Pregenerated sensors for PUS3 (Homo sapiens)
Ensembl gene IDs: ENSG00000110060Ensembl transcript IDs: ENST00000227474.8, ENST00000530811.5, ENST00000534158.5, ENST00000613398.4
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCCTAGCACTGAAGCTTaGTTCTACAGGGGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMPSTEA*FYRGPG Trigger: GCCTGGGCCCCTGTAGAACCAAGCTTCAGTGCTAGG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCTGCCCCTTGGAAACTaGGAGCGAAGGTCAAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMLPLGN*ERRSSE Trigger: CTCACTTGACCTTCGCTCTCAGTTTCCAAGGGGCAG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGAGAGCGAAGGTCAAGTaGGATCACTTTCCGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMRAKVK*DHFPAA Trigger: GGCTGCCGGAAAGTGATCTCACTTGACCTTCGCTCT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGGGAATCCCTGCCCCTTaGAAACTGAGAGCGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMGIPAP*KLRAKV Trigger: GACCTTCGCTCTCAGTTTCCAAGGGGCAGGGATTCC...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR GCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGAACTGGAAAGGTTCTTaGCATCTCCCCTCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMNWKGS*HLPSPG Trigger: CCCAGGTGAGGGGAGATGGCAAGAACCTTTCCAGTT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCGGGATTCCAGTCCTTaGCATTTAGGACGGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMRDSSP*HLGRSM Trigger: CATGGACCGTCCTAAATGCCAAGGACTGGAATCCCG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGGAGGGAGTACCCGATTaGGAATGTGGGTATAACGGA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMEGVPD*ECGYNG Trigger: TCCGTTATACCCACATTCTCAATCGGGTACTCCCTC...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR GCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCCCCTACGTACAAAATaGTGGATCCGGGATTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMPLRTK*WIRDSS Trigger: ACTGGAATCCCGGATCCAGCATTTTGTACGTAGGGG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGACGTGTCTTCGGCCATaGGCACTGAAATCAAATGCA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMTCLRP*ALKSNA Trigger: TGCATTTGATTTCAGTGCTCATGGCCGAAGACACGT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCCCACTAGCTGTACTTaGGCAGATAGAATAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMPTSCT*ADRIVL Trigger: GAGGACTATTCTATCTGCTCAAGTACAGCTAGTGGG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCAATATACGGATGTCTaGAGGGAGTACCCGATTGAG | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMQYTDV*REYPIE Trigger: CTCAATCGGGTACTCCCTCCAGACATCCGTATATTG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTATTCCACAGGGTACTaGAACAGTGTCCAGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMYSTGY*NSVQSL Trigger: CAAGGACTGGACACTGTTCCAGTACCCTGTGGAATA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCTACGTACAAAATGCTaGATCCGGGATTCCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMLRTKC*IRDSSP Trigger: AGGACTGGAATCCCGGATCCAGCATTTTGTACGTAG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCCACCTACCATTAGGTaGTTCCTAGATCCTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMPPTIR*FLDPGK Trigger: TTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR GCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGAGTCTTTGCACCTCTTaGTCCAGTTCTCGTACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMSLCTS*SSSRTL Trigger: AAGAGTACGAGAACTGGAGCAAGAGGTGCAAAGACT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR GCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGACAAAGGCACTGGTCTaGTTTATGACAGAGGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMTKALV*FMTEGL Trigger: TAAGCCCTCTGTCATAAAGCAGACCAGTGCCTTTGT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR GCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTGGAATAAATGTGGGTaGTCAATTCGTCCCCTACGT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMWNKCG*SIRPLR Trigger: ACGTAGGGGACGAATTGAGCACCCACATTTATTCCA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGGGCTTCTCCATTCCTTaGCCAATCAGAAAGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMGFSIP*PIRKRI Trigger: TATCCTCTTTCTGATTGGCCAAGGAATGGAGAAGCC...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCTCATCAATAATCTCTaGCTTCTCCATTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMLINNL*LLHSLA Trigger: GGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCATTCCATCCATCTTTaGTCCTATTCCACAGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMHSIHL*SYSTGY Trigger: GTACCCTGTGGAATAGGACCAAAGATGGATGGAATG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCCAGTCACTTCAAACTaGCATAACTGGAAAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMPVTSN*HNWKGS Trigger: AGAACCTTTCCAGTTATGTCAGTTTGAAGTGACTGG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR GCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGAGTTGGATGTCTGTCTaGTTTCTACTAGTCGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMSWMSV*FLLVES Trigger: AGACTCGACTAGTAGAAAGCAGACAGACATCCAACT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGAGGAGCTTCTCAGTCTaGTTTCTGTCTGTGTCATTA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMRSFSV*FLSVSL Trigger: TAATGACACAGACAGAAACCAGACTGAGAAGCTCCT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCACATCGGTGATAGTTaGATGTCTGTCTGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMHIGDS*MSVCFL Trigger: TAGAAAGCAGACAGACATCCAACTATCACCGATGTG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTGTCATTATAAGCCATaGTATGACAACCCCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMCHYKP*YDNPRN Trigger: ATTCCTGGGGTTGTCATATCATGGCTTATAATGACA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR GCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTCCTTTTTAAGTCTTTaGACCTCTTGCTCCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMSFLSL*TSCSSS Trigger: AGAACTGGAGCAAGAGGTGCAAAGACTTAAAAAGGA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR GCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTTGATGATAAAGGAATaGCTGGCCAGTCACTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMLMIKE*LASHFK Trigger: TTTGAAGTGACTGGCCAGGCATTCCTTTATCATCAA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCTACTAGTCGAGTCTTaGTTAGAGCTTCAAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMLLVES*LELQTV Trigger: AACTGTTTGAAGCTCTAACCAAGACTCGACTAGTAG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGGATAGAATAGTCCTCTaGAAATTAATCACACCGTTG | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMDRIVL*KLITPL Trigger: CAACGGTGTGATTAATTTTCAGAGGACTATTCTATC...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR TCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGGGTCATAGATCCACTTaGCATTTTCAAACTTACAGT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMGHRST*HFQTYS Trigger: ACTGTAAGTTTGAAAATGTCAAGTGGATCTATGACC...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTTTGTTTCTTCCTCATaGAATAAATGTGGGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMFVSSS*NKCGCS Trigger: TGAGCACCCACATTTATTCCATGAGGAAGAAACAAA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CCA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCATTACAGTCCCTTTTaGCTTTTGTTTCTTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMHYSPF*LLFLPH Trigger: ATGAGGAAGAAACAAAAGCCAAAAGGGACTGTAATG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CCA 90 bp | ATAGCGGTAAGTCCGCTCAAGGCAGCTGAACCTAGCACTGAAGCTTaGTTCTACAGGGGCCCAGGCCAATATACGGATGTCTGGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: IAVSPLKAAEPSTEA*FYRGPGQYTDVWRE Trigger: CTCCCTCCAGACATCCGTATATTGGCCTGGGCCCCTGTAGAACCAAGCTTCAGTGCTAGGTTCAGCTGCCTTGAGCGGACTTACCGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS TCA 90 bp | TCCTCTTTTACATTAAAGTCCTCGGAATCCCTGCCCCTTGGAAACTaGGAGCGAAGGTCAAGTGAGATCACTTTCCGGCAGCCGGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SSFTLKSSESLPLGN*ERRSSEITFRQPAA Trigger: CGCGGCCGGCTGCCGGAAAGTGATCTCACTTGACCTTCGCTCTCAGTTTCCAAGGGGCAGGGATTCCGAGGACTTTAATGTAAAAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000613398.4 |
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| CDS CCA 90 bp | ACTGAAGCTTGGTTCTACAGGGGCCCAGGCCAATATACGGATGTCTaGAGGGAGTACCCGATTGAGAATGTGGGTATAACGGATCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TEAWFYRGPGQYTDV*REYPIENVGITDLF Trigger: GAAGAGATCCGTTATACCCACATTCTCAATCGGGTACTCCCTCCAGACATCCGTATATTGGCCTGGGCCCCTGTAGAACCAAGCTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CCA 90 bp | TGGAATAAATGTGGGTGCTCAATTCGTCCCCTACGTACAAAATGCTaGATCCGGGATTCCAGTCCTTGGCATTTAGGACGGTCCATGAGG | + |
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Preference number: 5 (lower is better) Translates to: WNKCGCSIRPLRTKC*IRDSSPWHLGRSMR Trigger: CCTCATGGACCGTCCTAAATGCCAAGGACTGGAATCCCGGATCCAGCATTTTGTACGTAGGGGACGAATTGAGCACCCACATTTATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCGGAATCCCTGCCCCTaGGAAACTGAGAGCGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMRNPCP*ETESEG Trigger: ACCTTCGCTCTCAGTTTCCAAGGGGCAGGGATTCCG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS GCA 90 bp | TCATGGAATAAATGTGGGTGCTCAATTCGTCCCCTACGTACAAAATaGTGGATCCGGGATTCCAGTCCTTGGCATTTAGGACGGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: SWNKCGCSIRPLRTK*WIRDSSPWHLGRSM Trigger: CATGGACCGTCCTAAATGCCAAGGACTGGAATCCCGGATCCAGCATTTTGTACGTAGGGGACGAATTGAGCACCCACATTTATTCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCCGGGATTCCAGTCCTaGGCATTTAGGACGGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMPGFQS*AFRTVH Trigger: ATGGACCGTCCTAAATGCCAAGGACTGGAATCCCGG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS TCA 90 bp | TCCTCTTTTACATTAAAGTCCTCGGAATCCCTGCCCCTTGGAAACTaGGAGCGAAGGTCAAGTGAGATCACCTGTCCAAAGGCACTAACT | + |
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Preference number: 5 (lower is better) Translates to: SSFTLKSSESLPLGN*ERRSSEITCPKALT Trigger: AGTTAGTGCCTTTGGACAGGTGATCTCACTTGACCTTCGCTCTCAGTTTCCAAGGGGCAGGGATTCCGAGGACTTTAATGTAAAAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000534158.5 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGAAGTCTTTGCACCTCTaGCTCCAGTTCTCGTACTCT | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMKSLHL*LQFSYS Trigger: AGAGTACGAGAACTGGAGCAAGAGGTGCAAAGACTT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTGGCTTCTCCATTCCTaGGCCAATCAGAAAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMWLLHS*ANQKED Trigger: ATCCTCTTTCTGATTGGCCAAGGAATGGAGAAGCCA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTCATTCCATCCATCTTaGGTCCTATTCCACAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMSFHPS*VLFHRV Trigger: TACCCTGTGGAATAGGACCAAAGATGGATGGAATGA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTTCCTTTTTAAGTCTTaGCACCTCTTGCTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMFLFKS*HLLLQF Trigger: GAACTGGAGCAAGAGGTGCAAAGACTTAAAAAGGAA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTCTACTAGTCGAGTCTaGGTTAGAGCTTCAAACAGT | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMSTSRV*VRASNS Trigger: ACTGTTTGAAGCTCTAACCAAGACTCGACTAGTAGA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227474.8 ENST00000530811.5 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGCATCATACATCGGACTaGATGATAAAGGAATGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMHHTSD*MIKECL Trigger: CAGGCATTCCTTTATCATCAAGTCCGATGTATGATG...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGAAATTAATCACACCGTaGGCTACATCCATTTTACAC | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMKLITP*ATSILH Trigger: GTGTAAAATGGATGTAGCCAACGGTGTGATTAATTT...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS-3UTR CAA 90 bp | CTTTTCTGTCCACCTACCATTAGGTGGTTCCTAGATCCTGGCAAATTGTCTATGTACAGCCATACTATATaGAGGCTTTTGGGGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: LFCPPTIRWFLDPGKLSMYSHTI*RLLGIF Trigger: AAAAATCCCCAAAAGCCTCAATATAGTATGGCTGTA...CATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAGAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CCA 90 bp | ATCGGTGATAGTTGGATGTCTGTCTGCTTTCTACTAGTCGAGTCTTaGTTAGAGCTTCAAACAGTTTCTCTTCAATGGTATTATTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: IGDSWMSVCFLLVES*LELQTVSLQWYYLC Trigger: ACACAAATAATACCATTGAAGAGAAACTGTTTGAAGCTCTAACCAAGACTCGACTAGTAGAAAGCAGACAGACATCCAACTATCACCGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000534158.5 |
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| CDS CCA 72 bp | AGTCCGCTCAAGGCAGCTGAACCTAGCACTGAAGCTTaGTTCTACAGGGGCCCAGGCCAATATACGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: SPLKAAEPSTEA*FYRGPGQYTDV Trigger: GACATCCGTATATTGGCCTGGGCCCCTGTAGAACCAAGCTTCAGTGCTAGGTTCAGCTGCCTTGAGCGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CCA 72 bp | TGGTTCTACAGGGGCCCAGGCCAATATACGGATGTCTaGAGGGAGTACCCGATTGAGAATGTGGGTATAACG | + |
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Preference number: 6 (lower is better) Translates to: WFYRGPGQYTDV*REYPIENVGIT Trigger: CGTTATACCCACATTCTCAATCGGGTACTCCCTCCAGACATCCGTATATTGGCCTGGGCCCCTGTAGAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CCA 72 bp | TGTGGGTGCTCAATTCGTCCCCTACGTACAAAATGCTaGATCCGGGATTCCAGTCCTTGGCATTTAGGACGG | + |
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Preference number: 6 (lower is better) Translates to: CGCSIRPLRTKC*IRDSSPWHLGR Trigger: CCGTCCTAAATGCCAAGGACTGGAATCCCGGATCCAGCATTTTGTACGTAGGGGACGAATTGAGCACCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS TCA 72 bp | ACATTAAAGTCCTCGGAATCCCTGCCCCTTGGAAACTaGGAGCGAAGGTCAAGTGAGATCACCTGTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: TLKSSESLPLGN*ERRSSEITCPK Trigger: CTTTGGACAGGTGATCTCACTTGACCTTCGCTCTCAGTTTCCAAGGGGCAGGGATTCCGAGGACTTTAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000534158.5 |
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| CDS TCA 72 bp | AGGCCAATATACGGATGTCTGGAGGGAGTACCCGATTaGGAATGTGGGTATAACGGATCTCTTCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RPIYGCLEGVPD*ECGYNGSLQQQ Trigger: CTGCTGCTGAAGAGATCCGTTATACCCACATTCTCAATCGGGTACTCCCTCCAGACATCCGTATATTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CCA 72 bp | CTACGTACAAAATGCTGGATCCGGGATTCCAGTCCTTaGCATTTAGGACGGTCCATGAGGGGCTTATATGTG | + |
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Preference number: 6 (lower is better) Translates to: LRTKCWIRDSSP*HLGRSMRGLYV Trigger: CACATATAAGCCCCTCATGGACCGTCCTAAATGCCAAGGACTGGAATCCCGGATCCAGCATTTTGTACGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CAA 72 bp | CCTACGTACAAAATGCTGGATCCGGGATTCCAGTCCTaGGCATTTAGGACGGTCCATGAGGGGCTTATATGT | + |
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Preference number: 6 (lower is better) Translates to: PTYKMLDPGFQS*AFRTVHEGLIC Trigger: ACATATAAGCCCCTCATGGACCGTCCTAAATGCCAAGGACTGGAATCCCGGATCCAGCATTTTGTACGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS GCA 72 bp | AAATGTGGGTGCTCAATTCGTCCCCTACGTACAAAATaGTGGATCCGGGATTCCAGTCCTTGGCATTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: KCGCSIRPLRTK*WIRDSSPWHLG Trigger: TCCTAAATGCCAAGGACTGGAATCCCGGATCCAGCATTTTGTACGTAGGGGACGAATTGAGCACCCACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS GCA 72 bp | GTGCGCATCTTCACTCCTTCTACAAAGGCACTGGTCTaGTTTATGACAGAGGGCTTAACATTTCCCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: VRIFTPSTKALV*FMTEGLTFPHS Trigger: AGAATGGGGAAATGTTAAGCCCTCTGTCATAAAGCAGACCAGTGCCTTTGTAGAAGGAGTGAAGATGCGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CCA 72 bp | AGCAGCTCATCAATAATCTCTGGCTTCTCCATTCCTTaGCCAATCAGAAAGAGGATAGCCATCATACATCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSSIISGFSIP*PIRKRIAIIHR Trigger: CCGATGTATGATGGCTATCCTCTTTCTGATTGGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CAA 72 bp | CAGCAGCTCATCAATAATCTCTGGCTTCTCCATTCCTaGGCCAATCAGAAAGAGGATAGCCATCATACATCG | + |
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Preference number: 6 (lower is better) Translates to: QQLINNLWLLHS*ANQKEDSHHTS Trigger: CGATGTATGATGGCTATCCTCTTTCTGATTGGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAGCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CAA 72 bp | GCCAATCAGAAAGAGGATAGCCATCATACATCGGACTaGATGATAAAGGAATGCCTGGCCAGTCACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: ANQKEDSHHTSD*MIKECLASHFK Trigger: TTTGAAGTGACTGGCCAGGCATTCCTTTATCATCAAGTCCGATGTATGATGGCTATCCTCTTTCTGATTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CAA 90 bp | CTCTATATTCAGCAGCTCATCAATAATCTCTGGCTTCTCCATTCCTaGGCCAATCAGAAAGAGGATAGCCATCATACATCGGACTTGATG | + |
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Preference number: 6 (lower is better) Translates to: LYIQQLINNLWLLHS*ANQKEDSHHTSDLM Trigger: CATCAAGTCCGATGTATGATGGCTATCCTCTTTCTGATTGGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAGCTGCTGAATATAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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| CDS CCA 72 bp | AGTTGGATGTCTGTCTGCTTTCTACTAGTCGAGTCTTaGTTAGAGCTTCAAACAGTTTCTCTTCAATGGTAT | + |
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Preference number: 6 (lower is better) Translates to: SWMSVCFLLVES*LELQTVSLQWY Trigger: ATACCATTGAAGAGAAACTGTTTGAAGCTCTAACCAAGACTCGACTAGTAGAAAGCAGACAGACATCCAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000534158.5 |
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| CDS CCA 72 bp | ATTTTTCTCTATATTCAGCAGCTCATCAATAATCTCTaGCTTCTCCATTCCTTGGCCAATCAGAAAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: IFLYIQQLINNL*LLHSLANQKED Trigger: ATCCTCTTTCTGATTGGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAGCTGCTGAATATAGAGAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000227474.8 ENST00000530811.5 ENST00000613398.4 |
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