RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PUS7 (Homo sapiens)

Ensembl gene IDs: ENSG00000091127

Ensembl transcript IDs: ENST00000356362.6, ENST00000469408.6, ENST00000478208.1, ENST00000481939.5, ENST00000482157.1

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGAAGTTGCAGTGAGCCGAGATCATGCTATTGTGCTCCAGCCTaGGTGACTAGTGAAACTCCGTCAGCTAACATTCTGAGGACGAAT +
Preference number: 1 (lower is better)
Translates to: GRSCSEPRSCYCAPA*VTSETPSANILRTN
Trigger: ATTCGTCCTCAGAATGTTAGCTGACGGAGTTTCACTAGTCACCCAGGCTGGAGCACAATAGCATGATCTCGGCTCACTGCAACTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR GCA 90 bp TCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTaGCAGGATTTCCTTTATTACATACCATGTGTTGGGCTAAGTGCA +
Preference number: 1 (lower is better)
Translates to: SWHSPALFVDRGFAS*QDFLYYIPCVGLSA
Trigger: TGCACTTAGCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR GCA 90 bp CAGTTGCCAGGATTTCCTTTATTACATACCATGTGTTGGGCTAAGTaGAACTTCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCT +
Preference number: 1 (lower is better)
Translates to: QLPGFPLLHTMCWAK*NFLFFFSMDRIPPA
Trigger: AGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR TCA 90 bp GAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTaGCAAAGGGTAAACGCTACTGATAGAAGAAAGCCTTGTCCATTT +
Preference number: 1 (lower is better)
Translates to: EKFMQCQTWKYQSHW*QRVNATDRRKPCPF
Trigger: AAATGGACAAGGCTTTCTTCTATCAGTAGCGTTTACCCTTTGTCACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR TCA 90 bp ATAGGATTCCACCTGCTGGCTCTTTCCTATAATTCCATAATTCATTaGGACCAGAAGCAAAAACTGGTGGTGTCTTCCCTTCTAGGTTGT +
Preference number: 1 (lower is better)
Translates to: IGFHLLALSYNSIIH*DQKQKLVVSSLLGC
Trigger: ACAACCTAGAAGGGAAGACACCACCAGTTTTTGCTTCTGGTCTCAATGAATTATGGAATTATAGGAAAGAGCCAGCAGGTGGAATCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR GCA 90 bp CGAGGTCCCCTGGAACAGGTTTTAGTCCATAGTCTTCTATCCTCTTaGTTACCATGTTATTCCACACATAGCTTTGGTAGCTATGAATAT +
Preference number: 1 (lower is better)
Translates to: RGPLEQVLVHSLLSS*LPCYSTHSFGSYEY
Trigger: ATATTCATAGCTACCAAAGCTATGTGTGGAATAACATGGTAAGCAAGAGGATAGAAGACTATGGACTAAAACCTGTTCCAGGGGACCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR CCA 90 bp ATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTCCATaGATAGGATTCCACCTGCTGGCTCTTTCCTATAATTCCATAATT +
Preference number: 1 (lower is better)
Translates to: IPCVGLSATSSSFSP*IGFHLLALSYNSII
Trigger: AATTATGGAATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR TCA 90 bp TCAGCTAACATTCTGAGGACGAATAATGATCTTTCGGTAGGCCCCTaGCAAGGAATAATCTCGAATTTTGTGTCTCATGTTGTCAATATC +
Preference number: 1 (lower is better)
Translates to: SANILRTNNDLSVGP*QGIISNFVSHVVNI
Trigger: GATATTGACAACATGAGACACAAAATTCGAGATTATTCCTTGTCAGGGGCCTACCGAAAGATCATTATTCGTCCTCAGAATGTTAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR TCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTTGGCTGTGGCTCCTTTaGGAACGAGGTCCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TLKMASWHSPALFVDRGFWLWLL*ERGPLE
Trigger: TTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCA...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR CAA 90 bp AGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTaGCCAGTTGCCAGGATTTCCTTTATTACATACCATGTGTTGGGC +
Preference number: 2 (lower is better)
Translates to: RWLPGTALLFLLTVG*PVARISFITYHVLG
Trigger: GCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR TCA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTCTGAAGTCAGGAGTTTaGCACCAGCCTGGCCAATAT +
Preference number: 2 (lower is better)
Translates to: TALLFLLTVGLPVARISFLKSGV*HQPGQY
Trigger: ATATTGGCCAGGCTGGTGTCAAACTCCTGACTTCAG...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR CCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTCTTAGGAGGCTGAGGTaGGAGAGTCACTGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: SHQRSLCNARHGNTKATGLRRLR*ESHWSL
Trigger: CAGGCTCCAGTGACTCTCCCACCTCAGCCTCCTAAG...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR-3UTR GCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTTTTGGGATCATCATATaGAACGACTTCCCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: TLKMASWHSPALFVDRGFFGIII*NDFPEV
Trigger: GACTTCAGGGAAGTCGTTGCATATGATGATCCCAAA...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR TCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTCGTCAGCTAACATTCTaGGGACGAATAATGATCTTT +
Preference number: 2 (lower is better)
Translates to: TLKMASWHSPALFVDRGFRQLTF*GRIMIF
Trigger: AAAGATCATTATTCGTCCTCAGAATGTTAGCTGACG...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR GCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACCTGGGAGGTCGAGGCTaGAGTGCAAGATTGAGAATT +
Preference number: 2 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHLGGRG*SARLRI
Trigger: AATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAG...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR-3UTR CCA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTTCTTCTTTTTCTCCATaGATAGGATTCCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: TALLFLLTVGLPVARISFSSFSP*IGFHLL
Trigger: CAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGA...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR CCA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTTTACATACCATGTGTTaGGCTAAGTGCAACTTCCTC +
Preference number: 2 (lower is better)
Translates to: TALLFLLTVGLPVARISFLHTMC*AKCNFL
Trigger: GAGGAAGTTGCACTTAGCCCAACACATGGTATGTAA...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR TCA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATATGCAACGACTTCCCTaGAGTCAGGAGTTTGACACC +
Preference number: 2 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNMQRLP*SQEFDT
Trigger: GGTGTCAAACTCCTGACTTCAGGGAAGTCGTTGCAT...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR TCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGCTGACATTTTACTCTaGTTTAAGCACCTGAAGTGT +
Preference number: 2 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHADILL*FKHLKC
Trigger: ACACTTCAGGTGCTTAAATCAGAGTAAAATGTCAGC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR-3UTR GCA 90 bp CGTGGGTTTGCCAGTTGCCAGGATTTCCTTTATTACATACCATGTGTTGGGCTAAGTCTTCTATCCTCTTaGTTACCATGTTATTCCACA +
Preference number: 2 (lower is better)
Translates to: RGFASCQDFLYYIPCVGLSLLSS*LPCYST
Trigger: TGTGGAATAACATGGTAAGCAAGAGGATAGAAGACT...TAGCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR GCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAGAACTAAGACAAAAATaGACAGGGAGCCAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LYTPSQMCQILLLSFENVELRQK*TGSQEA
Trigger: TGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGTTC...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR-3UTR CAA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTAGACAGGAGAATCGCTaGAACCTGGGAGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: TLKMASWHSPALFVDRGFRQENR*NLGGRS
Trigger: ACTTCTGCCTCCCAGGTTCAAGCGATTCTCCTGTCT...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR CCA 72 bp TGCAGTGAGCCGAGATCATGCTATTGTGCTCCAGCCTaGGTGACTAGTGAAACTCCGTCAGCTAACATTCTG +
Preference number: 3 (lower is better)
Translates to: CSEPRSCYCAPA*VTSETPSANIL
Trigger: CAGAATGTTAGCTGACGGAGTTTCACTAGTCACCCAGGCTGGAGCACAATAGCATGATCTCGGCTCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR CAA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATGTGGCTGTGGCTCCTTaGAGAACGAGGTCCCCTGGA +
Preference number: 3 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNVAVAP*RTRSPG
Trigger: TCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCAC...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR GCA 72 bp AGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTaGCAGGATTTCCTTTATTACATACCATGTGTTGGG +
Preference number: 3 (lower is better)
Translates to: SPALFVDRGFAS*QDFLYYIPCVG
Trigger: CCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR TCA 72 bp ATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTaGCAAAGGGTAAACGCTACTGATAGAAGAAAGCCT +
Preference number: 3 (lower is better)
Translates to: MQCQTWKYQSHW*QRVNATDRRKP
Trigger: AGGCTTTCTTCTATCAGTAGCGTTTACCCTTTGTCACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR-3UTR CAA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACCCAGGAAGCAAACACTaGTGTACGTTTTCTAATCTG +
Preference number: 3 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHPGSKH*CTFSNL
Trigger: CAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGG...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR-3UTR CAA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTGTACTGTATTTATATTaGTGGGTGGCAGCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: SHQRSLCNARHGNTKATGVLYLY*WVAALK
Trigger: TTTGAGAGCTGCCACCCACAAATATAAATACAGTAC...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR GCA 72 bp CTGGAACAGGTTTTAGTCCATAGTCTTCTATCCTCTTaGTTACCATGTTATTCCACACATAGCTTTGGTAGC +
Preference number: 3 (lower is better)
Translates to: LEQVLVHSLLSS*LPCYSTHSFGS
Trigger: GCTACCAAAGCTATGTGTGGAATAACATGGTAAGCAAGAGGATAGAAGACTATGGACTAAAACCTGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR CAA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATTTCCCTGTAGGCTTCTaGAATTTTATGCTTTGGGTA +
Preference number: 3 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNFPVGF*NFMLWV
Trigger: TACCCAAAGCATAAAATTCAAGAAGCCTACAGGGAA...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR CAA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATTTGAAAAGTGGAATTTaGGGATCATCATATGCAACG +
Preference number: 3 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNLKSGI*GSSYAT
Trigger: CGTTGCATATGATGATCCCAAAATTCCACTTTTCAA...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR-3UTR CAA 90 bp TTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTGTCTTCCCTTCTAGGTaGTCCACATCTGTGTTGAAA +
Preference number: 3 (lower is better)
Translates to: FLYYIPCVGLSATSSSFSVFPSR*STSVLK
Trigger: TTTCAACACAGATGTGGACAACCTAGAAGGGAAGAC...AGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR TCA 72 bp ATTCTGAGGACGAATAATGATCTTTCGGTAGGCCCCTaGCAAGGAATAATCTCGAATTTTGTGTCTCATGTT +
Preference number: 3 (lower is better)
Translates to: ILRTNNDLSVGP*QGIISNFVSHV
Trigger: AACATGAGACACAAAATTCGAGATTATTCCTTGTCAGGGGCCTACCGAAAGATCATTATTCGTCCTCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR GCA 72 bp TGCAAAAGCCACCGCAACCAAAAAGTCTATAATGCTTaGCTGAATCTAGTACATAAGCAGGATAATGACAAT +
Preference number: 3 (lower is better)
Translates to: CKSHRNQKVYNA*LNLVHKQDNDN
Trigger: ATTGTCATTATCCTGCTTATGTACTAGATTCAGGCAAGCATTATAGACTTTTTGGTTGCGGTGGCTTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR-3UTR CAA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCCCAGGAAGCAAACACTaGTGTACGTTTTCTAATCTG +
Preference number: 3 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFPGSKH*CTFSNL
Trigger: CAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGG...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR-3UTR CAA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCATCCATAGTCCAGATTaGTTTTGTTGCATTTGCTCT +
Preference number: 3 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFIHSPD*FCCICS
Trigger: AGAGCAAATGCAACAAAACAAATCTGGACTATGGAT...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGGCGGCGAAGGCCACTTaGATGAGCCAGCGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALAAKAT*MSQRLG
Trigger: CCCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGC...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGAGGTGGCCAGCGCTCTaGTTGGGACGCAAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALRWPAL*LGRKRA
Trigger: CGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCT...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTAGCTGGGCGGCGAGGTaGCCAGCGCTCTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TLKMASWHSPALFVDRGFSWAAR*PALWLG
Trigger: TCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCT...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp CTCAATATAGGTGGCTGTGGCTCCTTTGAGAACGAGGTCCCCTGGAACAGGTTTAGGTGGCCAGCGCTCTaGTTGGGACGCAAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LNIGGCGSFENEVPWNRFRWPAL*LGRKRA
Trigger: CGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCT...AAACCTGTTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCACCTATATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGCTTAGGAGGCTGAGGTaGGAGAGTCACTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALLRRLR*ESHWSL
Trigger: CAGGCTCCAGTGACTCTCCCACCTCAGCCTCCTAAG...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CGTGGGTTTGCCAGTTGCCAGGATTTCCTTTATTACATACCATGTGTTGGGCTAGCGCGGAGGACCAGATaGGCTCCAGCCGACTCACCG +
Preference number: 4 (lower is better)
Translates to: RGFASCQDFLYYIPCVGLARRTR*APADSP
Trigger: CGGTGAGTCGGCTGGAGCGCATCTGGTCCTCCGCGC...TAGCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGCGCGGAGGACCAGATaGGCTCCAGCCGACTCACCG +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHARRTR*APADSP
Trigger: CGGTGAGTCGGCTGGAGCGCATCTGGTCCTCCGCGC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTGCGCGGAGGACCAGATaGGCTCCAGCCGACTCACCG +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGARRTR*APADSP
Trigger: CGGTGAGTCGGCTGGAGCGCATCTGGTCCTCCGCGC...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTTTTAAGGCCGGAGCCTaGGAGCGCGGGCGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICFKAGA*ERGRGV
Trigger: CACGCCGCGCCCGCGCTCCCAGGCTCCGGCCTTAAA...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356362.6
CDS-3UTR TCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTCTCCTCGCACTCCTCTaGAAGTCCATCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TLKMASWHSPALFVDRGFLLALL*KSIFLL
Trigger: GAGGAGGAAGATGGACTTTCAGAGGAGTGCGAGGAG...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGCTACGTCAGCCTCAGTaGGTCCATGCTTCATCATGT +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALLRQPQ*VHASSC
Trigger: ACATGATGAAGCATGGACTCACTGAGGCTGACGTAG...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGAACTCACAAACTTGGTaGTGCCTACGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALNSQTW*CLRQPQ
Trigger: CTGAGGCTGACGTAGGCATCACCAAGTTTGTGAGTT...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGCTGGGCGGCGAGGTaGCCAGCGCTCTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSSWAAR*PALWLG
Trigger: TCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCT...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTGCGGCGAAGGCCACTTaGATGAGCCAGCGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSAAKAT*MSQRLG
Trigger: CCCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGC...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTGGCCAGCGCTCTGGTTaGGACGCAAGAGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSGQRSG*DARERR
Trigger: TCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCC...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGCAGCAGTTGGGTCTTTaGTCTTTGCCCATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALQQLGL*SLPILL
Trigger: GAGAAGAATGGGCAAAGACCAAAGACCCAACTGCTG...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp CTCAATATAGGTGGCTGTGGCTCCTTTGAGAACGAGGTCCCCTGGAACAGGTTTTCTGAGGGCAGCAGTTaGGTCTTTGGTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LNIGGCGSFENEVPWNRFSEGSS*VFGLCP
Trigger: TGGGCAAAGACCAAAGACCCAACTGCTGCCCTCAGA...AAACCTGTTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCACCTATATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp CGTGGGTTTGCCAGTTGCCAGGATTTCCTTTATTACATACCATGTGTTGGGCTACACCTTTCCCAGTACTaGCAGTGTCAGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RGFASCQDFLYYIPCVGLHLSQY*QCQEAE
Trigger: CTCGGCCTCCTGACACTGTCAGTACTGGGAAAGGTG...TAGCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp CTCAATATAGGTGGCTGTGGCTCCTTTGAGAACGAGGTCCCCTGGAACAGGTTTCTACGTCAGCCTCAGTaGGTCCATGCTTCATCATGT +
Preference number: 4 (lower is better)
Translates to: LNIGGCGSFENEVPWNRFLRQPQ*VHASSC
Trigger: ACATGATGAAGCATGGACTCACTGAGGCTGACGTAG...AAACCTGTTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCACCTATATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGGTGAAGTGGTTTCCTTaGAGCTCTCCCAATTTCAGT +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALVKWFP*SSPNFS
Trigger: ACTGAAATTGGGAGAGCTTCAAGGAAACCACTTCAC...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CTCAATATAGGTGGCTGTGGCTCCTTTGAGAACGAGGTCCCCTGGAACAGGTTTATAGCTCTTCCAACCTaGTACGTAGGGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LNIGGCGSFENEVPWNRFIALPT*YVGTAV
Trigger: CACAGCTGTCCCTACGTATCAGGTTGGAAGAGCTAT...AAACCTGTTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCACCTATATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTCTGAAGTCAGGAGTTTaGCACCAGCCTGGCCAATAT +
Preference number: 4 (lower is better)
Translates to: TLKMASWHSPALFVDRGFLKSGV*HQPGQY
Trigger: ATATTGGCCAGGCTGGTGTCAAACTCCTGACTTCAG...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGGTGGCCAGCGCTCTaGTTGGGACGCAAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSRWPAL*LGRKRA
Trigger: CGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCT...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTTGGCTGTGGCTCCTTTaGGAACGAGGTCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGWLWLL*ERGPLE
Trigger: TTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCA...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTCTTTCGGTAGGCCCCTaGCAAGGAATAATCTCGAAT +
Preference number: 4 (lower is better)
Translates to: TLKMASWHSPALFVDRGFLSVGP*QGIISN
Trigger: ATTCGAGATTATTCCTTGTCAGGGGCCTACCGAAAG...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTAGCCTTTTTCCCAGCTaGGTGGTAGGCTACAATGTA +
Preference number: 4 (lower is better)
Translates to: TLKMASWHSPALFVDRGFSLFPS*VVGYNV
Trigger: TACATTGTAGCCTACCACGCAGCTGGGAAAAAGGCT...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGTTTGGGATCATCATATaGAACGACTTCCCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALFGIII*NDFPAN
Trigger: GTTAGCTGGGAAGTCGTTGCATATGATGATCCCAAA...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTCTTGAATTTTATGCTTTGGGTAGATAACATCGAAACCAGGCAAGGGCATTACGCGGCGAAGGCCACTTaGATGAGCCAGCGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: FLNFMLWVDNIETRQGHYAAKAT*MSQRLG
Trigger: CCCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGC...GTAATGCCCTTGCCTGGTTTCGATGTTATCTACCCAAAGCATAAAATTCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTCTAAAGATGGCTTCCTaGCACAGCCCTGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: TLKMASWHSPALFVDRGFLKMAS*HSPALF
Trigger: AAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAG...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGAGAGATTTGATAGCCTaGTGGATGATGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALRDLIA*WMMVLF
Trigger: GAAAAGAACCATCATCCATCAGGCTATCAAATCTCT...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTTGGCTGTGGCTCCTTTaGGAACGAGGTCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSWLWLL*ERGPLE
Trigger: TTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCA...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGGCTGACATTTTACTCTaGTTTAAGCACCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALADILL*FKHLKC
Trigger: ACACTTCAGGTGCTTAAATCAGAGTAAAATGTCAGC...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTAGCTACTTAGGAGGCTaGGGTGGGAGAGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGSYLGG*GGRVTG
Trigger: TCCAGTGACTCTCCCACCTCAGCCTCCTAAGTAGCT...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAAGCTGGGCGGCGAGGTaGCCAGCGCTCTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSSWAAR*PALWLG
Trigger: TCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCT...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGTTTTGTCTCTTCAACTaGGACTCCACTGTCATTATC +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALFCLFN*DSTVII
Trigger: GATAATGACAGTGGAGTCCCAGTTGAAGAGACAAAA...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTCAGCAGTTGGGTCTTTaGTCTTTGCCCATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TALLFLLTVGLPVARISFQQLGL*SLPILL
Trigger: GAGAAGAATGGGCAAAGACCAAAGACCCAACTGCTG...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
3UTR CAA 72 bp CCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTaGCCAGTTGCCAGGATTTCCTTTATTACATACCAT +
Preference number: 4 (lower is better)
Translates to: PGTALLFLLTVG*PVARISFITYH
Trigger: ATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGTCTTTTCCTATTTCATaGACAACGAAGTCGGAGTAT +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALSFPIS*TTKSEY
Trigger: ATACTCCGACTTCGTTGTTCATGAAATAGGAAAAGA...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGCTACTTAGGAGGCTaGGGTGGGAGAGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSSYLGG*GGRVTG
Trigger: TCCAGTGACTCTCCCACCTCAGCCTCCTAAGTAGCT...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CGTGGGTTTGCCAGTTGCCAGGATTTCCTTTATTACATACCATGTGTTGGGCTAATGCAACGACTTCCCTaGAGTCAGGAGTTTGACACC +
Preference number: 4 (lower is better)
Translates to: RGFASCQDFLYYIPCVGLMQRLP*SQEFDT
Trigger: GGTGTCAAACTCCTGACTTCAGGGAAGTCGTTGCAT...TAGCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTTGGGTCTTTGGTCTTTaGCCATTCTTCTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: TLKMASWHSPALFVDRGFWVFGL*PFFSAF
Trigger: AAATGCAGAGAAGAATGGGCAAAGACCAAAGACCCA...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCGGCCAGCGCTCTGGTTaGGACGCAAGAGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFGQRSG*DARERR
Trigger: TCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCC...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACAACTCACAAACTTGGTaGTGCCTACGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHNSQTW*CLRQPQ
Trigger: CTGAGGCTGACGTAGGCATCACCAAGTTTGTGAGTT...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTTGGTTTCCTTATTTTTaGACAGCTGGAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TALLFLLTVGLPVARISFWFPYF*TAGALP
Trigger: TGGAAGAGCTCCAGCTGTTCAAAAATAAGGAAACCA...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TTCTTGAATTTTATGCTTTGGGTAGATAACATCGAAACCAGGCAAGGGCATTACTGGCTGTGGCTCCTTTaGGAACGAGGTCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FLNFMLWVDNIETRQGHYWLWLL*ERGPLE
Trigger: TTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCA...GTAATGCCCTTGCCTGGTTTCGATGTTATCTACCCAAAGCATAAAATTCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTATCTTCGACAACCAGTaGCCCACGTTTCAGCGACAC +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSIFDNQ*PTFQRH
Trigger: GTGTCGCTGAAACGTGGGGCACTGGTTGTCGAAGAT...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTAGTCCTCGAAGCAGCTaGCCTTCCACACACCTTTTG +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICSPRSS*PSTHLL
Trigger: CAAAAGGTGTGTGGAAGGGCAGCTGCTTCGAGGACT...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGGGGTATTATGCCAAATaGAGAGACTATATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EPGRSRLQCKIENCRIALGYYAK*RDYILH
Trigger: ATGAAGAATATAGTCTCTGCATTTGGCATAATACCC...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTCTGTGGACAAGGTACTaGTCAGCGAAGCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICLWTRY*SAKPGC
Trigger: ACAACCTGGCTTCGCTGAGCAGTACCTTGTCCACAG...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTATCTGAGGGCAGCAGTTaGGTCTTTGGTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLSEGSS*VFGLCP
Trigger: TGGGCAAAGACCAAAGACCCAACTGCTGCCCTCAGA...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTGAGGCACGTCTTCACTaGTGGACAGAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGEARLH*WTESHS
Trigger: AGAATGACTTTCTGTCCATCAGTGAAGACGTGCCTC...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGAGGCACGTCTTCACTaGTGGACAGAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHEARLH*WTESHS
Trigger: AGAATGACTTTCTGTCCATCAGTGAAGACGTGCCTC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTACACCTTTCCCAGTACTaGCAGTGTCAGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVHLSQY*QCQEAE
Trigger: CTCGGCCTCCTGACACTGTCAGTACTGGGAAAGGTG...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTCTACGTCAGCCTCAGTaGGTCCATGCTTCATCATGT +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICLRQPQ*VHASSC
Trigger: ACATGATGAAGCATGGACTCACTGAGGCTGACGTAG...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTCGGTAGGCCCCTGACAAGGAATAATCTCGAATTTTGTGTCTCATGTTGTCAAAACTCACAAACTTGGTaGTGCCTACGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FGRPLTRNNLEFCVSCCQNSQTW*CLRQPQ
Trigger: CTGAGGCTGACGTAGGCATCACCAAGTTTGTGAGTT...TTGACAACATGAGACACAAAATTCGAGATTATTCCTTGTCAGGGGCCTACCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp CTCAATATAGGTGGCTGTGGCTCCTTTGAGAACGAGGTCCCCTGGAACAGGTTTTCTTTTCCTATTTCATaGACAACGAAGTCGGAGTAT +
Preference number: 4 (lower is better)
Translates to: LNIGGCGSFENEVPWNRFSFPIS*TTKSEY
Trigger: ATACTCCGACTTCGTTGTTCATGAAATAGGAAAAGA...AAACCTGTTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCACCTATATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACCAAGATTGTCAGCTGTaGGCATTTCCCTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHQDCQL*AFPCRL
Trigger: AAGCCTACAGGGAAATGCTCACAGCTGACAATCTTG...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGCTGCAGTGCAAGATTaGGAATTGCAGGATTGCACT +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHAAVQD*ELQDCT
Trigger: AGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTCGTCAGCTAACATTCTaGGGACGAATAATGATCTTT +
Preference number: 4 (lower is better)
Translates to: TALLFLLTVGLPVARISFRQLTF*GRIMIF
Trigger: AAAGATCATTATTCGTCCTCAGAATGTTAGCTGACG...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTAGCCTTTTTCCCAGCTaGGTGGTAGGCTACAATGTA +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGSLFPS*VVGYNV
Trigger: TACATTGTAGCCTACCACGCAGCTGGGAAAAAGGCT...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTACTGGGAGGTCGAGGCTaGAGTGCAAGATTGAGAATT +
Preference number: 4 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLLGGRG*SARLRI
Trigger: AATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAG...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp GCCTGGGTGACTAGTGAAACTCCGTCAGCTAACATTCTGAGGACGAATAATGATCGTGGGTTTGCCAGTTaGCAGGATTTCCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: AWVTSETPSANILRTNNDRGFAS*QDFLYY
Trigger: GTAATAAAGGAAATCCTGGCAACTGGCAAACCCACG...ATCATTATTCGTCCTCAGAATGTTAGCTGACGGAGTTTCACTAGTCACCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTTTTTGTCTCTTCAACTaGGACTCCACTGTCATTATC +
Preference number: 4 (lower is better)
Translates to: TALLFLLTVGLPVARISFFCLFN*DSTVII
Trigger: GATAATGACAGTGGAGTCCCAGTTGAAGAGACAAAA...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCCACCTTTCCCAGTACTaGCAGTGTCAGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFHLSQY*QCQEAE
Trigger: CTCGGCCTCCTGACACTGTCAGTACTGGGAAAGGTG...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTCCTCATCTTCCAACTaGGCCTCAGAATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHSSSSN*ASEFFP
Trigger: TGGAAAGAATTCTGAGGCTCAGTTGGAAGATGAGGA...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTACTCCTCGCACTCCTCTaGAAGTCCATCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVLLALL*KSIFLL
Trigger: GAGGAGGAAGATGGACTTTCAGAGGAGTGCGAGGAG...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTCTTGAATTTTATGCTTTGGGTAGATAACATCGAAACCAGGCAAGGGCATTACGTCTGCAAAACTCTCTaGTTCCTCCTCCTCGCACTC +
Preference number: 4 (lower is better)
Translates to: FLNFMLWVDNIETRQGHYVCKTL*FLLLAL
Trigger: GAGTGCGAGGAGGAGGAATCAGAGAGTTTTGCAGAC...GTAATGCCCTTGCCTGGTTTCGATGTTATCTACCCAAAGCATAAAATTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp GCCTGGGTGACTAGTGAAACTCCGTCAGCTAACATTCTGAGGACGAATAATGATAGTCATTCAAATGGCTaGTCCGTCCATCTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: AWVTSETPSANILRTNNDSHSNG*SVHLFL
Trigger: TAGGAAAAGATGGACGGATCAGCCATTTGAATGACT...ATCATTATTCGTCCTCAGAATGTTAGCTGACGGAGTTTCACTAGTCACCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGTAAATATGTCTTCTaGAGGGTCCTCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHCKYVF*RVLLIH
Trigger: GTGGATGAGGAGGACCCTTCAGAAGACATATTTACA...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTTGTAAATATGTCTTCTaGAGGGTCCTCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGCKYVF*RVLLIH
Trigger: GTGGATGAGGAGGACCCTTCAGAAGACATATTTACA...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATCAAGATTGTCAGCTGTaGGCATTTCCCTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNQDCQL*AFPCRL
Trigger: AAGCCTACAGGGAAATGCTCACAGCTGACAATCTTG...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTACTTTCGGTAGGCCCCTaGCAAGGAATAATCTCGAAT +
Preference number: 4 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLLSVGP*QGIISN
Trigger: ATTCGAGATTATTCCTTGTCAGGGGCCTACCGAAAG...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTTACCAAAGCCACTGGTaGCAAAGGGTAAACGCTACT +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICYQSHW*QRVNAT
Trigger: AGTAGCGTTTACCCTTTGTCACCAGTGGCTTTGGTA...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGACCTTTGGTTAGACTaGATTCCGACAGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHDLWLD*IPTASV
Trigger: AACAGAAGCTGTCGGAATGCAGTCTAACCAAAGGTC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CGTGGGTTTGCCAGTTGCCAGGATTTCCTTTATTACATACCATGTGTTGGGCTAAGCTCTTCCAATCGCTaGTTTTCTTCAGCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: RGFASCQDFLYYIPCVGLSSSNR*FSSAVK
Trigger: TTTGACAGCTGAAGAAAAGCAGCGATTGGAAGAGCT...TAGCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTAGCCTTTTTCCCAGCTaGGTGGTAGGCTACAATGTA +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICSLFPS*VVGYNV
Trigger: TACATTGTAGCCTACCACGCAGCTGGGAAAAAGGCT...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACCAGGTTGTATTCAGCTaGGTCTGGTTCTTGATACTG +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHQVVFS*VWFLIL
Trigger: CAGTATCAAGAACCAGACGCAGCTGAATACAACCTG...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTGCCCATCTTGACCTTTaGTTAGACTGCATTCCGACA +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSAHLDL*LDCIPT
Trigger: TGTCGGAATGCAGTCTAACCAAAGGTCAAGATGGGC...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCACTTAGGAGGCTGAGGTaGGAGAGTCACTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSLRRLR*ESHWSL
Trigger: CAGGCTCCAGTGACTCTCCCACCTCAGCCTCCTAAG...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR CAA 72 bp AAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTaGTGTACGTTTTCTAATCTGTGGACAAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: KTKMHREPGSKH*CTFSNLWTRYC
Trigger: GCAGTACCTTGTCCACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR CAA 72 bp GGTGGTGTCTTCCCTTCTAGGTTGTCCACATCTGTGTaGAAAAGTGGAATTTTGGGATCATCATATGCAACG +
Preference number: 4 (lower is better)
Translates to: GGVFPSRLSTSV*KSGILGSSYAT
Trigger: CGTTGCATATGATGATCCCAAAATTCCACTTTTCAACACAGATGTGGACAACCTAGAAGGGAAGACACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATTTCTGTAGCCCATCTTaGCCTTTGGTTAGACTGCAT +
Preference number: 4 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNFCSPS*PLVRLH
Trigger: ATGCAGTCTAACCAAAGGTCAAGATGGGCTACAGAA...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCACTCCTCGCACTCCTCTaGAAGTCCATCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSLLALL*KSIFLL
Trigger: GAGGAGGAAGATGGACTTTCAGAGGAGTGCGAGGAG...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTAGTCATTCAAATGGCTaGTCCGTCCATCTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGSHSNG*SVHLFL
Trigger: TAGGAAAAGATGGACGGATCAGCCATTTGAATGACT...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATGTGAAGTGGTTTCCTTaGAGCTCTCCCAATTTCAGT +
Preference number: 4 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNVKWFP*SSPNFS
Trigger: ACTGAAATTGGGAGAGCTTCAAGGAAACCACTTCAC...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTCTTCATTCCATATTTTaGAAGTCCTCGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGLHSIF*KSSKQL
Trigger: CAGCTGCTTCGAGGACTTTCAAAATATGGAATGAAG...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGCTGCGTCTGGTTCTTaGTACTGGTATCCATTTTTA +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHAASGS*YWYPFL
Trigger: TAAAAATGGATACCAGTATCAAGAACCAGACGCAGC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATGACCTTTGGTTAGACTaGATTCCGACAGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNDLWLD*IPTASV
Trigger: AACAGAAGCTGTCGGAATGCAGTCTAACCAAAGGTC...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACAGCTCTTCCAATCGCTaGTTTTCTTCAGCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHSSSNR*FSSAVK
Trigger: TTTGACAGCTGAAGAAAAGCAGCGATTGGAAGAGCT...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTGTGGGCAAGTCTTTGTaGAGTTATTTTGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGVGKSL*SYFENS
Trigger: GCTGTTCTCAAAATAACTGCACAAAGACTTGCCCAC...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTTGGGTCTTTGGTCTTTaGCCATTCTTCTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGWVFGL*PFFSAF
Trigger: AAATGCAGAGAAGAATGGGCAAAGACCAAAGACCCA...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTTCAGAGCCCTGTATTTaGCTTCAGAAGCAAAAACTG +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGSEPCI*LQKQKL
Trigger: CAGTTTTTGCTTCTGAAGGCAAATACAGGGCTCTGA...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGAACTAAGACAAAAATaGACAGGGAGCCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLELRQK*TGSQEA
Trigger: TGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGTTC...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAAAATGGGCCTATCAATaGAACGTTCCTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLKWAYQ*NVPARH
Trigger: ATGCCTTGCAGGAACGTTGCATTGATAGGCCCATTT...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTGTCCTCCTCATCCACTaGAATGGACAAGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICVLLIH*NGQVIQ
Trigger: TTGAATGACTTGTCCATTCCAGTGGATGAGGAGGAC...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTAAGCACTTATTCAGGTaGGCAAGTCTTTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGKHLFR*ASLCAV
Trigger: AACTGCACAAAGACTTGCCCACCTGAATAAGTGCTT...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTGTATTCAGCTGCGTCTaGTTCTTGATACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICVFSCV*FLILVS
Trigger: GGATACCAGTATCAAGAACCAGACGCAGCTGAATAC...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTACGTTTTCTAATCTGTaGACAAGGTACTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSTFSNL*TRYCSA
Trigger: CGCTGAGCAGTACCTTGTCCACAGATTAGAAAACGT...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCGTCTGCAAAACTCTCTaGTTCCTCCTCCTCGCACTC +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFVCKTL*FLLLAL
Trigger: GAGTGCGAGGAGGAGGAATCAGAGAGTTTTGCAGAC...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAGTCTGCAAAACTCTCTaGTTCCTCCTCCTCGCACTC +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSVCKTL*FLLLAL
Trigger: GAGTGCGAGGAGGAGGAATCAGAGAGTTTTGCAGAC...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTTGGTTTCCTTATTTTTaGACAGCTGGAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSWFPYF*TAGALP
Trigger: TGGAAGAGCTCCAGCTGTTCAAAAATAAGGAAACCA...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCCTTAATGAATTACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTAGAGATTTGATAGCCTaGTGGATGATGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLMNYPKDGFLAQPCSFCRDLIA*WMMVLF
Trigger: GAAAAGAACCATCATCCATCAGGCTATCAAATCTCT...ACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGTAATTCATTAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCATCTTCGACAACCAGTaGCCCACGTTTCAGCGACAC +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFIFDNQ*PTFQRH
Trigger: GTGTCGCTGAAACGTGGGGCACTGGTTGTCGAAGAT...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTAGCTCTTCCAATCGCTaGTTTTCTTCAGCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICSSSNR*FSSAVK
Trigger: TTTGACAGCTGAAGAAAAGCAGCGATTGGAAGAGCT...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTGTGGGCAAGTCTTTGTaGAGTTATTTTGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSVGKSL*SYFENS
Trigger: GCTGTTCTCAAAATAACTGCACAAAGACTTGCCCAC...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTATGGGTCTTTGGTCTTTaGCCATTCTTCTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLWVFGL*PFFSAF
Trigger: AAATGCAGAGAAGAATGGGCAAAGACCAAAGACCCA...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCAGTCCTCGAAGCAGCTaGCCTTCCACACACCTTTTG +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFSPRSS*PSTHLL
Trigger: CAAAAGGTGTGTGGAAGGGCAGCTGCTTCGAGGACT...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTATTTGGGATCATCATATaGAACGACTTCCCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLFGIII*NDFPAN
Trigger: GTTAGCTGGGAAGTCGTTGCATATGATGATCCCAAA...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCACTGTGGACAAGGTACTaGTCAGCGAAGCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSLWTRY*SAKPGC
Trigger: ACAACCTGGCTTCGCTGAGCAGTACCTTGTCCACAG...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATTTTGGGATCATCATATaGAACGACTTCCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNFGIII*NDFPEV
Trigger: GACTTCAGGGAAGTCGTTGCATATGATGATCCCAAA...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCATCTGAGGGCAGCAGTTaGGTCTTTGGTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSSEGSS*VFGLCP
Trigger: TGGGCAAAGACCAAAGACCCAACTGCTGCCCTCAGA...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
3UTR CAA 72 bp TCTAGGTTGTCCACATCTGTGTTGAAAAGTGGAATTTaGGGATCATCATATGCAACGACTTCCCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SRLSTSVLKSGI*GSSYATTSLKS
Trigger: TGACTTCAGGGAAGTCGTTGCATATGATGATCCCAAAATTCCACTTTTCAACACAGATGTGGACAACCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TTCTTGAATTTTATGCTTTGGGTAGATAACATCGAAACCAGGCAAGGGCATTACTGTAAATATGTCTTCTaGAGGGTCCTCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: FLNFMLWVDNIETRQGHYCKYVF*RVLLIH
Trigger: GTGGATGAGGAGGACCCTTCAGAAGACATATTTACA...GTAATGCCCTTGCCTGGTTTCGATGTTATCTACCCAAAGCATAAAATTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAAGAGATTTGATAGCCTaGTGGATGATGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLRDLIA*WMMVLF
Trigger: GAAAAGAACCATCATCCATCAGGCTATCAAATCTCT...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCATAGCTCTTCCAACCTaGTACGTAGGGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFIALPT*YVGTAV
Trigger: CACAGCTGTCCCTACGTATCAGGTTGGAAGAGCTAT...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTTCCCAGCTAACATTCTaGGGACGAATAATGATCTTT +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSSQLTF*GRIMIF
Trigger: AAAGATCATTATTCGTCCTCAGAATGTTAGCTGGGA...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTGCTGACATTTTACTCTaGTTTAAGCACCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: QKCTGSQEANTCVRFLICADILL*FKHLKC
Trigger: ACACTTCAGGTGCTTAAATCAGAGTAAAATGTCAGC...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCCTGGGAGGTCGAGGCTaGAGTGCAAGATTGAGAATT +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFLGGRG*SARLRI
Trigger: AATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAG...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTGAGAAGTTTATGCAATaGCAGACATGGAAATACCAA +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGEKFMQ*QTWKYQ
Trigger: TTGGTATTTCCATGTCTGGCATTGCATAAACTTCTC...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTTTTTGTCTCTTCAACTaGGACTCCACTGTCATTATC +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSFCLFN*DSTVII
Trigger: GATAATGACAGTGGAGTCCCAGTTGAAGAGACAAAA...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAGCCCATCTTGACCTTTaGTTAGACTGCATTCCGACA +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVAHLDL*LDCIPT
Trigger: TGTCGGAATGCAGTCTAACCAAAGGTCAAGATGGGC...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTGCCCATCTTGACCTTTaGTTAGACTGCATTCCGACA +
Preference number: 4 (lower is better)
Translates to: FLYYIPCVGLSATSSSFSAHLDL*LDCIPT
Trigger: TGTCGGAATGCAGTCTAACCAAAGGTCAAGATGGGC...AGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTGACAAGTCATTCAAATaGCTGATCCGTCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSDKSFK*LIRPSF
Trigger: AAAAGATGGACGGATCAGCCATTTGAATGACTTGTC...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTATAGCTTGCTGTACTTaGTCATCAGTTCCTGTTATA +
Preference number: 4 (lower is better)
Translates to: SHQRSLCNARHGNTKATGIACCT*SSVPVI
Trigger: TATAACAGGAACTGATGACCAAGTACAGCAAGCTAT...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTATTCTGTAGCCCATCTTaGCCTTTGGTTAGACTGCAT +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVFCSPS*PLVRLH
Trigger: ATGCAGTCTAACCAAAGGTCAAGATGGGCTACAGAA...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTTCCTCATCTTCCAACTaGGCCTCAGAATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FLYYIPCVGLSATSSSFSSSSSN*ASEFFP
Trigger: TGGAAAGAATTCTGAGGCTCAGTTGGAAGATGAGGA...AGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTTCTTTTCCTATTTCATaGACAACGAAGTCGGAGTAT +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSSFPIS*TTKSEY
Trigger: ATACTCCGACTTCGTTGTTCATGAAATAGGAAAAGA...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCCAAGATTGTCAGCTGTaGGCATTTCCCTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFQDCQL*AFPCRL
Trigger: AAGCCTACAGGGAAATGCTCACAGCTGACAATCTTG...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCCTTTCGGTAGGCCCCTaGCAAGGAATAATCTCGAAT +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFLSVGP*QGIISN
Trigger: ATTCGAGATTATTCCTTGTCAGGGGCCTACCGAAAG...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCTACCAAAGCCACTGGTaGCAAAGGGTAAACGCTACT +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFYQSHW*QRVNAT
Trigger: AGTAGCGTTTACCCTTTGTCACCAGTGGCTTTGGTA...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGTCTTCTATCCTCTTaGTTACCATGTTATTCCACA +
Preference number: 4 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSSLLSS*LPCYST
Trigger: TGTGGAATAACATGGTAAGCAAGAGGATAGAAGACT...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTACAGGTTGTATTCAGCTaGGTCTGGTTCTTGATACTG +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVQVVFS*VWFLIL
Trigger: CAGTATCAAGAACCAGACGCAGCTGAATACAACCTG...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCGTCCTCCTCATCCACTaGAATGGACAAGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: FPLLHTMCWAKCNFLFFFVLLIH*NGQVIQ
Trigger: TTGAATGACTTGTCCATTCCAGTGGATGAGGAGGAC...GAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCACAGCAGTTGGGTCTTTaGTCTTTGCCCATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSQQLGL*SLPILL
Trigger: GAGAAGAATGGGCAAAGACCAAAGACCCAACTGCTG...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTTAAGCGATTATTTCTaGGTATTATGCCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHLSDYF*VLCQMQ
Trigger: CTGCATTTGGCATAATACCCAGAAATAATCGCTTAA...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAGTATTCAGCTGCGTCTaGTTCTTGATACTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVVFSCV*FLILVS
Trigger: GGATACCAGTATCAAGAACCAGACGCAGCTGAATAC...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAACGTTTTCTAATCTGTaGACAAGGTACTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVTFSNL*TRYCSA
Trigger: CGCTGAGCAGTACCTTGTCCACAGATTAGAAAACGT...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTCTTGAATTTTATGCTTTGGGTAGATAACATCGAAACCAGGCAAGGGCATTACTTACATACCATGTGTTaGGCTAAGTGCAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: FLNFMLWVDNIETRQGHYLHTMC*AKCNFL
Trigger: GAGGAAGTTGCACTTAGCCCAACACATGGTATGTAA...GTAATGCCCTTGCCTGGTTTCGATGTTATCTACCCAAAGCATAAAATTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCTTCTGTAGCCCATCTTaGCCTTTGGTTAGACTGCAT +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFFCSPS*PLVRLH
Trigger: ATGCAGTCTAACCAAAGGTCAAGATGGGCTACAGAA...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCATCCTCATCTTCCAACTaGGCCTCAGAATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSSSSSN*ASEFFP
Trigger: TGGAAAGAATTCTGAGGCTCAGTTGGAAGATGAGGA...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAAGTCATTCAAATGGCTaGTCCGTCCATCTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVSHSNG*SVHLFL
Trigger: TAGGAAAAGATGGACGGATCAGCCATTTGAATGACT...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAGTGAAGTGGTTTCCTTaGAGCTCTCCCAATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSVKWFP*SSPNFS
Trigger: ACTGAAATTGGGAGAGCTTCAAGGAAACCACTTCAC...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAGCTGCGTCTGGTTCTTaGTACTGGTATCCATTTTTA +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVAASGS*YWYPFL
Trigger: TAAAAATGGATACCAGTATCAAGAACCAGACGCAGC...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAGACCTTTGGTTAGACTaGATTCCGACAGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSDLWLD*IPTASV
Trigger: AACAGAAGCTGTCGGAATGCAGTCTAACCAAAGGTC...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTGTGGGCAAGTCTTTGTaGAGTTATTTTGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: FLYYIPCVGLSATSSSFSVGKSL*SYFENS
Trigger: GCTGTTCTCAAAATAACTGCACAAAGACTTGCCCAC...AGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR GCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAGAACTAAGACAAAAATaGACAGGGAGCCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSELRQK*TGSQEA
Trigger: TGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGTTC...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCAAATGGGCCTATCAATaGAACGTTCCTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFKWAYQ*NVPARH
Trigger: ATGCCTTGCAGGAACGTTGCATTGATAGGCCCATTT...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCGTCCTCCTCATCCACTaGAATGGACAAGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFVLLIH*NGQVIQ
Trigger: TTGAATGACTTGTCCATTCCAGTGGATGAGGAGGAC...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAAAGCACTTATTCAGGTaGGCAAGTCTTTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVKHLFR*ASLCAV
Trigger: AACTGCACAAAGACTTGCCCACCTGAATAAGTGCTT...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTAAGCACTTATTCAGGTaGGCAAGTCTTTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FLYYIPCVGLSATSSSFSKHLFR*ASLCAV
Trigger: AACTGCACAAAGACTTGCCCACCTGAATAAGTGCTT...AGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp TTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTTCTTCTTTTTCTCCATaGATAGGATTCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLYYIPCVGLSATSSSFSSSFSP*IGFHLL
Trigger: CAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGA...AGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCATGGTTTCCTTATTTTTaGACAGCTGGAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSWFPYF*TAGALP
Trigger: TGGAAGAGCTCCAGCTGTTCAAAAATAAGGAAACCA...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCCTTCATTCCATATTTTaGAAGTCCTCGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFLHSIF*KSSKQL
Trigger: CAGCTGCTTCGAGGACTTTCAAAATATGGAATGAAG...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCATCAGAGCCCTGTATTTaGCTTCAGAAGCAAAAACTG +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSSEPCI*LQKQKL
Trigger: CAGTTTTTGCTTCTGAAGGCAAATACAGGGCTCTGA...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTATGTGTTGGGCTAAGTaGAACTTCCTCTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: FLYYIPCVGLSATSSSFSMCWAK*NFLFFF
Trigger: GAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACAT...AGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAGACAAGTCATTCAAATaGCTGATCCGTCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVDKSFK*LIRPSF
Trigger: AAAAGATGGACGGATCAGCCATTTGAATGACTTGTC...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCTGACAAGTCATTCAAATaGCTGATCCGTCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: FLYYIPCVGLSATSSSFSDKSFK*LIRPSF
Trigger: AAAAGATGGACGGATCAGCCATTTGAATGACTTGTC...AGAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CCA 90 bp TTCTTGAATTTTATGCTTTGGGTAGATAACATCGAAACCAGGCAAGGGCATTACATAGCTTGCTGTACTTaGTCATCAGTTCCTGTTATA +
Preference number: 4 (lower is better)
Translates to: FLNFMLWVDNIETRQGHYIACCT*SSVPVI
Trigger: TATAACAGGAACTGATGACCAAGTACAGCAAGCTAT...GTAATGCCCTTGCCTGGTTTCGATGTTATCTACCCAAAGCATAAAATTCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR TCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCTCCCAGCTAACATTCTaGGGACGAATAATGATCTTT +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFSQLTF*GRIMIF
Trigger: AAAGATCATTATTCGTCCTCAGAATGTTAGCTGGGA...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAAGTCTTCTATCCTCTTaGTTACCATGTTATTCCACA +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSSLLSS*LPCYST
Trigger: TGTGGAATAACATGGTAAGCAAGAGGATAGAAGACT...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCGAGAAGTTTATGCAATaGCAGACATGGAAATACCAA +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFEKFMQ*QTWKYQ
Trigger: TTGGTATTTCCATGTCTGGCATTGCATAAACTTCTC...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCATAGCTTGCTGTACTTaGTCATCAGTTCCTGTTATA +
Preference number: 4 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFIACCT*SSVPVI
Trigger: TATAACAGGAACTGATGACCAAGTACAGCAAGCTAT...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CCA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTATTAAGCGATTATTTCTaGGTATTATGCCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: LYTPSQMCQILLLSFENVLSDYF*VLCQMQ
Trigger: CTGCATTTGGCATAATACCCAGAAATAATCGCTTAA...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR GCA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAGGGTATTATGCCAAATaGAGAGACTATATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSGYYAK*RDYILH
Trigger: ATGAAGAATATAGTCTCTGCATTTGGCATAATACCC...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS CCA 90 bp GCCGGAGCCTGGGAGCGCGGGCGCGGCGTGAGCTGGGCGGCGAGGTaGCCAGCGCTCTGGTTGGGACGCAAGAGAGCGGCGAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: AGAWERGRGVSWAAR*PALWLGRKRAAKAT
Trigger: AGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCGCCCGCGCTCCCAGGCTCCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356362.6
CDS CCA 90 bp CCCGGAGCCTGGGAGCGCGGGCGCGGCGTGAGCTGGGCGGCGAGGTaGCCAGCGCTCTGGTTGGGACGCAAGAGAGCGGCGAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: PGAWERGRGVSWAAR*PALWLGRKRAAKAT
Trigger: AGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCGCCCGCGCTCCCAGGCTCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469408.6
ENST00000481939.5
CDS CCA 90 bp GAGCGCGGGCGCGGCGTGAGCTGGGCGGCGAGGTGGCCAGCGCTCTaGTTGGGACGCAAGAGAGCGGCGAAGGCCACTTGGATGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ERGRGVSWAARWPAL*LGRKRAAKATWMSQ
Trigger: CTGGCTCATCCAAGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCGCCCGCGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CCA 90 bp TCCATCTTTAAGGCCGGAGCCTGGGAGCGCGGGCGCGGCGTGAGCTaGGCGGCGAGGTGGCCAGCGCTCTGGTTGGGACGCAAGAGAGCG +
Preference number: 5 (lower is better)
Translates to: SIFKAGAWERGRGVS*AARWPALWLGRKRA
Trigger: CGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCGCCCGCGCTCCCAGGCTCCGGCCTTAAAGATGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356362.6
CDS TCA 90 bp TCATCTCCATCTTTAAGGCCGGAGCCTGGGAGCGCGGGCGCGGCGTaGGCTGGGCGGCGAGGTGGCCAGCGCTCTGGTTGGGACGCAAGA +
Preference number: 5 (lower is better)
Translates to: SSPSLRPEPGSAGAA*AGRRGGQRSGWDAR
Trigger: TCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCGCCCGCGCTCCCAGGCTCCGGCCTTAAAGATGGAGATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356362.6
CDS CCA 90 bp CATTTAAGAAAACCCGGAGCCTGGGAGCGCGGGCGCGGCGTGAGCTaGGCGGCGAGGTGGCCAGCGCTCTGGTTGGGACGCAAGAGAGCG +
Preference number: 5 (lower is better)
Translates to: HLRKPGAWERGRGVS*AARWPALWLGRKRA
Trigger: CGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCGCCCGCGCTCCCAGGCTCCGGGTTTTCTTAAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469408.6
ENST00000481939.5
CDS CCA 90 bp TGGCCAGCGCTCTGGTTGGGACGCAAGAGAGCGGCGAAGGCCACTTaGATGAGCCAGCGGCTAGGGCGGCCAGGCAAAAGCAGCGCTTTC +
Preference number: 5 (lower is better)
Translates to: WPALWLGRKRAAKAT*MSQRLGRPGKSSAF
Trigger: GAAAGCGCTGCTTTTGCCTGGCCGCCCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS-3UTR CAA 90 bp CTCAATATAGGTGGCTGTGGCTCCTTTGAGAACGAGGTCCCCTGGAACAGGTTTTGGCCAGCGCTCTGGTaGGGACGCAAGAGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: LNIGGCGSFENEVPWNRFWPALW*GRKRAA
Trigger: CGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCA...AAACCTGTTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCACCTATATTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTAGCGGCGAAGGCCACTaGGATGAGCCAGCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: SHQRSLCNARHGNTKATGSGEGH*DEPAAR
Trigger: CCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGCT...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTATGGCCAGCGCTCTGGTaGGGACGCAAGAGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLWPALW*GRKRAA
Trigger: CGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCA...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTAGCGGCGAAGGCCACTaGGATGAGCCAGCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: QKCTGSQEANTCVRFLICSGEGH*DEPAAR
Trigger: CCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGCT...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCCTCTTCTTTTTCTCCATGGATAGGATTCCACCTGCTGGCTCTTTCCTATAATAGCGGCGAAGGCCACTaGGATGAGCCAGCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: SSSFSPWIGFHLLALSYNSGEGH*DEPAAR
Trigger: CCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGCT...ATTATAGGAAAGAGCCAGCAGGTGGAATCCTATCCATGGAGAAAAAGAAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGTGGCTGTGGCTCCTTaGAGAACGAGGTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHVAVAP*RTRSPG
Trigger: TCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCAC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTACAGCCCTGCTCTTTTaGTTGACCGTGGGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: TALLFLLTVGLPVARISFTALLF*LTVGLP
Trigger: TGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS GCA 90 bp GAACTCACAAACTTGGTGATGCCTACGTCAGCCTCAGTGAGTCCATaGTTCATCATGTCTGCAAAACTCTCTGATTCCTCCTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: ELTNLVMPTSASVSP*FIMSAKLSDSSSSH
Trigger: GTGCGAGGAGGAGGAATCAGAGAGTTTTGCAGACATGATGAAGCATGGACTCACTGAGGCTGACGTAGGCATCACCAAGTTTGTGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CCA 90 bp CACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTaGACAAGGTACTGCTCAGCGAAGCCAGGTTGTATTCAGCTGCGT +
Preference number: 5 (lower is better)
Translates to: HREPGSKHLCTFSNL*TRYCSAKPGCIQLR
Trigger: ACGCAGCTGAATACAACCTGGCTTCGCTGAGCAGTACCTTGTCCACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTCGGTAGGCCCCTGACAAGGAATAATCTCGAATTTTGTGTCTCATGTTGTCAAGTGGCTGTGGCTCCTTaGAGAACGAGGTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: FGRPLTRNNLEFCVSCCQVAVAP*RTRSPG
Trigger: TCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCAC...TTGACAACATGAGACACAAAATTCGAGATTATTCCTTGTCAGGGGCCTACCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGCCAGGAAGCAAACACTaGTGTACGTTTTCTAATCTG +
Preference number: 5 (lower is better)
Translates to: EPGRSRLQCKIENCRIALPGSKH*CTFSNL
Trigger: CAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGG...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS TCA 90 bp GTACTGCTCAGCGAAGCCAGGTTGTATTCAGCTGCGTCTGGTTCTTaGTACTGGTATCCATTTTTAGCACTTCTCGAATGGCCATGGTGG +
Preference number: 5 (lower is better)
Translates to: VLLSEARLYSAASGS*YWYPFLALLEWPWW
Trigger: CCACCATGGCCATTCGAGAAGTGCTAAAAATGGATACCAGTATCAAGAACCAGACGCAGCTGAATACAACCTGGCTTCGCTGAGCAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS GCA 90 bp TGTCTCTTCAACTGGGACTCCACTGTCATTATCTTCGACAACCAGTaGCCCACGTTTCAGCGACACACCAGTCATTTCTGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: CLFNWDSTVIIFDNQ*PTFQRHTSHFCHLH
Trigger: ATGGAGATGACAGAAATGACTGGTGTGTCGCTGAAACGTGGGGCACTGGTTGTCGAAGATAATGACAGTGGAGTCCCAGTTGAAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS-3UTR CAA 90 bp CTCAATATAGGTGGCTGTGGCTCCTTTGAGAACGAGGTCCCCTGGAACAGGTTTGATTCCCGAGAACCCTaGATGAGAACTCACAAACTT +
Preference number: 5 (lower is better)
Translates to: LNIGGCGSFENEVPWNRFDSREP*MRTHKL
Trigger: AAGTTTGTGAGTTCTCATCAAGGGTTCTCGGGAATC...AAACCTGTTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCACCTATATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTCTCAGCGAAGCCAGGTaGTATTCAGCTGCGTCTGGT +
Preference number: 5 (lower is better)
Translates to: SHQRSLCNARHGNTKATGLSEAR*YSAASG
Trigger: ACCAGACGCAGCTGAATACAACCTGGCTTCGCTGAG...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp GAGCCTGGGAGGTCGAGGCTGCAGTGCAAGATTGAGAATTGCAGGATTGCACTGGTACTGTATTTATATTaGTGGGTGGCAGCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: EPGRSRLQCKIENCRIALVLYLY*WVAALK
Trigger: TTTGAGAGCTGCCACCCACAAATATAAATACAGTAC...CAGTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCCTCGACCTCCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTCTCAGCGAAGCCAGGTaGTATTCAGCTGCGTCTGGT +
Preference number: 5 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSLSEAR*YSAASG
Trigger: ACCAGACGCAGCTGAATACAACCTGGCTTCGCTGAG...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS GCA 90 bp ATCTGTGGACAAGGTACTGCTCAGCGAAGCCAGGTTGTATTCAGCTaGGTCTGGTTCTTGATACTGGTATCCATTTTTAGCACTTCTCGA +
Preference number: 5 (lower is better)
Translates to: ICGQGTAQRSQVVFS*VWFLILVSIFSTSR
Trigger: TCGAGAAGTGCTAAAAATGGATACCAGTATCAAGAACCAGACGCAGCTGAATACAACCTGGCTTCGCTGAGCAGTACCTTGTCCACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS GCA 90 bp GGAAGCAAACACTTGTGTACGTTTTCTAATCTGTGGACAAGGTACTaGTCAGCGAAGCCAGGTTGTATTCAGCTGCGTCTGGTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: GSKHLCTFSNLWTRY*SAKPGCIQLRLVLD
Trigger: ATCAAGAACCAGACGCAGCTGAATACAACCTGGCTTCGCTGAGCAGTACCTTGTCCACAGATTAGAAAACGTACACAAGTGTTTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp ACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTGCCAGTTGCCAGGATTTCCTTTATGGTTCTTTTCTCTTaGGTGTCCTCGATAACCTCA +
Preference number: 5 (lower is better)
Translates to: TALLFLLTVGLPVARISFMVLFS*VSSITS
Trigger: TGAGGTTATCGAGGACACCAAAGAGAAAAGAACCAT...AAAGGAAATCCTGGCAACTGGCAAACCCACGGTCAACAAAAAGAGCAGGGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp ACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTTGACCGTGGGTTTAATGTTTTCTTGGATTaGCCAAAGCCTTTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: TLKMASWHSPALFVDRGFNVFLD*PKPFSQ
Trigger: CTGGGAAAAAGGCTTTGGCAAATCCAAGAAAACATT...AAACCCACGGTCAACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TCCTTAATGAATTACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTGCAGCAGTTGGGTCTTaGGTCTTTGCCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SLMNYPKDGFLAQPCSFCAAVGS*VFAHSS
Trigger: AGAAGAATGGGCAAAGACCAAAGACCCAACTGCTGC...ACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGTAATTCATTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp CTCAATATAGGTGGCTGTGGCTCCTTTGAGAACGAGGTCCCCTGGAACAGGTTTTTCCCTGTAGGCTTCTaGAATTTTATGCTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: LNIGGCGSFENEVPWNRFFPVGF*NFMLWV
Trigger: TACCCAAAGCATAAAATTCAAGAAGCCTACAGGGAA...AAACCTGTTCCAGGGGACCTCGTTCTCAAAGGAGCCACAGCCACCTATATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS TCA 90 bp AAGGGTCCTCCTCATCCACTGGAATGGACAAGTCATTCAAATGGCTaGTCCGTCCATCTTTTCCTATTTCATGAACAACGAAGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: KGPPHPLEWTSHSNG*SVHLFLFHEQRSRS
Trigger: ACTCCGACTTCGTTGTTCATGAAATAGGAAAAGATGGACGGATCAGCCATTTGAATGACTTGTCCATTCCAGTGGATGAGGAGGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS-3UTR CAA 90 bp GCCTGGGTGACTAGTGAAACTCCGTCAGCTAACATTCTGAGGACGAATAATGATAGTGAAGTGGTTTCCTaGAAGCTCTCCCAATTTCAG +
Preference number: 5 (lower is better)
Translates to: AWVTSETPSANILRTNNDSEVVS*KLSQFQ
Trigger: CTGAAATTGGGAGAGCTTCAAGGAAACCACTTCACT...ATCATTATTCGTCCTCAGAATGTTAGCTGACGGAGTTTCACTAGTCACCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGCAGCAGTTGGGTCTTaGGTCTTTGCCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLAAVGS*VFAHSS
Trigger: AGAAGAATGGGCAAAGACCAAAGACCCAACTGCTGC...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CGTGGGTTTGCCAGTTGCCAGGATTTCCTTTATTACATACCATGTGTTGGGCTAGTCTTCCCTTCTAGGTaGTCCACATCTGTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: RGFASCQDFLYYIPCVGLVFPSR*STSVLK
Trigger: TTTCAACACAGATGTGGACAACCTAGAAGGGAAGAC...TAGCCCAACACATGGTATGTAATAAAGGAAATCCTGGCAACTGGCAAACCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGGCTGCAGTGCAAGATaGAGAATTGCAGGATTGCAC +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLGCSAR*RIAGLH
Trigger: GTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCC...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGATTCCCGAGAACCCTaGATGAGAACTCACAAACTT +
Preference number: 5 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHDSREP*MRTHKL
Trigger: AAGTTTGTGAGTTCTCATCAAGGGTTCTCGGGAATC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTAGTGAAGTGGTTTCCTaGAAGCTCTCCCAATTTCAG +
Preference number: 5 (lower is better)
Translates to: SHQRSLCNARHGNTKATGSEVVS*KLSQFQ
Trigger: CTGAAATTGGGAGAGCTTCAAGGAAACCACTTCACT...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACGAGAGAGTTCATAGCTaGCTGTACTTGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHERVHS*LYLVIS
Trigger: ACTGATGACCAAGTACAGCAAGCTATGAACTCTCTC...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTGATTCCCGAGAACCCTaGATGAGAACTCACAAACTT +
Preference number: 5 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSDSREP*MRTHKL
Trigger: AAGTTTGTGAGTTCTCATCAAGGGTTCTCGGGAATC...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACATGGTTCTTTTCTCTTaGGTGTCCTCGATAACCTCA +
Preference number: 5 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHMVLFS*VSSITS
Trigger: TGAGGTTATCGAGGACACCAAAGAGAAAAGAACCAT...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACCCCTATCCTCTGTTTTaGTCTCTAATCCTGGAAACA +
Preference number: 5 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHPYPLF*SLILET
Trigger: TGTTTCCAGGATTAGAGACAAAAACAGAGGATAGGG...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGTGAAGTGGTTTCCTaGAAGCTCTCCCAATTTCAG +
Preference number: 5 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSSEVVS*KLSQFQ
Trigger: CTGAAATTGGGAGAGCTTCAAGGAAACCACTTCACT...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGAGAGAGTTCATAGCTaGCTGTACTTGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLERVHS*LYLVIS
Trigger: ACTGATGACCAAGTACAGCAAGCTATGAACTCTCTC...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS TCA 90 bp TCCTCTGTTTTTGTCTCTAATCCTGGAAACAGAGATTTGATAGCCTaGTGGATGATGGTTCTTTTCTCTTTGGTGTCCTCGATAACCTCC +
Preference number: 5 (lower is better)
Translates to: SSVFVSNPGNRDLIA*WMMVLFSLVSSITS
Trigger: GGAGGTTATCGAGGACACCAAAGAGAAAAGAACCATCATCCATCAGGCTATCAAATCTCTGTTTCCAGGATTAGAGACAAAAACAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482157.1
CDS-3UTR CAA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTCCCTATCCTCTGTTTTaGTCTCTAATCCTGGAAACA +
Preference number: 5 (lower is better)
Translates to: QKCTGSQEANTCVRFLICPYPLF*SLILET
Trigger: TGTTTCCAGGATTAGAGACAAAAACAGAGGATAGGG...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTAATGTTTTCTTGGATTaGCCAAAGCCTTTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SHQRSLCNARHGNTKATGNVFLD*PKPFSQ
Trigger: CTGGGAAAAAGGCTTTGGCAAATCCAAGAAAACATT...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp GCCTGGGTGACTAGTGAAACTCCGTCAGCTAACATTCTGAGGACGAATAATGATGAGAACAGCAATTTCTaGAACTGTTATAGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: AWVTSETPSANILRTNNDENSNF*NCYSPF
Trigger: AAAAGGGCTATAACAGTTCAAGAAATTGCTGTTCTC...ATCATTATTCGTCCTCAGAATGTTAGCTGACGGAGTTTCACTAGTCACCCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTCATAGCTTGCTGTACTaGGTCATCAGTTCCTGTTAT +
Preference number: 5 (lower is better)
Translates to: QKCTGSQEANTCVRFLICHSLLY*VISSCY
Trigger: ATAACAGGAACTGATGACCAAGTACAGCAAGCTATG...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCCTTAATGAATTACCCTAAAGATGGCTTCCTGGCACAGCCCTGCTCTTTTTGTATAAATCCAATCTCCTaGAGAGAGTTCATAGCTTGC +
Preference number: 5 (lower is better)
Translates to: SLMNYPKDGFLAQPCSFCINPIS*REFIAC
Trigger: GCAAGCTATGAACTCTCTCAAGGAGATTGGATTTAT...ACAAAAAGAGCAGGGCTGTGCCAGGAAGCCATCTTTAGGGTAATTCATTAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAGCAGCAGTTGGGTCTTaGGTCTTTGCCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: LYTPSQMCQILLLSFENVAAVGS*VFAHSS
Trigger: AGAAGAATGGGCAAAGACCAAAGACCCAACTGCTGC...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTTTCAGAGCCCTGTATTaGCCTTCAGAAGCAAAAACT +
Preference number: 5 (lower is better)
Translates to: QKCTGSQEANTCVRFLICFRALY*PSEAKT
Trigger: AGTTTTTGCTTCTGAAGGCAAATACAGGGCTCTGAA...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAAGCTGCGTCTGGTTCTaGATACTGGTATCCATTTTT +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLSCVWF*ILVSIF
Trigger: AAAAATGGATACCAGTATCAAGAACCAGACGCAGCT...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAGCTGCGTCTGGTTCTaGATACTGGTATCCATTTTT +
Preference number: 5 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSSCVWF*ILVSIF
Trigger: AAAAATGGATACCAGTATCAAGAACCAGACGCAGCT...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTCCAGGAAGCAAACACTaGTGTACGTTTTCTAATCTG +
Preference number: 5 (lower is better)
Translates to: QKCTGSQEANTCVRFLICPGSKH*CTFSNL
Trigger: CAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGG...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS TCA 90 bp TCCTCTGTTTTTGTCTCTAATCCTGGAAACAGAGATTTGATAGCCTaGTGGATGATGGTTCTTTTCTCTTTGGTGTCCTCGATAACCTCA +
Preference number: 5 (lower is better)
Translates to: SSVFVSNPGNRDLIA*WMMVLFSLVSSITS
Trigger: TGAGGTTATCGAGGACACCAAAGAGAAAAGAACCATCATCCATCAGGCTATCAAATCTCTGTTTCCAGGATTAGAGACAAAAACAGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS TCA 90 bp CCAGCTAACATTCTGAGGACGAATAATGATCTTTCGGTAGGCCCCTaGCAAGGAATAATCTCGAATTTTGTGTCTCATGTTGTCAATATC +
Preference number: 5 (lower is better)
Translates to: PANILRTNNDLSVGP*QGIISNFVSHVVNI
Trigger: GATATTGACAACATGAGACACAAAATTCGAGATTATTCCTTGTCAGGGGCCTACCGAAAGATCATTATTCGTCCTCAGAATGTTAGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAAATGTTTTCTTGGATTaGCCAAAGCCTTTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLNVFLD*PKPFSQ
Trigger: CTGGGAAAAAGGCTTTGGCAAATCCAAGAAAACATT...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTGCCAAGAATGTTTTCTaGGATTTGCCAAAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSAKNVF*DLPKPF
Trigger: AAAAGGCTTTGGCAAATCCAAGAAAACATTCTTGGC...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTCGGTAGGCCCCTGACAAGGAATAATCTCGAATTTTGTGTCTCATGTTGTCAAGCCAAGAATGTTTTCTaGGATTTGCCAAAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: FGRPLTRNNLEFCVSCCQAKNVF*DLPKPF
Trigger: AAAAGGCTTTGGCAAATCCAAGAAAACATTCTTGGC...TTGACAACATGAGACACAAAATTCGAGATTATTCCTTGTCAGGGGCCTACCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTGCATCCATGGTGTCTTaGTTTTCCTTATATAGTACG +
Preference number: 5 (lower is better)
Translates to: QKCTGSQEANTCVRFLICASMVS*FSLYST
Trigger: CGTACTATATAAGGAAAACAAAGACACCATGGATGC...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTCGGTAGGCCCCTGACAAGGAATAATCTCGAATTTTGTGTCTCATGTTGTCAAGCATCCATGGTGTCTTaGTTTTCCTTATATAGTACG +
Preference number: 5 (lower is better)
Translates to: FGRPLTRNNLEFCVSCCQASMVS*FSLYST
Trigger: CGTACTATATAAGGAAAACAAAGACACCATGGATGC...TTGACAACATGAGACACAAAATTCGAGATTATTCCTTGTCAGGGGCCTACCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTGAGAACAGCAATTTCTaGAACTGTTATAGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: SHQRSLCNARHGNTKATGENSNF*NCYSPF
Trigger: AAAAGGGCTATAACAGTTCAAGAAATTGCTGTTCTC...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTCTTGAATTTTATGCTTTGGGTAGATAACATCGAAACCAGGCAAGGGCATTACGAGAGAGTTCATAGCTaGCTGTACTTGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: FLNFMLWVDNIETRQGHYERVHS*LYLVIS
Trigger: ACTGATGACCAAGTACAGCAAGCTATGAACTCTCTC...GTAATGCCCTTGCCTGGTTTCGATGTTATCTACCCAAAGCATAAAATTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp CAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTATAAATCCAATCTCCTaGAGAGAGTTCATAGCTTGC +
Preference number: 5 (lower is better)
Translates to: QKCTGSQEANTCVRFLICINPIS*REFIAC
Trigger: GCAAGCTATGAACTCTCTCAAGGAGATTGGATTTAT...ACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTACCTTCCACACACCTTTaGACAGGTAGTTTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LYTPSQMCQILLLSFENVPSTHL*TGSFLR
Trigger: CCTCAGAAAACTACCTGTCAAAAGGTGTGTGGAAGG...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp ACTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTTTCCCTGTAGGCTTCTaGAATTTTATGCTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: TKTKMHREPGSKHLCTFSFPVGF*NFMLWV
Trigger: TACCCAAAGCATAAAATTCAAGAAGCCTACAGGGAA...AGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTATTCCCTGTAGGCTTCTaGAATTTTATGCTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLFPVGF*NFMLWV
Trigger: TACCCAAAGCATAAAATTCAAGAAGCCTACAGGGAA...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTATTGTCAATATCAAGATaGTCAGCTGTGAGCATTTCC +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLLSISR*SAVSIS
Trigger: GGAAATGCTCACAGCTGACAATCTTGATATTGACAA...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTCGGTAGGCCCCTGACAAGGAATAATCTCGAATTTTGTGTCTCATGTTGTCAATTGTCAATATCAAGATaGTCAGCTGTGAGCATTTCC +
Preference number: 5 (lower is better)
Translates to: FGRPLTRNNLEFCVSCCQLSISR*SAVSIS
Trigger: GGAAATGCTCACAGCTGACAATCTTGATATTGACAA...TTGACAACATGAGACACAAAATTCGAGATTATTCCTTGTCAGGGGCCTACCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp CCTTTCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTTGAAAAGTGGAATTTaGGGATCATCATATGCAACG +
Preference number: 5 (lower is better)
Translates to: PFTPEKFMQCQTWKYQSHLKSGI*GSSYAT
Trigger: CGTTGCATATGATGATCCCAAAATTCCACTTTTCAA...GTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCACACCAGAGAAGTTTATGCAATGCCAGACATGGAAATACCAAAGCCACTGGTTTGAAAAGTGGAATTTaGGGATCATCATATGCAACG +
Preference number: 5 (lower is better)
Translates to: SHQRSLCNARHGNTKATGLKSGI*GSSYAT
Trigger: CGTTGCATATGATGATCCCAAAATTCCACTTTTCAA...ACCAGTGGCTTTGGTATTTCCATGTCTGGCATTGCATAAACTTCTCTGGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCGGCTGCAGTGCAAGATaGAGAATTGCAGGATTGCAC +
Preference number: 5 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFGCSAR*RIAGLH
Trigger: GTGCAATCCTGCAATTCTCAATCTTGCACTGCAGCC...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCCAGGTGGGCAAGTCTTaGTGCAGTTATTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: FPLLHTMCWAKCNFLFFFQVGKS*CSYFEN
Trigger: GTTCTCAAAATAACTGCACAAAGACTTGCCCACCTG...GAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCACCTTCCACACACCTTTaGACAGGTAGTTTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSPSTHL*TGSFLR
Trigger: CCTCAGAAAACTACCTGTCAAAAGGTGTGTGGAAGG...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAGTCTTCCCTTCTAGGTaGTCCACATCTGTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LYTPSQMCQILLLSFENVVFPSR*STSVLK
Trigger: TTTCAACACAGATGTGGACAACCTAGAAGGGAAGAC...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp CTAAGACAAAAATGCACAGGGAGCCAGGAAGCAAACACTTGTGTACGTTTTCTAATCCATAGTCCAGATTaGTTTTGTTGCATTTGCTCT +
Preference number: 5 (lower is better)
Translates to: LRQKCTGSQEANTCVRFLIHSPD*FCCICS
Trigger: AGAGCAAATGCAACAAAACAAATCTGGACTATGGAT...TAGAAAACGTACACAAGTGTTTGCTTCCTGGCTCCCTGTGCATTTTTGTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCCCCTATCCTCTGTTTTaGTCTCTAATCCTGGAAACA +
Preference number: 5 (lower is better)
Translates to: FPLLHTMCWAKCNFLFFFPYPLF*SLILET
Trigger: TGTTTCCAGGATTAGAGACAAAAACAGAGGATAGGG...GAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCACAGGTGGGCAAGTCTTaGTGCAGTTATTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSQVGKS*CSYFEN
Trigger: GTTCTCAAAATAACTGCACAAAGACTTGCCCACCTG...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCCAGGTGGGCAAGTCTTaGTGCAGTTATTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFQVGKS*CSYFEN
Trigger: GTTCTCAAAATAACTGCACAAAGACTTGCCCACCTG...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTTCCTTTATTACATACCATGTGTTGGGCTAAGTGCAACTTCCTCTTCTTTTTCCATAGCTTGCTGTACTaGGTCATCAGTTCCTGTTAT +
Preference number: 5 (lower is better)
Translates to: FPLLHTMCWAKCNFLFFFHSLLY*VISSCY
Trigger: ATAACAGGAACTGATGACCAAGTACAGCAAGCTATG...GAAAAAGAAGAGGAAGTTGCACTTAGCCCAACACATGGTATGTAATAAAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAGTCTTCCCTTCTAGGTaGTCCACATCTGTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSVFPSR*STSVLK
Trigger: TTTCAACACAGATGTGGACAACCTAGAAGGGAAGAC...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS CCA 90 bp TTAATAAATCCAATCTCCTTGAGAGAGTTCATAGCTTGCTGTACTTaGTCATCAGTTCCTGTTATATTTCTGAGAACAACAGTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LINPISLREFIACCT*SSVPVIFLRTTVKW
Trigger: CCACTTCACTGTTGTTCTCAGAAATATAACAGGAACTGATGACCAAGTACAGCAAGCTATGAACTCTCTCAAGGAGATTGGATTTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS-3UTR CAA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAATGGTTCTTTTCTCTTaGGTGTCCTCGATAACCTCA +
Preference number: 5 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSMVLFS*VSSITS
Trigger: TGAGGTTATCGAGGACACCAAAGAGAAAAGAACCAT...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAGCATCCATGGTGTCTTaGTTTTCCTTATATAGTACG +
Preference number: 5 (lower is better)
Translates to: LYTPSQMCQILLLSFENVASMVS*FSLYST
Trigger: CGTACTATATAAGGAAAACAAAGACACCATGGATGC...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCACATAGCTTGCTGTACTaGGTCATCAGTTCCTGTTAT +
Preference number: 5 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSHSLLY*VISSCY
Trigger: ATAACAGGAACTGATGACCAAGTACAGCAAGCTATG...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTGTATACTCCATCACAGATGTGTCAAATACTCCTGCTGTCTTTTGAGAATGTAATAAATCCAATCTCCTaGAGAGAGTTCATAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LYTPSQMCQILLLSFENVINPIS*REFIAC
Trigger: GCAAGCTATGAACTCTCTCAAGGAGATTGGATTTAT...TACATTCTCAAAAGACAGCAGGAGTATTTGACACATCTGTGATGGAGTATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTCTTGAATTTTATGCTTTGGGTAGATAACATCGAAACCAGGCAAGGGCATTACTTGAAAAGTGGAATTTaGGGATCATCATATGCAACG +
Preference number: 5 (lower is better)
Translates to: FLNFMLWVDNIETRQGHYLKSGI*GSSYAT
Trigger: CGTTGCATATGATGATCCCAAAATTCCACTTTTCAA...GTAATGCCCTTGCCTGGTTTCGATGTTATCTACCCAAAGCATAAAATTCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481939.5
CDS-3UTR CAA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCATTCAGAGCCCTGTATTaGCCTTCAGAAGCAAAAACT +
Preference number: 5 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSFRALY*PSEAKT
Trigger: AGTTTTTGCTTCTGAAGGCAAATACAGGGCTCTGAA...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TTGTTGCATTTGCTCTTAAAATGCATTGTTGTATACTCCATCACAGATGTGTCAGCCAAGAATGTTTTCTaGGATTTGCCAAAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LLHLLLKCIVVYSITDVSAKNVF*DLPKPF
Trigger: AAAAGGCTTTGGCAAATCCAAGAAAACATTCTTGGC...TGACACATCTGTGATGGAGTATACAACAATGCATTTTAAGAGCAAATGCAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCTTGTCAATATCAAGATaGTCAGCTGTGAGCATTTCC +
Preference number: 5 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFLSISR*SAVSIS
Trigger: GGAAATGCTCACAGCTGACAATCTTGATATTGACAA...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS-3UTR CAA 90 bp TCTTCTCTACCATTATTTATTTTTGAGCAAATACCAGTCCAGTGGAAAGAGTTCGAGAACAGCAATTTCTaGAACTGTTATAGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: SSLPLFIFEQIPVQWKEFENSNF*NCYSPF
Trigger: AAAAGGGCTATAACAGTTCAAGAAATTGCTGTTCTC...GAACTCTTTCCACTGGACTGGTATTTGCTCAAAAATAAATAATGGTAGAGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS TCA 72 bp TCTTTAAGGCCGGAGCCTGGGAGCGCGGGCGCGGCGTaGGCTGGGCGGCGAGGTGGCCAGCGCTCTGGTTGG +
Preference number: 6 (lower is better)
Translates to: SLRPEPGSAGAA*AGRRGGQRSGW
Trigger: CCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCGCCCGCGCTCCCAGGCTCCGGCCTTAAAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356362.6
CDS CAA 90 bp CGCGGGCGCGGCGTGAGCTGGGCGGCGAGGTGGCCAGCGCTCTGGTaGGGACGCAAGAGAGCGGCGAAGGCCACTTGGATGAGCCAGCGG +
Preference number: 6 (lower is better)
Translates to: RGRGVSWAARWPALW*GRKRAAKATWMSQR
Trigger: CCGCTGGCTCATCCAAGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCGCCCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CCA 72 bp CGCGGCGTGAGCTGGGCGGCGAGGTGGCCAGCGCTCTaGTTGGGACGCAAGAGAGCGGCGAAGGCCACTTGG +
Preference number: 6 (lower is better)
Translates to: RGVSWAARWPAL*LGRKRAAKATW
Trigger: CCAAGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CAA 72 bp GGCGTGAGCTGGGCGGCGAGGTGGCCAGCGCTCTGGTaGGGACGCAAGAGAGCGGCGAAGGCCACTTGGATG +
Preference number: 6 (lower is better)
Translates to: GVSWAARWPALW*GRKRAAKATWM
Trigger: CATCCAAGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCACCTCGCCGCCCAGCTCACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CAA 90 bp GTGGCCAGCGCTCTGGTTGGGACGCAAGAGAGCGGCGAAGGCCACTaGGATGAGCCAGCGGCTAGGGCGGCCAGGCAAAAGCAGCGCTTT +
Preference number: 6 (lower is better)
Translates to: VASALVGTQESGEGH*DEPAARAARQKQRF
Trigger: AAAGCGCTGCTTTTGCCTGGCCGCCCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGCGCTGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CCA 72 bp CTCTGGTTGGGACGCAAGAGAGCGGCGAAGGCCACTTaGATGAGCCAGCGGCTAGGGCGGCCAGGCAAAAGC +
Preference number: 6 (lower is better)
Translates to: LWLGRKRAAKAT*MSQRLGRPGKS
Trigger: GCTTTTGCCTGGCCGCCCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CAA 72 bp GCTCTGGTTGGGACGCAAGAGAGCGGCGAAGGCCACTaGGATGAGCCAGCGGCTAGGGCGGCCAGGCAAAAG +
Preference number: 6 (lower is better)
Translates to: ALVGTQESGEGH*DEPAARAARQK
Trigger: CTTTTGCCTGGCCGCCCTAGCCGCTGGCTCATCCAAGTGGCCTTCGCCGCTCTCTTGCGTCCCAACCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS GCA 72 bp AACTGGGACTCCACTGTCATTATCTTCGACAACCAGTaGCCCACGTTTCAGCGACACACCAGTCATTTCTGT +
Preference number: 6 (lower is better)
Translates to: NWDSTVIIFDNQ*PTFQRHTSHFC
Trigger: ACAGAAATGACTGGTGTGTCGCTGAAACGTGGGGCACTGGTTGTCGAAGATAATGACAGTGGAGTCCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CAA 90 bp GGTACTGCTCAGCGAAGCCAGGTTGTATTCAGCTGCGTCTGGTTCTaGATACTGGTATCCATTTTTAGCACTTCTCGAATGGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: GTAQRSQVVFSCVWF*ILVSIFSTSRMAMV
Trigger: CACCATGGCCATTCGAGAAGTGCTAAAAATGGATACCAGTATCAAGAACCAGACGCAGCTGAATACAACCTGGCTTCGCTGAGCAGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS GCA 72 bp CACTTGTGTACGTTTTCTAATCTGTGGACAAGGTACTaGTCAGCGAAGCCAGGTTGTATTCAGCTGCGTCTG +
Preference number: 6 (lower is better)
Translates to: HLCTFSNLWTRY*SAKPGCIQLRL
Trigger: CAGACGCAGCTGAATACAACCTGGCTTCGCTGAGCAGTACCTTGTCCACAGATTAGAAAACGTACACAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS CAA 90 bp CCATATTTTGAAAGTCCTCGAAGCAGCTGCCCTTCCACACACCTTTaGACAGGTAGTTTTCTGAGGGCAGCAGTTGGGTCTTTGGTCTTT +
Preference number: 6 (lower is better)
Translates to: PYFESPRSSCPSTHL*TGSFLRAAVGSLVF
Trigger: AAAGACCAAAGACCCAACTGCTGCCCTCAGAAAACTACCTGTCAAAAGGTGTGTGGAAGGGCAGCTGCTTCGAGGACTTTCAAAATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000478208.1
CDS GCA 72 bp CAAGGTACTGCTCAGCGAAGCCAGGTTGTATTCAGCTaGGTCTGGTTCTTGATACTGGTATCCATTTTTAGC +
Preference number: 6 (lower is better)
Translates to: QGTAQRSQVVFS*VWFLILVSIFS
Trigger: GCTAAAAATGGATACCAGTATCAAGAACCAGACGCAGCTGAATACAACCTGGCTTCGCTGAGCAGTACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS CAA 90 bp TTGGTGTCCTCGATAACCTCAATGGCAACACTGGTTTCCTTATTTTaGAACAGCTGGAGCTCTTCCAATCGCTGCTTTTCTTCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: LVSSITSMATLVSLF*NSWSSSNRCFSSAV
Trigger: GACAGCTGAAGAAAAGCAGCGATTGGAAGAGCTCCAGCTGTTCAAAAATAAGGAAACCAGTGTTGCCATTGAGGTTATCGAGGACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS TCA 72 bp AGCGAAGCCAGGTTGTATTCAGCTGCGTCTGGTTCTTaGTACTGGTATCCATTTTTAGCACTTCTCGAATGG +
Preference number: 6 (lower is better)
Translates to: SEARLYSAASGS*YWYPFLALLEW
Trigger: CCATTCGAGAAGTGCTAAAAATGGATACCAGTATCAAGAACCAGACGCAGCTGAATACAACCTGGCTTCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS CCA 72 bp CCAGGAAGCAAACACTTGTGTACGTTTTCTAATCTGTaGACAAGGTACTGCTCAGCGAAGCCAGGTTGTATT +
Preference number: 6 (lower is better)
Translates to: PGSKHLCTFSNL*TRYCSAKPGCI
Trigger: AATACAACCTGGCTTCGCTGAGCAGTACCTTGTCCACAGATTAGAAAACGTACACAAGTGTTTGCTTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS CAA 72 bp TTGACAGGTAGTTTTCTGAGGGCAGCAGTTGGGTCTTaGGTCTTTGCCCATTCTTCTCTGCATTTAACCAAG +
Preference number: 6 (lower is better)
Translates to: LTGSFLRAAVGS*VFAHSSLHLTK
Trigger: CTTGGTTAAATGCAGAGAAGAATGGGCAAAGACCAAAGACCCAACTGCTGCCCTCAGAAAACTACCTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000478208.1
ENST00000481939.5
CDS CAA 72 bp CAGCGAAGCCAGGTTGTATTCAGCTGCGTCTGGTTCTaGATACTGGTATCCATTTTTAGCACTTCTCGAATG +
Preference number: 6 (lower is better)
Translates to: QRSQVVFSCVWF*ILVSIFSTSRM
Trigger: CATTCGAGAAGTGCTAAAAATGGATACCAGTATCAAGAACCAGACGCAGCTGAATACAACCTGGCTTCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS TCA 72 bp CCTCATCCACTGGAATGGACAAGTCATTCAAATGGCTaGTCCGTCCATCTTTTCCTATTTCATGAACAACGA +
Preference number: 6 (lower is better)
Translates to: PHPLEWTSHSNG*SVHLFLFHEQR
Trigger: TCGTTGTTCATGAAATAGGAAAAGATGGACGGATCAGCCATTTGAATGACTTGTCCATTCCAGTGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
ENST00000482157.1
CDS CAA 72 bp TCTAGGTTGTCCACATCTGTGTTGAAAAGTGGAATTTaGGGATCATCATATGCAACGACTTCCCAGCTAACA +
Preference number: 6 (lower is better)
Translates to: SRLSTSVLKSGI*GSSYATTSQLT
Trigger: TGTTAGCTGGGAAGTCGTTGCATATGATGATCCCAAAATTCCACTTTTCAACACAGATGTGGACAACCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356362.6
ENST00000469408.6
CDS CAA 90 bp AGCTCTTCCAACCTGATACGTAGGGACAGCTGTGGTTCCAAATCTTaGCATTCCATAGTAGTTAATAAATCCAATCTCCTTGAGAGAGTT +
Preference number: 6 (lower is better)
Translates to: SSSNLIRRDSCGSKS*HSIVVNKSNLLERV
Trigger: AACTCTCTCAAGGAGATTGGATTTATTAACTACTATGGAATGCAAAGATTTGGAACCACAGCTGTCCCTACGTATCAGGTTGGAAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CCA 72 bp TTCCCTAGCTTAAAGTTCATCAAGCACTTATTCAGGTaGGCAAGTCTTTGTGCAGTTATTTTGAGAACAGCA +
Preference number: 6 (lower is better)
Translates to: FPSLKFIKHLFR*ASLCAVILRTA
Trigger: TGCTGTTCTCAAAATAACTGCACAAAGACTTGCCCACCTGAATAAGTGCTTGATGAACTTTAAGCTAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CCA 72 bp CCAATCTCCTTGAGAGAGTTCATAGCTTGCTGTACTTaGTCATCAGTTCCTGTTATATTTCTGAGAACAACA +
Preference number: 6 (lower is better)
Translates to: PISLREFIACCT*SSVPVIFLRTT
Trigger: TGTTGTTCTCAGAAATATAACAGGAACTGATGACCAAGTACAGCAAGCTATGAACTCTCTCAAGGAGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CAA 72 bp TCCAATCTCCTTGAGAGAGTTCATAGCTTGCTGTACTaGGTCATCAGTTCCTGTTATATTTCTGAGAACAAC +
Preference number: 6 (lower is better)
Translates to: SNLLERVHSLLY*VISSCYISENN
Trigger: GTTGTTCTCAGAAATATAACAGGAACTGATGACCAAGTACAGCAAGCTATGAACTCTCTCAAGGAGATTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CAA 72 bp AACCTGATACGTAGGGACAGCTGTGGTTCCAAATCTTaGCATTCCATAGTAGTTAATAAATCCAATCTCCTT +
Preference number: 6 (lower is better)
Translates to: NLIRRDSCGSKS*HSIVVNKSNLL
Trigger: AAGGAGATTGGATTTATTAACTACTATGGAATGCAAAGATTTGGAACCACAGCTGTCCCTACGTATCAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CAA 90 bp GTTAATAAATCCAATCTCCTTGAGAGAGTTCATAGCTTGCTGTACTaGGTCATCAGTTCCTGTTATATTTCTGAGAACAACAGTGAAGTG +
Preference number: 6 (lower is better)
Translates to: VNKSNLLERVHSLLY*VISSCYISENNSEV
Trigger: CACTTCACTGTTGTTCTCAGAAATATAACAGGAACTGATGACCAAGTACAGCAAGCTATGAACTCTCTCAAGGAGATTGGATTTATTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS CAA 90 bp TCCATAGTAGTTAATAAATCCAATCTCCTTGAGAGAGTTCATAGCTaGCTGTACTTGGTCATCAGTTCCTGTTATATTTCTGAGAACAAC +
Preference number: 6 (lower is better)
Translates to: SIVVNKSNLLERVHS*LYLVISSCYISENN
Trigger: GTTGTTCTCAGAAATATAACAGGAACTGATGACCAAGTACAGCAAGCTATGAACTCTCTCAAGGAGATTGGATTTATTAACTACTATGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
CDS TCA 72 bp TTCAAATGGCTGATCCGTCCATCTTTTCCTATTTCATaGACAACGAAGTCGGAGTATCTTTCTTTTAAGATT +
Preference number: 6 (lower is better)
Translates to: FKWLIRPSFPIS*TTKSEYLSFKI
Trigger: AATCTTAAAAGAAAGATACTCCGACTTCGTTGTTCATGAAATAGGAAAAGATGGACGGATCAGCCATTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5
ENST00000482157.1
CDS CAA 72 bp GTTAATAAATCCAATCTCCTTGAGAGAGTTCATAGCTaGCTGTACTTGGTCATCAGTTCCTGTTATATTTCT +
Preference number: 6 (lower is better)
Translates to: VNKSNLLERVHS*LYLVISSCYIS
Trigger: AGAAATATAACAGGAACTGATGACCAAGTACAGCAAGCTATGAACTCTCTCAAGGAGATTGGATTTATTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356362.6
ENST00000469408.6
ENST00000481939.5