSCR
Trigger: ACGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGA...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTTTCTCAAAGCTCTCGTaGTCCACCTTGCAGGTCACA +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSFSKLS*STLQVT
Trigger: TGTGACCTGCAAGGTGGAGCACGAGAGCTTTGAGAA...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTTGTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCTGGCGTTACGGGACATaGCTGAGTGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: FVNVINEPVNKAPWLCTLWRYGT*LSAHWE
Trigger: CTCCCAGTGAGCACTCAGGCATGTCCCGTAACGCCA...GAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR GCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGACGCTGTCACCTTGTaGCCTCTGTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: PALPSLSRANPLSCLFSLDAVTL*PLSVDP
Trigger: AGGATCCACAGACAGAGGGCACAAGGTGACAGCGTC...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCGCTGTGAGAATCAGGTaGTGCCTATATGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIAVRIR*CLYGST
Trigger: AGTGGAGCCATATAGGCAGCACCTGATTCTCACAGC...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAAGCTGTGAGAATCAGGTaGTGCCTATATGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLEAVRIR*CLYGST
Trigger: AGTGGAGCCATATAGGCAGCACCTGATTCTCACAGC...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCTGCTCACACATGTTGTCACATGTTaGTGTGAGAATCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HLVPSVCGSWEELFSLLTHVVTC*CENQVL
Trigger: CAGCACCTGATTCTCACAGCAACATGTGACAACATG...TGTGAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTCCCAGCTTGCTGGCTaGAGATGCTGGCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCSQLAG*RCWQKV
Trigger: CACTTTCTGCCAGCATCTGCAGCCAGCAAGCTGGGA...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTCCCAGCTTGCTGGCTaGAGATGCTGGCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSSQLAG*RCWQKV
Trigger: CACTTTCTGCCAGCATCTGCAGCCAGCAAGCTGGGA...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTCTGCTTATTTTCTCTTaGAGAGCAGCTCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSLLIFS*RAAQAL
Trigger: CAAAGCTTGAGCTGCTCTGCAAGAGAAAATAAGCAG...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCTCTGATAAGGATAGTTaGGGTTTTCTTAACCTTACT +
Preference number: 4 (lower is better)
Translates to: GQMEAVASSVVERVLCTSSDKDS*GFLNLT
Trigger: AGTAAGGTTAAGAAAACCGCAACTATCCTTATCAGA...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTCGAATTCCAGCCGTTTaGACTCCGAATAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSRIPAV*TPNSWG
Trigger: GCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCG...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTTGTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCCTGTGTTCTGGGGCTTaGCAAGCACTCGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FVNVINEPVNKAPWLCTLLCSGA*QALGAR
Trigger: TCTGGCTCCGAGTGCTTGCCAAGCCCCAGAACACAG...GAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTTTCTTGCCGTCCACCTaGCTTGAGGGCACCAATATC +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPFLPST*LEGTNI
Trigger: GATATTGGTGCCCTCAAGCCAGGTGGACGGCAAGAA...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAATTCTTGCCGTCCACCTaGCTTGAGGGCACCAATATC +
Preference number: 4 (lower is better)
Translates to: VINEPVNKAPWLCTLISQFLPST*LEGTNI
Trigger: GATATTGGTGCCCTCAAGCCAGGTGGACGGCAAGAA...TTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTTCTGTCTGTGGATCCTaGGAAGAGCTGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSSVCGS*EELFSL
Trigger: CAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGA...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCACAGGGAGGGAGGCTaGTCTCTTTGGAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWHREGG*SLWRGS
Trigger: AGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTCCTATATGGCTCCACTaGGAGAGGGCAGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: PALPSLSRANPLSCLFSLPIWLH*ERADGS
Trigger: GCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGG...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGGCAGAAGTATCACTTaGAGCCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERAGRSIT*SQEFKT
Trigger: GGTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCC...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCGGCAGAAGTATCACTTaGAGCCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSGRSIT*SQEFKT
Trigger: GGTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCC...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGATGAGGTCAGCCGTGTaGATGGTGAGCTGCTTAATT +
Preference number: 4 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWMRSAV*MVSCLI
Trigger: AATTAAGCAGCTCACCATCCACACGGCTGACCTCAT...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGACTGATCTTGGAGTCTTaGGCCACTCTGGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRLILES*ATLGGS
Trigger: TGAACCACCCAGAGTGGCCCAAGACTCCAAGATCAG...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTCTGATCTTGGAGTCTTaGGCCACTCTGGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPLILES*ATLGGS
Trigger: TGAACCACCCAGAGTGGCCCAAGACTCCAAGATCAG...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGGCTTTAATGAGATTCTaGGTGCTGGAGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMALMRF*VLETDK
Trigger: CTTGTCTGTCTCCAGCACCCAGAATCTCATTAAAGC...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCGACGTCCCCGGTTCCTaGGGGTGGCCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALDVPGS*GWPGQH
Trigger: GTGCTGTCCTGGCCACCCCCAGGAACCGGGGACGTC...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTGGATTGGTTGAGCGGTaGGCGGCGCTGGTGAATGAG +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFGLVER*AALVNE
Trigger: CTCATTCACCAGCGCCGCCCACCGCTCAACCAATCC...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CAA 72 bp TGGACGGTCAGTTCTGCCTGGCGAGCTCCTAGGGCATaGGTGACGTTGCAGATTAAAGTTGTGTTGATTGGT +
Preference number: 4 (lower is better)
Translates to: WTVSSAWRAPRA*VTLQIKVVLIG
Trigger: ACCAATCAACACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CAA 72 bp CACGTGGTGACAGTACACATGAAACCTGTCTGCTCCTaGATTTCCACAAAAGACCCCATTGCACACAGCCGC +
Preference number: 4 (lower is better)
Translates to: HVVTVHMKPVCS*ISTKDPIAHSR
Trigger: GCGGCTGTGTGCAATGGGGTCTTTTGTGGAAATCAAGGAGCAGACAGGTTTCATGTGTACTGTCACCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACCATCCCGCCCAGGTCTaGGTGCCAGGTGATTTGGGC +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINHPAQV*VPGDLG
Trigger: GCCCAAATCACCTGGCACTCAGACCTGGGCGGGATG...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTTCACAGTCAGCAGCTaGGGCTTCTCAAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCFTVSS*GFSKLS
Trigger: CGAGAGCTTTGAGAAGCCTCAGCTGCTGACTGTGAA...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTGACATGCCCATTAGCTaGGGCGCTGGCATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFDMPIS*GAGMLC
Trigger: ACAGAGCATGCCAGCGCCTCAGCTAATGGGCATGTC...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCCTGCCCCCGTCGTTTTaGGGTCTGGCACAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKILPPSF*GLAQGG
Trigger: CCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAG...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTGAGATCGTATCAACCTaGAAAGATTCCCGACTCCCG +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPEIVST*KDSRLP
Trigger: CGGGAGTCGGGAATCTTTTCAGGTTGATACGATCTC...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATGGTGGGCGGCGCTGGTaGATGAGACCGGAAAAGACG +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNGGRRW*MRPEKT
Trigger: CGTCTTTTCCGGTCTCATTCACCAGCGCCGCCCACC...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATACCGCCCAGGTCTGAGTaGCAGGTGATTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIPPRSE*QVIWAG
Trigger: GCCAGCCCAAATCACCTGGCACTCAGACCTGGGCGG...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTCTCGTGCTCCACCTTaGAGGTCACATTCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHSRAPP*RSHSCR
Trigger: ACGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGA...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTGTGTGGATGGTGAGCTaGTTAATTCAGCACTTTGGG +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSVWMVS*LIQHFG
Trigger: CCCAAAGTGCTGAATTAAGCAGCTCACCATCCACAC...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATAAGCGCTGCCTCCCCCTaGATCCCTTCCCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFISAASP*IPSPLC
Trigger: ACACAAGGGGGAAGGGATGCAGGGGGAGGCAGCGCT...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATGAGCAACTGCAGCGCTaGCTCCCCCTGCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNEQLQR*LPLHPF
Trigger: GAAGGGATGCAGGGGGAGGCAGCGCTGCAGTTGCTC...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAAGGAATTCTGCTGTCTaGCCTCAAGATCATAGACCT +
Preference number: 4 (lower is better)
Translates to: TCCCENQVLPIWLHWERARNSAV*PQDHRP
Trigger: AGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCT...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGCAAATCCTCTGTCCTaGTTATTTTCTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RVVLETYELAPAPVVLRSANPLS*LFSLAE
Trigger: CTCTGCAAGAGAAAATAAGCAGGACAGAGGATTTGC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGGCAAATCCTCTGTCCTaGTTATTTTCTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMANPLS*LFSLAE
Trigger: CTCTGCAAGAGAAAATAAGCAGGACAGAGGATTTGC...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCGACAAGGAGCTTACGTaGCACCAAAGCAACCAATGT +
Preference number: 4 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIDKELT*HQSNQC
Trigger: ACATTGGTTGCTTTGGTGGCACGTAAGCTCCTTGTC...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTGGAAAGGATACAAATaGCTGTCCTTAGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIWKGYK*LSLEAS
Trigger: CGAGGCCTCTAAGGACAGGCATTTGTATCCTTTCCA...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTTGGACTCCGAATAGCTaGGGCCCTGCGTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFWTPNS*GPAFGG
Trigger: TCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCA...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTCCAGGTGATTTGGGCTaGCGGGCGACCCCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESPGDLG*RATPCG
Trigger: TCCACAGGGGGTCGCCCGCCAGCCCAAATCACCTGG...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCCCTCACGGGAACATTTaGACCAATAGAAATAAATCC +
Preference number: 4 (lower is better)
Translates to: PVNKAPWLCTLISQMGETPHGNI*TNRNKS
Trigger: GGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGG...GGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTGTGCCCTCTGTCTGTaGATCCTGGGAAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSCALCL*ILGRAV
Trigger: AACAGCTCTTCCCAGGATCCACAGACAGAGGGCACA...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATGGTCGGGTCCAACTCTaGAGGCCCACGTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNGRVQL*RPTSLP
Trigger: TGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACC...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAAAAGATTAGCCAGACGTaGTGGCACATACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLEKISQT*WHIPVV
Trigger: GACTACAGGTATGTGCCACCACGTCTGGCTAATCTT...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTATGAGGTCAGCCGTGTaGATGGTGAGCTGCTTAATT +
Preference number: 4 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSMRSAV*MVSCLI
Trigger: AATTAAGCAGCTCACCATCCACACGGCTGACCTCAT...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAAAGTCTTGGGCCACTCTaGGTGGTTCATGCTAATGAT +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLESLGPL*VVHAND
Trigger: ATCATTAGCATGAACCACCCAGAGTGGCCCAAGACT...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AAAGGACCTCACGGGAACATTTGGACCAATAGAAATAAATCCCGATCCCCAGCAGGGTCGCATCCATCTTaGTCCTATAGGAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: KGPHGNIWTNRNKSRSPAGSHPS*SYRSVS
Trigger: GGACACGCTCCTATAGGACCAAGATGGATGCGACCC...TGCTGGGGATCGGGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTGTAATAGTGAAAGGCTaGAAAGGATACAAATGCCTG +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSVIVKG*KGYKCL
Trigger: CAGGCATTTGTATCCTTTCCAGCCTTTCACTATTAC...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CAA 72 bp CCTAGGGCATTGGTGACGTTGCAGATTAAAGTTGTGTaGATTGGTTTGTCCACAGGACGGATCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRALVTLQIKVV*IGLSTGRIRSW
Trigger: CCAGCTCCTGATCCGTCCTGTGGACAAACCAATCAACACAACTTTAATCTGCAACGTCACCAATGCCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR TCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCCATCCCGCCCAGGTCTaGGTGCCAGGTGATTTGGGC +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKIHPAQV*VPGDLG
Trigger: GCCCAAATCACCTGGCACTCAGACCTGGGCGGGATG...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GAAACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGATTAAAGTTGTGTTaGTTGGTTTGTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: ETSWQWGEDSVRGTLEGLRLKLC*LVCPQD
Trigger: GTCCTGTGGACAAACCAATCAACACAACTTTAATCT...GAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGCACTCCAGCCTGGGTaGCAGGAGACACCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQALQPG*QETPSL
Trigger: AAGGGACGGTGTCTCCTGTCACCCAGGCTGGAGTGC...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACCCCTCCCATGGAATATaGGGTGGGTGTAGAACAACT +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHPSHGI*GGCRTT
Trigger: AGTTGTTCTACACCCACCTCATATTCCATGGGAGGG...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACGGAAGACGGCCATGCTaGCAGATTCACCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINGRRPC*QIHHAA
Trigger: CGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCC...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATCGCGCCCAGTCTGGCTaGCACGAATTCCAGCCGTTT +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNRAQSG*HEFQPF
Trigger: AAACGGCTGGAATTCGTGGCAGCCAGACTGGGCGCG...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTTCTCAAAGCTCTCGTaGTCCACCTTGCAGGTCACA +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCFSKLS*STLQVT
Trigger: TGTGACCTGCAAGGTGGAGCACGAGAGCTTTGAGAA...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAATGGGCTCTGGGTTGCTaGGAGCATCGCAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQWALGC*EHRRSG
Trigger: CCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCA...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCAGATGATTGGCAGTACTTCTTaGATGTTGTCACATGTTGCT +
Preference number: 4 (lower is better)
Translates to: VAVRIRCCLYGSTGRGQMIGSTS*MLSHVA
Trigger: AGCAACATGTGACAACATGCAAGAAGTACTGCCAAT...CATCTGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTGACAAGGAGCTTACGTaGCACCAAAGCAACCAATGT +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPDKELT*HQSNQC
Trigger: ACATTGGTTGCTTTGGTGGCACGTAAGCTCCTTGTC...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTCCTCACGGGAACATTTaGACCAATAGAAATAAATCC +
Preference number: 4 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVPHGNI*TNRNKS
Trigger: GGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGG...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTGTGAGCTGCTCTGGTTaGCAGTATTGGCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSVSCSG*QYWQYF
Trigger: GAAGTACTGCCAATACTGCCAACCAGAGCAGCTCAC...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTAAGATTAGCCAGACGTaGTGGCACATACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPKISQT*WHIPVV
Trigger: GACTACAGGTATGTGCCACCACGTCTGGCTAATCTT...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTAGTCTTGGGCCACTCTaGGTGGTTCATGCTAATGAT +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPSLGPL*VVHAND
Trigger: ATCATTAGCATGAACCACCCAGAGTGGCCCAAGACT...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGATCATCTCTAAGCCCTTaGAATATCCTGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRSSLSP*NILPGS
Trigger: GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGA...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATTTACCAAAATTCTCTaGTGGCCCACACCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLEFTKIL*WPTPFC
Trigger: ACAGAAGGGTGTGGGCCACCAGAGAATTTTGGTAAA...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCGAATCCCAGCCCTTATaGCCCTCTTCATTTAGCGTC +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCESQPL*PSSFSV
Trigger: GACGCTAAATGAAGAGGGCCATAAGGGCTGGGATTC...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTGAGTGTATGATTCAGTaGCATTCATTACATTCACAG +
Preference number: 4 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSECMIQ*HSLHSQ
Trigger: CTGTGAATGTAATGAATGCCACTGAATCATACACTC...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTCATCGCCTACGTCGCTaGTGGGAACAGAACTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFHRLRR*WEQNSA
Trigger: TGCTGAGTTCTGTTCCCACCAGCGACGTAGGCGATG...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTCTTGTCACCCAGGCTaGAGTGCAGTAACTCGATCA +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHSCHPG*SAVTRS
Trigger: TGATCGAGTTACTGCACTCCAGCCTGGGTGACAAGA...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCGGTGATGCCAATATGTaGAGGAAAGCAGAACAAACA +
Preference number: 4 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSGDANM*RKAEQT
Trigger: TGTTTGTTCTGCTTTCCTCCACATATTGGCATCACC...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CAA 72 bp AGTTCTGCCTGGCGAGCTCCTAGGGCATTGGTGACGTaGCAGATTAAAGTTGTGTTGATTGGTTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SSAWRAPRALVT*QIKVVLIGLST
Trigger: TGTGGACAAACCAATCAACACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
3UTR CAA 72 bp GTGAGCTGCTCTGGTTGGCAGTATTGGCAGTACTTCTaGCATGTTGTCACATGTTGCTGTGAGAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSCSGWQYWQYF*HVVTCCCENQV
Trigger: CACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTACTGCCAATACTGCCAACCAGAGCAGCTCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 72 bp CTTCTGTGTGGTCTGCTATGCAGTAAAGGCTTAACCTaGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLCGLLCSKGLT*PKERSGPLSSA
Trigger: AGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACACAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATGGGGGTAGTACACGGTaGGGTTCACAGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNGGSTR*GSQSAA
Trigger: AGCTGCTGACTGTGAACCTCACCGTGTACTACCCCC...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp ACATTTTCACCCCAAGCAATCTGCAACCCAGAGGCTTCTGGGACCTCACAGCTCAGATTAAAGTTGTGTTaGTTGGTTTGTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: TFSPQAICNPEASGTSQLRLKLC*LVCPQD
Trigger: GTCCTGTGGACAAACCAATCAACACAACTTTAATCT...GAGCTGTGAGGTCCCAGAAGCCTCTGGGTTGCAGATTGCTTGGGGTGAAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR TCA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATAGACATGCCCATTAGCTaGGGCGCTGGCATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIDMPIS*GAGMLC
Trigger: ACAGAGCATGCCAGCGCCTCAGCTAATGGGCATGTC...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCGTAACCACAGAGATCTaGCGGATACAGAGATTTAGA +
Preference number: 4 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIVTTEI*RIQRFR
Trigger: TCTAAATCTCTGTATCCGTCAGATCTCTGTGGTTAC...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTCAGCTGCTTGCGGCCTaGATTGCAGCCTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESQLLAA*IAASGD
Trigger: GTCACCAGAGGCTGCAATTCAGGCCGCAAGCAGCTG...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCGAAAGTGGCTGCAGCTaGCAACCTTCTTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCESGCS*QPSSSS
Trigger: TGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTC...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACGGCTGCAATGAGCCATaGTCACGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINGCNEP*SRHCTP
Trigger: TGGAGTGCAGTGGCGTGATCATGGCTCATTGCAGCC...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTCTGTGGGCTCTGGGTTaGTGCGAGCATCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESLWALG*CEHRRS
Trigger: TGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAG...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCCTGGCGAGCTCCTAGGGCATTGGTGACGTTGCAGATTAAAGTTGTGTTGATTAAGAGCTGTTCTCTCTaGTCACAGCTGAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: AWRAPRALVTLQIKVVLIKSCSL*SQLNRR
Trigger: TCTCCTATTCAGCTGTGAGCAGAGAGAACAGCTCTT...AATCAACACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR GCA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTCATGTTGTCACATGTTaGTGTGAGAATCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPHVVTC*CENQVL
Trigger: CAGCACCTGATTCTCACAGCAACATGTGACAACATG...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTGGCAGAAAGTGGCTaGAGATGCTGGCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWLAESG*RCWQKV
Trigger: CACTTTCTGCCAGCATCTGCAGCCACTTTCTGCCAG...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTTTGTGGGTTATTTCCTaGCAGTCCCAGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFLWVIS*QSQLAG
Trigger: GCCAGCAAGCTGGGACTGGCAGGAAATAACCCACAA...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGTTGTGGGTTATTTCCTaGCAGTCCCAGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWLWVIS*QSQLAG
Trigger: GCCAGCAAGCTGGGACTGGCAGGAAATAACCCACAA...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAAGGAATTCTGCTGTCTaGCCTCAAGATCATAGACCT +
Preference number: 4 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRRNSAV*PQDHRP
Trigger: AGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCT...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTGACAAGGAGCTTACGTaGCACCAAAGCAACCAATGT +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSDKELT*HQSNQC
Trigger: ACATTGGTTGCTTTGGTGGCACGTAAGCTCCTTGTC...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTCTGGGGCCCTGCGTTTaGTGGAAGACGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFLGPCV*WKTAML
Trigger: CAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAG...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACTGGACTCCGAATAGCTaGGGCCCTGCGTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINWTPNS*GPAFGG
Trigger: TCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCA...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATACCTCAGCTGTGTTCTaGGGCTTGGCAAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNTSAVF*GLASTR
Trigger: CCGAGTGCTTGCCAAGCCCCAGAACACAGCTGAGGT...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAAGGAACCCTGGCACCTaGCTCGTATTGGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQRNPGT*LVLGIP
Trigger: CGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCT...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCGCCAGACAGGAACCCTaGCACCTGGCTCGTATTGGG +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALARQEP*HLARIG
Trigger: CCCAATACGAGCCAGGTGCCAGGGTTCCTGTCTGGC...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTGCCAGACAGGAACCCTaGCACCTGGCTCGTATTGGG +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESARQEP*HLARIG
Trigger: CCCAATACGAGCCAGGTGCCAGGGTTCCTGTCTGGC...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATAATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCA +
Preference number: 4 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIIACGL*VAASIA
Trigger: TGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTAT...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTCACAGGGAGGGAGGCTaGTCTCTTTGGAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESHREGG*SLWRGS
Trigger: AGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCCACAGGGAGGGAGGCTaGTCTCTTTGGAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALHREGG*SLWRGS
Trigger: AGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTATTAGCCAGACGTGGTaGCACATACCTGTAGTCATA +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPISQTW*HIPVVI
Trigger: TATGACTACAGGTATGTGCCACCACGTCTGGCTAAT...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCATTAGCCAGACGTGGTaGCACATACCTGTAGTCATA +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTISQTW*HIPVVI
Trigger: TATGACTACAGGTATGTGCCACCACGTCTGGCTAAT...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTATGAGGTCAGCCGTGTaGATGGTGAGCTGCTTAATT +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSMRSAV*MVSCLI
Trigger: AATTAAGCAGCTCACCATCCACACGGCTGACCTCAT...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTCATCTCTAAGCCCTTaGAATATCCTGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSSSLSP*NILPGS
Trigger: GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGA...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTTTTACCAAAATTCTCTaGTGGCCCACACCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPFTKIL*WPTPFC
Trigger: ACAGAAGGGTGTGGGCCACCAGAGAATTTTGGTAAA...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTAGCAGCTGGGCCTCCTaGGTCTTGGGTCGCATCCAT +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESSSWAS*VLGRIH
Trigger: ATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCT...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCGTTGCACTGAGCAGCTaGGCCTCCTGGGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALVALSS*ASWVLG
Trigger: ACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACCCCCTGCCATCCTGCTaGTTCCTATCTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINPLPSC*FLSLPH
Trigger: GTGGGGAAGAGATAGGAACCAGCAGGATGGCAGGGG...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTATCTCCCCAACTCTGTaGGGTCCCACTGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESISPTL*GPTGLL
Trigger: GAGGAGGCCAGTGGGACCCCACAGAGTTGGGGAGAT...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTTGTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCCCCTCATCAGTCAAATaGGGGAAACCTCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: FVNVINEPVNKAPWLCTLPSSVK*GKPHGS
Trigger: ACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGG...GAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR TCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCCGCCCAAGTCAGCTGTaGCACATGCGTCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKIRPSQL*HMRHLH
Trigger: ATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCG...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATAGTGAGCTGGACCTTCTaGACCTCAGCTGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIVSWTF*TSAVFW
Trigger: CCAGAACACAGCTGAGGTTCAGAAGGTCCAGCTCAC...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTGACATGCCCATTAGCTaGGGCGCTGGCATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESDMPIS*GAGMLC
Trigger: ACAGAGCATGCCAGCGCCTCAGCTAATGGGCATGTC...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCTTCATGCTAATGATGTaGTTTATGGTGGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTFMLMM*FMVGVL
Trigger: CAAGACCCCCACCATAAATCACATCATTAGCATGAA...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACAATTGCAGCCTCTGGTaGCCAGGGTCAGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINNCSLW*PGSVAV
Trigger: AACAGCCACTGACCCTGGTCACCAGAGGCTGCAATT...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTGCAGGTCACATTCTTaGCGTCCACCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNCRSHS*RPPGLR
Trigger: CCTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCA...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCTGGCGTTACGGGACATaGCTGAGTGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKIWRYGT*LSAHWE
Trigger: CTCCCAGTGAGCACTCAGGCATGTCCCGTAACGCCA...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000425690.8
CDS-3UTR GCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTTGGCGTTACGGGACATaGCTGAGTGCTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESWRYGT*LSAHWE
Trigger: CTCCCAGTGAGCACTCAGGCATGTCCCGTAACGCCA...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000425690.8
CDS-3UTR GCA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACCATGTTGTCACATGTTaGTGTGAGAATCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHHVVTC*CENQVL
Trigger: CAGCACCTGATTCTCACAGCAACATGTGACAACATG...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATACGAATTCCAGCCGTTTaGACTCCGAATAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIRIPAV*TPNSWG
Trigger: GCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCG...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAACCTCAGCTGTGTTCTaGGGCTTGGCAAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQTSAVF*GLASTR
Trigger: CCGAGTGCTTGCCAAGCCCCAGAACACAGCTGAGGT...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTACCTCAGCTGTGTTCTaGGGCTTGGCAAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESTSAVF*GLASTR
Trigger: CCGAGTGCTTGCCAAGCCCCAGAACACAGCTGAGGT...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTAGGAACCCTGGCACCTaGCTCGTATTGGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFRNPGT*LVLGIP
Trigger: CGGGATGCCCAATACGAGCCAGGTGCCAGGGTTCCT...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTACGGTCAGTTCTGCCTaGCGAGCTCCTAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESTVSSA*RAPRAL
Trigger: CAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGT...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAACCTCACGGGAACATTTaGACCAATAGAAATAAATCC +
Preference number: 4 (lower is better)
Translates to: KIGPFILSSWAFISKPLEPHGNI*TNRNKS
Trigger: GGATTTATTTCTATTGGTCCAAATGTTCCCGTGAGG...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATACCTATATGGCTCCACTaGGAGAGGGCAGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIPIWLH*ERADGS
Trigger: GCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGG...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCGCTTTAATGAGATTCTaGGTGCTGGAGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCALMRF*VLETDK
Trigger: CTTGTCTGTCTCCAGCACCCAGAATCTCATTAAAGC...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGCGTCACCTCCATGTTaGGCACCTGTAGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQASPPC*APVGSR
Trigger: CCTGCTACCTACAGGTGCCCAACATGGAGGTGACGC...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 72 bp ACAAAGATCTCGAGTGAGCTGCTCTGGTTGGCAGTATaGGCAGTACTTCTTGCATGTTGTCACATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TKISSELLWLAV*AVLLACCHMLL
Trigger: CAGCAACATGTGACAACATGCAAGAAGTACTGCCAATACTGCCAACCAGAGCAGCTCACTCGAGATCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
3UTR CAA 72 bp GTCCTGCTTATTTTCTCTTGCAGAGCAGCTCAAGCTTaGCATTCCCATTTAGCATCTTGGCCCAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VLLIFSCRAAQA*HSHLASWPKVF
Trigger: GAAGACCTTGGGCCAAGATGCTAAATGGGAATGCAAAGCTTGAGCTGCTCTGCAAGAGAAAATAAGCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTGCACTGGCTCTCCAGTaGGCTGGACCTTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFALALQ*AGPSEP
Trigger: AGGTTCAGAAGGTCCAGCTCACTGGAGAGCCAGTGC...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTGTCAGCTGTGACACATaGGTCACCTCCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESVSCDT*VTSMLG
Trigger: GCCCAACATGGAGGTGACGCATGTGTCACAGCTGAC...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTGGTGGAAGACGGCCATaGTGCCAGATTCACCATGCC +
Preference number: 4 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFGGRRP*CQIHHA
Trigger: GGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACC...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAATGCAGGTCACATTCTTaGCGTCCACCTGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQCRSHS*RPPGLR
Trigger: CCTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCA...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACTCTCGTGCTCCACCTTaGAGGTCACATTCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINSRAPP*RSHSCR
Trigger: ACGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGA...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTATTGGCAGTACTTCTTaGATGTTGTCACATGTTGCT +
Preference number: 4 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPIGSTS*MLSHVA
Trigger: AGCAACATGTGACAACATGCAAGAAGTACTGCCAAT...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGGTGTGGATGGTGAGCTaGTTAATTCAGCACTTTGGG +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWVWMVS*LIQHFG
Trigger: CCCAAAGTGCTGAATTAAGCAGCTCACCATCCACAC...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCCTGCTTATTTTCTCTTaGAGAGCAGCTCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCLLIFS*RAAQAL
Trigger: CAAAGCTTGAGCTGCTCTGCAAGAGAAAATAAGCAG...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGGACAAGGAGCTTACGTaGCACCAAAGCAACCAATGT +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWDKELT*HQSNQC
Trigger: ACATTGGTTGCTTTGGTGGCACGTAAGCTCCTTGTC...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCCGAATTCCAGCCGTTTaGACTCCGAATAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKIRIPAV*TPNSWG
Trigger: GCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCG...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACTGTGCCCTCTGTCTGTaGATCCTGGGAAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINCALCL*ILGRAV
Trigger: AACAGCTCTTCCCAGGATCCACAGACAGAGGGCACA...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAACCTATATGGCTCCACTaGGAGAGGGCAGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQPIWLH*ERADGS
Trigger: GCTTCCATCTGCCCTCTCCCAGTGGAGCCATATAGG...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTCTGGTTGGCAGTATTaGCAGTACTTCTTGCATGTT +
Preference number: 4 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSSGWQY*QYFLHV
Trigger: AACATGCAAGAAGTACTGCCAATACTGCCAACCAGA...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGGGCAGAAGTATCACTTaGAGCCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWGRSIT*SQEFKT
Trigger: GGTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCC...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCCATGTGCAGAAGAATaGAGCTGGACCATTACACTC +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWPCAEE*SWTITL
Trigger: GAGTGTAATGGTCCAGCTCCATTCTTCTGCACATGG...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCCGCCTACGTCGCTGGTaGGAACAGAACTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALRLRRW*EQNSAQ
Trigger: TTGTGCTGAGTTCTGTTCCCACCAGCGACGTAGGCG...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTAGCCTTCTGAGTAGCTaGGATTACAAGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFSLLSS*DYKHAP
Trigger: TGGTGCATGCTTGTAATCCCAGCTACTCAGAAGGCT...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTACAGGCAGGTGTAGTTaGCTTCATCCTCTACGCGCA +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESTGRCS*LHPLRA
Trigger: TGCGCGTAGAGGATGAAGGCAACTACACCTGCCTGT...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCATGTTGTCACATGTTaGTGTGAGAATCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWHVVTC*CENQVL
Trigger: CAGCACCTGATTCTCACAGCAACATGTGACAACATG...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGAGGAATTCTGCTGTCTaGCCTCAAGATCATAGACCT +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWRNSAV*PQDHRP
Trigger: AGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCT...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCTGTGGACTCCAAGGATaGCCCCTCCCTCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKICGLQG*PLPPEK
Trigger: TTTTTCTGGAGGGAGGGGGCATCCTTGGAGTCCACA...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTTTCTTGCCGTCCACCTaGCTTGAGGGCACCAATATC +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESFLPST*LEGTNI
Trigger: GATATTGGTGCCCTCAAGCCAGGTGGACGGCAAGAA...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCAGAGATGGATACCTCTaGGGGGTAGTACACGGTGAG +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKIRDGYL*GVVHGE
Trigger: CTCACCGTGTACTACCCCCCAGAGGTATCCATCTCT...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAATGTGCCCTCTGTCTGTaGATCCTGGGAAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQCALCL*ILGRAV
Trigger: AACAGCTCTTCCCAGGATCCACAGACAGAGGGCACA...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGATTAGCCAGACGTGGTaGCACATACCTGTAGTCATA +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWISQTW*HIPVVI
Trigger: TATGACTACAGGTATGTGCCACCACGTCTGGCTAAT...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTGGGTCGCATCCATCTTaGTCCTATAGGAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFGSHPS*SYRSVS
Trigger: GGACACGCTCCTATAGGACCAAGATGGATGCGACCC...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTTTCACAGTCAGCAGCTaGGGCTTCTCAAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFFTVSS*GFSKLS
Trigger: CGAGAGCTTTGAGAAGCCTCAGCTGCTGACTGTGAA...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATCTCCTAGGGCATTGGTaGCGTTGCAGATTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNLLGHW*RCRLKL
Trigger: CAACTTTAATCTGCAACGTCACCAATGCCCTAGGAG...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACAACCTGTCTGCTCCTTaGTTTCCACAAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINNLSAP*FPQKTP
Trigger: TGGGGTCTTTTGTGGAAATCAAGGAGCAGACAGGTT...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTTTCTTGCCGTCCACCTaGCTTGAGGGCACCAATATC +
Preference number: 4 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFFLPST*LEGTNI
Trigger: GATATTGGTGCCCTCAAGCCAGGTGGACGGCAAGAA...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCTCTGTCTGTGGATCCTaGGAAGAGCTGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALSVCGS*EELFSL
Trigger: CAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGA...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGTCTGGTTGGCAGTATTaGCAGTACTTCTTGCATGTT +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWSGWQY*QYFLHV
Trigger: AACATGCAAGAAGTACTGCCAATACTGCCAACCAGA...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTTCCCATTTAGCATCTTaGCCCAAGGTCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESSHLAS*PKVFSP
Trigger: GGGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGA...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTAGATTAAAGTTGTGTTaGTTGGTTTGTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFRLKLC*LVCPQD
Trigger: GTCCTGTGGACAAACCAATCAACACAACTTTAATCT...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGAGATTAAAGTTGTGTTaGTTGGTTTGTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWRLKLC*LVCPQD
Trigger: GTCCTGTGGACAAACCAATCAACACAACTTTAATCT...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCCTCCTAGGGCATTGGTaGCGTTGCAGATTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALLLGHW*RCRLKL
Trigger: CAACTTTAATCTGCAACGTCACCAATGCCCTAGGAG...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGAAAGTGGCTGCAGCTaGCAACCTTCTTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQESGCS*QPSSSS
Trigger: TGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTC...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATCTGTGTGGTCTGCTATaGAGTAAAGGCTTAACCTTG +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNLCGLL*SKGLTL
Trigger: CAAGGTTAAGCCTTTACTGCATAGCAGACCACACAG...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATAATTAGCCAGACGTGGTaGCACATACCTGTAGTCATA +
Preference number: 4 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIISQTW*HIPVVI
Trigger: TATGACTACAGGTATGTGCCACCACGTCTGGCTAAT...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATTAGCCAGACGTaGTGGCACATACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALKISQT*WHIPVV
Trigger: GACTACAGGTATGTGCCACCACGTCTGGCTAATCTT...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTAGTCTTGGGCCACTCTaGGTGGTTCATGCTAATGAT +
Preference number: 4 (lower is better)
Translates to: CPFTVINCNCEPNSFPESSLGPL*VVHAND
Trigger: ATCATTAGCATGAACCACCCAGAGTGGCCCAAGACT...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCTCATCTCTAAGCCCTTaGAATATCCTGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKISSLSP*NILPGS
Trigger: GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGA...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACGCAGAAGAATGGAGCTaGACCATTACACTCCAAACA +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINAEEWS*TITLQT
Trigger: TGTTTGGAGTGTAATGGTCCAGCTCCATTCTTCTGC...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CCA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACAAGAAACATACTCTTTaGCCCAGCAATTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CAPPPFADLNLCPFTVINKKHTL*PSNSTS
Trigger: GGAGGTGGAATTGCTGGGCCAAAGAGTATGTTTCTT...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGAGCTGTTCTCTCTaGTCACAGCTGAATAGGAGA +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALKSCSL*SQLNRR
Trigger: TCTCCTATTCAGCTGTGAGCAGAGAGAACAGCTCTT...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCTTCATGCTAATGATGTaGTTTATGGTGGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKIFMLMM*FMVGVL
Trigger: CAAGACCCCCACCATAAATCACATCATTAGCATGAA...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCGTAACCACAGAGATCTaGCGGATACAGAGATTTAGA +
Preference number: 4 (lower is better)
Translates to: FSQTVFFIRGILLSALKIVTTEI*RIQRFR
Trigger: TCTAAATCTCTGTATCCGTCAGATCTCTGTGGTTAC...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR TCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCGTAACCACAGAGATCTaGCGGATACAGAGATTTAGA +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALVTTEI*RIQRFR
Trigger: TCTAAATCTCTGTATCCGTCAGATCTCTGTGGTTAC...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATATTGGCAGTACTTCTTaGATGTTGTCACATGTTGCT +
Preference number: 4 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNIGSTS*MLSHVA
Trigger: AGCAACATGTGACAACATGCAAGAAGTACTGCCAAT...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CCA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCTCTGGTTGGCAGTATTaGCAGTACTTCTTGCATGTT +
Preference number: 4 (lower is better)
Translates to: NVFSQTVFFIRGILLSALSGWQY*QYFLHV
Trigger: AACATGCAAGAAGTACTGCCAATACTGCCAACCAGA...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR GCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAACACATGAAACCTGTCTaGTCCTTGATTTCCACAAAA +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQHMKPV*SLISTK
Trigger: TTTTGTGGAAATCAAGGAGCAGACAGGTTTCATGTG...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
3UTR CAA 72 bp GGAACAGAACTCAGCACAACTTCTGTGAGGGTTCATTaGTCAATATCTATCACAATGACAAGAAACATACTC +
Preference number: 4 (lower is better)
Translates to: GTELSTTSVRVH*SISITMTRNIL
Trigger: GAGTATGTTTCTTGTCATTGTGATAGATATTGACAAATGAACCCTCACAGAAGTTGTGCTGAGTTCTGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR GCA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAAGAGTCAAGGTTTATTaGAGAACTTGTAGACAGTAC +
Preference number: 4 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQRVKVY*RTCRQY
Trigger: GTACTGTCTACAAGTTCTGCAATAAACCTTGACTCT...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS CCA 90 bp CACGCGGCGGCCATGGCTCGGGCCATGCCAGTTGCTCCGAGCAGCTaGGCCTCCCGCGGGCGTCTCCTCGCTTCCCGGCGCCCGCTCGCT +
Preference number: 5 (lower is better)
Translates to: HAAAMARAMPVAPSS*ASRGRLLASRRPLA
Trigger: AGCGAGCGGGCGCCGGGAAGCGAGGAGACGCCCGCGGGAGGCCCAGCTGCTCGGAGCAACTGGCATGGCCCGAGCCATGGCCGCCGCGTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGGCTGGGGCCCTGCGTTaGGTGGAAGACGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQAGALR*VEDGHA
Trigger: AGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGC...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTCCTGTGGGCTCTGGGTaGCTGCGAGCATCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPPVGSG*LRASQV
Trigger: GACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGG...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCCTGTGGGCTCTGGGTaGCTGCGAGCATCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQPVGSG*LRASQV
Trigger: GACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGG...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGGAGGCCCACGTCCTaGCCAGCTCCAGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ASSSLSPLSVPTLSPCALWRPTS*PAPVSL
Trigger: GAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCA...GAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CAA 90 bp CACAGGGAGGGAGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGCCTGCCCCCGTCGTTTaGAGGTCTGGCACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: HREGGWSLWRGSSSIGVGPAPVV*RSGTGR
Trigger: CCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGG...CCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCTCCCTCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS TCA 90 bp GACGGCCATGCTGCCAGATTCACCATGCCGCGCCCAAGTCAGCTGTaGCACATGCGTCACCTCCATGTTGGGCACCGGTTCCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: DGHAARFTMPRPSQL*HMRHLHVGHRFLGV
Trigger: CACCCCCAGGAACCGGTGCCCAACATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAGCATGGCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp GAGTGCTCACTGGGAGGTCCCTCTTTGACCTGGACGGTCAGTTCTGCCTGGCGACCTGTGGGCTCTGGGTaGCTGCGAGCATCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: ECSLGGPSLTWTVSSAWRPVGSG*LRASQV
Trigger: GACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGG...TCGCCAGGCAGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCAGTGAGCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp CAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGCCTGTGGGCTCTGGGTaGCTGCGAGCATCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: QSRRCHLVPSVCGSWEELPVGSG*LRASQV
Trigger: GACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGG...CAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CAA 90 bp CAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTGGAGGCCCACGTCCTaGCCAGCTCCAGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QLQSLSPLSPDAVTLCPLWRPTS*PAPVSL
Trigger: GAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCA...CAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CAA 90 bp CAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGCCCCCAGGCAGCTGCTaGCGGCCTGAATTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QSRRCHLVPSVCGSWEELPPGSC*RPELQP
Trigger: AGGCTGCAATTCAGGCCGCAAGCAGCTGCCTGGGGG...CAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS CCA 90 bp CATGCCGCGCCCAAGTCAGCTGTGACACATGCGTCACCTCCATGTTaGGCACCTGTAGGTAGCAGGGCAGCGTCACGGAGTCGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: HAAPKSAVTHASPPC*APVGSRAASRSRPR
Trigger: TCTTGGGCGACTCCGTGACGCTGCCCTGCTACCTACAGGTGCCCAACATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCGCGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGGCTGGGGCCCTGCGTTaGGTGGAAGACGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: APWLCTLISQMGETSWQWAGALR*VEDGHA
Trigger: AGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGC...CCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGCCCGACGCTGTCACCTaGTGCCCTCTGTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWPDAVT*CPLSVD
Trigger: ATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGG...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTCCTGCCCCCGTCGTTTaGAGGTCTGGCACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: SVPTLSPCALCLWILGRAPAPVV*RSGTGR
Trigger: CCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGG...AGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp CTTGCCAGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCTGGGCCTCCTGGGTCTaGGGTCGCATCCATCTTGGT +
Preference number: 5 (lower is better)
Translates to: LASSSLSPLSVPTLSPCAWASWV*GRIHLG
Trigger: ACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCA...GGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCTGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS GCA 90 bp GGGCCCTGCGTTTGGTGGAAGACGGCCATGCTGCCAGATTCACCATaGCGCGCCCAAGTCAGCTGTGACACATGCGTCACCTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: GPCVWWKTAMLPDSP*RAQVSCDTCVTSML
Trigger: CAACATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS GCA 90 bp ACTCCGAATAGCTGGGGCCCTGCGTTTGGTGGAAGACGGCCATGCTaGCAGATTCACCATGCCGCGCCCAAGTCAGCTGTGACACATGCG +
Preference number: 5 (lower is better)
Translates to: TPNSWGPAFGGRRPC*QIHHAAPKSAVTHA
Trigger: CGCATGTGTCACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGCTATTCGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS CCA 90 bp GCGCTGGCATGCTCTGTACGTGCTCCAATTATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCAGGTCAGGGTGGCCTCATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: ALACSVRAPIIACGL*VAASIAGQGGLILA
Trigger: GGCCAGAATGAGGCCACCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTATAATTGGAGCACGTACAGAGCATGCCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587785.1
CDS-3UTR CAA 90 bp TGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCGTCCACCTGGCTaGAGGGCACCAATATCCAGA +
Preference number: 5 (lower is better)
Translates to: WRGSSSIGVGSNSGGPRPCRPPG*RAPISR
Trigger: TCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGCA...AGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCTGCCGTCCACCTGGCTaGAGGGCACCAATATCCAGA +
Preference number: 5 (lower is better)
Translates to: GQMEAVASSVVERVLCTSCRPPG*RAPISR
Trigger: TCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGCA...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGCTCTCGTGCTCCACCTaGCAGGTCACATTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: SPLSPDAVTLCPLSVDPGLSCST*QVTFLP
Trigger: CGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGAG...CCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGCTCTCGTGCTCCACCTaGCAGGTCACATTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWLSCST*QVTFLP
Trigger: CGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGAG...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCTCTCGTGCTCCACCTaGCAGGTCACATTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQLSCST*QVTFLP
Trigger: CGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGAG...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCCCGTACCTGTGGGCTCTGGGTaGCTGCGAGCATCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: WGEDSVRGTLEGLSTEPVPVGSG*LRASQV
Trigger: GACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGG...TACGGGCTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp TCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGCCCGACGCTGTCACCTaGTGCCCTCTGTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: SSLSPLSVPTLSPCALCLPDAVT*CPLSVD
Trigger: ATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGG...CAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS-3UTR CAA 90 bp AGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCCCGACGCTGTCACCTaGTGCCCTCTGTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: SSSLSPLSVPTLSPCALCPDAVT*CPLSVD
Trigger: ATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGG...ACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000187830.2
ENST00000587785.1
CDS GCA 90 bp TGGACTCCGAATAGCTGGGGCCCTGCGTTTGGTGGAAGACGGCCATaGTGCCAGATTCACCATGCCGCGCCCAAGTCAGCTGTGACACAT +
Preference number: 5 (lower is better)
Translates to: WTPNSWGPAFGGRRP*CQIHHAAPKSAVTH
Trigger: ATGTGTCACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS CCA 90 bp CCAGTCTGGCTGCCACGAATTCCAGCCGTTTGGACTCCGAATAGCTaGGGCCCTGCGTTTGGTGGAAGACGGCCATGCTGCCAGATTCAC +
Preference number: 5 (lower is better)
Translates to: PVWLPRIPAVWTPNS*GPAFGGRRPCCQIH
Trigger: GTGAATCTGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTGGCAGCCAGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAGGCACCTGGCTCGTATaGGGCATCCCGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: EPVNKAPWLCTLISQMGEGTWLV*GIPPRS
Trigger: AGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCC...TTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp AGCTCCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTTGCCGTCCACCTGGCTaGAGGGCACCAATATCCAGA +
Preference number: 5 (lower is better)
Translates to: SSSLSPLSVPTLSPCALCCRPPG*RAPISR
Trigger: TCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGCA...ACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGTTGCAGGTCACATTCTaGCCGTCCACCTGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWLQVTF*PSTWLE
Trigger: CTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCAA...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATGGGGGTCTTCATCCATaGGGGTCGGGTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: SLSPLSPDAVTLCPLSVDGGLHP*GSGPTL
Trigger: CAGAGTTGGACCCGACCCCAATGGATGAAGACCCCC...ATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTGGGGGTCTTCATCCATaGGGGTCGGGTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSGGLHP*GSGPTL
Trigger: CAGAGTTGGACCCGACCCCAATGGATGAAGACCCCC...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp CCAGTCTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTTGGAGACCTATGAACTaGCACCTGCCCCCGTCGTTT +
Preference number: 5 (lower is better)
Translates to: PVSLPSQSRRCHLVPSVCWRPMN*HLPPSF
Trigger: AAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCA...ACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTACCCCCAGGCAGCTGCTaGCGGCCTGAATTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVPPGSC*RPELQP
Trigger: AGGCTGCAATTCAGGCCGCAAGCAGCTGCCTGGGGG...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTGGAGCGGAGGGGAGTaGGCGGCCAGTCCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSWSGGE*AASPAR
Trigger: CCTGGCGGGACTGGCCGCCAACTCCCCTCCGCTCCA...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS-3UTR CAA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGCCACAAAAGACCCCATaGCACACAGCCGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWPQKTP*HTAAGG
Trigger: ACCTCCAGCGGCTGTGTGCAATGGGGTCTTTTGTGG...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp ACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCTGCCGTCCACCTGGCTaGAGGGCACCAATATCCAGA +
Preference number: 5 (lower is better)
Translates to: TRLPGSAPSSVKWGKPHGCRPPG*RAPISR
Trigger: TCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGCA...GCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp GCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCATGGCAGTGGTTGCAGGTCACATTCTaGCCGTCCACCTGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: APWLCTLISQMGETSWQWLQVTF*PSTWLE
Trigger: CTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCAA...CCACTGCCATGAGGTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp ACCTGCCCCCGTCGTTTTGAGGTCTGGCACAGGGAGGGAGGCTGGTCTCTTTGGGTTGTGTTGATTGGTTaGTCCACAGGACGGATCAGG +
Preference number: 5 (lower is better)
Translates to: TCPRRFEVWHREGGWSLWVVLIG*STGRIR
Trigger: CCTGATCCGTCCTGTGGACAAACCAATCAACACAAC...CCAAAGAGACCAGCCTCCCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGGTTGTGTTGATTGGTTaGTCCACAGGACGGATCAGG +
Preference number: 5 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQVVLIG*STGRIR
Trigger: CCTGATCCGTCCTGTGGACAAACCAATCAACACAAC...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCCCCCCAGGCAGCTGCTaGCGGCCTGAATTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIPPGSC*RPELQP
Trigger: AGGCTGCAATTCAGGCCGCAAGCAGCTGCCTGGGGG...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGTTCCCATTTAGCATCTaGGCCCAAGGTCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQFPFSI*AQGLLS
Trigger: GGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGAA...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS GCA 90 bp AGTGAGAGGCACACTGGAAGGACTCAGCACAGAGCCCGTAGTAGGTaGTCAATTACGGCAGCTCTGGTGATGCTCACTCGAGGGACACAG +
Preference number: 5 (lower is better)
Translates to: SERHTGRTQHRARSR*SITAALVMLTRGTQ
Trigger: CTGTGTCCCTCGAGTGAGCATCACCAGAGCTGCCGTAATTGAGCACCTACTACGGGCTCTGTGCTGAGTCCTTCCAGTGTGCCTCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCTGCGTCACCTCCATGTaGGGCACCGGTTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTCVTSM*GTGSWG
Trigger: CCCCCAGGAACCGGTGCCCAACATGGAGGTGACGCA...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp AGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCTGCTGGGGCCCTGCGTTaGGTGGAAGACGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: SSRPEAKFLPKFSGGPHPAGALR*VEDGHA
Trigger: AGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGC...AGGGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp ACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGGGGAAACCTCTCGTGCTCCACCTaGCAGGTCACATTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: TSEQGSLALHPHQSNGGNLSCST*QVTFLP
Trigger: CGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGAG...GTTTCCCCCATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGGTTGTGTTGATTGGTTaGTCCACAGGACGGATCAGG +
Preference number: 5 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVVVLIG*STGRIR
Trigger: CCTGATCCGTCCTGTGGACAAACCAATCAACACAAC...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp CAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTATAGGAGCGTGCGAGCTCCTAGGGCATaGGTGACGTTGCAGATTAAA +
Preference number: 5 (lower is better)
Translates to: QLGLLGLGSHPSWSYRSVRAPRA*VTLQIK
Trigger: TTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCG...CACGCTCCTATAGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCGGGGGTCTTCATCCATaGGGGTCGGGTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSGGLHP*GSGPTL
Trigger: CAGAGTTGGACCCGACCCCAATGGATGAAGACCCCC...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTCCTGCCCCCGTCGTTTaGAGGTCTGGCACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPPAPVV*RSGTGR
Trigger: CCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGG...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCCCCCCAGGCAGCTGCTaGCGGCCTGAATTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTPPGSC*RPELQP
Trigger: AGGCTGCAATTCAGGCCGCAAGCAGCTGCCTGGGGG...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGGCCCACGTCCTTGCCAGCCCTTCCCCCTTGTGTaGGAAATTGCATTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GSSSIGVGSNSGGPRPCQPFPLV*EIAFAS
Trigger: AGAAGCAAATGCAATTTCCAACACAAGGGGGAAGGG...CTGGCAAGGACGTGGGCCTCCAGAGTTGGACCCGACCCCAATGGATGAAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGTGGGCCTCCTGGGTCTaGGGTCGCATCCATCTTGGT +
Preference number: 5 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWWASWV*GRIHLG
Trigger: ACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCA...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTGGCGGTCCCATTCTTTaGGCCAGGGATTGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: RVVLETYELAPAPVVLRSGGPIL*ARDWLS
Trigger: GCTCAACCAATCCCTGGCCAAAAGAATGGGACCGCC...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS CCA 90 bp GCGCTGGCATGCTCTGTACCTTTGACCTGGACGGTCAGTTCTGCCTaGCGAGCTCCTAGGGCATTGGTGACGTTGCAGATTAAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: ALACSVPLTWTVSSA*RAPRALVTLQIKVV
Trigger: CACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGTCCAGGTCAAAGGTACAGAGCATGCCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS-3UTR CAA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTGGCACCTGGCTCGTATaGGGCATCCCGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSGTWLV*GIPPRS
Trigger: AGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCC...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACGGCACCTGGCTCGTATaGGGCATCCCGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHGTWLV*GIPPRS
Trigger: AGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCC...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp ACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCTGCTCACAGTTGCAGGTCACATTCTaGCCGTCCACCTGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: TLCPLSVDPGKSCSLCSQLQVTF*PSTWLE
Trigger: CTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCAA...CTGTGAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp ATTCCTGGCTCTGTGGACTCCAAGGATGCCCCCTCCCTCCAGAAAAAGGTCATCTTGCAGGTCACATTCTaGCCGTCCACCTGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: IPGSVDSKDAPSLQKKVILQVTF*PSTWLE
Trigger: CTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCAA...GATGACCTTTTTCTGGAGGGAGGGGGCATCCTTGGAGTCCACAGAGCCAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp CCACCAAAGCAACCAATGTTCCTTTATCTCCCCAACTCTGTGGGGTCCCACTGGCTGGGAGGTCCCTCTTaGACCTGGACGGTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PPKQPMFLYLPNSVGSHWLGGPS*TWTVSS
Trigger: AGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCAG...CCAGTGGGACCCCACAGAGTTGGGGAGATAAAGGAACATTGGTTGCTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000187830.2
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCCCGACGCTGTCACCTaGTGCCCTCTGTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSPDAVT*CPLSVD
Trigger: ATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGG...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCGGGGGTCTTCATCCATaGGGGTCGGGTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIGGLHP*GSGPTL
Trigger: CAGAGTTGGACCCGACCCCAATGGATGAAGACCCCC...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTTGGAGACCTATGAACTaGCACCTGCCCCCGTCGTTT +
Preference number: 5 (lower is better)
Translates to: RVVLETYELAPAPVVLRSWRPMN*HLPPSF
Trigger: AAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCA...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GTTGCACTGAGCAGCTGGGCCTCCTGGGTCTTGGGTCGCATCCATCTTGGTCCTTCTTCATTTAGCGTCTaGCTTCCATGCCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VALSSWASWVLGRIHLGPSSFSV*LPCLWF
Trigger: GAACCAGAGGCATGGAAGCAAGACGCTAAATGAAGA...AGGACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCAGCTGCTCAGTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp AAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAACTCTCGTGCTCCACCTaGCAGGTCACATTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: KIGPFILSSWAFISKPLELSCST*QVTFLP
Trigger: CGGCAAGAATGTGACCTGCAAGGTGGAGCACGAGAG...TTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp ACCTCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCCGAGCTCCTAGGGCATaGGTGACGTTGCAGATTAAA +
Preference number: 5 (lower is better)
Translates to: TSWQWGEDSVRGTLEGLSRAPRA*VTLQIK
Trigger: TTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCG...GCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGCTCTGGTTGGCAGTATaGGCAGTACTTCTTGCATGT +
Preference number: 5 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWLWLAV*AVLLAC
Trigger: ACATGCAAGAAGTACTGCCAATACTGCCAACCAGAG...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGCCCTTCCCCCTTGTGTaGGAAATTGCATTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWPFPLV*EIAFAS
Trigger: AGAAGCAAATGCAATTTCCAACACAAGGGGGAAGGG...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGGCAGATGGAAGCCGTCGCCTCATCTGTCGTGGAACGTGTGCTGTGCACCTCCATAGACCTTTTTAACTaGTCAGTTGCACTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GQMEAVASSVVERVLCTSIDLFN*SVALSS
Trigger: GCTGCTCAGTGCAACTGACAAGTTAAAAAGGTCTAT...GGAGGTGCACAGCACACGTTCCACGACAGATGAGGCGACGGCTTCCATCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp CTCTCTCCCCTCTCAGTCCCGACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCAGAGCAGCTCAAGCTTaGCATTCCCATTTAGCATCT +
Preference number: 5 (lower is better)
Translates to: LSPLSVPTLSPCALCLWIRAAQA*HSHLAS
Trigger: AGATGCTAAATGGGAATGCAAAGCTTGAGCTGCTCT...GATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCCTGTGGGCTCTGGGTaGCTGCGAGCATCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWPVGSG*LRASQV
Trigger: GACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGG...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTCGAGCTCCTAGGGCATaGGTGACGTTGCAGATTAAA +
Preference number: 5 (lower is better)
Translates to: RVVLETYELAPAPVVLRSRAPRA*VTLQIK
Trigger: TTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCG...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GCCTGGCGAGCTCCTAGGGCATTGGTGACGTTGCAGATTAAAGTTGTGTTGATTCTGGGAGGTCCCTCTTaGACCTGGACGGTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: AWRAPRALVTLQIKVVLILGGPS*TWTVSS
Trigger: AGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCAG...AATCAACACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp ATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGCTGGGAGGTCCCTCTTaGACCTGGACGGTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: INEPVNKAPWLCTLISQMLGGPS*TWTVSS
Trigger: AGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCAG...CATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp GACGCTGTCACCTTGTGCCCTCTGTCTGTGGATCCTGGGAAGAGCTGTTCTCTCAGGCAGAAGTATCACTaGGAGCCAAGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: DAVTLCPLSVDPGKSCSLRQKYH*EPRVQD
Trigger: GTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCCT...GAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGACAGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS-3UTR CAA 90 bp AGGCTGGTCTCTTTGGAGGGGGTCTTCATCCATTGGGGTCGGGTCCAACTCTGGAGAGCAGCTCAAGCTTaGCATTCCCATTTAGCATCT +
Preference number: 5 (lower is better)
Translates to: RLVSLEGVFIHWGRVQLWRAAQA*HSHLAS
Trigger: AGATGCTAAATGGGAATGCAAAGCTTGAGCTGCTCT...CCAGAGTTGGACCCGACCCCAATGGATGAAGACCCCCTCCAAAGAGACCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCCGAGCTCCTAGGGCATaGGTGACGTTGCAGATTAAA +
Preference number: 5 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSRAPRA*VTLQIK
Trigger: TTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCG...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGTGGAGGCCCACGTCCTaGCCAGCTCCAGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWWRPTS*PAPVSL
Trigger: GAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCA...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGATGGAGACCTATGAACTaGCACCTGCCCCCGTCGTTT +
Preference number: 5 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRWRPMN*HLPPSF
Trigger: AAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCA...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTCCCTTCCCCCTTGTGTaGGAAATTGCATTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RVVLETYELAPAPVVLRSPFPLV*EIAFAS
Trigger: AGAAGCAAATGCAATTTCCAACACAAGGGGGAAGGG...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTAGAGCAGCTCAAGCTTaGCATTCCCATTTAGCATCT +
Preference number: 5 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSRAAQA*HSHLAS
Trigger: AGATGCTAAATGGGAATGCAAAGCTTGAGCTGCTCT...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp AGGGTGGTCTTGGAGACCTATGAACTTGCACCTGCCCCCGTCGTTTTGAGGTCTAGGGCATTGGTGACGTaGCAGATTAAAGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: RVVLETYELAPAPVVLRSRALVT*QIKVVL
Trigger: CAACACAACTTTAATCTGCAACGTCACCAATGCCCT...AGACCTCAAAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCAAGACCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp ACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCTCGAGCTCCTAGGGCATaGGTGACGTTGCAGATTAAA +
Preference number: 5 (lower is better)
Translates to: TLPKERSGPLSSAPGHSSRAPRA*VTLQIK
Trigger: TTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCG...AGATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp ACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAGGGCACTCTGGTTGGCAGTATaGGCAGTACTTCTTGCATGT +
Preference number: 5 (lower is better)
Translates to: TCCCENQVLPIWLHWERALWLAV*AVLLAC
Trigger: ACATGCAAGAAGTACTGCCAATACTGCCAACCAGAG...TGCCCTCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTATGCATCCCTTCCCCCTaGTGTTGGAAATTGCATTTG +
Preference number: 5 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVCIPSP*CWKLHL
Trigger: CAAATGCAATTTCCAACACAAGGGGGAAGGGATGCA...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp TGTCCTTTTACTGTAATAAACTGTAACTGTGAGCCTAACAGCTTTCCTGAGTCTGGCACCTGGCTCGTATaGGGCATCCCGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: CPFTVINCNCEPNSFPESGTWLV*GIPPRS
Trigger: AGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCC...AGACTCAGGAAAGCTGTTAGGCTCACAGTTACAGTTTATTACAGTAAAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCGGCACCTGGCTCGTATaGGGCATCCCGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: FSQTVFFIRGILLSALKIGTWLV*GIPPRS
Trigger: AGACCTGGGCGGGATGCCCAATACGAGCCAGGTGCC...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp ATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCATCAGTCAAATGGTTGTGTTGATTGGTTaGTCCACAGGACGGATCAGG +
Preference number: 5 (lower is better)
Translates to: INEPVNKAPWLCTLISQMVVLIG*STGRIR
Trigger: CCTGATCCGTCCTGTGGACAAACCAATCAACACAAC...CATTTGACTGATGAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTCTGGGAGGTCCCTCTTaGACCTGGACGGTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFLGGPS*TWTVSS
Trigger: AGAACTGACCGTCCAGGTCAAAGAGGGACCTCCCAG...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000187830.2
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATATGGAGGCCCACGTCCTaGCCAGCTCCAGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIWRPTS*PAPVSL
Trigger: GAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCA...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCCCTGCCCCCGTCGTTTaGAGGTCTGGCACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: FSQTVFFIRGILLSALKIPAPVV*RSGTGR
Trigger: CCTCCCTGTGCCAGACCTCAAAACGACGGGGGCAGG...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TCCTGTTTGGTCCAGCCTTCCAGGCGGTCCCATTCTTTTGGCCAGGGATTGGTTTATTGGCAGTACTTCTaGCATGTTGTCACATGTTGC +
Preference number: 5 (lower is better)
Translates to: SCLVQPSRRSHSFGQGLVYWQYF*HVVTCC
Trigger: GCAACATGTGACAACATGCAAGAAGTACTGCCAATA...AACCAATCCCTGGCCAAAAGAATGGGACCGCCTGGAAGGCTGGACCAAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp AACCTTGCCCAAAGAAAGATCGGGCCCTTTATCCTCAGCTCCTGGGCATTCATCAGGCAGAAGTATCACTaGGAGCCAAGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: NLAQRKIGPFILSSWAFIRQKYH*EPRVQD
Trigger: GTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCCT...GATGAATGCCCAGGAGCTGAGGATAAAGGGCCCGATCTTTCTTTGGGCAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTGCTGGGGCCCTGCGTTaGGTGGAAGACGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFAGALR*VEDGHA
Trigger: AGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGC...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TCATGGCAGTGGGGTGAGGATTCAGTGAGAGGCACACTGGAAGGACTCAGCACACAGATTAAAGTTGTGTaGATTGGTTTGTCCACAGGA +
Preference number: 5 (lower is better)
Translates to: SWQWGEDSVRGTLEGLSTQIKVV*IGLSTG
Trigger: TCCTGTGGACAAACCAATCAACACAACTTTAATCTG...TGTGCTGAGTCCTTCCAGTGTGCCTCTCACTGAATCCTCACCCCACTGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCTGGAGGCCCACGTCCTaGCCAGCTCCAGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: NVFSQTVFFIRGILLSALWRPTS*PAPVSL
Trigger: GAGAGAGACTGGAGCTGGCAAGGACGTGGGCCTCCA...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGTGGAGACCTATGAACTaGCACCTGCCCCCGTCGTTT +
Preference number: 5 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWWRPMN*HLPPSF
Trigger: AAACGACGGGGGCAGGTGCAAGTTCATAGGTCTCCA...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TCCTCAGCTCCTGGGCATTCATCTCTAAGCCCTTGGAATATCCTGCCTGGTAGCTATTGGCAGTACTTCTaGCATGTTGTCACATGTTGC +
Preference number: 5 (lower is better)
Translates to: SSAPGHSSLSPWNILPGSYWQYF*HVVTCC
Trigger: GCAACATGTGACAACATGCAAGAAGTACTGCCAATA...GCTACCAGGCAGGATATTCCAAGGGCTTAGAGATGAATGCCCAGGAGCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTCTCTGGTTGGCAGTATaGGCAGTACTTCTTGCATGT +
Preference number: 5 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPLWLAV*AVLLAC
Trigger: ACATGCAAGAAGTACTGCCAATACTGCCAACCAGAG...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACTGGGCCTCCTGGGTCTaGGGTCGCATCCATCTTGGT +
Preference number: 5 (lower is better)
Translates to: CAPPPFADLNLCPFTVINWASWV*GRIHLG
Trigger: ACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCA...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTGGGCCTCCTGGGTCTaGGGTCGCATCCATCTTGGT +
Preference number: 5 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNWASWV*GRIHLG
Trigger: ACCAAGATGGATGCGACCCAAGACCCAGGAGGCCCA...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGGGAGAAAACCTGTCTGCTCCTaGATTTCCACAAAAGACCCC +
Preference number: 5 (lower is better)
Translates to: LSHVAVRIRCCLYGSTGRKPVCS*ISTKDP
Trigger: GGGGTCTTTTGTGGAAATCAAGGAGCAGACAGGTTT...TCTCCCAGTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp CTGAAAAGATTCCCGACTCCCGTGCAGGAGCAATGCAGAGGGAGGGTGTGGAGTTCTGTGAGGGTTCATTaGTCAATATCTATCACAATG +
Preference number: 5 (lower is better)
Translates to: LKRFPTPVQEQCRGRVWSSVRVH*SISITM
Trigger: CATTGTGATAGATATTGACAAATGAACCCTCACAGA...ACTCCACACCCTCCCTCTGCATTGCTCCTGCACGGGAGTCGGGAATCTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTGCCGTCCACCTGGCTaGAGGGCACCAATATCCAGA +
Preference number: 5 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNCRPPG*RAPISR
Trigger: TCTGGATATTGGTGCCCTCAAGCCAGGTGGACGGCA...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GAGGTTTCTGCTGCTGGATGCGGTTTCTCGTTCCTACAAAGGCTCACCCAGGTACAGATTAAAGTTGTGTaGATTGGTTTGTCCACAGGA +
Preference number: 5 (lower is better)
Translates to: EVSAAGCGFSFLQRLTQVQIKVV*IGLSTG
Trigger: TCCTGTGGACAAACCAATCAACACAACTTTAATCTG...TACCTGGGTGAGCCTTTGTAGGAACGAGAAACCGCATCCAGCAGCAGAAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp TGTGGTCTGCTATGCAGTAAAGGCTTAACCTTGCCCAAAGAAAGATCGGGCCCTAGGGCATTGGTGACGTaGCAGATTAAAGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: CGLLCSKGLTLPKERSGPRALVT*QIKVVL
Trigger: CAACACAACTTTAATCTGCAACGTCACCAATGCCCT...AGGGCCCGATCTTTCTTTGGGCAAGGTTAAGCCTTTACTGCATAGCAGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCCCCTTCCCCCTTGTGTaGGAAATTGCATTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCPFPLV*EIAFAS
Trigger: AGAAGCAAATGCAATTTCCAACACAAGGGGGAAGGG...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACTGCATCCCTTCCCCCTaGTGTTGGAAATTGCATTTG +
Preference number: 5 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHCIPSP*CWKLHL
Trigger: CAAATGCAATTTCCAACACAAGGGGGAAGGGATGCA...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATTCTCTGGTGGCCCACACCAGAGCAGCTCAAGCTTaGCATTCCCATTTAGCATCT +
Preference number: 5 (lower is better)
Translates to: EAQGQRPNFYQNSLVAHTRAAQA*HSHLAS
Trigger: AGATGCTAAATGGGAATGCAAAGCTTGAGCTGCTCT...GGTGTGGGCCACCAGAGAATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTCAAGAAACATACTCTTaGGCCCAGCAATTCCACCTC +
Preference number: 5 (lower is better)
Translates to: PALPSLSRANPLSCLFSLQETYS*AQQFHL
Trigger: GAGGTGGAATTGCTGGGCCAAAGAGTATGTTTCTTG...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATATTGCAGGTCACATTCTaGCCGTCCACCTGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFILQVTF*PSTWLE
Trigger: CTCAAGCCAGGTGGACGGCAAGAATGTGACCTGCAA...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGCTCCACAGGGCATTGGTGACGTaGCAGATTAAAGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LHVVTCCCENQVLPIWLHRALVT*QIKVVL
Trigger: CAACACAACTTTAATCTGCAACGTCACCAATGCCCT...GTGGAGCCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTTGTAAATGTAATCAATGAACCAGTGAACAAGGCTCCCTGGCTCTGCACCCTCAGGGCATTGGTGACGTaGCAGATTAAAGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: FVNVINEPVNKAPWLCTLRALVT*QIKVVL
Trigger: CAACACAACTTTAATCTGCAACGTCACCAATGCCCT...GAGGGTGCAGAGCCAGGGAGCCTTGTTCACTGGTTCATTGATTACATTTACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS-3UTR CAA 90 bp GGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTGCTATTGGCAGTACTTCTaGCATGTTGTCACATGTTGC +
Preference number: 5 (lower is better)
Translates to: GSSISVQSKSSVLLIFSCYWQYF*HVVTCC
Trigger: GCAACATGTGACAACATGCAAGAAGTACTGCCAATA...GCAAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp CCGGCTCTTCCATCTCTGTCCAGAGCAAATCCTCTGTCCTGCTTATTTTCTCTTATAGACCTTTTTAACTaGTCAGTTGCACTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PALPSLSRANPLSCLFSLIDLFN*SVALSS
Trigger: GCTGCTCAGTGCAACTGACAAGTTAAAAAGGTCTAT...AAGAGAAAATAAGCAGGACAGAGGATTTGCTCTGGACAGAGATGGAAGAGCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GACGGATACAGAGATTTAGAAGCTCAAGGCCAGAGGCCAAATTTTTACCAAAATGCATGCTCTGTACCTTaGACCTGGACGGTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: DGYRDLEAQGQRPNFYQNACSVP*TWTVSS
Trigger: AGAACTGACCGTCCAGGTCAAAGGTACAGAGCATGC...ATTTTGGTAAAAATTTGGCCTCTGGCCTTGAGCTTCTAAATCTCTGTATCCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS-3UTR CAA 90 bp GCTGGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTCAGATTAAAGTTGTGTaGATTGGTTTGTCCACAGGA +
Preference number: 5 (lower is better)
Translates to: AGRKWLQLTTFFKFTSSSQIKVV*IGLSTG
Trigger: TCCTGTGGACAAACCAATCAACACAACTTTAATCTG...ACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATATTCCCATTTAGCATCTaGGCCCAAGGTCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIFPFSI*AQGLLS
Trigger: GGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGAA...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TACTTCTTGCATGTTGTCACATGTTGCTGTGAGAATCAGGTGCTGCCTATATGGTATTGGCAGTACTTCTaGCATGTTGTCACATGTTGC +
Preference number: 5 (lower is better)
Translates to: YFLHVVTCCCENQVLPIWYWQYF*HVVTCC
Trigger: GCAACATGTGACAACATGCAAGAAGTACTGCCAATA...CCATATAGGCAGCACCTGATTCTCACAGCAACATGTGACAACATGCAAGAAGTA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACAGGCAGAAGTATCACTaGGAGCCAAGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: CAPPPFADLNLCPFTVINRQKYH*EPRVQD
Trigger: GTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCCT...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AACGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCTTCCCATTTAGCATCTaGGCCCAAGGTCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: NVFSQTVFFIRGILLSALFPFSI*AQGLLS
Trigger: GGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGAA...GAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp CGTATTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAATTCCCATTTAGCATCTaGGCCCAAGGTCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RIFPNSFLYKRNSAVCPQFPFSI*AQGLLS
Trigger: GGAGAGAAGACCTTGGGCCAAGATGCTAAATGGGAA...TTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTGTTGTGTTGATTGGTTaGTCCACAGGACGGATCAGG +
Preference number: 5 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFVVLIG*STGRIR
Trigger: CCTGATCCGTCCTGTGGACAAACCAATCAACACAAC...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp GGCAGAAAGTGGCTGCAGCTGACAACCTTCTTCAAGTTCACATCTAGTAGTTTTCAGATTAAAGTTGTGTaGATTGGTTTGTCCACAGGA +
Preference number: 5 (lower is better)
Translates to: GRKWLQLTTFFKFTSSSFQIKVV*IGLSTG
Trigger: TCCTGTGGACAAACCAATCAACACAACTTTAATCTG...AAAACTACTAGATGTGAACTTGAAGAAGGTTGTCAGCTGCAGCCACTTTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATAAGGGCATTGGTGACGTaGCAGATTAAAGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIRALVT*QIKVVL
Trigger: CAACACAACTTTAATCTGCAACGTCACCAATGCCCT...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCTGCATCCCTTCCCCCTaGTGTTGGAAATTGCATTTG +
Preference number: 5 (lower is better)
Translates to: FSQTVFFIRGILLSALKICIPSP*CWKLHL
Trigger: CAAATGCAATTTCCAACACAAGGGGGAAGGGATGCA...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp AGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTAGGCAGAAGTATCACTaGGAGCCAAGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SFLYKRNSAVCPQDHRPFRQKYH*EPRVQD
Trigger: GTCTTGAACTCTTGGCTCCAAGTGATACTTCTGCCT...AAAAGGTCTATGATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTGGCCCAAGGTCTTCTCTCCCTCAACGTATTTTCCCAAACAGTTTTCTTTATAATAGACCTTTTTAACTaGTCAGTTGCACTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LAQGLLSLNVFSQTVFFIIDLFN*SVALSS
Trigger: GCTGCTCAGTGCAACTGACAAGTTAAAAAGGTCTAT...TATAAAGAAAACTGTTTGGGAAAATACGTTGAGGGAGAGAAGACCTTGGGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TGTGCACCTCCTCCCTTTGCTGATCTTAATCTCTGTCCTTTTACTGTAATAAACCAGATTAAAGTTGTGTaGATTGGTTTGTCCACAGGA +
Preference number: 5 (lower is better)
Translates to: CAPPPFADLNLCPFTVINQIKVV*IGLSTG
Trigger: TCCTGTGGACAAACCAATCAACACAACTTTAATCTG...GTTTATTACAGTAAAAGGACAGAGATTAAGATCAGCAAAGGGAGGAGGTGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS-3UTR CAA 90 bp TTTTCCCAAACAGTTTTCTTTATAAGAGGAATTCTGCTGTCTGCCCTCAAGATCATAGACCTTTTTAACTaGTCAGTTGCACTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: FSQTVFFIRGILLSALKIIDLFN*SVALSS
Trigger: GCTGCTCAGTGCAACTGACAAGTTAAAAAGGTCTAT...GATCTTGAGGGCAGACAGCAGAATTCCTCTTATAAAGAAAACTGTTTGGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS GCA 72 bp GCAGCAGCGGCCACGCGGCGGCCATGGCTCGGGCCATaGCAGTTGCTCCGAGCAGCTGGGCCTCCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: AAAATRRPWLGP*QLLRAAGPPAG
Trigger: GCCCGCGGGAGGCCCAGCTGCTCGGAGCAACTGGCATGGCCCGAGCCATGGCCGCCGCGTGGCCGCTGCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS GCA 72 bp CGGCCACGCGGCGGCCATGGCTCGGGCCATGCCAGTTaGTCCGAGCAGCTGGGCCTCCCGCGGGCGTCTCCT +
Preference number: 6 (lower is better)
Translates to: RPRGGHGSGHAS*SEQLGLPRASP
Trigger: AGGAGACGCCCGCGGGAGGCCCAGCTGCTCGGAGCAACTGGCATGGCCCGAGCCATGGCCGCCGCGTGGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS GCA 72 bp GAGTCGCCCAAGAAGCCGGGCACCTGGGTGGGCGCCTaGACGACGACGTCCCCGGTTCCTGGGGGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: ESPKKPGTWVGA*TTTSPVPGGGQ
Trigger: CTGGCCACCCCCAGGAACCGGGGACGTCGTCGTGCAGGCGCCCACCCAGGTGCCCGGCTTCTTGGGCGACTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS CCA 72 bp GTAGCGCCACCAGCAGCAGCGGCCACGCGGCGGCCATaGCTCGGGCCATGCCAGTTGCTCCGAGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: VAPPAAAATRRP*LGPCQLLRAAG
Trigger: CCCAGCTGCTCGGAGCAACTGGCATGGCCCGAGCCATGGCCGCCGCGTGGCCGCTGCTGCTGGTGGCGCTAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000425690.8
CDS CCA 72 bp GGCAGCGTCACGGAGTCGCCCAAGAAGCCGGGCACCTaGGTGGGCGCCTGCACGACGACGTCCCCGGTTCCT +
Preference number: 6 (lower is better)
Translates to: GSVTESPKKPGT*VGACTTTSPVP
Trigger: AGGAACCGGGGACGTCGTCGTGCAGGCGCCCACCCAGGTGCCCGGCTTCTTGGGCGACTCCGTGACGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS CAA 90 bp ACCCACTTCTTCAAGCTCCAGACAAGTGACTGGAGCGGAGGGGAGTaGGCGGCCAGTCCCGCCAGGCGCGGGGTGGGCCACCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: THFFKLQTSDWSGGE*AASPARRGVGHPGW
Trigger: CCAGCCTGGGTGGCCCACCCCGCGCCTGGCGGGACTGGCCGCCAACTCCCCTCCGCTCCAGTCACTTGTCTGGAGCTTGAAGAAGTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS GCA 72 bp AGCTGGGGCCCTGCGTTTGGTGGAAGACGGCCATGCTaGCAGATTCACCATGCCGCGCCCAAGTCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: SWGPAFGGRRPC*QIHHAAPKSAV
Trigger: CACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS GCA 72 bp GATTCACCATGCCGCGCCCAAGTCAGCTGTGACACATaGGTCACCTCCATGTTGGGCACCGGTTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: DSPCRAQVSCDT*VTSMLGTGSWG
Trigger: CCCCCAGGAACCGGTGCCCAACATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCGCGGCATGGTGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS CAA 90 bp CACGAATTCCAGCCGTTTGGACTCCGAATAGCTGGGGCCCTGCGTTaGGTGGAAGACGGCCATGCTGCCAGATTCACCATGCCGCGCCCA +
Preference number: 6 (lower is better)
Translates to: HEFQPFGLRIAGALR*VEDGHAARFTMPRP
Trigger: TGGGCGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCAAACGGCTGGAATTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS TCA 72 bp GCTGCCAGATTCACCATGCCGCGCCCAAGTCAGCTGTaGCACATGCGTCACCTCCATGTTGGGCACCGGTTC +
Preference number: 6 (lower is better)
Translates to: AARFTMPRPSQL*HMRHLHVGHRF
Trigger: GAACCGGTGCCCAACATGGAGGTGACGCATGTGTCACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000187830.2
CDS GCA 72 bp AATAGCTGGGGCCCTGCGTTTGGTGGAAGACGGCCATaGTGCCAGATTCACCATGCCGCGCCCAAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: NSWGPAFGGRRP*CQIHHAAPKSA
Trigger: AGCTGACTTGGGCGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS GCA 72 bp GTTTGGTGGAAGACGGCCATGCTGCCAGATTCACCATaGCGCGCCCAAGTCAGCTGTGACACATGCGTCACC +
Preference number: 6 (lower is better)
Translates to: VWWKTAMLPDSP*RAQVSCDTCVT
Trigger: GGTGACGCATGTGTCACAGCTGACTTGGGCGCGGCATGGTGAATCTGGCAGCATGGCCGTCTTCCACCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS CCA 72 bp CCCAAGTCAGCTGTGACACATGCGTCACCTCCATGTTaGGCACCTGTAGGTAGCAGGGCAGCGTCACGGAGT +
Preference number: 6 (lower is better)
Translates to: PKSAVTHASPPC*APVGSRAASRS
Trigger: ACTCCGTGACGCTGCCCTGCTACCTACAGGTGCCCAACATGGAGGTGACGCATGTGTCACAGCTGACTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS CCA 72 bp TGCTCTGTACGTGCTCCAATTATAGCCTGTGGGCTCTaGGTTGCTGCGAGCATCGCAGGTCAGGGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: CSVRAPIIACGL*VAASIAGQGGL
Trigger: GAGGCCACCCTGACCTGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTATAATTGGAGCACGTACAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587785.1
CDS CAA 72 bp CAGCCGTTTGGACTCCGAATAGCTGGGGCCCTGCGTTaGGTGGAAGACGGCCATGCTGCCAGATTCACCATG +
Preference number: 6 (lower is better)
Translates to: QPFGLRIAGALR*VEDGHAARFTM
Trigger: CATGGTGAATCTGGCAGCATGGCCGTCTTCCACCAAACGCAGGGCCCCAGCTATTCGGAGTCCAAACGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000187830.2
ENST00000344956.8
ENST00000403059.8
ENST00000406449.8
ENST00000425690.8
CDS GCA 72 bp CACACTGGAAGGACTCAGCACAGAGCCCGTAGTAGGTaGTCAATTACGGCAGCTCTGGTGATGCTCACTCGA +
Preference number: 6 (lower is better)
Translates to: HTGRTQHRARSR*SITAALVMLTR
Trigger: TCGAGTGAGCATCACCAGAGCTGCCGTAATTGAGCACCTACTACGGGCTCTGTGCTGAGTCCTTCCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406449.8
CDS CCA 72 bp TGCTCTGTACCTTTGACCTGGACGGTCAGTTCTGCCTaGCGAGCTCCTAGGGCATTGGTGACGTTGCAGATT +
Preference number: 6 (lower is better)
Translates to: CSVPLTWTVSSA*RAPRALVTLQI
Trigger: AATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGTCCAGGTCAAAGGTACAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344956.8
CDS CAA 90 bp CCTTTGACCTGGACGGTCAGTTCTGCCTGGCGAGCTCCTAGGGCATaGGTGACGTTGCAGATTAAAGTTGTGTTGATTGGTTTGTCCACA +
Preference number: 6 (lower is better)
Translates to: PLTWTVSSAWRAPRA*VTLQIKVVLIGLST
Trigger: TGTGGACAAACCAATCAACACAACTTTAATCTGCAACGTCACCAATGCCCTAGGAGCTCGCCAGGCAGAACTGACCGTCCAGGTCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344956.8