RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PUS7L (Homo sapiens)

Ensembl gene IDs: ENSG00000129317

Ensembl transcript IDs: ENST00000344862.10, ENST00000416848.6, ENST00000431332.7, ENST00000547156.1, ENST00000549868.1, ENST00000550784.5, ENST00000551923.5, ENST00000553166.1

Found 414 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAGGGTATGTACTATGGAGTAGTGACAGAAGCCACTTGAAGATTTaGGGCCATACTTGCAGGTGTAAATGTGTTATGTTGAGGGGTTTG +
Preference number: 1 (lower is better)
Translates to: KGYVLWSSDRSHLKI*GHTCRCKCVMLRGL
Trigger: CAAACCCCTCAACATAACACATTTACACCTGCAAGTATGGCCCCAAATCTTCAAGTGGCTTCTGTCACTACTCCATAGTACATACCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CCA 90 bp AATGCAGGAACAGAAAACCAAATACCAAATGTTCTTACTCATAAGTaGGAGCTGAACTTTGAGTACACTTGGACTCTAAGAAGGGAACAA +
Preference number: 1 (lower is better)
Translates to: NAGTENQIPNVLTHK*ELNFEYTWTLRREQ
Trigger: TTGTTCCCTTCTTAGAGTCCAAGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTTTTCTGTTCCTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR GCA 90 bp ATTCCACACCTGACTTCATGTGATAGGTCACAGTCAAAATGTAGGTaGACAACATATAGTCTATTCAGTGTTCCCAAGGGAAAAATAAAT +
Preference number: 1 (lower is better)
Translates to: IPHLTSCDRSQSKCR*TTYSLFSVPKGKIN
Trigger: ATTTATTTTTCCCTTGGGAACACTGAATAGACTATATGTTGTGCACCTACATTTTGACTGTGACCTATCACATGAAGTCAGGTGTGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR TCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCGGCAGGAGAATGGCTTaGACCCAGGAGGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTGRRMA*TQEEEV
Trigger: AACCTCCTCCTCCTGGGTTCAAGCCATTCTCCTGCC...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCGGCTTTGGGGTCACATaGACCTTAAATTTGGACCCT +
Preference number: 2 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTGFGVT*TLNLDP
Trigger: AGGGTCCAAATTTAAGGTCCATGTGACCCCAAAGCC...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR TCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCAGGCATCACACAACCTaGCATCAAACTAAACTACAA +
Preference number: 2 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTRHHTT*HQTKLQ
Trigger: TTGTAGTTTAGTTTGATGTCAGGTTGTGTGATGCCT...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR GCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGACTCTTCACCCTATCCTaGTGCCCAAACACCCTTAGT +
Preference number: 2 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRLFTLS*CPNTLS
Trigger: ACTAAGGGTGTTTGGGCAGCAGGATAGGGTGAAGAG...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CAA 90 bp CTGCAGTGCTATACGTGGCAGTGCCAGGGTTCAAACTGGGTTAGTTaGTCTCCAATATCTGTGCTTTTAATCACTATGCTAACATGTCTC +
Preference number: 2 (lower is better)
Translates to: LQCYTWQCQGSNWVS*SPISVLLITMLTCL
Trigger: GAGACATGTTAGCATAGTGATTAAAAGCACAGATATTGGAGACAAACTAACCCAGTTTGAACCCTGGCACTGCCACGTATAGCACTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
3UTR-3UTR TCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGTGGTTAGCCACATCCTaGGGATTGAAACTGGACCCC +
Preference number: 2 (lower is better)
Translates to: VQYNVSHEMVENYTKGYEWLATS*GLKLDP
Trigger: GGGGTCCAGTTTCAATCCTCAGGATGTGGCTAACCA...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR GCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTCAATACATGTCTACATaGCAGTCATTCCTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISQYMST*QSFLPN
Trigger: GTTGGGGAGGAATGACTGGCATGTAGACATGTATTG...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTGGCTTTGGGGTCACATaGACCTTAAATTTGGACCCT +
Preference number: 2 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPGFGVT*TLNLDP
Trigger: AGGGTCCAAATTTAAGGTCCATGTGACCCCAAAGCC...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR TCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAGATTTGGGGATTTCCTaGAGGGATCCCCTTTACTTT +
Preference number: 2 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRDLGIS*RDPLYF
Trigger: AAAGTAAAGGGGATCCCTTCAGGAAATCCCCAAATC...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGGCTTTGGGGTCACATaGACCTTAAATTTGGACCCT +
Preference number: 2 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCGFGVT*TLNLDP
Trigger: AGGGTCCAAATTTAAGGTCCATGTGACCCCAAAGCC...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR CCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGGGCTTTGGGGTCACATaGACCTTAAATTTGGACCCT +
Preference number: 2 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILGFGVT*TLNLDP
Trigger: AGGGTCCAAATTTAAGGTCCATGTGACCCCAAAGCC...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR CCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTTACCTCCACACAGGGTaGGAATATGGATTAAAGTGT +
Preference number: 2 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISYLHTG*EYGLKC
Trigger: ACACTTTAATCCATATTCCCACCCTGTGTGGAGGTA...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CAA 90 bp AGCTGTAACAAAGGGTATGTACTATGGAGTAGTGACAGAAGCCACTaGAAGATTTGGGGCCATACTTGCAGGTGTAAATGTGTTATGTTG +
Preference number: 2 (lower is better)
Translates to: SCNKGYVLWSSDRSH*KIWGHTCRCKCVML
Trigger: CAACATAACACATTTACACCTGCAAGTATGGCCCCAAATCTTCAAGTGGCTTCTGTCACTACTCCATAGTACATACCCTTTGTTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR TCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTCTGCCTCAAAGTTGCTaGGAAAATGAATTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISLPQSC*ENELLK
Trigger: CTTAAGCAATTCATTTTCTCAGCAACTTTGAGGCAG...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTCTAACACATGGAAGGTaGTTAAGACATTTTAGCCCC +
Preference number: 2 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPLTHGR*LRHFSP
Trigger: GGGGCTAAAATGTCTTAAGCACCTTCCATGTGTTAG...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR CCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAGCCACTTGAAGATTTaGGGCCATACTTGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: VQYNVSHEMVENYTKGYESHLKI*GHTCRC
Trigger: ACACCTGCAAGTATGGCCCCAAATCTTCAAGTGGCT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR TCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGCAAAGATCATGCTTATaGAGGTCTGAAATGCCCCAG +
Preference number: 2 (lower is better)
Translates to: VQYNVSHEMVENYTKGYEQRSCL*RSEMPQ
Trigger: CTGGGGCATTTCAGACCTTCATAAGCATGATCTTTG...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR TCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGATGGGCCAAAAGCATATaGAAAAATGCTGAACATCAC +
Preference number: 2 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRWAKSI*KNAEHH
Trigger: GTGATGTTCAGCATTTTTTCATATGCTTTTGGCCCA...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR GCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCTAACACATGGAAGGTaGTTAAGACATTTTAGCCCC +
Preference number: 2 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSLTHGR*LRHFSP
Trigger: GGGGCTAAAATGTCTTAAGCACCTTCCATGTGTTAG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR GCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCTAACACATGGAAGGTaGTTAAGACATTTTAGCCCC +
Preference number: 2 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCLTHGR*LRHFSP
Trigger: GGGGCTAAAATGTCTTAAGCACCTTCCATGTGTTAG...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR CCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTAACTTTGAGTACACTTaGACTCTAAGAAGGGAACAA +
Preference number: 2 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISNFEYT*TLRREQ
Trigger: TTGTTCCCTTCTTAGAGTCCAAGTGTACTCAAAGTT...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAAAATTAGCCAGGTGTaGTGGTGGCCACTTGTAATC +
Preference number: 2 (lower is better)
Translates to: VQYNVSHEMVENYTKGYEKISQV*WWPLVI
Trigger: GATTACAAGTGGCCACCACCACACCTGGCTAATTTT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR TCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAACAAAGCCAATAATTaGCAAGTGAAGGCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: VQYNVSHEMVENYTKGYENKANN*QVKAGH
Trigger: ATGCCCAGCCTTCACTTGTCAATTATTGGCTTTGTT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR TCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACCCACATCCTGAGGATTaGAACTGGACCCCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNPHPED*NWTPSF
Trigger: AAAAGAAGGGGTCCAGTTTCAATCCTCAGGATGTGG...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR GCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCTAACACATGGAAGGTaGTTAAGACATTTTAGCCCC +
Preference number: 2 (lower is better)
Translates to: NYSGVSITNRGMAFPLYILTHGR*LRHFSP
Trigger: GGGGCTAAAATGTCTTAAGCACCTTCCATGTGTTAG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR TCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCTTAAATTTGGACCCTaGCACTTACATATCCTCTAT +
Preference number: 2 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSLKFGP*HLHILY
Trigger: ATAGAGGATATGTAAGTGTCAGGGTCCAAATTTAAG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACTTAAATTTGGACCCTaGCACTTACATATCCTCTAT +
Preference number: 2 (lower is better)
Translates to: SQRGNNYSGVSITNRGMALKFGP*HLHILY
Trigger: ATAGAGGATATGTAAGTGTCAGGGTCCAAATTTAAG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR TCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAATGCTTATGAAGGTCTaGAATGCCCCAGCAAAACTG +
Preference number: 2 (lower is better)
Translates to: ISSSNLFSYPYINVKDFAMLMKV*NAPAKL
Trigger: CAGTTTTGCTGGGGCATTTCAGACCTTCATAAGCAT...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR GCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGAAGAGGGTCAGCGTATaGCAAGATATAAAAATTGGA +
Preference number: 2 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWKRVSV*QDIKIG
Trigger: TCCAATTTTTATATCTTGGCATACGCTGACCCTCTT...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
3UTR-3UTR GCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAGCAGAGAAAAGGGAATaGTATACACTGCTGATGGGA +
Preference number: 2 (lower is better)
Translates to: ISSSNLFSYPYINVKDFAAEKRE*YTLLMG
Trigger: TCCCATCAGCAGTGTATAGCATTCCCTTTTCTCTGC...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGTCACAAACAGAGGTATaGCATTTCCCTTGTATATTG +
Preference number: 2 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWSQTEV*HFPCIL
Trigger: CAATATACAAGGGAAATGCCATACCTCTGTTTGTGA...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
3UTR-3UTR GCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAGACATGCCCCAATATaGCTATTAAATCAATGGCAA +
Preference number: 2 (lower is better)
Translates to: VQYNVSHEMVENYTKGYERHAPI*LLNQWQ
Trigger: TTGCCATTGATTTAATAGGCATATTGGGGCATGTCT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAAGACACATAGACCAATaGAACAGGTTAGAGAACCCA +
Preference number: 2 (lower is better)
Translates to: ISSSNLFSYPYINVKDFARHIDQ*NRLENP
Trigger: TGGGTTCTCTAACCTGTTCCATTGGTCTATGTGTCT...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR GCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTCTTTACCATTTAGTCTaGATATTCCACTTGCAAGTG +
Preference number: 2 (lower is better)
Translates to: QPTLKLHKINSINTISHSLYHLV*IFHLQV
Trigger: CACTTGCAAGTGGAATATGCAGACTAAATGGTAAAG...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGTTCGGCATGTTTAATTaGCATGTGATGTTTAAAGGA +
Preference number: 2 (lower is better)
Translates to: VQYNVSHEMVENYTKGYEFGMFN*HVMFKG
Trigger: TCCTTTAAACATCACATGCCAATTAAACATGCCGAA...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAAACTCCAAAATGATTTaGGGATTTCCTGAAGGGATC +
Preference number: 2 (lower is better)
Translates to: ISSSNLFSYPYINVKDFANSKMI*GFPEGI
Trigger: GATCCCTTCAGGAAATCCCCAAATCATTTTGGAGTT...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CAA 90 bp TTAAGAAGCATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTaGATTAGGTTAGTAAACTACTCAGGTATGTTTCCAATCTGCAAA +
Preference number: 2 (lower is better)
Translates to: LRSIIKLNHTLFCLT*IRLVNYSGMFPICK
Trigger: TTTGCAGATTGGAAACATACCTGAGTAGTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTATGCTTCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CAA 90 bp ACTGATTTAAGAAGCATAATCAAGCTCAACCACACGCTATTTTGTTaGACCTTGATTAGGTTAGTAAACTACTCAGGTATGTTTCCAATC +
Preference number: 2 (lower is better)
Translates to: TDLRSIIKLNHTLFC*TLIRLVNYSGMFPI
Trigger: GATTGGAAACATACCTGAGTAGTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTATGCTTCTTAAATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR GCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTAAACTAAATAGCTTCTaGACAGCCAAAGAAACTATC +
Preference number: 2 (lower is better)
Translates to: QPTLKLHKINSINTISHSKLNSF*TAKETI
Trigger: GATAGTTTCTTTGGCTGTGCAGAAGCTATTTAGTTT...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTCAGATCAGACCTCAATaGAAAGTCATTAACCATTTT +
Preference number: 2 (lower is better)
Translates to: QPTLKLHKINSINTISHSQIRPQ*KVINHF
Trigger: AAAATGGTTAATGACTTTCCATTGAGGTCTGATCTG...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CCA 72 bp CTGCAGTGCTATACGTGGCAGTGCCAGGGTTCAAACTaGGTTAGTTTGTCTCCAATATCTGTGCTTTTAATC +
Preference number: 3 (lower is better)
Translates to: LQCYTWQCQGSN*VSLSPISVLLI
Trigger: GATTAAAAGCACAGATATTGGAGACAAACTAACCCAGTTTGAACCCTGGCACTGCCACGTATAGCACTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
3UTR TCA 72 bp AAGGGTATGTACTATGGAGTAGTGACAGAAGCCACTTaGAGATTTGGGGCCATACTTGCAGGTGTAAATGTG +
Preference number: 3 (lower is better)
Translates to: KGMYYGVVTEAT*RFGAILAGVNV
Trigger: CACATTTACACCTGCAAGTATGGCCCCAAATCTTCAAGTGGCTTCTGTCACTACTCCATAGTACATACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CCA 72 bp GTACTATGGAGTAGTGACAGAAGCCACTTGAAGATTTaGGGCCATACTTGCAGGTGTAAATGTGTTATGTTG +
Preference number: 3 (lower is better)
Translates to: VLWSSDRSHLKI*GHTCRCKCVML
Trigger: CAACATAACACATTTACACCTGCAAGTATGGCCCCAAATCTTCAAGTGGCTTCTGTCACTACTCCATAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTCTTTCTCTCCAACATTaGCTTCACTGCGACCTAATT +
Preference number: 3 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPLSLQH*LHCDLI
Trigger: AATTAGGTCGCAGTGAAGCAAATGTTGGAGAGAAAG...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR CAA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTTGTAAATGTGTTATGTaGAGGGGTTTGGACTGTTAC +
Preference number: 3 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISCKCVM*RGLDCY
Trigger: GTAACAGTCCAAACCCCTCAACATAACACATTTACA...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR TCA 72 bp AATAAATGGTGCTGGGATAACTGGTTAGCCACATCCTaGGGATTGAAACTGGACCCCTTCTTTTTACCATAT +
Preference number: 3 (lower is better)
Translates to: NKWCWDNWLATS*GLKLDPFFLPY
Trigger: ATATGGTAAAAAGAAGGGGTCCAGTTTCAATCCTCAGGATGTGGCTAACCAGTTATCCCAGCACCATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR GCA 72 bp CTGACTTCATGTGATAGGTCACAGTCAAAATGTAGGTaGACAACATATAGTCTATTCAGTGTTCCCAAGGGA +
Preference number: 3 (lower is better)
Translates to: LTSCDRSQSKCR*TTYSLFSVPKG
Trigger: TCCCTTGGGAACACTGAATAGACTATATGTTGTGCACCTACATTTTGACTGTGACCTATCACATGAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCTTTCTCTCCAACATTaGCTTCACTGCGACCTAATT +
Preference number: 3 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCLSLQH*LHCDLI
Trigger: AATTAGGTCGCAGTGAAGCAAATGTTGGAGAGAAAG...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGAATGGGCACAATGTTTaGTTCCTCCAGCAACAGAAA +
Preference number: 3 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWNGHNV*FLQQQK
Trigger: TTTCTGTTGCTGGAGGAACAAAACATTGTGCCCATT...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
3UTR-3UTR CAA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTCAGCGTCAAACAACCTaGGCAATTAAAACTAATTCA +
Preference number: 3 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISQRQTT*AIKTNS
Trigger: TGAATTAGTTTTAATTGCCAAGGTTGTTTGACGCTG...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAGGAGTGACCAGCTCTTaGATCTCTTCTCTTTTAAAA +
Preference number: 3 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRGVTSS*ISSLLK
Trigger: TTTTAAAAGAGAAGAGATCAAAGAGCTGGTCACTCC...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGGTGACTAGTCATCAGTaGGTCCAAAGCATACTATTA +
Preference number: 3 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMVTSHQ*VQSILL
Trigger: TAATAGTATGCTTTGGACCAACTGATGACTAGTCAC...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGACACACCTACAGCTACTaGATTTTTGTTAAAGTCAAC +
Preference number: 3 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRHTYSY*IFVKVN
Trigger: GTTGACTTTAACAAAAATCAAGTAGCTGTAGGTGTG...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGATTCCCAGATTTGCTATaGCCTCCTAAATGTGAAAAT +
Preference number: 3 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRFPDLL*PPKCEN
Trigger: ATTTTCACATTTAGGAGGCAATAGCAAATCTGGGAA...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR TCA 72 bp TGTCTAGTAGAACCAACCATTGAACACATCTGGCCCTaGCCTTCCCTATATGGAAAAATTTTAAACTACTGG +
Preference number: 3 (lower is better)
Translates to: CLVEPTIEHIWP*PSLYGKILNYW
Trigger: CCAGTAGTTTAAAATTTTTCCATATAGGGAAGGTCAGGGCCAGATGTGTTCAATGGTTGGTTCTACTAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR GCA 72 bp AATGCTCAGATCTTCCTAAATCAATACATGTCTACATaGCAGTCATTCCTCCCCAACACACCCATATTTAAC +
Preference number: 3 (lower is better)
Translates to: NAQIFLNQYMST*QSFLPNTPIFN
Trigger: GTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAGACATGTATTGATTTAGGAAGATCTGAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
3UTR-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGGGTATGGCATTTCCCTaGTATATTGTTCTGATCAAT +
Preference number: 3 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWGMAFP*YIVLIN
Trigger: ATTGATCAGAACAATATACAAGGGAAATGCCATACC...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
3UTR TCA 72 bp AGGCTTTGGGGTCACATGGACCTTAAATTTGGACCCTaGCACTTACATATCCTCTATAAAATTACAGTATCA +
Preference number: 3 (lower is better)
Translates to: RLWGHMDLKFGP*HLHILYKITVS
Trigger: TGATACTGTAATTTTATAGAGGATATGTAAGTGTCAGGGTCCAAATTTAAGGTCCATGTGACCCCAAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR GCA 72 bp AAAGGTATCTTGTCTCTCCCAAGACATGCCCCAATATaGCTATTAAATCAATGGCAAGTTATATCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: KGILSLPRHAPI*LLNQWQVISSW
Trigger: CCAACTTGATATAACTTGCCATTGATTTAATAGGCATATTGGGGCATGTCTTGGGAGAGACAAGATACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR GCA 72 bp CTCAGAATCAAAAGGTATCTTGTCTCTCCCAAGACATaGCCCAATATGCCTATTAAATCAATGGCAAGTTAT +
Preference number: 3 (lower is better)
Translates to: LRIKRYLVSPKT*PNMPIKSMASY
Trigger: ATAACTTGCCATTGATTTAATAGGCATATTGGGGCATGTCTTGGGAGAGACAAGATACCTTTTGATTCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CCA 72 bp ATGTCCCATGGATGCTTTAAAAGAATAGAGGTTCTGTaGCTGCTGAGTATATTGGTCATTCAGTATACTGTT +
Preference number: 3 (lower is better)
Translates to: MSHGCFKRIEVL*LLSILVIQYTV
Trigger: AACAGTATACTGAATGACCAATATACTCAGCAGCCACAGAACCTCTATTCTTTTAAAGCATCCATGGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACCTTTCTCTCCAACATTaGCTTCACTGCGACCTAATT +
Preference number: 3 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNLSLQH*LHCDLI
Trigger: AATTAGGTCGCAGTGAAGCAAATGTTGGAGAGAAAG...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTTCAAACTGGGTTAGTTaGTCTCCAATATCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: QPTLKLHKINSINTISHSSNWVS*SPISVL
Trigger: AAGCACAGATATTGGAGACAAACTAACCCAGTTTGA...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAGCTAGGCACCAGACATaGTTCTTAGTGTTTCATAAG +
Preference number: 3 (lower is better)
Translates to: ISSSNLFSYPYINVKDFAARHQT*FLVFHK
Trigger: CTTATGAAACACTAAGAACAATGTCTGGTGCCTAGC...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR TCA 72 bp GCTGAGAGGTCAAGTAACATATTATTGGTCATACAGTaGGCTGTAAGTGAAATGAAAAGATGCTGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: AERSSNILLVIQ*AVSEMKRCCLF
Trigger: AAACAAGCAGCATCTTTTCATTTCACTTACAGCTCACTGTATGACCAATAATATGTTACTTGACCTCTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CCA 72 bp ACAGAAAACCAAATACCAAATGTTCTTACTCATAAGTaGGAGCTGAACTTTGAGTACACTTGGACTCTAAGA +
Preference number: 3 (lower is better)
Translates to: TENQIPNVLTHK*ELNFEYTWTLR
Trigger: TCTTAGAGTCCAAGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTTTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR-3UTR CAA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTTCTGTGGAAAGCAGTTaGAAGATTTCTCAAAGAACT +
Preference number: 3 (lower is better)
Translates to: QPTLKLHKINSINTISHSSVESS*KISQRT
Trigger: AGTTCTTTGAGAAATCTTCAAACTGCTTTCCACAGA...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR TCA 72 bp CAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTaGTCAATAATTTCAAAAACAGGAAAGGGGGACAAT +
Preference number: 3 (lower is better)
Translates to: QTEVWHFPCILF*SIISKTGKGDN
Trigger: ATTGTCCCCCTTTCCTGTTTTTGAAATTATTGATCAGAACAATATACAAGGGAAATGCCATACCTCTGTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
3UTR TCA 72 bp ATACCTCCACACAGGGTGGGAATATGGATTAAAGTGTaGGATACTGACATAATAGATACTCAGAAAATGTTA +
Preference number: 3 (lower is better)
Translates to: IPPHRVGIWIKV*DTDIIDTQKML
Trigger: TAACATTTTCTGAGTATCTATTATGTCAGTATCTCACACTTTAATCCATATTCCCACCCTGTGTGGAGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR TCA 72 bp CCTCTACATGCTGCTTTAAGTGCATCCCACAAGTTTTaGTGTGTAGTATGGTTTAATATCATTGACTTAAAA +
Preference number: 3 (lower is better)
Translates to: PLHAALSASHKF*CVVWFNIIDLK
Trigger: TTTTAAGTCAATGATATTAAACCATACTACACATCAAAACTTGTGGGATGCACTTAAAGCAGCATGTAGAGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCAACCTTCCTCGGTCATaGCAAAGCGGTGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTNLPRS*QSGAMP
Trigger: AGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTT...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCAAAGAGAACCATGCCTaGATACAACCTTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTKENHA*IQPSSV
Trigger: GACCGAGGAAGGTTGTATCCAGGCATGGTTCTCTTT...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGGCACCATGGCCTACTTaGGGGTGGAGGGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWAPWPT*GWRVGE
Trigger: TTCTCCCACCCTCCACCCTCAAGTAGGCCATGGTGC...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAGAACTCCTGACCTCGTaGTCCACTCGTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRELLTS*STRLGL
Trigger: GAGGCCAAGACGAGTGGATCACGAGGTCAGGAGTTC...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTTGCTTGGCCCGTGGTTaGGGAATTCGTTGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSCLARG*GIRWRR
Trigger: CCTCCGCCAACGAATTCCTCAACCACGGGCCAAGCA...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS-3UTR TCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCGAATTCAGGCATCAATaGAAGTGTGCCTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTEFRHQ*KCAFSI
Trigger: GATGCTAAAGGCACACTTTCATTGATGCCTGAATTC...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCAGCAGACATACCATTTaGCCCAGCAATCCCATTATT +
Preference number: 4 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTSRHTI*PSNPII
Trigger: AATAATGGGATTGCTGGGTCAAATGGTATGTCTGCT...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCCTTGTCTTTAAGGCCTaGATAACTAAAATCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTLVFKA*ITKIRR
Trigger: CCTTCGGATTTTAGTTATGCAGGCCTTAAAGACAAG...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTGCCAAAGCGGTGCAATaGCTCCAACAATGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPAKAVQ*LQQCSL
Trigger: GAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGC...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTCCCTCCTCTTACTCTaGCTGTCCAAAGGCACGACA +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPSLLLL*LSKGTT
Trigger: TGTCGTGCCTTTGGACAGGCAGAGTAAGAGGAGGGA...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS-3UTR GCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTAAACTAGGGCGTCGTTaGCCTCCAGCACGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCKLGRR*PPARPK
Trigger: CTTTGGACGTGCTGGAGGGCAACGACGCCCTAGTTT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS-3UTR CCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCGCTGTTTCATCAATGTaGGAACCTTTCGTTTTGACA +
Preference number: 4 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTAVSSM*EPFVLT
Trigger: TGTCAAAACGAAAGGTTCCCACATTGATGAAACAGC...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTATTAGCCAGGTGTGGTaGTGGCCACTTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISISQVW*WPLVIP
Trigger: TGGGATTACAAGTGGCCACCACCACACCTGGCTAAT...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCCGTAATGCTGGACTTTaGAAACTGTTTTTAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTRNAGL*KLFLVS
Trigger: AGACACTAAAAACAGTTTTCAAAGTCCAGCATTACG...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGATTTGCACAACGCTGTaGGCATGCCCGGAAGCCTTA +
Preference number: 4 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMICTTL*ACPEAL
Trigger: TAAGGCTTCCGGGCATGCGCACAGCGTTGTGCAAAT...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTATTTGCACAACGCTGTaGGCATGCCCGGAAGCCTTA +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCICTTL*ACPEAL
Trigger: TAAGGCTTCCGGGCATGCGCACAGCGTTGTGCAAAT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000431332.7
CDS-3UTR GCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGGCCAAAGCGGTGCAATaGCTCCAACAATGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILAKAVQ*LQQCSL
Trigger: GAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGC...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGGCCAAAGCGGTGCAATaGCTCCAACAATGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWAKAVQ*LQQCSL
Trigger: GAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGC...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR GCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAGTCATGCCAAAGCGGTaGAATGCCTCCAACAATGCT +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRVMPKR*NASNNA
Trigger: AGCATTGTTGGAGGCATTGCACCGCTTTGGCATGAC...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGAACCTTCCTCGGTCATaGCAAAGCGGTGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILNLPRS*QSGAMP
Trigger: AGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTT...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAACCTTCCTCGGTCATaGCAAAGCGGTGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMANLPRS*QSGAMP
Trigger: AGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTAGTGAGCCAAGATCGTaGCACTGCACGGGTGATAGA +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCSEPRS*HCTGDR
Trigger: TCTATCACCCGTGCAGTGGCACGATCTTGGCTCACT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGACAACGCTGTGCGCATaGCCGGAAGCCTTAAGTGTT +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILTTLCA*PEALSV
Trigger: AACACTTAAGGCTTCCGGGCATGCGCACAGCGTTGT...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431332.7
CDS-3UTR CCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTAGTGCCTCGGTTCAGTaGAAGGCATTCATTTGCACA +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISSASVQ*KAFICT
Trigger: TGTGCAAATGAATGCCTTCCACTGAACCGAGGCACT...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTCTTGAGGGTGGAGGGTaGGAGAAAGATGAGGATAGA +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPLEGGG*EKDEDR
Trigger: TCTATCCTCATCTTTCTCCCACCCTCCACCCTCAAG...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCCCTAACTTCTTTAGATaGGTGCATAGCTACATAATG +
Preference number: 4 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTPNFFR*VHSYIM
Trigger: CATTATGTAGCTATGCACCCATCTAAAGAAGTTAGG...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTTGGGCGCAAAGGGTATaGATCCTCAATGCCAACCTC +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSWAQRV*ILNANL
Trigger: GAGGTTGGCATTGAGGATCCATACCCTTTGCGCCCA...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAGTTTGCTTGGCCCGTaGTTGAGGAATTCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMASLLGP*LRNSLA
Trigger: CGCCAACGAATTCCTCAACCACGGGCCAAGCAAACT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS-3UTR TCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTCAAAGTGATTTCCTTTaGGCTGACCAAGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPQSDFL*ADQVSG
Trigger: CCCTGAGACTTGGTCAGCTCAAAGGAAATCACTTTG...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTTGGTTAGCCACATCCTaGGGATTGAAACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIWLATS*GLKLDP
Trigger: GGGGTCCAGTTTCAATCCTCAGGATGTGGCTAACCA...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAGGTAGAGCCCATCTCTaGTTTCAGGGATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRGRAHL*FQGFST
Trigger: AGTTGAGAATCCCTGAAATCAGAGATGGGCTCTACC...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTGGAAAATTCCACACCTaGCTTCATGTGATAGGTCAC +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISGKFHT*LHVIGH
Trigger: GTGACCTATCACATGAAGTCAGGTGTGGAATTTTCC...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTTGAGGTCAGGAGTTTaGGACCAGCATGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCLRSGV*DQHGQH
Trigger: ATGTTGGCCATGCTGGTCTCAAACTCCTGACCTCAA...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTGGAAGGCATTCATTTaGACAACGCTGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCWKAFI*TTLCAC
Trigger: GCATGCGCACAGCGTTGTGCAAATGAATGCCTTCCA...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000431332.7
CDS-3UTR GCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCCAAAGCGGTGCAATaGCTCCAACAATGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIAKAVQ*LQQCSL
Trigger: GAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGC...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGGTCATGCCAAAGCGGTaGAATGCCTCCAACAATGCT +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWVMPKR*NASNNA
Trigger: AGCATTGTTGGAGGCATTGCACCGCTTTGGCATGAC...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR GCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAACCTTCCTCGGTCATaGCAAAGCGGTGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYINLPRS*QSGAMP
Trigger: AGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTATGTCATGGTACCACTaGCCTACTTTGTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPMSWYH*PTLFFG
Trigger: CCCGAAGAACAAAGTAGGGCAGTGGTACCATGACAT...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCTCTTCACCCTATCCTaGTGCCCAAACACCCTTAGT +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSLFTLS*CPNTLS
Trigger: ACTAAGGGTGTTTGGGCAGCAGGATAGGGTGAAGAG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTAAAGAGAACCATGCCTaGATACAACCTTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPKENHA*IQPSSV
Trigger: GACCGAGGAAGGTTGTATCCAGGCATGGTTCTCTTT...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAGTAATCCTAGCTCCTTaGGAGGCTGATACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRVILAP*EADTGE
Trigger: TTCTCCTGTATCAGCCTCCCAAGGAGCTAGGATTAC...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCACGTCACCTTTCTTTaGGCGCAAAGGGTATGGATC +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSHVTFL*AQRVWI
Trigger: GATCCATACCCTTTGCGCCCAAAGAAAGGTGACGTG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416848.6
3UTR CAA 72 bp ATAAGCAGAGATGTTCCAGCCAATGGGAATGGGAGGTaGAGGTGTATAACATGGGAACATTTGCTATTAGGC +
Preference number: 4 (lower is better)
Translates to: ISRDVPANGNGR*RCITWEHLLLG
Trigger: GCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCATTCCCATTGGCTGGAACATCTCTGCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACAAAGTGATTTCCTTTaGGCTGACCAAGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAQSDFL*ADQVSG
Trigger: CCCTGAGACTTGGTCAGCTCAAAGGAAATCACTTTG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTTGCATACATATTAGCTaGTCCCTCCTCTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISCIHIS*SLLFSY
Trigger: GTAACTGAAGAGGAGGGATCAGCTAATATGTATGCA...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTAACAAAGCCAATAATTaGCAAGTGAAGGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISNKANN*QVKAGH
Trigger: ATGCCCAGCCTTCACTTGTCAATTATTGGCTTTGTT...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCATGCCAAAGCGGTaGAATGCCTCCAACAATGCT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIVMPKR*NASNNA
Trigger: AGCATTGTTGGAGGCATTGCACCGCTTTGGCATGAC...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTACCCTGCACTACTCTTaGTCCATAGGTTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPTLHYS*SIGFKS
Trigger: AGACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGT...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAATGTCATGGTACCACTaGCCTACTTTGTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAMSWYH*PTLFFG
Trigger: CCCGAAGAACAAAGTAGGGCAGTGGTACCATGACAT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTATGTCATGGTACCACTaGCCTACTTTGTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSMSWYH*PTLFFG
Trigger: CCCGAAGAACAAAGTAGGGCAGTGGTACCATGACAT...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTCAATACATGTCTACATaGCAGTCATTCCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPQYMST*QSFLPN
Trigger: GTTGGGGAGGAATGACTGGCATGTAGACATGTATTG...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR GCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGAGATGTTGGGGAGGCTaGAGAGAAAAGGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWRCWGG*REKGML
Trigger: TAGCATTCCCTTTTCTCTGCAGCCTCCCCAACATCT...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTAAAGAGAACCATGCCTaGATACAACCTTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCKENHA*IQPSSV
Trigger: GACCGAGGAAGGTTGTATCCAGGCATGGTTCTCTTT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAAAGAGAACCATGCCTaGATACAACCTTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAKENHA*IQPSSV
Trigger: GACCGAGGAAGGTTGTATCCAGGCATGGTTCTCTTT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTCTGCTAAGTATGTCATaGTACCACTGCCCTACTTTG +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPLLSMS*YHCPTL
Trigger: CAAAGTAGGGCAGTGGTACCATGACATACTTAGCAG...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAGGCTTTGGGGTCACATaGACCTTAAATTTGGACCCT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAGFGVT*TLNLDP
Trigger: AGGGTCCAAATTTAAGGTCCATGTGACCCCAAAGCC...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTGGCTTTGGGGTCACATaGACCTTAAATTTGGACCCT +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSGFGVT*TLNLDP
Trigger: AGGGTCCAAATTTAAGGTCCATGTGACCCCAAAGCC...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAAAAATTAGCCAGGTGTaGTGGTGGCCACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRKISQV*WWPLVI
Trigger: GATTACAAGTGGCCACCACCACACCTGGCTAATTTT...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGGTGAGCCACCGTGCCTaGCCTAAATGGAAGTTAATA +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWVSHRA*PKWKLI
Trigger: TATTAACTTCCATTTAGGCCAGGCACGGTGGCTCAC...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCCAGCCAATGGGAATaGGAGGTTGAGGTGTATAAC +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILSSQWE*EVEVYN
Trigger: GTTATACACCTCAACCTCCCATTCCCATTGGCTGGA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CAA 72 bp AAAGGGTATGTACTATGGAGTAGTGACAGAAGCCACTaGAAGATTTGGGGCCATACTTGCAGGTGTAAATGT +
Preference number: 4 (lower is better)
Translates to: KGYVLWSSDRSH*KIWGHTCRCKC
Trigger: ACATTTACACCTGCAAGTATGGCCCCAAATCTTCAAGTGGCTTCTGTCACTACTCCATAGTACATACCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCAAAGTGATTTCCTTTaGGCTGACCAAGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIQSDFL*ADQVSG
Trigger: CCCTGAGACTTGGTCAGCTCAAAGGAAATCACTTTG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCTGCAAAAACCTAAGTaGCTAGTCATCAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILLQKPK*LVISWS
Trigger: GGACCAACTGATGACTAGTCACTTAGGTTTTTGCAG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCAAAGATCATGCTTATaGAGGTCTGAAATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSQRSCL*RSEMPQ
Trigger: CTGGGGCATTTCAGACCTTCATAAGCATGATCTTTG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCCACATCCTGAGGATTaGAACTGGACCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIPHPED*NWTPSF
Trigger: AAAAGAAGGGGTCCAGTTTCAATCCTCAGGATGTGG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGACTAGCTGAAATTTACTaGGAATTTGCTAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRLAEIY*EFARHQ
Trigger: CTGGTGCCTAGCAAATTCTCAGTAAATTTCAGCTAG...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTGTAAATGTGTTATGTTaGGGGGTTTGGACTGTTACT +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISVNVLC*GVWTVT
Trigger: AGTAACAGTCCAAACCCCTCAACATAACACATTTAC...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGACAGAAGCCACTTaGAGATTTGGGGCCATACTT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIVTEAT*RFGAIL
Trigger: AAGTATGGCCCCAAATCTTCAAGTGGCTTCTGTCAC...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTAGGTTCTGTGGCTGCTaGGTATATTGGTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCRFCGC*VYWSFS
Trigger: ACTGAATGACCAATATACTCAGCAGCCACAGAACCT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAGGCTGGCAGATCATTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ISSSNLFSYPYINVKDFAGWQII*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAATGATCTGCCAGCC...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp AACCAAATACCAAATGTTCTTACTCATAAGTGGGAGCTGAACTTTGAGTACACTTGGAAGGCATTCATTTaGACAACGCTGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: NQIPNVLTHKWELNFEYTWKAFI*TTLCAC
Trigger: GCATGCGCACAGCGTTGTGCAAATGAATGCCTTCCA...AGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCAATGCCTCCAACAATaGTCTCTCACGCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILQCLQQ*SLTHFE
Trigger: TTCAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACAATGCCTCCAACAATaGTCTCTCACGCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAQCLQQ*SLTHFE
Trigger: TTCAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGACCCTGCACTACTCTTaGTCCATAGGTTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMTLHYS*SIGFKS
Trigger: AGACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGT...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAACCCTGCACTACTCTTaGTCCATAGGTTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMATLHYS*SIGFKS
Trigger: AGACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCAATACATGTCTACATaGCAGTCATTCCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILQYMST*QSFLPN
Trigger: GTTGGGGAGGAATGACTGGCATGTAGACATGTATTG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR GCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAGTCTCTCCCAAGACATaGCCCAATATGCCTATTAAA +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRVSPKT*PNMPIK
Trigger: TTTAATAGGCATATTGGGGCATGTCTTGGGAGAGAC...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGAATATGCGCATGGAATaGGGTAAAGAGAACCATGCC +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWNMRME*GKENHA
Trigger: GGCATGGTTCTCTTTACCCCATTCCATGCGCATATT...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAATATGCGCATGGAATaGGGTAAAGAGAACCATGCC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMANMRME*GKENHA
Trigger: GGCATGGTTCTCTTTACCCCATTCCATGCGCATATT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTCATAGAATATGCGCATaGAATGGGGTAAAGAGAACC +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPHRICA*NGVKRT
Trigger: GGTTCTCTTTACCCCATTCCATGCGCATATTCTATG...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCTGCTAAGTATGTCATaGTACCACTGCCCTACTTTG +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILLLSMS*YHCPTL
Trigger: CAAAGTAGGGCAGTGGTACCATGACATACTTAGCAG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGGCTTTGGGGTCACATaGACCTTAAATTTGGACCCT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIGFGVT*TLNLDP
Trigger: AGGGTCCAAATTTAAGGTCCATGTGACCCCAAAGCC...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGTCTACCTCGGTTCAGTaGAAGGCATTCATTTGCACA +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWSTSVQ*KAFICT
Trigger: TGTGCAAATGAATGCCTTCCACTGAACCGAGGTAGA...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551923.5
3UTR CAA 72 bp TATACGTGGCAGTGCCAGGGTTCAAACTGGGTTAGTTaGTCTCCAATATCTGTGCTTTTAATCACTATGCTA +
Preference number: 4 (lower is better)
Translates to: YTWQCQGSNWVS*SPISVLLITML
Trigger: TAGCATAGTGATTAAAAGCACAGATATTGGAGACAAACTAACCCAGTTTGAACCCTGGCACTGCCACGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
3UTR CAA 72 bp TCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCTaGGCAATTAAAACTAATTCAAATATAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: SQALLLAQRQTT*AIKTNSNIAMR
Trigger: CCTCATTGCTATATTTGAATTAGTTTTAATTGCCAAGGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGAATTCAGGCATCAATaGAAGTGTGCCTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCEFRHQ*KCAFSI
Trigger: GATGCTAAAGGCACACTTTCATTGATGCCTGAATTC...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAGAATTCAGGCATCAATaGAAGTGTGCCTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAEFRHQ*KCAFSI
Trigger: GATGCTAAAGGCACACTTTCATTGATGCCTGAATTC...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCTCTCTCACGCACTTTaGATTCAGGCATCAATGAAA +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSLSHAL*IQASMK
Trigger: TTTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGCTCTCTCACGCACTTTaGATTCAGGCATCAATGAAA +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWLSHAL*IQASMK
Trigger: TTTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAG...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR TCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCTCTCTCACGCACTTTaGATTCAGGCATCAATGAAA +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILLSHAL*IQASMK
Trigger: TTTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATGCATACATATTAGCTaGTCCCTCCTCTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMACIHIS*SLLFSY
Trigger: GTAACTGAAGAGGAGGGATCAGCTAATATGTATGCA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTGCATACATATTAGCTaGTCCCTCCTCTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCCIHIS*SLLFSY
Trigger: GTAACTGAAGAGGAGGGATCAGCTAATATGTATGCA...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGCATACATATTAGCTaGTCCCTCCTCTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILCIHIS*SLLFSY
Trigger: GTAACTGAAGAGGAGGGATCAGCTAATATGTATGCA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAAGGCATCACACAACCTaGCATCAAACTAAACTACAA +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRRHHTT*HQTKLQ
Trigger: TTGTAGTTTAGTTTGATGTCAGGTTGTGTGATGCCT...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAAAAGCATAAAGAATTaGGTTCAACCCCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAKSIKN*VQPPPL
Trigger: GAGTGGAGGGGGTTGAACTCAATTCTTTATGCTTTT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTATACTGGAAAGCTTCTaGAATGTTCTATGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCILESF*NVLWPQ
Trigger: TTGGGGCCATAGAACATTTCAGAAGCTTTCCAGTAT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCAATGCCTCCAACAATaGTCTCTCACGCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIQCLQQ*SLTHFE
Trigger: TTCAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACTAACACATGGAAGGTaGTTAAGACATTTTAGCCCC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMALTHGR*LRHFSP
Trigger: GGGGCTAAAATGTCTTAAGCACCTTCCATGTGTTAG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTTTTCTCTTCCAAACTTaGATCTGCAGACACTTACTT +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISFLFQT*ICRHLL
Trigger: AAGTAAGTGTCTGCAGATGCAAGTTTGGAAGAGAAA...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAATTTGGGGCCATACTTaGAGGTGTAAATGTGTTATG +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRIWGHT*RCKCVM
Trigger: CATAACACATTTACACCTGCAAGTATGGCCCCAAAT...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAATATGCGCATGGAATaGGGTAAAGAGAACCATGCC +
Preference number: 4 (lower is better)
Translates to: VQYNVSHEMVENYTKGYENMRME*GKENHA
Trigger: GGCATGGTTCTCTTTACCCCATTCCATGCGCATATT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCATAGAATATGCGCATaGAATGGGGTAAAGAGAACC +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILHRICA*NGVKRT
Trigger: GGTTCTCTTTACCCCATTCCATGCGCATATTCTATG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACATAGAATATGCGCATaGAATGGGGTAAAGAGAACC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAHRICA*NGVKRT
Trigger: GGTTCTCTTTACCCCATTCCATGCGCATATTCTATG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCATAGAATATGCGCATaGAATGGGGTAAAGAGAACC +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSHRICA*NGVKRT
Trigger: GGTTCTCTTTACCCCATTCCATGCGCATATTCTATG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCTGCTAAGTATGTCATaGTACCACTGCCCTACTTTG +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYILLSMS*YHCPTL
Trigger: CAAAGTAGGGCAGTGGTACCATGACATACTTAGCAG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATGCCAGGGTTCAAACTaGGTTAGTTTGTCTCCAATA +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMACQGSN*VSLSPI
Trigger: TATTGGAGACAAACTAACCCAGTTTGAACCCTGGCA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
CDS-3UTR CCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTGCCAGGGTTCAAACTaGGTTAGTTTGTCTCCAATA +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCCQGSN*VSLSPI
Trigger: TATTGGAGACAAACTAACCCAGTTTGAACCCTGGCA...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
CDS-3UTR CCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTAGACACATAGACCAATaGAACAGGTTAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCRHIDQ*NRLENP
Trigger: TGGGTTCTCTAACCTGTTCCATTGGTCTATGTGTCT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATACCTCCACACAGGGTaGGAATATGGATTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAYLHTG*EYGLKC
Trigger: ACACTTTAATCCATATTCCCACCCTGTGTGGAGGTA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTTTGAGGTGTATAACATaGGAACATTTGCTATTAGGC +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISLRCIT*EHLLLG
Trigger: GCCTAATAGCAAATGTTCCCATGTTATACACCTCAA...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGAGAATAGAGGTTCTGTaGCTGCTGAGTATATTGGTC +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWRIEVL*LLSILV
Trigger: GACCAATATACTCAGCAGCCACAGAACCTCTATTCT...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTAAAGTAAGAAACAGGTaGGGGGACTCTTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISKVRNR*GDSSLF
Trigger: AAATAAAGAAGAGTCCCCCCACCTGTTTCTTACTTT...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTAATAAAGTCACTTGGTaGGCTTTTTATAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPNKVTW*AFYSAM
Trigger: CATGGCACTATAAAAAGCTCACCAAGTGACTTTATT...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAGGGAACCTTTCGTTTTaGCATCAATGTCATGATCTT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAGNLSF*HQCHDL
Trigger: AAGATCATGACATTGATGTCAAAACGAAAGGTTCCC...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGGGAACCTTTCGTTTTaGCATCAATGTCATGATCTT +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCGNLSF*HQCHDL
Trigger: AAGATCATGACATTGATGTCAAAACGAAAGGTTCCC...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGAACGGTAGCATAGCATaGAGCATCAAGATCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWNGSIA*SIKIKR
Trigger: TCTTTTGATCTTGATGCTTCATGCTATGCTACCGTT...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR TCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTCTTAAATTTGGACCCTaGCACTTACATATCCTCTAT +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPLKFGP*HLHILY
Trigger: ATAGAGGATATGTAAGTGTCAGGGTCCAAATTTAAG...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp AACCAAATACCAAATGTTCTTACTCATAAGTGGGAGCTGAACTTTGAGTACACTATGCTTATGAAGGTCTaGAATGCCCCAGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: NQIPNVLTHKWELNFEYTMLMKV*NAPAKL
Trigger: CAGTTTTGCTGGGGCATTTCAGACCTTCATAAGCAT...AGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATGGGCCAAAAGCATATaGAAAAATGCTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAWAKSI*KNAEHH
Trigger: GTGATGTTCAGCATTTTTTCATATGCTTTTGGCCCA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAATCAACAGAGTAAACTaGCAATCTACAGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAINRVN*QSTEWE
Trigger: CTCCCATTCTGTAGATTGTCAGTTTACTCTGTTGAT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp AACCAAATACCAAATGTTCTTACTCATAAGTGGGAGCTGAACTTTGAGTACACTGATTTGGGGATTTCCTaGAGGGATCCCCTTTACTTT +
Preference number: 4 (lower is better)
Translates to: NQIPNVLTHKWELNFEYTDLGIS*RDPLYF
Trigger: AAAGTAAAGGGGATCCCTTCAGGAAATCCCCAAATC...AGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAGGCATTGGAAACAATaGTCAGCTCAGATTAAAACC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMARHWKQ*SAQIKT
Trigger: GGTTTTAATCTGAGCTGATCATTGTTTCCAATGCCT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTCAACCTGTATTTGTaGAACAGCTGTAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAFNLYL*NSCNKG
Trigger: CCCTTTGTTACAGCTGTTTCACAAATACAGGTTGAA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGATACAATGTGAGCCATaGGATGGTAGAGAACTATAC +
Preference number: 4 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMIQCEP*DGRELY
Trigger: GTATAGTTCTCTACCATCTCATGGCTCACATTGTAT...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCATGGCCAACATGGTaGAATCCCATCTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIAWPTW*NPISNK
Trigger: TTTATTAGAGATGGGATTTCACCATGTTGGCCATGC...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGATTTTGTCAAGGATTCTaGCTATTGAGAATTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRFCQGF*LLRIQE
Trigger: CTCCTGAATTCTCAATAGGCAGAATCCTTGACAAAA...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGCTTGTCTTTAAGGCCTaGATAACTAAAATCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWLVFKA*ITKIRR
Trigger: CCTTCGGATTTTAGTTATGCAGGCCTTAAAGACAAG...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR GCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCTTGTCTTTAAGGCCTaGATAACTAAAATCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSLVFKA*ITKIRR
Trigger: CCTTCGGATTTTAGTTATGCAGGCCTTAAAGACAAG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCTTGTCTTTAAGGCCTaGATAACTAAAATCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCLVFKA*ITKIRR
Trigger: CCTTCGGATTTTAGTTATGCAGGCCTTAAAGACAAG...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACATGTCATGGTACCACTaGCCTACTTTGTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNMSWYH*PTLFFG
Trigger: CCCGAAGAACAAAGTAGGGCAGTGGTACCATGACAT...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTAAGAGGGTCAGCGTATaGCAAGATATAAAAATTGGA +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPKRVSV*QDIKIG
Trigger: TCCAATTTTTATATCTTGGCATACGCTGACCCTCTT...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR GCA 90 bp AACCAAATACCAAATGTTCTTACTCATAAGTGGGAGCTGAACTTTGAGTACACTCAATACATGTCTACATaGCAGTCATTCCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: NQIPNVLTHKWELNFEYTQYMST*QSFLPN
Trigger: GTTGGGGAGGAATGACTGGCATGTAGACATGTATTG...AGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTTCTCCCTCTACATGCTaGTTTAAGTGCATCCCACAA +
Preference number: 4 (lower is better)
Translates to: QPTLKLHKINSINTISHSSPSTC*FKCIPQ
Trigger: TTGTGGGATGCACTTAAAGCAGCATGTAGAGGGAGA...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATGTAAACTAGCCCTCTaGTTTTTGTCAAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMACKLAL*FLSRIL
Trigger: CAGAATCCTTGACAAAAACCAGAGGGCTAGTTTACA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTTGGACAGCTTTTCTGTaGTCTTTGTTTGTATCAGGT +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSWTAFL*SLFVSG
Trigger: ACCTGATACAAACAAAGACCACAGAAAAGCTGTCCA...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATGGACAGCTTTTCTGTaGTCTTTGTTTGTATCAGGT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAWTAFL*SLFVSG
Trigger: ACCTGATACAAACAAAGACCACAGAAAAGCTGTCCA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGGCTGTTTCATCAATGTaGGAACCTTTCGTTTTGACA +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWAVSSM*EPFVLT
Trigger: TGTCAAAACGAAAGGTTCCCACATTGATGAAACAGC...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGCTGTTTCATCAATGTaGGAACCTTTCGTTTTGACA +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCAVSSM*EPFVLT
Trigger: TGTCAAAACGAAAGGTTCCCACATTGATGAAACAGC...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGGCTGTTTCATCAATGTaGGAACCTTTCGTTTTGACA +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILAVSSM*EPFVLT
Trigger: TGTCAAAACGAAAGGTTCCCACATTGATGAAACAGC...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGAAAAATAACAGATGTTaGGGAGGCTGCAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMKNNRC*GGCREK
Trigger: CTTTTCTCTGCAGCCTCCCCAACATCTGTTATTTTT...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGAACTCCAAAATGATTTaGGGATTTCCTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILNSKMI*GFPEGI
Trigger: GATCCCTTCAGGAAATCCCCAAATCATTTTGGAGTT...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACAGCCACTTGAAGATTTaGGGCCATACTTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNSHLKI*GHTCRC
Trigger: ACACCTGCAAGTATGGCCCCAAATCTTCAAGTGGCT...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAAAGGGTATGTACTATaGAGTAGTGACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIKGYVL*SSDRSH
Trigger: GTGGCTTCTGTCACTACTCCATAGTACATACCCTTT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAAAAGCTCGGTTCAGTaGAAGGCATTCATTTGCACA +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIKSSVQ*KAFICT
Trigger: TGTGCAAATGAATGCCTTCCACTGAACCGAGCTTTT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431332.7
CDS-3UTR TCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTAATAAAGTCACTTGGTaGGCTTTTTATAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCNKVTW*AFYSAM
Trigger: CATGGCACTATAAAAAGCTCACCAAGTGACTTTATT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR TCA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGAGTATCTTCCTTTTCTaGACCAGACTGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMSIFLF*TRLMIL
Trigger: CAAAATCATCAGTCTGGTTCAGAAAAGGAAGATACT...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAACTGGAAGAACCACCTaGTGTATTGCATACATATTA +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMATGRTT*CIAYIL
Trigger: TAATATGTATGCAATACATCAGGTGGTTCTTCCAGT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGACTGGAAGAACCACCTaGTGTATTGCATACATATTA +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILTGRTT*CIAYIL
Trigger: TAATATGTATGCAATACATCAGGTGGTTCTTCCAGT...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTACTGGAAGAACCACCTaGTGTATTGCATACATATTA +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCTGRTT*CIAYIL
Trigger: TAATATGTATGCAATACATCAGGTGGTTCTTCCAGT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTGTTCTTCGGGTACTaGATATTGTATCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMALFFGY*ILYPST
Trigger: AGTACTTGGATACAATATTCAGTACCCGAAGAACAA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGTTGTTCTTCGGGTACTaGATATTGTATCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWLFFGY*ILYPST
Trigger: AGTACTTGGATACAATATTCAGTACCCGAAGAACAA...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGGGAACCTTTCGTTTTaGCATCAATGTCATGATCTT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIGNLSF*HQCHDL
Trigger: AAGATCATGACATTGATGTCAAAACGAAAGGTTCCC...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAACGGTAGCATAGCATaGAGCATCAAGATCAAAAGA +
Preference number: 4 (lower is better)
Translates to: VQYNVSHEMVENYTKGYENGSIA*SIKIKR
Trigger: TCTTTTGATCTTGATGCTTCATGCTATGCTACCGTT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAACGGTAGCATAGCATaGAGCATCAAGATCAAAAGA +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYINGSIA*SIKIKR
Trigger: TCTTTTGATCTTGATGCTTCATGCTATGCTACCGTT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGCGTAATGCTGGACTTTaGAAACTGTTTTTAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWRNAGL*KLFLVS
Trigger: AGACACTAAAAACAGTTTTCAAAGTCCAGCATTACG...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
CDS-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTTTTCTAACAACCATTaGTTGATAGGTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPFSNNH*LIGDGF
Trigger: AAAGCCATCACCTATCAAGCAATGGTTGTTAGAAAA...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCCTCATTCCAAATTTTaGTGGTATATGCGTGAACAT +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCPHSKF*WYMREH
Trigger: ATGTTCACGCATATACCAGCAAAATTTGGAATGAGG...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCCTCATTCCAAATTTTaGTGGTATATGCGTGAACAT +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILPHSKF*WYMREH
Trigger: ATGTTCACGCATATACCAGCAAAATTTGGAATGAGG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACCTCATTCCAAATTTTaGTGGTATATGCGTGAACAT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAPHSKF*WYMREH
Trigger: ATGTTCACGCATATACCAGCAAAATTTGGAATGAGG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGCCTCATTCCAAATTTTaGTGGTATATGCGTGAACAT +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWPHSKF*WYMREH
Trigger: ATGTTCACGCATATACCAGCAAAATTTGGAATGAGG...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR GCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTAAGTCTGTAAGATACTaGCTCATTCCAAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPKSVRY*LIPNFA
Trigger: AGCAAAATTTGGAATGAGGCAGTATCTTACAGACTT...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTTCTCTTCCAAACTTaGATCTGCAGACACTTACTT +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILFLFQT*ICRHLL
Trigger: AAGTAAGTGTCTGCAGATGCAAGTTTGGAAGAGAAA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
CDS-3UTR GCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTAGACATGCCCCAATATaGCTATTAAATCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSRHAPI*LLNQWQ
Trigger: TTGCCATTGATTTAATAGGCATATTGGGGCATGTCT...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAGAAGGATTTCTTGGTTaGAAAGCAGTCTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAEGFLG*KAVFYL
Trigger: AAGATAGAAGACTGCTTTGCAACCAAGAAATCCTTC...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGATAACTTTTCCTTCTTaGCATTCAGAAAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWITFPS*HSERGL
Trigger: AAGGCCTCTTTCTGAATGCCAAGAAGGAAAAGTTAT...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAATAACTTTTCCTTCTTaGCATTCAGAAAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAITFPS*HSERGL
Trigger: AAGGCCTCTTTCTGAATGCCAAGAAGGAAAAGTTAT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTATAACTTTTCCTTCTTaGCATTCAGAAAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCITFPS*HSERGL
Trigger: AAGGCCTCTTTCTGAATGCCAAGAAGGAAAAGTTAT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTATTTTTCAACCTCTCTaGAGTCACTTTTCTAACAAC +
Preference number: 4 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPIFQPL*SHFSNN
Trigger: GTTGTTAGAAAAGTGACTCCAGAGAGGTTGAAAAAT...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTATTGTATCCAAGTACTaGAAGAACCACCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCIVSKY*KNHLMY
Trigger: ATACATCAGGTGGTTCTTCCAGTACTTGGATACAAT...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCACTGCTAAGTATGTCATaGTACCACTGCCCTACTTTG +
Preference number: 4 (lower is better)
Translates to: ISSSNLFSYPYINVKDFALLSMS*YHCPTL
Trigger: CAAAGTAGGGCAGTGGTACCATGACATACTTAGCAG...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCTGTCTATAGCAACCTaGTATATTCAGTTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILLSIAT*YIQFQS
Trigger: ACTCTGAAACTGAATATACCAGGTTGCTATAGACAG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCTGTCTATAGCAACCTaGTATATTCAGTTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSLSIAT*YIQFQS
Trigger: ACTCTGAAACTGAATATACCAGGTTGCTATAGACAG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATCACAAACAGAGGTATaGCATTTCCCTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMASQTEV*HFPCIL
Trigger: CAATATACAAGGGAAATGCCATACCTCTGTTTGTGA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCACAAACAGAGGTATaGCATTTCCCTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILSQTEV*HFPCIL
Trigger: CAATATACAAGGGAAATGCCATACCTCTGTTTGTGA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGTTTAAGGATTTAGAATaGAGTGCTGAGAGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWFKDLE*SAERSS
Trigger: ACTTGACCTCTCAGCACTCCATTCTAAATCCTTAAA...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTTTCTTTTGTAAGAGATaGCCTATGTACACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIFFCKR*PMYTGR
Trigger: TCTGCCTGTGTACATAGGCCATCTCTTACAAAAGAA...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAATAAAGTCACTTGGTaGGCTTTTTATAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: VQYNVSHEMVENYTKGYENKVTW*AFYSAM
Trigger: CATGGCACTATAAAAAGCTCACCAAGTGACTTTATT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAGTATCTTCCTTTTCTaGACCAGACTGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYISIFLF*TRLMIL
Trigger: CAAAATCATCAGTCTGGTTCAGAAAAGGAAGATACT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR TCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTTTGTTCTTCGGGTACTaGATATTGTATCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYILFFGY*ILYPST
Trigger: AGTACTTGGATACAATATTCAGTACCCGAAGAACAA...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR TCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACACGGAAGAAAGGACATaGACAGACACTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNTEERT*TDTSQK
Trigger: CTTTTGAGAAGTGTCTGTTCATGTCCTTTCTTCCGT...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACCTCAAAATGTTGTCATaGGCCACCAAAACCATTCTG +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNLKMLS*ATKTIL
Trigger: CAGAATGGTTTTGGTGGCTCATGACAACATTTTGAG...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTCTGCCTCAAAGTTGCTaGGAAAATGAATTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: QPTLKLHKINSINTISHSLPQSC*ENELLK
Trigger: CTTAAGCAATTCATTTTCTCAGCAACTTTGAGGCAG...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTTTCTAACAACCATTaGTTGATAGGTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILFSNNH*LIGDGF
Trigger: AAAGCCATCACCTATCAAGCAATGGTTGTTAGAAAA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAATTTTGCTGGTATATaGGTGAACATAGAATATGCG +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMANFAGI*VNIEYA
Trigger: CGCATATTCTATGTTCACGCATATACCAGCAAAATT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAAGTCTGTAAGATACTaGCTCATTCCAAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAKSVRY*LIPNFA
Trigger: AGCAAAATTTGGAATGAGGCAGTATCTTACAGACTT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAAGAGGGTCAGCGTATaGCAAGATATAAAAATTGGA +
Preference number: 4 (lower is better)
Translates to: VQYNVSHEMVENYTKGYEKRVSV*QDIKIG
Trigger: TCCAATTTTTATATCTTGGCATACGCTGACCCTCTT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGTTGGTTAGTTGTAACTaGATTATTTCCATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMLVSCN*IISISL
Trigger: GAGACTGATGGAAATAATGCAGTTACAACTAACCAA...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp AACCAAATACCAAATGTTCTTACTCATAAGTGGGAGCTGAACTTTGAGTACACTTGTAAACTAGCCCTCTaGTTTTTGTCAAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: NQIPNVLTHKWELNFEYTCKLAL*FLSRIL
Trigger: CAGAATCCTTGACAAAAACCAGAGGGCTAGTTTACA...AGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTATTTTTCAACCTCTCTaGAGTCACTTTTCTAACAAC +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSIFQPL*SHFSNN
Trigger: GTTGTTAGAAAAGTGACTCCAGAGAGGTTGAAAAAT...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAATTTTTCAACCTCTCTaGAGTCACTTTTCTAACAAC +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAIFQPL*SHFSNN
Trigger: GTTGTTAGAAAAGTGACTCCAGAGAGGTTGAAAAAT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCATTCCAAATTTTGCTaGTATATGCGTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSHSKFC*YMREHR
Trigger: TCTATGTTCACGCATATACCAGCAAAATTTGGAATG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGCATTCCAAATTTTGCTaGTATATGCGTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWHSKFC*YMREHR
Trigger: TCTATGTTCACGCATATACCAGCAAAATTTGGAATG...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACATTCCAAATTTTGCTaGTATATGCGTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAHSKFC*YMREHR
Trigger: TCTATGTTCACGCATATACCAGCAAAATTTGGAATG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTATTGTATCCAAGTACTaGAAGAACCACCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIIVSKY*KNHLMY
Trigger: ATACATCAGGTGGTTCTTCCAGTACTTGGATACAAT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCTGTCTATAGCAACCTaGTATATTCAGTTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYILSIAT*YIQFQS
Trigger: ACTCTGAAACTGAATATACCAGGTTGCTATAGACAG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTTTCGGCATGTTTAATTaGCATGTGATGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSFGMFN*HVMFKG
Trigger: TCCTTTAAACATCACATGCCAATTAAACATGCCGAA...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAATGTTTTCAATGCATTaGGATAATGCTCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAMFSMH*DNALPT
Trigger: AGTTGGAAGAGCATTATCCCAATGCATTGAAAACAT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTTACTGCATAGATACTaGAAAGCTTCTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCLLHRY*KASEMF
Trigger: GAACATTTCAGAAGCTTTCCAGTATCTATGCAGTAA...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CAA 72 bp AGAAGCATAATCAAGCTCAACCACACGCTATTTTGTTaGACCTTGATTAGGTTAGTAAACTACTCAGGTATG +
Preference number: 4 (lower is better)
Translates to: RSIIKLNHTLFC*TLIRLVNYSGM
Trigger: CATACCTGAGTAGTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTATGCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTACTGGAAGAACCACCTaGTGTATTGCATACATATTA +
Preference number: 4 (lower is better)
Translates to: QPTLKLHKINSINTISHSTGRTT*CIAYIL
Trigger: TAATATGTATGCAATACATCAGGTGGTTCTTCCAGT...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAAACGTTAAGGAACATTaGCCTAGACAGCTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: ISSSNLFSYPYINVKDFANVKEH*PRQLLK
Trigger: CTTTAAGAGCTGTCTAGGTCAATGTTCCTTAACGTT...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACACAGTGAGCTGTAAGTaGAATGAAAAGATGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNTVSCK*NEKMLL
Trigger: AAGCAGCATCTTTTCATTTCACTTACAGCTCACTGT...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTGCATCCCACAAGTTTTaGTGTGTAGTATGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: QPTLKLHKINSINTISHSASHKF*CVVWFN
Trigger: ATTAAACCATACTACACATCAAAACTTGTGGGATGC...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAAGTCTGTAAGATACTaGCTCATTCCAAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIKSVRY*LIPNFA
Trigger: AGCAAAATTTGGAATGAGGCAGTATCTTACAGACTT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR GCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAAACTAAATAGCTTCTaGACAGCCAAAGAAACTATC +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIKLNSF*TAKETI
Trigger: GATAGTTTCTTTGGCTGTGCAGAAGCTATTTAGTTT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp AACCAAATACCAAATGTTCTTACTCATAAGTGGGAGCTGAACTTTGAGTACACTCTTTACCATTTAGTCTaGATATTCCACTTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: NQIPNVLTHKWELNFEYTLYHLV*IFHLQV
Trigger: CACTTGCAAGTGGAATATGCAGACTAAATGGTAAAG...AGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCAGTCAAAATGTAGGTaGACAACATATAGTCTATTC +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIQSKCR*TTYSLF
Trigger: GAATAGACTATATGTTGTGCACCTACATTTTGACTG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGATTTTTCAACCTCTCTaGAGTCACTTTTCTAACAAC +
Preference number: 4 (lower is better)
Translates to: VQYNVSHEMVENYTKGYEIFQPL*SHFSNN
Trigger: GTTGTTAGAAAAGTGACTCCAGAGAGGTTGAAAAAT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCATTCCAAATTTTGCTaGTATATGCGTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIHSKFC*YMREHR
Trigger: TCTATGTTCACGCATATACCAGCAAAATTTGGAATG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTAACTTTGAGTACACTTaGACTCTAAGAAGGGAACAA +
Preference number: 4 (lower is better)
Translates to: QPTLKLHKINSINTISHSNFEYT*TLRREQ
Trigger: TTGTTCCCTTCTTAGAGTCCAAGTGTACTCAAAGTT...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACTTAAGATATAGCATGTaGTCATCAATGCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNLRYSM*SSMPLL
Trigger: GAGCAGAGGCATTGATGACCACATGCTATATCTTAA...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAACTTCTTCAAGCCCTaGAATCCTCATTTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: NYSGVSITNRGMAFPLYINFFKP*NPHLLN
Trigger: ATTTAACAAATGAGGATTCCAGGGCTTGAAGAAGTT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR TCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAACTATGCTTTTTCAATaGTATTTGTGCCAGGTACCA +
Preference number: 4 (lower is better)
Translates to: ISSSNLFSYPYINVKDFATMLFQ*YLCQVP
Trigger: TGGTACCTGGCACAAATATCATTGAAAAAGCATAGT...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTTTTTCTAACAACCATTaGTTGATAGGTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: QPTLKLHKINSINTISHSFSNNH*LIGDGF
Trigger: AAAGCCATCACCTATCAAGCAATGGTTGTTAGAAAA...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTAATTTTGCTGGTATATaGGTGAACATAGAATATGCG +
Preference number: 4 (lower is better)
Translates to: QPTLKLHKINSINTISHSNFAGI*VNIEYA
Trigger: CGCATATTCTATGTTCACGCATATACCAGCAAAATT...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACGCTAAACTCCATCCTTaGAACAGGAGTTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNAKLHP*NRSFIS
Trigger: AGAAATAAAACTCCTGTTGCAAGGATGGAGTTTAGC...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAATTGTATCCAAGTACTaGAAGAACCACCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: ISSSNLFSYPYINVKDFAIVSKY*KNHLMY
Trigger: ATACATCAGGTGGTTCTTCCAGTACTTGGATACAAT...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCACTGTCTATAGCAACCTaGTATATTCAGTTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ISSSNLFSYPYINVKDFALSIAT*YIQFQS
Trigger: ACTCTGAAACTGAATATACCAGGTTGCTATAGACAG...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACTCACAAACAGAGGTATaGCATTTCCCTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNSQTEV*HFPCIL
Trigger: CAATATACAAGGGAAATGCCATACCTCTGTTTGTGA...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTTCACACCAGTCAGAATaGCTGTTATTAAAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: QPTLKLHKINSINTISHSSHQSE*LLLKSQ
Trigger: TTGACTTTTTAATAACAGCCATTCTGACTGGTGTGA...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp AACCAAATACCAAATGTTCTTACTCATAAGTGGGAGCTGAACTTTGAGTACACTCAACAAACCAACTTTTaGATTTGTAGATCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: NQIPNVLTHKWELNFEYTQQTNF*ICRSSL
Trigger: AAGAGACGATCTACAAATCCAAAAGTTGGTTTGTTG...AGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp AACCAAATACCAAATGTTCTTACTCATAAGTGGGAGCTGAACTTTGAGTACACTTTAGGAATGAATACATaGGTGGTAAAGCTATCAAGA +
Preference number: 4 (lower is better)
Translates to: NQIPNVLTHKWELNFEYTLGMNT*VVKLSR
Trigger: TCTTGATAGCTTTACCACCCATGTATTCATTCCTAA...AGTGTACTCAAAGTTCAGCTCCCACTTATGAGTAAGAACATTTGGTATTTGGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CAA 72 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTaGATTAGGTTAGTAAACTACTCAGGTATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLT*IRLVNYSGMFP
Trigger: TGGAAACATACCTGAGTAGTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
3UTR CAA 72 bp AAAGCAGACATACCATTTGACCCAGCAATCCCATTATaGGTTATATACCCAAAGGAATATAAATTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: KADIPFDPAIPL*VIYPKEYKLFY
Trigger: GTAGAACAATTTATATTCCTTTGGGTATATAACCAATAATGGGATTGCTGGGTCAAATGGTATGTCTGCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR GCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACAAGTCTGTAAGATACTaGCTCATTCCAAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNKSVRY*LIPNFA
Trigger: AGCAAAATTTGGAATGAGGCAGTATCTTACAGACTT...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CCA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACCAGATCAGACCTCAATaGAAAGTCATTAACCATTTT +
Preference number: 4 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNQIRPQ*KVINHF
Trigger: AAAATGGTTAATGACTTTCCATTGAGGTCTGATCTG...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS CCA 90 bp CTCTGCCTGTCCAAAGGCACGACACTAGTCCACGTCACCTTTCTTTaGGCGCAAAGGGTATGGATCCTCAATGCCAACCTCGTCACCCCC +
Preference number: 5 (lower is better)
Translates to: LCLSKGTTLVHVTFL*AQRVWILNANLVTP
Trigger: GGGGGTGACGAGGTTGGCATTGAGGATCCATACCCTTTGCGCCCAAAGAAAGGTGACGTGGACTAGTGTCGTGCCTTTGGACAGGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS GCA 90 bp GAGAACCATGCCTGGATACAACCTTCCTCGGTCATGCCAAAGCGGTaGAATGCCTCCAACAATGCTCTCTCACGCACTTTGAATTCAGGC +
Preference number: 5 (lower is better)
Translates to: ENHAWIQPSSVMPKR*NASNNALSRTLNSG
Trigger: GCCTGAATTCAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTTGTATCCAGGCATGGTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS GCA 90 bp CCATGCCTGGATACAACCTTCCTCGGTCATGCCAAAGCGGTGCAATaGCTCCAACAATGCTCTCTCACGCACTTTGAATTCAGGCATCAA +
Preference number: 5 (lower is better)
Translates to: PCLDTTFLGHAKAVQ*LQQCSLTHFEFRHQ
Trigger: TTGATGCCTGAATTCAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTTGTATCCAGGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS GCA 90 bp AATGGGGTAAAGAGAACCATGCCTGGATACAACCTTCCTCGGTCATaGCAAAGCGGTGCAATGCCTCCAACAATGCTCTCTCACGCACTT +
Preference number: 5 (lower is better)
Translates to: NGVKRTMPGYNLPRS*QSGAMPPTMLSHAL
Trigger: AAGTGCGTGAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTTGTATCCAGGCATGGTTCTCTTTACCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGGGGCGGGGGAGTAGTTaGCTTGGCCCGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILGRGSS*LGPWLR
Trigger: CCTCAACCACGGGCCAAGCAAACTACTCCCCCGCCC...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS-3UTR CAA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGGCACCATGGCCTACTaGAGGGTGGAGGGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCGTMAY*RVEGGR
Trigger: TCTCCCACCCTCCACCCTCAAGTAGGCCATGGTGCC...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCGAATCAAAAGGTATCTaGTCTCTCCCAAGACATGCC +
Preference number: 5 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTESKGI*SLPRHA
Trigger: GGCATGTCTTGGGAGAGACAAGATACCTTTTGATTC...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCACCAGACTGATGATTTaGGTCACCATCAGTGTACTT +
Preference number: 5 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTTRLMI*VTISVL
Trigger: AAGTACACTGATGGTGACCAAAATCATCAGTCTGGT...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCAAGCAGACATACCATTaGACCCAGCAATCCCATTAT +
Preference number: 5 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTKQTYH*TQQSHY
Trigger: ATAATGGGATTGCTGGGTCAAATGGTATGTCTGCTT...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCGTTATGTTGAGGGGTTaGGACTGTTACTGCATAGAT +
Preference number: 5 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTVMLRG*DCYCID
Trigger: ATCTATGCAGTAACAGTCCAAACCCCTCAACATAAC...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTGCTTGGCCCGTGGTaGAGGAATTCGTTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILLLGPW*RNSLAE
Trigger: CTCCGCCAACGAATTCCTCAACCACGGGCCAAGCAA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS-3UTR CAA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCGTGACTAGTCATCAGTaGGTCCAAAGCATACTATTA +
Preference number: 5 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTVTSHQ*VQSILL
Trigger: TAATAGTATGCTTTGGACCAACTGATGACTAGTCAC...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACAGGGTTTCAGCATCTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAQGFSI*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGATGCTGAAACCCTG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TTGTTTCACCTAACCGACTCCCAGGCACTACTGCTAGCTCAGCGTCAAACAACCTTCATGAAGGATTTCTaGGTTGCAAAGCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LFHLTDSQALLLAQRQTTFMKDF*VAKQSS
Trigger: AGAAGACTGCTTTGCAACCAAGAAATCCTTCATGAA...GGTTGTTTGACGCTGAGCTAGCAGTAGTGCCTGGGAGTCGGTTAGGTGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAAAAACTAGGGCGTCGTaGCCCTCCAGCACGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAKTRAS*PSSTSK
Trigger: TTTGGACGTGCTGGAGGGCAACGACGCCCTAGTTTT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAGTGGAAGGCATTCATTaGCACAACGCTGTGCGCATG +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAVEGIH*HNAVRM
Trigger: CATGCGCACAGCGTTGTGCAAATGAATGCCTTCCAC...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000431332.7
CDS-3UTR CAA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAAAGCCACTTGAAGATTaGGGGCCATACTTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRKPLED*GPYLQV
Trigger: CACCTGCAAGTATGGCCCCAAATCTTCAAGTGGCTT...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCCACGTCACCTTTCTTaGGGCGCAAAGGGTATGGAT +
Preference number: 5 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCPRHLS*GAKGMD
Trigger: ATCCATACCCTTTGCGCCCAAAGAAAGGTGACGTGG...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS CCA 90 bp CATTCCAAATTTTGCTGGTATATGCGTGAACATAGAATATGCGCATaGAATGGGGTAAAGAGAACCATGCCTGGATACAACCTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: HSKFCWYMREHRICA*NGVKRTMPGYNLPR
Trigger: CCGAGGAAGGTTGTATCCAGGCATGGTTCTCTTTACCCCATTCCATGCGCATATTCTATGTTCACGCATATACCAGCAAAATTTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTCACCCTGCACTACTCTaGCTCCATAGGTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCHPALL*LHRFQV
Trigger: GACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGTG...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCACCCTGCACTACTCTaGCTCCATAGGTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILHPALL*LHRFQV
Trigger: GACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGTG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGCACCCTGCACTACTCTaGCTCCATAGGTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWHPALL*LHRFQV
Trigger: GACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGTG...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS GCA 90 bp CTGCCTCATTCCAAATTTTGCTGGTATATGCGTGAACATAGAATATaGGCATGGAATGGGGTAAAGAGAACCATGCCTGGATACAACCTT +
Preference number: 5 (lower is better)
Translates to: LPHSKFCWYMREHRI*AWNGVKRTMPGYNL
Trigger: AAGGTTGTATCCAGGCATGGTTCTCTTTACCCCATTCCATGCGCATATTCTATGTTCACGCATATACCAGCAAAATTTGGAATGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTGTGGAAGGCATTCATTaGCACAACGCTGTGCGCATG +
Preference number: 5 (lower is better)
Translates to: QPTLKLHKINSINTISHSVEGIH*HNAVRM
Trigger: CATGCGCACAGCGTTGTGCAAATGAATGCCTTCCAC...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGAGCTCTCTCACGCACTTaGAATTCAGGCATCAATGAA +
Preference number: 5 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRALSRT*NSGINE
Trigger: TTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAGC...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGATACAGGAGAATCACTaGAACCCAAGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMIQENH*NPRGRG
Trigger: ACCTCTGCCTCTTGGGTTCAAGTGATTCTCCTGTAT...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCAAGGATTCTGCCTATaGAGAATTCAGGAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILQGFCL*RIQEVV
Trigger: GACTACCTCCTGAATTCTCAATAGGCAGAATCCTTG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGCTAGCCCTCTGGTTTTaGTCAAGGATTCTGCCTATT +
Preference number: 5 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWLALWF*SRILPI
Trigger: AATAGGCAGAATCCTTGACAAAAACCAGAGGGCTAG...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCTAGCCCTCTGGTTTTaGTCAAGGATTCTGCCTATT +
Preference number: 5 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSLALWF*SRILPI
Trigger: AATAGGCAGAATCCTTGACAAAAACCAGAGGGCTAG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCTAGCCCTCTGGTTTTaGTCAAGGATTCTGCCTATT +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILLALWF*SRILPI
Trigger: AATAGGCAGAATCCTTGACAAAAACCAGAGGGCTAG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTGCTCTCTCACGCACTTaGAATTCAGGCATCAATGAA +
Preference number: 5 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSALSRT*NSGINE
Trigger: TTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAGC...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAGCTCTCTCACGCACTTaGAATTCAGGCATCAATGAA +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAALSRT*NSGINE
Trigger: TTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAGC...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTAATGGGCACAATGTTTaGTTCCTCCAGCAACAGAAA +
Preference number: 5 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPNGHNV*FLQQQK
Trigger: TTTCTGTTGCTGGAGGAACAAAACATTGTGCCCATT...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTGTCTGCATATTCCACTaGCAAGTGGCATTTCAAATC +
Preference number: 5 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPVCIFH*QVAFQI
Trigger: GATTTGAAATGCCACTTGCAAGTGGAATATGCAGAC...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS GCA 90 bp CTCCATAGGTTTCAAGTCTGTAAGATACTGCCTCATTCCAAATTTTaGTGGTATATGCGTGAACATAGAATATGCGCATGGAATGGGGTA +
Preference number: 5 (lower is better)
Translates to: LHRFQVCKILPHSKF*WYMREHRICAWNGV
Trigger: TACCCCATTCCATGCGCATATTCTATGTTCACGCATATACCAGCAAAATTTGGAATGAGGCAGTATCTTACAGACTTGAAACCTATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS GCA 90 bp ATCAATGTCTTCATCCAAACAGACCAAATCACCCTGCACTACTCTTaGTCCATAGGTTTCAAGTCTGTAAGATACTGCCTCATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: INVFIQTDQITLHYS*SIGFKSVRYCLIPN
Trigger: ATTTGGAATGAGGCAGTATCTTACAGACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGTGATTTGGTCTGTTTGGATGAAGACATTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAACCAGACTGATGATTTaGGTCACCATCAGTGTACTT +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMATRLMI*VTISVL
Trigger: AAGTACACTGATGGTGACCAAAATCATCAGTCTGGT...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCAAGGATTCTGCCTATaGAGAATTCAGGAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIQGFCL*RIQEVV
Trigger: GACTACCTCCTGAATTCTCAATAGGCAGAATCCTTG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp TGGGAGGTTGAGGTGTATAACATGGGAACATTTGCTATTAGGCTGAGCATCTCTAGGTTTCCAAACTTTTaGTTGACAAAATGGTGGACA +
Preference number: 5 (lower is better)
Translates to: WEVEVYNMGTFAIRLSISRFPNF*LTKWWT
Trigger: TGTCCACCATTTTGTCAACAAAAAGTTTGGAAACCT...AGAGATGCTCAGCCTAATAGCAAATGTTCCCATGTTATACACCTCAACCTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCACACCCTGCACTACTCTaGCTCCATAGGTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: ISSSNLFSYPYINVKDFAHPALL*LHRFQV
Trigger: GACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGTG...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TGTATGCAGAACTCCCACAAAATGCAATTTACCCATGTAACAAACCTGCACATGCTTTCTCTCCAACATTaGCTTCACTGCGACCTAATT +
Preference number: 5 (lower is better)
Translates to: CMQNSHKMQFTHVTNLHMLSLQH*LHCDLI
Trigger: AATTAGGTCGCAGTGAAGCAAATGTTGGAGAGAAAG...CATGTGCAGGTTTGTTACATGGGTAAATTGCATTTTGTGGGAGTTCTGCATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCTTTCTCTCCAACATTaGCTTCACTGCGACCTAATT +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILLSLQH*LHCDLI
Trigger: AATTAGGTCGCAGTGAAGCAAATGTTGGAGAGAAAG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCACTTTCTCTCCAACATTaGCTTCACTGCGACCTAATT +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMALSLQH*LHCDLI
Trigger: AATTAGGTCGCAGTGAAGCAAATGTTGGAGAGAAAG...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGGTAAAAGACCTCAATTaGTTTCACCTAACCGACTCC +
Preference number: 5 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWVKDLN*FHLTDS
Trigger: GGAGTCGGTTAGGTGAAACAAATTGAGGTCTTTTAC...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCAAATAGCTCTTGTTTaGACTCCATGGCTAAACTCC +
Preference number: 5 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSQIALV*TPWLNS
Trigger: GGAGTTTAGCCATGGAGTCAAAACAAGAGCTATTTG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGAATGGGAATGGGAGGTaGAGGTGTATAACATGGGAA +
Preference number: 5 (lower is better)
Translates to: VQYNVSHEMVENYTKGYENGNGR*RCITWE
Trigger: TTCCCATGTTATACACCTCAACCTCCCATTCCCATT...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS TCA 90 bp TCCAAGTACTGGAAGAACCACCTGATGTATTGCATACATATTAGCTaGTCCCTCCTCTTCAGTTACCAGGTGAATTTTACTATTTGGGAA +
Preference number: 5 (lower is better)
Translates to: SKYWKNHLMYCIHIS*SLLFSYQVNFTIWE
Trigger: TTCCCAAATAGTAAAATTCACCTGGTAACTGAAGAGGAGGGATCAGCTAATATGTATGCAATACATCAGGTGGTTCTTCCAGTACTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CCA 90 bp CATAGGTTTCAAGTCTGTAAGATACTGCCTCATTCCAAATTTTGCTaGTATATGCGTGAACATAGAATATGCGCATGGAATGGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: HRFQVCKILPHSKFC*YMREHRICAWNGVK
Trigger: CTTTACCCCATTCCATGCGCATATTCTATGTTCACGCATATACCAGCAAAATTTGGAATGAGGCAGTATCTTACAGACTTGAAACCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTACCAGACTGATGATTTaGGTCACCATCAGTGTACTT +
Preference number: 5 (lower is better)
Translates to: NYSGVSITNRGMAFPLYITRLMI*VTISVL
Trigger: AAGTACACTGATGGTGACCAAAATCATCAGTCTGGT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATCTAACAACCATTGCTaGATAGGTGATGGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMASNNHC*IGDGFL
Trigger: AAGAAAGCCATCACCTATCAAGCAATGGTTGTTAGA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGTCTAACAACCATTGCTaGATAGGTGATGGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWSNNHC*IGDGFL
Trigger: AAGAAAGCCATCACCTATCAAGCAATGGTTGTTAGA...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTCTTTCTCTCCAACATTaGCTTCACTGCGACCTAATT +
Preference number: 5 (lower is better)
Translates to: NYSGVSITNRGMAFPLYILSLQH*LHCDLI
Trigger: AATTAGGTCGCAGTGAAGCAAATGTTGGAGAGAAAG...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp GAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTGGTATGGCATTTCCCTaGTATATTGTTCTGATCAAT +
Preference number: 5 (lower is better)
Translates to: EVITTLGYLSQTEVWHFPGMAFP*YIVLIN
Trigger: ATTGATCAGAACAATATACAAGGGAAATGCCATACC...AGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAATGGGCACAATGTTTaGTTCCTCCAGCAACAGAAA +
Preference number: 5 (lower is better)
Translates to: NYSGVSITNRGMAFPLYINGHNV*FLQQQK
Trigger: TTTCTGTTGCTGGAGGAACAAAACATTGTGCCCATT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCAAACTGGGTTAGTTaGTCTCCAATATCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCSNWVS*SPISVL
Trigger: AAGCACAGATATTGGAGACAAACTAACCCAGTTTGA...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
CDS-3UTR CAA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTTCAAACTGGGTTAGTTaGTCTCCAATATCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSSNWVS*SPISVL
Trigger: AAGCACAGATATTGGAGACAAACTAACCCAGTTTGA...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344862.10
ENST00000416848.6
CDS-3UTR CAA 90 bp GTACAATACAATGTGAGCCATGAGATGGTAGAGAACTATACAAAAGGCTATGAGGCTAGGCACCAGACATaGTTCTTAGTGTTTCATAAG +
Preference number: 5 (lower is better)
Translates to: VQYNVSHEMVENYTKGYEARHQT*FLVFHK
Trigger: CTTATGAAACACTAAGAACAATGTCTGGTGCCTAGC...CTCATAGCCTTTTGTATAGTTCTCTACCATCTCATGGCTCACATTGTATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp CATAGTAAACAAGATGGACTGACTAGAGTGAAAAACGAAGGCCACCCAGTTAGATACTTAGAGGTATTCTaGACAACCCACACTGAAATT +
Preference number: 5 (lower is better)
Translates to: HSKQDGLTRVKNEGHPVRYLEVF*TTHTEI
Trigger: AATTTCAGTGTGGGTTGTCAAGAATACCTCTAAGTA...TCTAACTGGGTGGCCTTCGTTTTTCACTCTAGTCAGTCCATCTTGTTTACTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGGAGTGACCAGCTCTTaGATCTCTTCTCTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCGVTSS*ISSLLK
Trigger: TTTTAAAAGAGAAGAGATCAAAGAGCTGGTCACTCC...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGTAAATGTGTTATGTaGAGGGGTTTGGACTGTTAC +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILCKCVM*RGLDCY
Trigger: GTAACAGTCCAAACCCCTCAACATAACACATTTACA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAGCTTTTTCTTCACATTaGGAAGTTCCATCAACGATA +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAAFSSH*EVPSTI
Trigger: TATCGTTGATGGAACTTCCAAATGTGAAGAAAAAGC...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGCTTTTTCTTCACATTaGGAAGTTCCATCAACGATA +
Preference number: 5 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCAFSSH*EVPSTI
Trigger: TATCGTTGATGGAACTTCCAAATGTGAAGAAAAAGC...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp ATAATCAAGCTCAACCACACGCTATTTTGTTTGACCTTGATTAGGTTAGTAAACCAAGGATTCTGCCTATaGAGAATTCAGGAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: IIKLNHTLFCLTLIRLVNQGFCL*RIQEVV
Trigger: GACTACCTCCTGAATTCTCAATAGGCAGAATCCTTG...GTTTACTAACCTAATCAAGGTCAAACAAAATAGCGTGTGGTTGAGCTTGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGGCTTTTCTGTGGTCTTaGTTTGTATCAGGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWAFLWS*FVSGLK
Trigger: CTTTAAACCTGATACAAACAAAGACCACAGAAAAGC...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCAGCTTTTCTGTGGTCTTaGTTTGTATCAGGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAAFLWS*FVSGLK
Trigger: CTTTAAACCTGATACAAACAAAGACCACAGAAAAGC...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGGCTTTTCTGTGGTCTTaGTTTGTATCAGGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILAFLWS*FVSGLK
Trigger: CTTTAAACCTGATACAAACAAAGACCACAGAAAAGC...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGTTTCCAAACTTTTTGTaGACAAAATGGTGGACAGCT +
Preference number: 5 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWFPNFL*TKWWTA
Trigger: AGCTGTCCACCATTTTGTCAACAAAAAGTTTGGAAA...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTTCCAAACTTTTTGTaGACAAAATGGTGGACAGCT +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILFPNFL*TKWWTA
Trigger: AGCTGTCCACCATTTTGTCAACAAAAAGTTTGGAAA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACATGCCAGTCATTCCTCCCCAACACACCCATATTTAACTGATATAAAATGGAGGTTTCCAAACTTTTaGTTGACAAAATGGTGGACA +
Preference number: 5 (lower is better)
Translates to: LHASHSSPTHPYLTDIKWRFPNF*LTKWWT
Trigger: TGTCCACCATTTTGTCAACAAAAAGTTTGGAAACCT...CCATTTTATATCAGTTAAATATGGGTGTGTTGGGGAGGAATGACTGGCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTTCTAACAACCATTGCTaGATAGGTGATGGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: NYSGVSITNRGMAFPLYISNNHC*IGDGFL
Trigger: AAGAAAGCCATCACCTATCAAGCAATGGTTGTTAGA...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp CTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTGGTATGGCATTTCCCTaGTATATTGTTCTGATCAAT +
Preference number: 5 (lower is better)
Translates to: LLWGIYHKQRYGISLVYCGMAFP*YIVLIN
Trigger: ATTGATCAGAACAATATACAAGGGAAATGCCATACC...ACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGGGTATGGCATTTCCCTaGTATATTGTTCTGATCAAT +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILGMAFP*YIVLIN
Trigger: ATTGATCAGAACAATATACAAGGGAAATGCCATACC...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp TCACAAAGAGGTAATAACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTCATTACAGCACTATaGACAATAGCAAAGACATGG +
Preference number: 5 (lower is better)
Translates to: SQRGNNYSGVSITNRGMAFITAL*TIAKTW
Trigger: CCATGTCTTTGCTATTGTCAATAGTGCTGTAATGAA...TGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTTATTACCTCTTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp CTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCTCAGCGTCAAACAACCTaGGCAATTAAAACTAATTCA +
Preference number: 5 (lower is better)
Translates to: LWGIYHKQRYGISLVYCSQRQTT*AIKTNS
Trigger: TGAATTAGTTTTAATTGCCAAGGTTGTTTGACGCTG...AGAACAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGTTCCCAGATTTGCTATaGCCTCCTAAATGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILFPDLL*PPKCEN
Trigger: ATTTTCACATTTAGGAGGCAATAGCAAATCTGGGAA...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp ACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTGCCCTGGAATCCTCATTaGTTAAATGAGACTAGTTAT +
Preference number: 5 (lower is better)
Translates to: TTLGYLSQTEVWHFPCILPWNPH*LNETSY
Trigger: ATAACTAGTCTCATTTAACAAATGAGGATTCCAGGG...CAATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTTGGCTGCTGAGTATATaGGTCATTCAGTATACTGTT +
Preference number: 5 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIWLLSI*VIQYTV
Trigger: AACAGTATACTGAATGACCAATATACTCAGCAGCCA...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS TCA 90 bp GCTGTTTCATCAATGTGGGAACCTTTCGTTTTGACATCAATGTCATaGTCTTCCATTAGTTGGTATGAGAGATTACAGGGATGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: AVSSMWEPFVLTSMS*SSISWYERLQGCFK
Trigger: TTTGAAACATCCCTGTAATCTCTCATACCAACTAATGGAAGATCATGACATTGATGTCAAAACGAAAGGTTCCCACATTGATGAAACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS TCA 90 bp AACGTCATGCTTCATTATTTCCTTCAGACAAACGGTAGCATAGCATaGAGCATCAAGATCAAAAGAGATCAAAAGAGACAAAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NVMLHYFLQTNGSIA*SIKIKRDQKRQSCF
Trigger: GAAACAGCTTTGTCTCTTTTGATCTCTTTTGATCTTGATGCTTCATGCTATGCTACCGTTTGTCTGAAGGAAATAATGAAGCATGACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS GCA 90 bp TTCAATATTTTTCAACCTCTCTGGAGTCACTTTTCTAACAACCATTaGTTGATAGGTGATGGCTTTCTTGTCTTTAAGGCCTGCATAACT +
Preference number: 5 (lower is better)
Translates to: FNIFQPLWSHFSNNH*LIGDGFLVFKACIT
Trigger: AGTTATGCAGGCCTTAAAGACAAGAAAGCCATCACCTATCAAGCAATGGTTGTTAGAAAAGTGACTCCAGAGAGGTTGAAAAATATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000547156.1
ENST00000550784.5
ENST00000551923.5
ENST00000553166.1
CDS-3UTR CAA 90 bp AACTACTCTGGGGTATCTATCACAAACAGAGGTATGGCATTTCCCTTGTATATTAGGTTTCCAAACTTTTaGTTGACAAAATGGTGGACA +
Preference number: 5 (lower is better)
Translates to: NYSGVSITNRGMAFPLYIRFPNF*LTKWWT
Trigger: TGTCCACCATTTTGTCAACAAAAAGTTTGGAAACCT...AATATACAAGGGAAATGCCATACCTCTGTTTGTGATAGATACCCCAGAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
CDS-3UTR CAA 90 bp CAACCCACACTGAAATTACACAAGATTAACTCCATTAACACCATTTCCCATTCTGAATTTTGTTTAGACTaGGGTCCCAACTCTAAGAGT +
Preference number: 5 (lower is better)
Translates to: QPTLKLHKINSINTISHSEFCLD*GPNSKS
Trigger: ACTCTTAGAGTTGGGACCCAAGTCTAAACAAAATTC...AGAATGGGAAATGGTGTTAATGGAGTTAATCTTGTGTAATTTCAGTGTGGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS TCA 90 bp TTCTTCACATTTGGAAGTTCCATCAACGATAGTATCTTCCTTTTCTaGACCAGACTGATGATTTTGGTCACCATCAGTGTACTTAATCAA +
Preference number: 5 (lower is better)
Translates to: FFTFGSSINDSIFLF*TRLMILVTISVLNQ
Trigger: TTGATTAAGTACACTGATGGTGACCAAAATCATCAGTCTGGTTCAGAAAAGGAAGATACTATCGTTGATGGAACTTCCAAATGTGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000549868.1
ENST00000551923.5
ENST00000553166.1
CDS TCA 90 bp TCAAAAGAGACAAAGCTGTTTCATCAATGTGGGAACCTTTCGTTTTaGCATCAATGTCATGATCTTCCATTAGTTGGTATGAGAGATTAC +
Preference number: 5 (lower is better)
Translates to: SKETKLFHQCGNLSF*HQCHDLPLVGMRDY
Trigger: GTAATCTCTCATACCAACTAATGGAAGATCATGACATTGATGTCAAAACGAAAGGTTCCCACATTGATGAAACAGCTTTGTCTCTTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS-3UTR CAA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAGCTTTTTCTTCACATTaGGAAGTTCCATCAACGATA +
Preference number: 5 (lower is better)
Translates to: ISSSNLFSYPYINVKDFAAFSSH*EVPSTI
Trigger: TATCGTTGATGGAACTTCCAAATGTGAAGAAAAAGC...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS-3UTR CAA 90 bp ATATCTTCCTCCAACCTCTTTTCCTACCCTTACATTAATGTAAAAGACTTTGCAGGTATGGCATTTCCCTaGTATATTGTTCTGATCAAT +
Preference number: 5 (lower is better)
Translates to: ISSSNLFSYPYINVKDFAGMAFP*YIVLIN
Trigger: ATTGATCAGAACAATATACAAGGGAAATGCCATACC...TGCAAAGTCTTTTACATTAATGTAAGGGTAGGAAAAGAGGTTGGAGGAAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344862.10
CDS TCA 72 bp ACAGTGGGCGGGGGAGTAGTTTGCTTGGCCCGTGGTTaGGGAATTCGTTGGCGGAGGAGGGATCCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: TVGGGVVCLARG*GIRWRRRDPEK
Trigger: CTTCTCAGGATCCCTCCTCCGCCAACGAATTCCTCAACCACGGGCCAAGCAAACTACTCCCCCGCCCACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416848.6
ENST00000549868.1
CDS CAA 72 bp ACAGAGACTGCTGCTGACAGTGGGCGGGGGAGTAGTTaGCTTGGCCCGTGGTTGAGGAATTCGTTGGCGGAG +
Preference number: 6 (lower is better)
Translates to: TETAADSGRGSS*LGPWLRNSLAE
Trigger: CTCCGCCAACGAATTCCTCAACCACGGGCCAAGCAAACTACTCCCCCGCCCACTGTCAGCAGCAGTCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416848.6
ENST00000549868.1
CDS CAA 90 bp CAGTCCTGCAGAAGCTACTTAACTTCACAGAAAACTAGGGCGTCGTaGCCCTCCAGCACGTCCAAAGGTGTCCCCGACAAGGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: QSCRSYLTSQKTRAS*PSSTSKGVPDKASS
Trigger: GCTGCTGGCCTTGTCGGGGACACCTTTGGACGTGCTGGAGGGCAACGACGCCCTAGTTTTCTGTGAAGTTAAGTAGCTTCTGCAGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416848.6
ENST00000549868.1
CDS CAA 90 bp ACTCTGCCTGTCCAAAGGCACGACACTAGTCCACGTCACCTTTCTTaGGGCGCAAAGGGTATGGATCCTCAATGCCAACCTCGTCACCCC +
Preference number: 6 (lower is better)
Translates to: TLPVQRHDTSPRHLS*GAKGMDPQCQPRHP
Trigger: GGGGTGACGAGGTTGGCATTGAGGATCCATACCCTTTGCGCCCAAAGAAAGGTGACGTGGACTAGTGTCGTGCCTTTGGACAGGCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS GCA 72 bp GCCTGGATACAACCTTCCTCGGTCATGCCAAAGCGGTaGAATGCCTCCAACAATGCTCTCTCACGCACTTTG +
Preference number: 6 (lower is better)
Translates to: AWIQPSSVMPKR*NASNNALSRTL
Trigger: CAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTTGTATCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CAA 72 bp GTCCAAAGGCACGACACTAGTCCACGTCACCTTTCTTaGGGCGCAAAGGGTATGGATCCTCAATGCCAACCT +
Preference number: 6 (lower is better)
Translates to: VQRHDTSPRHLS*GAKGMDPQCQP
Trigger: AGGTTGGCATTGAGGATCCATACCCTTTGCGCCCAAAGAAAGGTGACGTGGACTAGTGTCGTGCCTTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416848.6
CDS CAA 72 bp AGAAGCTACTTAACTTCACAGAAAACTAGGGCGTCGTaGCCCTCCAGCACGTCCAAAGGTGTCCCCGACAAG +
Preference number: 6 (lower is better)
Translates to: RSYLTSQKTRAS*PSSTSKGVPDK
Trigger: CTTGTCGGGGACACCTTTGGACGTGCTGGAGGGCAACGACGCCCTAGTTTTCTGTGAAGTTAAGTAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416848.6
ENST00000549868.1
CDS GCA 72 bp AAGAGAACCATGCCTGGATACAACCTTCCTCGGTCATaGCAAAGCGGTGCAATGCCTCCAACAATGCTCTCT +
Preference number: 6 (lower is better)
Translates to: KRTMPGYNLPRS*QSGAMPPTMLS
Trigger: AGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTTGTATCCAGGCATGGTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CCA 72 bp AATATGCGCATGGAATGGGGTAAAGAGAACCATGCCTaGATACAACCTTCCTCGGTCATGCCAAAGCGGTGC +
Preference number: 6 (lower is better)
Translates to: NMRMEWGKENHA*IQPSSVMPKRC
Trigger: GCACCGCTTTGGCATGACCGAGGAAGGTTGTATCCAGGCATGGTTCTCTTTACCCCATTCCATGCGCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS GCA 72 bp GATACAACCTTCCTCGGTCATGCCAAAGCGGTGCAATaGCTCCAACAATGCTCTCTCACGCACTTTGAATTC +
Preference number: 6 (lower is better)
Translates to: DTTFLGHAKAVQ*LQQCSLTHFEF
Trigger: GAATTCAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CAA 90 bp ATGCCAAAGCGGTGCAATGCCTCCAACAATGCTCTCTCACGCACTTaGAATTCAGGCATCAATGAAAGTGTGCCTTTAGCATCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: MPKRCNASNNALSRT*NSGINESVPLASSV
Trigger: AACTGAGGATGCTAAAGGCACACTTTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTGCACCGCTTTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CAA 72 bp CGGTGCAATGCCTCCAACAATGCTCTCTCACGCACTTaGAATTCAGGCATCAATGAAAGTGTGCCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: RCNASNNALSRT*NSGINESVPLA
Trigger: TGCTAAAGGCACACTTTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAGCATTGTTGGAGGCATTGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS GCA 72 bp TTCATCCAAACAGACCAAATCACCCTGCACTACTCTTaGTCCATAGGTTTCAAGTCTGTAAGATACTGCCTC +
Preference number: 6 (lower is better)
Translates to: FIQTDQITLHYS*SIGFKSVRYCL
Trigger: GAGGCAGTATCTTACAGACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGTGATTTGGTCTGTTTGGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CAA 72 bp TGCCTAATGGCACTGTGTAAACTAGCCCTCTGGTTTTaGTCAAGGATTCTGCCTATTGAGAATTCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: CLMALCKLALWF*SRILPIENSGG
Trigger: ACCTCCTGAATTCTCAATAGGCAGAATCCTTGACAAAAACCAGAGGGCTAGTTTACACAGTGCCATTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
ENST00000553166.1
CDS CAA 72 bp CAACCTCTCTGGAGTCACTTTTCTAACAACCATTGCTaGATAGGTGATGGCTTTCTTGTCTTTAAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: QPLWSHFSNNHC*IGDGFLVFKAC
Trigger: GCAGGCCTTAAAGACAAGAAAGCCATCACCTATCAAGCAATGGTTGTTAGAAAAGTGACTCCAGAGAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000547156.1
ENST00000550784.5
ENST00000551923.5
ENST00000553166.1
CDS CAA 72 bp CTTCATCCAAACAGACCAAATCACCCTGCACTACTCTaGCTCCATAGGTTTCAAGTCTGTAAGATACTGCCT +
Preference number: 6 (lower is better)
Translates to: LHPNRPNHPALL*LHRFQVCKILP
Trigger: AGGCAGTATCTTACAGACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGTGATTTGGTCTGTTTGGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CCA 72 bp TTTTGCTGGTATATGCGTGAACATAGAATATGCGCATaGAATGGGGTAAAGAGAACCATGCCTGGATACAAC +
Preference number: 6 (lower is better)
Translates to: FCWYMREHRICA*NGVKRTMPGYN
Trigger: GTTGTATCCAGGCATGGTTCTCTTTACCCCATTCCATGCGCATATTCTATGTTCACGCATATACCAGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CAA 90 bp GGAAATTTCTGCCTAATGGCACTGTGTAAACTAGCCCTCTGGTTTTaGTCAAGGATTCTGCCTATTGAGAATTCAGGAGGTAGTCCAATT +
Preference number: 6 (lower is better)
Translates to: GNFCLMALCKLALWF*SRILPIENSGGSPI
Trigger: AATTGGACTACCTCCTGAATTCTCAATAGGCAGAATCCTTGACAAAAACCAGAGGGCTAGTTTACACAGTGCCATTAGGCAGAAATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000551923.5
ENST00000553166.1
CDS CAA 90 bp CATCAATGTCTTCATCCAAACAGACCAAATCACCCTGCACTACTCTaGCTCCATAGGTTTCAAGTCTGTAAGATACTGCCTCATTCCAAA +
Preference number: 6 (lower is better)
Translates to: HQCLHPNRPNHPALL*LHRFQVCKILPHSK
Trigger: TTTGGAATGAGGCAGTATCTTACAGACTTGAAACCTATGGAGCAAGAGTAGTGCAGGGTGATTTGGTCTGTTTGGATGAAGACATTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS TCA 72 bp CAATGCTCTCTCACGCACTTTGAATTCAGGCATCAATaGAAGTGTGCCTTTAGCATCCTCAGTTTGAAGAAA +
Preference number: 6 (lower is better)
Translates to: QCSLTHFEFRHQ*KCAFSILSLKK
Trigger: TTTCTTCAAACTGAGGATGCTAAAGGCACACTTTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS GCA 72 bp TTTCAACCTCTCTGGAGTCACTTTTCTAACAACCATTaGTTGATAGGTGATGGCTTTCTTGTCTTTAAGGCC +
Preference number: 6 (lower is better)
Translates to: FQPLWSHFSNNH*LIGDGFLVFKA
Trigger: GGCCTTAAAGACAAGAAAGCCATCACCTATCAAGCAATGGTTGTTAGAAAAGTGACTCCAGAGAGGTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000547156.1
ENST00000550784.5
ENST00000551923.5
ENST00000553166.1
CDS TCA 72 bp TGGAAGAACCACCTGATGTATTGCATACATATTAGCTaGTCCCTCCTCTTCAGTTACCAGGTGAATTTTACT +
Preference number: 6 (lower is better)
Translates to: WKNHLMYCIHIS*SLLFSYQVNFT
Trigger: AGTAAAATTCACCTGGTAACTGAAGAGGAGGGATCAGCTAATATGTATGCAATACATCAGGTGGTTCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS TCA 72 bp TTTGGAAGTTCCATCAACGATAGTATCTTCCTTTTCTaGACCAGACTGATGATTTTGGTCACCATCAGTGTA +
Preference number: 6 (lower is better)
Translates to: FGSSINDSIFLF*TRLMILVTISV
Trigger: TACACTGATGGTGACCAAAATCATCAGTCTGGTTCAGAAAAGGAAGATACTATCGTTGATGGAACTTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000549868.1
ENST00000551923.5
ENST00000553166.1
CDS TCA 72 bp TCAATGTGGGAACCTTTCGTTTTGACATCAATGTCATaGTCTTCCATTAGTTGGTATGAGAGATTACAGGGA +
Preference number: 6 (lower is better)
Translates to: SMWEPFVLTSMS*SSISWYERLQG
Trigger: TCCCTGTAATCTCTCATACCAACTAATGGAAGATCATGACATTGATGTCAAAACGAAAGGTTCCCACATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS GCA 72 bp TGCTTGATAGGTGATGGCTTTCTTGTCTTTAAGGCCTaGATAACTAAAATCCGAAGGAATAACACCAAGTTT +
Preference number: 6 (lower is better)
Translates to: CLIGDGFLVFKA*ITKIRRNNTKF
Trigger: AAACTTGGTGTTATTCCTTCGGATTTTAGTTATGCAGGCCTTAAAGACAAGAAAGCCATCACCTATCAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000547156.1
ENST00000550784.5
ENST00000551923.5
ENST00000553166.1
CDS TCA 72 bp ACAAAGCTGTTTCATCAATGTGGGAACCTTTCGTTTTaGCATCAATGTCATGATCTTCCATTAGTTGGTATG +
Preference number: 6 (lower is better)
Translates to: TKLFHQCGNLSF*HQCHDLPLVGM
Trigger: CATACCAACTAATGGAAGATCATGACATTGATGTCAAAACGAAAGGTTCCCACATTGATGAAACAGCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS CAA 90 bp AATATTTTTCAACCTCTCTGGAGTCACTTTTCTAACAACCATTGCTaGATAGGTGATGGCTTTCTTGTCTTTAAGGCCTGCATAACTAAA +
Preference number: 6 (lower is better)
Translates to: NIFQPLWSHFSNNHC*IGDGFLVFKACITK
Trigger: TTTAGTTATGCAGGCCTTAAAGACAAGAAAGCCATCACCTATCAAGCAATGGTTGTTAGAAAAGTGACTCCAGAGAGGTTGAAAAATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000547156.1
ENST00000550784.5
ENST00000551923.5
ENST00000553166.1
CDS TCA 72 bp TGCTTAAGACATTTTAGCCCCCTTTCCTTCAAAGAGTaGCATATATATGGTTATACCAAGGGTATCAGTTTT +
Preference number: 6 (lower is better)
Translates to: CLRHFSPLSFKE*HIYGYTKGISF
Trigger: AAAACTGATACCCTTGGTATAACCATATATATGTCACTCTTTGAAGGAAAGGGGGCTAAAATGTCTTAAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000431332.7
ENST00000551923.5
CDS TCA 72 bp CTGTTCATCAATTTCAATAACAATAAAGTCACTTGGTaGGCTTTTTATAGTGCCATGAAATCCAACGTGATC +
Preference number: 6 (lower is better)
Translates to: LFINFNNNKVTW*AFYSAMKSNVI
Trigger: GATCACGTTGGATTTCATGGCACTATAAAAAGCTCACCAAGTGACTTTATTGTTATTGAAATTGATGAACAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344862.10
ENST00000416848.6
ENST00000549868.1
ENST00000551923.5
ENST00000553166.1