RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PUS10 (Homo sapiens)

Ensembl gene IDs: ENSG00000162927

Ensembl transcript IDs: ENST00000316752.11, ENST00000398658.2, ENST00000407787.5, ENST00000421319.5, ENST00000430495.5, ENST00000602599.1

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATaGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAA +
Preference number: 1 (lower is better)
Translates to: TPLWWVNSHFTACAP*MSTSCQENHTLCLQ
Trigger: TTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
3UTR CCA 90 bp AAACACATGGTTTCAACGTGGTATGAAACTATGTTGGTTCCAACGTaGCTGACTCCTTTGTGTCCATTAAAACCATTTTCCTCATATCTA +
Preference number: 1 (lower is better)
Translates to: KHMVSTWYETMLVPT*LTPLCPLKPFSSYL
Trigger: TAGATATGAGGAAAATGGTTTTAATGGACACAAAGGAGTCAGCCACGTTGGAACCAACATAGTTTCATACCACGTTGAAACCATGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
3UTR-3UTR TCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGACTGGTCTTGAACCCCTaGCCTCGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: WDHRHLPWRPANICIFSRLVLNP*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGGGTTCAAGACCAG...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398658.2
3UTR-3UTR TCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGATCCCTTAAAGTCCTGTaGGGTGGGTATTATCATCAT +
Preference number: 2 (lower is better)
Translates to: WDHRHLPWRPANICIFSRSLKVL*GGYYHH
Trigger: ATGATGATAATACCCACCTCACAGGACTTTAAGGGA...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
3UTR-3UTR CCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAACTGAAGCTGGAAAGTaGTGGAACTGGGATTCAAAT +
Preference number: 2 (lower is better)
Translates to: WDHRHLPWRPANICIFSRTEAGK*WNWDSN
Trigger: ATTTGAATCCCAGTTCCACCACTTTCCAGCTTCAGT...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
3UTR-3UTR TCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGACCAAATCCTAGGTTTTaGATTCAGTCAGACTGTTCA +
Preference number: 2 (lower is better)
Translates to: WDHRHLPWRPANICIFSRPNPRF*IQSDCS
Trigger: TGAACAGTCTGACTGAATTCAAAACCTAGGATTTGG...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398658.2
3UTR-3UTR GCA 90 bp GGAAGCAGTGCTTCCAACATGACTAACAGAGATCCTTCCCTCTCCATTTTGACTCTATCTTCCAGTTCTTaGAGTCGAATTTTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: GSSASNMTNRDPSLSILTLSSSS*SRIFLG
Trigger: TCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAG...AGTCAAAATGGAGAGGGAAGGATCTCTGTTAGTCATGTTGGAAGCACTGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430495.5
3UTR-3UTR TCA 90 bp TTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTCTCCCTTAAAGTCCTGTaGGGTGGGTATTATCATCAT +
Preference number: 2 (lower is better)
Translates to: LSILSSSSCSRIFLGGGFSLKVL*GGYYHH
Trigger: ATGATGATAATACCCACCTCACAGGACTTTAAGGGA...GAACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
3UTR-3UTR CCA 90 bp TTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTCACTGAAGCTGGAAAGTaGTGGAACTGGGATTCAAAT +
Preference number: 2 (lower is better)
Translates to: LSILSSSSCSRIFLGGGFTEAGK*WNWDSN
Trigger: ATTTGAATCCCAGTTCCACCACTTTCCAGCTTCAGT...GAACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
3UTR-3UTR TCA 90 bp GTTTCCAGAAATTTCTGTAGTTCATTGAGCAACTCTTTATTAGGTATTGTCCCTCCAAATCCTAGGTTTTaGATTCAGTCAGACTGTTCA +
Preference number: 2 (lower is better)
Translates to: VSRNFCSSLSNSLLGIVPPNPRF*IQSDCS
Trigger: TGAACAGTCTGACTGAATTCAAAACCTAGGATTTGG...AGGGACAATACCTAATAAAGAGTTGCTCAATGAACTACAGAAATTTCTGGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
3UTR-3UTR CAA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGACAGGGTTTCATCATCTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: WDHRHLPWRPANICIFSRQGFII*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGATGATGAAACCCTG...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
3UTR CCA 72 bp TGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATaGATGTCCACATCATGCCAGGAAAACCATACTCTT +
Preference number: 3 (lower is better)
Translates to: WWVNSHFTACAP*MSTSCQENHTL
Trigger: AAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
3UTR CCA 72 bp ATCAACATGATCCAAATAGTTTTCAAGACACCGTTATaGTGGGTAAACAGCCATTTTACGGCATGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: INMIQIVFKTPL*WVNSHFTACAP
Trigger: TGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAAACTATTTGGATCATGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
3UTR CCA 72 bp GTTTCAACGTGGTATGAAACTATGTTGGTTCCAACGTaGCTGACTCCTTTGTGTCCATTAAAACCATTTTCC +
Preference number: 3 (lower is better)
Translates to: VSTWYETMLVPT*LTPLCPLKPFS
Trigger: GGAAAATGGTTTTAATGGACACAAAGGAGTCAGCCACGTTGGAACCAACATAGTTTCATACCACGTTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
3UTR-3UTR CAA 90 bp ACTTCATTGGTAATAGCTTGTTTGAGGCTTCCTGGGGAAAATAATGATGTCAGATTGTGGAGGGAAATCTaGCTGAAATTACAGCTTCTT +
Preference number: 3 (lower is better)
Translates to: TSLVIACLRLPGENNDVRLWREI*LKLQLL
Trigger: AAGAAGCTGTAATTTCAGCAAGATTTCCCTCCACAA...TCTGACATCATTATTTTCCCCAGGAAGCCTCAAACAAGCTATTACCAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp GGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTGCCAGGGGCCTTCGGTaGAGGACGCGCAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GMCSMDVHIMPGKPYSLSARGLR*RTRKGV
Trigger: AACACCTTTGCGCGTCCTTCACCGAAGGCCCCTGGC...AGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACTGGAGGCGGAAGTGGTaGTCATCCACGTACTGTGTC +
Preference number: 4 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHWRRKW*SSTYCV
Trigger: GACACAGTACGTGGATGAGCACCACTTCCGCCTCCA...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACTGTGTCTCCATGAAGTaGATGACGCGAGCTCGCACA +
Preference number: 4 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHCVSMK*MTRART
Trigger: TGTGCGAGCTCGCGTCATTCACTTCATGGAGACACA...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATTGGAGGCGGAAGTGGTaGTCATCCACGTACTGTGTC +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDWRRKW*SSTYCV
Trigger: GACACAGTACGTGGATGAGCACCACTTCCGCCTCCA...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp CGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCGCTCCTACCATGGCATaGCTTGGCTCCTACGGTTTT +
Preference number: 4 (lower is better)
Translates to: RHVLHGCPHHARKTILFVAPTMA*LGSYGF
Trigger: AAAACCGTAGGAGCCAAGGCATGCCATGGTAGGAGC...GACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp GCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATATTTTTCGGGAGCTCCTaGGCGTCTCTCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: AILRHVLHGCPHHARKTIFFGSS*ASLWVS
Trigger: AGAGACCCAGAGAGACGCCCAGGAGCTCCCGAAAAA...TATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp CGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCCAGGGACCCAATGTTTaGCTTGGTTCTCCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: RHVLHGCPHHARKTILFVQGPNV*LGSPEV
Trigger: GACTTCGGGAGAACCAAGCCAAACATTGGGTCCCTG...GACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAAGCCTCCCAAGTAGCTaGGATCACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: WDHRHLPWRPANICIFSRSLPSS*DHRHLP
Trigger: TGGCAGGTGCCTGTGATCCCAGCTACTTGGGAGGCT...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR TCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATTTGGTCTGTAGCAGTTaGGAGCGGCATTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDLVCSS*ERHLSS
Trigger: GCTGGACAAATGCCGCTCTCAACTGCTACAGACCAA...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR GCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGATTGCCCAGGCTAGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WDHRHLPWRPANICIFSRLPRLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCTAGCCTGGGCAA...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR CCA 90 bp GCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATATCCTGGGCGTCTCTCTaGGTCTCTGTGCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: AILRHVLHGCPHHARKTISWASL*VSVLER
Trigger: TCTTTCAAGCACAGAGACCCAGAGAGACGCCCAGGA...TATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATACGGCATGTGCTCCATaGATGTCCACATCATGCCAG +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDTACAP*MSTSCQ
Trigger: CTGGCATGATGTGGACATCCATGGAGCACATGCCGT...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp GTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGACAAGTACCAGTATTaGGCAACAACTGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: VGKQPFYGMCSMDVHIMPDKYQY*ATTGPH
Trigger: ATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTC...TGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGCAGTGCTTCCAACATaGCTAACAGAGATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDAVLPT*LTEILP
Trigger: GGGAAGGATCTCTGTTAGTCATGTTGGAAGCACTGC...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACTCAACTGTTTCTGGGTaGGCAAAGACCACACTCACT +
Preference number: 4 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHSTVSG*AKTTLT
Trigger: AGTGAGTGTGGTCTTTGCTCACCCAGAAACAGTTGA...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp ATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCTTCACACAAACAGCCAGGGGCCTTCGGTaGAGGACGCGCAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: IISYMSLNGIHSCPFTQTARGLR*RTRKGV
Trigger: AACACCTTTGCGCGTCCTTCACCGAAGGCCCCTGGC...TGTTTGTGTGAAGGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp GTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATGTGTCTCCATGAAGTaGATGACGCGAGCTCGCACA +
Preference number: 4 (lower is better)
Translates to: VLHGCPHHARKTILFVSKCVSMK*MTRART
Trigger: TGTGCGAGCTCGCGTCATTCACTTCATGGAGACACA...TTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp GAAAGGCTCCTACCATGGCATGCCTTGGCTCCTACGGTTTTACTTTCCCTCCACCTTTGTCTCCAAATTTaGAAGCTAGTCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ERLLPWHALAPTVLLSLHLCLQI*KLVIQS
Trigger: GCTCTGGATGACTAGCTTTCAAATTTGGAGACAAAG...GTGGAGGGAAAGTAAAACCGTAGGAGCCAAGGCATGCCATGGTAGGAGCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR GCA 90 bp CGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCAATGGCATCCATAGCTaGCCCTTCACACAAACAGGT +
Preference number: 4 (lower is better)
Translates to: RHVLHGCPHHARKTILFVNGIHS*PFTQTG
Trigger: ACCTGTTTGTGTGAAGGGGCAGCTATGGATGCCATT...GACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACACCCAATGTTTGGCTTaGTTCTCCCGAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHTQCLA*FSRSLH
Trigger: ATGGAGACTTCGGGAGAACCAAGCCAAACATTGGGT...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCATCCAGAGCAGGTaGCCAGTCAACATCTACAGA +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDVIQSR*PVNIYR
Trigger: TCTGTAGATGTTGACTGGCCACCTGCTCTGGATGAC...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp GGAAGCAGTGCTTCCAACATGACTAACAGAGATCCTTCCCTCTCCATTTTGACTGCAGTGCTTCCAACATaGCTAACAGAGATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSSASNMTNRDPSLSILTAVLPT*LTEILP
Trigger: GGGAAGGATCTCTGTTAGTCATGTTGGAAGCACTGC...AGTCAAAATGGAGAGGGAAGGATCTCTGTTAGTCATGTTGGAAGCACTGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR TCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATAACACCCAGTTCCTCTaGAAACAGGGGGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDNTQFL*KQGVSY
Trigger: ATAACTCACCCCCTGTTTTCAGAGGAACTGGGTGTT...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGCATACAGCCTTTGGTaGGTTTGGAGGACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDAYSLW*VWRTRK
Trigger: TTTCCTTGTCCTCCAAACTCACCAAAGGCTGTATGC...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCGCATACAGCCTTTGGTaGGTTTGGAGGACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHIAYSLW*VWRTRK
Trigger: TTTCCTTGTCCTCCAAACTCACCAAAGGCTGTATGC...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp AAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGCAGCTCCAGAATGTCTaGAGTCACATTCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: KTPLWWVNSHFTACAPWMQLQNV*SHIHQG
Trigger: TCCCTGATGAATGTGACTGCAGACATTCTGGAGCTG...CATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATCAGCTCCAGAATGTCTaGAGTCACATTCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDQLQNV*SHIHQG
Trigger: TCCCTGATGAATGTGACTGCAGACATTCTGGAGCTG...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCAGCTCTTTCCATCAATaGGAACACCCAGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHISSFHQ*EHPVPL
Trigger: CAGAGGAACTGGGTGTTCCCATTGATGGAAAGAGCT...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp GTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAATCGCAGCTAGGAAGTaGCAATCCTCAACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: VGKQPFYGMCSMDVHIMPIAARK*QSSTVS
Trigger: AGAAACAGTTGAGGATTGCCACTTCCTAGCTGCGAT...TGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCCCACACCACAGAATCTaGAGATACATCTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHIPHHRI*RYILDK
Trigger: CTTGTCCAAGATGTATCTTCAGATTCTGTGGTGTGG...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp TGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATGCAGTGCTTCCAACATaGCTAACAGAGATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: CSMDVHIMPGKPYSLSPNAVLPT*LTEILP
Trigger: GGGAAGGATCTCTGTTAGTCATGTTGGAAGCACTGC...ATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp GTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAAAACACCCAGTTCCTCTaGAAACAGGGGGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: VLHGCPHHARKTILFVSKNTQFL*KQGVSY
Trigger: ATAACTCACCCCCTGTTTTCAGAGGAACTGGGTGTT...TTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp TTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCACTATTGCCTCTCTTGTaGCAAGCTGCAAGTCACGTA +
Preference number: 4 (lower is better)
Translates to: LWWVNSHFTACAPWMSTSLLPLL*QAASHV
Trigger: TACGTGACTTGCAGCTTGTCACAAGAGAGGCAATAG...TGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp CGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCCTTTGTCTCCAAATTTaGAAGCTAGTCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RHVLHGCPHHARKTILFVLCLQI*KLVIQS
Trigger: GCTCTGGATGACTAGCTTTCAAATTTGGAGACAAAG...GACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACTTTTACCAGCAACCATaGAGCATGCTCTCTTACAGA +
Preference number: 4 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHFYQQP*SMLSYR
Trigger: TCTGTAAGAGAGCATGCTGCATGGTTGCTGGTAAAA...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp GCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATAATTCACCAGCTCAATTaGAAAGGGCCTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: AILRHVLHGCPHHARKTIIHQLN*KGPSIS
Trigger: GGAAATGGAAGGCCCTTTGCAATTGAGCTGGTGAAT...TATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACTCTCTTGTGACAAGCTaGAAGTCACGTACTTGGATT +
Preference number: 4 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHSLVTS*KSRTWI
Trigger: AATCCAAGTACGTGACTTGCAGCTTGTCACAAGAGA...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp AAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGATCCTCAACTGTTTCTaGGTGAGCAAAGACCACACT +
Preference number: 4 (lower is better)
Translates to: KTPLWWVNSHFTACAPWMILNCF*VSKDHT
Trigger: AGTGTGGTCTTTGCTCACCCAGAAACAGTTGAGGAT...CATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACAAGACACCGTTATGGTaGGTAAACAGCCATTTTACG +
Preference number: 4 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHKTPLW*VNSHFT
Trigger: CGTAAAATGGCTGTTTACCCACCATAACGGTGTCTT...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCTACCATGGCATGCCTTaGCTCCTACGGTTTTACTTT +
Preference number: 4 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHIYHGMP*LLRFYF
Trigger: AAAGTAAAACCGTAGGAGCCAAGGCATGCCATGGTA...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGACCACACCACAGAATCTaGAGATACATCTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: WDHRHLPWRPANICIFSRPHHRI*RYILDK
Trigger: CTTGTCCAAGATGTATCTTCAGATTCTGTGGTGTGG...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR GCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAAACAACTGGGCCACATaGTTGTTTTCCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: WDHRHLPWRPANICIFSRNNWAT*LFSSVS
Trigger: ACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTT...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR GCA 90 bp GTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAAAACAACTGGGCCACATaGTTGTTTTCCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: VLHGCPHHARKTILFVSKNNWAT*LFSSVS
Trigger: ACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTT...TTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp GTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCATGGAAGTTTGTAAGGTaGATGAAAATCCACACCACA +
Preference number: 4 (lower is better)
Translates to: VGKQPFYGMCSMDVHIMPWKFVR*MKIHTT
Trigger: TGTGGTGTGGATTTTCATGCACCTTACAAACTTCCA...TGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp AAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTTTTACCAGCAACCATaGAGCATGCTCTCTTACAGA +
Preference number: 4 (lower is better)
Translates to: KTPLWWVNSHFTACAPWMFYQQP*SMLSYR
Trigger: TCTGTAAGAGAGCATGCTGCATGGTTGCTGGTAAAA...CATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATTTCTGGGCCTTTCAATaGATTGGCATTGACAAGAGT +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDFWAFQ*IGIDKS
Trigger: ACTCTTGTCAATGCCAATGCATTGAAAGGCCCAGAA...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp GTTTTCAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCAATCCTCAACTGTTTCTaGGTGAGCAAAGACCACACT +
Preference number: 4 (lower is better)
Translates to: VFKTPLWWVNSHFTACAPILNCF*VSKDHT
Trigger: AGTGTGGTCTTTGCTCACCCAGAAACAGTTGAGGAT...TGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATACCCAATGTTTGGCTTaGTTCTCCCGAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CSMDVHIMPGKPYSLSPNTQCLA*FSRSLH
Trigger: ATGGAGACTTCGGGAGAACCAAGCCAAACATTGGGT...ATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGGTCATCCAGAGCAGGTaGCCAGTCAACATCTACAGA +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLVIQSR*PVNIYR
Trigger: TCTGTAGATGTTGACTGGCCACCTGCTCTGGATGAC...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCAAGAAACTTCAGTTCGAAAGGCTCCTACCATaGCATGCCTTGGCTCCTACG +
Preference number: 4 (lower is better)
Translates to: CSVIGLIRKTLETKKLQFERLLP*HALAPT
Trigger: CGTAGGAGCCAAGGCATGCCATGGTAGGAGCCTTTC...GAACTGAAGTTTCTTGGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp ACTTCATTGGTAATAGCTTGTTTGAGGCTTCCTGGGGAAAATAATGATGTCAGATCTCACAGCTGTTTCTaGCCCGGCAGCTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: TSLVIACLRLPGENNDVRSHSCF*PGSSNQ
Trigger: CTGATTAGAGCTGCCGGGTCAGAAACAGCTGTGAGA...TCTGACATCATTATTTTCCCCAGGAAGCCTCAAACAAGCTATTACCAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp CGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCATTTCTGTAGTTCATTaGGCAACTCCTTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: RHVLHGCPHHARKTILFVISVVH*ATPCME
Trigger: TTCCATACAAGGAGTTGCTCAATGAACTACAGAAAT...GACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATTTCTGTAGTTCATTaGGCAACTCCTTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHISVVH*ATPCME
Trigger: TTCCATACAAGGAGTTGCTCAATGAACTACAGAAAT...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp ATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGGTGAAATGTACTCTATaGGGATTCACCAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: MVGKQPFYGMCSMDVHIMVKCTL*GFTSSI
Trigger: AATTGAGCTGGTGAATCCTCATAGAGTACATTTCAC...CATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp TTTCAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGGAGGGAAATCTTGCTaGAATTACAGCTTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: FQDTVMVGKQPFYGMCSMGGKSC*NYSFLG
Trigger: ACCTAAGAAGCTGTAATTTCAGCAAGATTTCCCTCC...CATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp GTTTTCAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCAGGTTTCAACGTGGTATaGAACTATGTTGGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VFKTPLWWVNSHFTACAPGFNVV*NYVGSN
Trigger: GTTGGAACCAACATAGTTTCATACCACGTTGAAACC...TGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR GCA 90 bp GCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTATCTTCCAGTTCTTaGAGTCGAATTTTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: AILRHVLHGCPHHARKTILSSSS*SRIFLG
Trigger: TCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAG...TATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp AAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGCTATCTTCCAGTTCTTaGAGTCGAATTTTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KTPLWWVNSHFTACAPWMLSSSS*SRIFLG
Trigger: TCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAG...CATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp TGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATATTCACCAGCTCAATTaGAAAGGGCCTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: CSMDVHIMPGKPYSLSPNIHQLN*KGPSIS
Trigger: GGAAATGGAAGGCCCTTTGCAATTGAGCTGGTGAAT...ATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp ATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTCTCTTGTGACAAGCTaGAAGTCACGTACTTGGATT +
Preference number: 4 (lower is better)
Translates to: ILRHVLHGCPHHARKTILSLVTS*KSRTWI
Trigger: AATCCAAGTACGTGACTTGCAGCTTGTCACAAGAGA...GAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTTTAAAGCGTAGACTTTaGTCTGTAGCAGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRHVLHGCPHHARKTILFLKRRL*SVAVES
Trigger: GCTCTCAACTGCTACAGACCAAAGTCTACGCTTTAA...AAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp GTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAAGAGCAACTCCTTGTATaGAAGTTTGTAAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: VLHGCPHHARKTILFVSKEQLLV*KFVRCM
Trigger: CATGCACCTTACAAACTTCCATACAAGGAGTTGCTC...TTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp ATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGGAGGCCTCAACCTTTTaGCACACCTTTTTAATGAAA +
Preference number: 4 (lower is better)
Translates to: MVGKQPFYGMCSMDVHIMEASTF*HTFLMK
Trigger: TTTCATTAAAAAGGTGTGCCAAAAGGTTGAGGCCTC...CATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp CTTCACACAAACAGGTGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCAGCTCTTTCCATCAATaGGAACACCCAGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LHTNRCSVIGLIRKTLETSSFHQ*EHPVPL
Trigger: CAGAGGAACTGGGTGTTCCCATTGATGGAAAGAGCT...GGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCACCTGTTTGTGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp ATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCTTCACACAAACACAGGGACCCAATGTTTaGCTTGGTTCTCCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: IISYMSLNGIHSCPFTQTQGPNV*LGSPEV
Trigger: GACTTCGGGAGAACCAAGCCAAACATTGGGTCCCTG...TGTTTGTGTGAAGGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp ATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCAAGACACCGTTATGGTaGGTAAACAGCCATTTTACG +
Preference number: 4 (lower is better)
Translates to: ILRHVLHGCPHHARKTILKTPLW*VNSHFT
Trigger: CGTAAAATGGCTGTTTACCCACCATAACGGTGTCTT...GAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGAACAACTGGGCCACATaGTTGTTTTCCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLNNWAT*LFSSVS
Trigger: ACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTT...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp ATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCAAGGCTTTCATAACTaGCATTCTAGTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: MVGKQPFYGMCSMDVHIMQGFHN*HSSEYR
Trigger: TCTGTATTCACTAGAATGGCAGTTATGAAAGCCTTG...CATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCTCTGAAGATACATCTTaGACAAGTACCAGTATTGAG +
Preference number: 4 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHISEDTS*TSTSIE
Trigger: CTCAATACTGGTACTTGTCCAAGATGTATCTTCAGA...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp CTTCACACAAACAGGTGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCATCGCAGCTAGGAAGTaGCAATCCTCAACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LHTNRCSVIGLIRKTLETIAARK*QSSTVS
Trigger: AGAAACAGTTGAGGATTGCCACTTCCTAGCTGCGAT...GGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCACCTGTTTGTGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp GTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTCAAGACACCGTTATaGTGGGTAAACAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: VLHGCPHHARKTILFVSKFKTPL*WVNSHF
Trigger: AAAATGGCTGTTTACCCACCATAACGGTGTCTTGAA...TTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTGGTATATCTCTTGTaGAGGGAAATCTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LRHVLHGCPHHARKTILFVVYLL*REILLK
Trigger: TTTCAGCAAGATTTCCCTCCACAAGAGATATACCAC...AAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp GGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCACATGGTTTCAACGTaGTATGAAACTATGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GMCSMDVHIMPGKPYSLSHMVST*YETMLV
Trigger: AACCAACATAGTTTCATACCACGTTGAAACCATGTG...AGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp TTTCAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGTTCTCTTCCAGAGGATaGAAAATTAAAACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FQDTVMVGKQPFYGMCSMFSSRG*KIKTLC
Trigger: GCAGAGAGTTTTAATTTTTCATCCTCTGGAAGAGAA...CATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR TCA 90 bp ACTTCATTGGTAATAGCTTGTTTGAGGCTTCCTGGGGAAAATAATGATGTCAGACTATTGCCTCTCTTGTaGCAAGCTGCAAGTCACGTA +
Preference number: 4 (lower is better)
Translates to: TSLVIACLRLPGENNDVRLLPLL*QAASHV
Trigger: TACGTGACTTGCAGCTTGTCACAAGAGAGGCAATAG...TCTGACATCATTATTTTCCCCAGGAAGCCTCAAACAAGCTATTACCAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGATCAGTGGGAACATATTaGATAATTATAACCGCCTCA +
Preference number: 4 (lower is better)
Translates to: WDHRHLPWRPANICIFSRSVGTY*IIITAS
Trigger: TGAGGCGGTTATAATTATTCAATATGTTCCCACTGA...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR TCA 90 bp GTTTTCAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATCAGTGGGAACATATTaGATAATTATAACCGCCTCA +
Preference number: 4 (lower is better)
Translates to: VFKTPLWWVNSHFTACAPSVGTY*IIITAS
Trigger: TGAGGCGGTTATAATTATTCAATATGTTCCCACTGA...TGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407787.5
CDS-3UTR GCA 90 bp TGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTTCATATGTCCTATTaGCTCTCTTGTGACAAGCTG +
Preference number: 4 (lower is better)
Translates to: CSMDVHIMPGKPYSLSPNFHMSY*LSCDKL
Trigger: CAGCTTGTCACAAGAGAGGCAATAGGACATATGAAA...ATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAGTTCAAATCCTAGCTTaGTCACTTAATAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: WDHRHLPWRPANICIFSRVQILA*SLNSCV
Trigger: TACACAGCTATTAAGTGAGCAAGCTAGGATTTGAAC...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR CCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGATCTGAAGATACATCTTaGACAAGTACCAGTATTGAG +
Preference number: 4 (lower is better)
Translates to: WDHRHLPWRPANICIFSRSEDTS*TSTSIE
Trigger: CTCAATACTGGTACTTGTCCAAGATGTATCTTCAGA...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR CCA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATAATTTTCTTGGGAGGTaGGTTCATAACTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDNFLGR*VHNFQN
Trigger: ATTTTGGAAGTTATGAACCCACCTCCCAAGAAAATT...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTCAAGACACCGTTATaGTGGGTAAACAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: CSMDVHIMPGKPYSLSPNFKTPL*WVNSHF
Trigger: AAAATGGCTGTTTACCCACCATAACGGTGTCTTGAA...ATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCAAGAAACTTCAGTTCATGTTGGTTCCAACGTaGCTGACTCCTTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSVIGLIRKTLETKKLQFMLVPT*LTPLCP
Trigger: TGGACACAAAGGAGTCAGCCACGTTGGAACCAACAT...GAACTGAAGTTTCTTGGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316752.11
3UTR CAA 72 bp ATCAAACACATGGTTTCAACGTGGTATGAAACTATGTaGGTTCCAACGTGGCTGACTCCTTTGTGTCCATTA +
Preference number: 4 (lower is better)
Translates to: IKHMVSTWYETM*VPTWLTPLCPL
Trigger: TAATGGACACAAAGGAGTCAGCCACGTTGGAACCAACATAGTTTCATACCACGTTGAAACCATGTGTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp TGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTCAGTGGGAACATATTaGATAATTATAACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: CSMDVHIMPGKPYSLSPNSVGTY*IIITVG
Trigger: CCCCACTGTTATAATTATTCAATATGTTCCCACTGA...ATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp ATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCTTCACACAAACACCACACCACAGAATCTaGAGATACATCTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: IISYMSLNGIHSCPFTQTPHHRI*RYILDK
Trigger: CTTGTCCAAGATGTATCTTCAGATTCTGTGGTGTGG...TGTTTGTGTGAAGGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp TTCCAAAAGTTAATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCTCAACTGTTTCTGGGTaGGCAAAGACCACACTCACT +
Preference number: 4 (lower is better)
Translates to: FQKLIISYMSLNGIHSCPSTVSG*AKTTLT
Trigger: AGTGAGTGTGGTCTTTGCTCACCCAGAAACAGTTGA...GGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAATTAACTTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR GCA 90 bp ATTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTAACAACTGGGCCACATaGTTGTTTTCCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: IINTIFQFLQSNFLGRWVNNWAT*LFSSVS
Trigger: ACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTT...AACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR GCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGTTTCATATGTCCTATTaGCTCTCTTGTGACAAGCTG +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLFHMSY*LSCDKL
Trigger: CAGCTTGTCACAAGAGAGGCAATAGGACATATGAAA...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGCTTCACACAAACAGGTaGTCAGTAATAGGGCTTATT +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLLHTNR*SVIGLI
Trigger: AATAAGCCCTATTACTGAGCACCTGTTTGTGTGAAG...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGGAGGCCTCAACCTTTTaGCACACCTTTTTAATGAAA +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLEASTF*HTFLMK
Trigger: TTTCATTAAAAAGGTGTGCCAAAAGGTTGAGGCCTC...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TTTCAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGTGCAAGTCACGTACTTaGATTTTGTTAGATGAGTTA +
Preference number: 4 (lower is better)
Translates to: FQDTVMVGKQPFYGMCSMCKSRT*ILLDEL
Trigger: TAACTCATCTAACAAAATCCAAGTACGTGACTTGCA...CATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGATTTCTTCATCTTGTATaGAAGTTTGTAAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: WDHRHLPWRPANICIFSRFLHLV*KFVRCM
Trigger: CATGCACCTTACAAACTTCCATACAAGATGAAGAAA...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR TCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGTTCTCTTCCAGAGGATaGAAAATTAAAACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLFSSRG*KIKTLC
Trigger: GCAGAGAGTTTTAATTTTTCATCCTCTGGAAGAGAA...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGCAAGGCTTTCATAACTaGCATTCTAGTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLQGFHN*HSSEYR
Trigger: TCTGTATTCACTAGAATGGCAGTTATGAAAGCCTTG...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR GCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGAATGTGTCCTGTTTGTaGACCTCTCTAAATGAAAGA +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLNVSCL*TSLNER
Trigger: TCTTTCATTTAGAGAGGTGCACAAACAGGACACATT...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp ACTTCATTGGTAATAGCTTGTTTGAGGCTTCCTGGGGAAAATAATGATGTCAGAGAGCAACTCCTTGTATaGAAGTTTGTAAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: TSLVIACLRLPGENNDVREQLLV*KFVRCM
Trigger: CATGCACCTTACAAACTTCCATACAAGGAGTTGCTC...TCTGACATCATTATTTTCCCCAGGAAGCCTCAAACAAGCTATTACCAATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CCA 90 bp CTTCACACAAACAGGTGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCTCATTATTCATAGTTTaGTTTGTGGGGGTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LHTNRCSVIGLIRKTLETSLFIV*FVGVKE
Trigger: CTCTTTCACCCCCACAAACCAAACTATGAATAATGA...GGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCACCTGTTTGTGTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp GTTTCCAGAAATTTCTGTAGTTCATTGAGCAACTCTTTATTAGGTATTGTCCCTCCACACCACAGAATCTaGAGATACATCTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: VSRNFCSSLSNSLLGIVPPHHRI*RYILDK
Trigger: CTTGTCCAAGATGTATCTTCAGATTCTGTGGTGTGG...AGGGACAATACCTAATAAAGAGTTGCTCAATGAACTACAGAAATTTCTGGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR TCA 90 bp ATTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTCCAAATCCTAGGTTTTaGATTCAGTCAGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: IINTIFQFLQSNFLGRWVPNPRF*IQSDCS
Trigger: TGAACAGTCTGACTGAATTCAAAACCTAGGATTTGG...AACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR GCA 90 bp TTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTCGTTCAAATCCTAGCTTaGTCACTTAATAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LSILSSSSCSRIFLGGGFVQILA*SLNSCV
Trigger: TACACAGCTATTAAGTGAGCAAGCTAGGATTTGAAC...GAACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGAATTTTCTTGGGAGGTaGGTTCATAACTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLNFLGR*VHNFQN
Trigger: ATTTTGGAAGTTATGAACCCACCTCCCAAGAAAATT...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGTGCAAGTCACGTACTTaGATTTTGTTAGATGAGTTA +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLCKSRT*ILLDEL
Trigger: TAACTCATCTAACAAAATCCAAGTACGTGACTTGCA...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CCA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGTGCATATCAAACACATaGTTTCAACGTGGTATGAAA +
Preference number: 4 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLCISNT*FQRGMK
Trigger: TTTCATACCACGTTGAAACCATGTGTTTGATATGCA...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp TTCCAAAAGTTAATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCCTTCTGTTTTCACTTTaGCAGAATGGCTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: FQKLIISYMSLNGIHSCPLLFSL*QNGFSI
Trigger: GATAGAGAAGCCATTCTGTCAAAGTGAAAACAGAAG...GGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAATTAACTTTTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp TTCCAAAAGTTAATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCGTGAAATGTACTCTATaGGGATTCACCAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: FQKLIISYMSLNGIHSCPVKCTL*GFTSSI
Trigger: AATTGAGCTGGTGAATCCTCATAGAGTACATTTCAC...GGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAATTAACTTTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR TCA 90 bp GTTTCCAGAAATTTCTGTAGTTCATTGAGCAACTCTTTATTAGGTATTGTCCCTTCCCTTAAAGTCCTGTaGGGTGGGTATTATCATCAT +
Preference number: 4 (lower is better)
Translates to: VSRNFCSSLSNSLLGIVPSLKVL*GGYYHH
Trigger: ATGATGATAATACCCACCTCACAGGACTTTAAGGGA...AGGGACAATACCTAATAAAGAGTTGCTCAATGAACTACAGAAATTTCTGGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CCA 90 bp TTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTCAATTTTCTTGGGAGGTaGGTTCATAACTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LSILSSSSCSRIFLGGGFNFLGR*VHNFQN
Trigger: ATTTTGGAAGTTATGAACCCACCTCCCAAGAAAATT...GAACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CCA 90 bp TTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTCTTTCTTCATCTTGTATaGAAGTTTGTAAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: LSILSSSSCSRIFLGGGFFLHLV*KFVRCM
Trigger: CATGCACCTTACAAACTTCCATACAAGATGAAGAAA...GAACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CCA 90 bp GTTTCCAGAAATTTCTGTAGTTCATTGAGCAACTCTTTATTAGGTATTGTCCCTACTGAAGCTGGAAAGTaGTGGAACTGGGATTCAAAT +
Preference number: 4 (lower is better)
Translates to: VSRNFCSSLSNSLLGIVPTEAGK*WNWDSN
Trigger: ATTTGAATCCCAGTTCCACCACTTTCCAGCTTCAGT...AGGGACAATACCTAATAAAGAGTTGCTCAATGAACTACAGAAATTTCTGGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR GCA 90 bp GTTTCCAGAAATTTCTGTAGTTCATTGAGCAACTCTTTATTAGGTATTGTCCCTCTATCTTCCAGTTCTTaGAGTCGAATTTTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: VSRNFCSSLSNSLLGIVPLSSSS*SRIFLG
Trigger: TCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAG...AGGGACAATACCTAATAAAGAGTTGCTCAATGAACTACAGAAATTTCTGGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
3UTR CAA 72 bp ATTTTAAAGGTGGTATATCTCTTGTGGAGGGAAATCTaGCTGAAATTACAGCTTCTTAGGTTAACAGAGAAT +
Preference number: 4 (lower is better)
Translates to: ILKVVYLLWREI*LKLQLLRLTEN
Trigger: ATTCTCTGTTAACCTAAGAAGCTGTAATTTCAGCAAGATTTCCCTCCACAAGAGATATACCACCTTTAAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS GCA 90 bp TTCTCCCTTCTTGTTTGTAGAGGAAATCCGAAAAACTGCCTGGTTTaGCACCTCACCCTACCTCCCCCACGAGCGAAGGAGTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: FSLLVCRGNPKNCLV*HLTLPPPRAKECVR
Trigger: CCGCACGCACTCCTTCGCTCGTGGGGGAGGTAGGGTGAGGTGGCAAACCAGGCAGTTTTTCGGATTTCCTCTACAAACAAGAAGGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421319.5
CDS GCA 90 bp TGGCCAGTCAACATCTACAGACTCAACATCCAGCTCCAGAATGTCTaGAGTCACATTCATCAGGGACCCAATGTTTGGCTTGGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: WPVNIYRLNIQLQNV*SHIHQGPNVWLGSP
Trigger: GGGAGAACCAAGCCAAACATTGGGTCCCTGATGAATGTGACTGCAGACATTCTGGAGCTGGATGTTGAGTCTGTAGATGTTGACTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS-3UTR CAA 90 bp GGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTTCAGGGACCCAATGTTaGGCTTGGTTCTCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: GMCSMDVHIMPGKPYSLSSGTQC*AWFSRS
Trigger: ACTTCGGGAGAACCAAGCCAAACATTGGGTCCCTGA...AGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: WDHRHLPWRPANICIFSRNWATC*FSSVSG
Trigger: CCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTT...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR CAA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCGGACAAGTACCAGTATaGAGCAACAACTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHIGQVPV*SNNWAT
Trigger: TGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCC...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp CAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATCAGCCTTTGGTGAGTTaGGAGGACAAGGAAACTGCT +
Preference number: 5 (lower is better)
Translates to: QDTVMVGKQPFYGMCSMDQPLVS*EDKETA
Trigger: AGCAGTTTCCTTGTCCTCCAAACTCACCAAAGGCTG...ATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp GTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAACAGCGCATACAGCCTTaGGTGAGTTTGGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: VLHGCPHHARKTILFVSKQRIQP*VSLEDK
Trigger: CTTGTCCTCCAAACTCACCAAAGGCTGTATGCGCTG...TTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS TCA 90 bp GGGCATATCGCAGCTAGGAAGTGGCAATCCTCAACTGTTTCTGGGTaGGCAAAGACCACACTCACTTCAAACAAGCTCTTTCCATCAATG +
Preference number: 5 (lower is better)
Translates to: GHIAARKWQSSTVSG*AKTTLTSNKLFPSM
Trigger: CATTGATGGAAAGAGCTTGTTTGAAGTGAGTGTGGTCTTTGCTCACCCAGAAACAGTTGAGGATTGCCACTTCCTAGCTGCGATATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAGGACAAGTACCAGTATaGAGCAACAACTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: WDHRHLPWRPANICIFSRGQVPV*SNNWAT
Trigger: TGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCC...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR CAA 90 bp GGAAGCAGTGCTTCCAACATGACTAACAGAGATCCTTCCCTCTCCATTTTGACTGGACAAGTACCAGTATaGAGCAACAACTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: GSSASNMTNRDPSLSILTGQVPV*SNNWAT
Trigger: TGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCC...AGTCAAAATGGAGAGGGAAGGATCTCTGTTAGTCATGTTGGAAGCACTGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CAA 90 bp ATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGGATTCACCAGCTCAATaGCAAAGGGCCTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: MVGKQPFYGMCSMDVHIMDSPAQ*QRAFHF
Trigger: GAAATGGAAGGCCCTTTGCAATTGAGCTGGTGAATC...CATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp TGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATGACCCAATGTTTGGCTaGGTTCTCCCGAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: CSMDVHIMPGKPYSLSPNDPMFG*VLPKSP
Trigger: TGGAGACTTCGGGAGAACCAAGCCAAACATTGGGTC...ATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp TGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTCAGGGACCCAATGTTaGGCTTGGTTCTCCCGAAGT +
Preference number: 5 (lower is better)
Translates to: CSMDVHIMPGKPYSLSPNSGTQC*AWFSRS
Trigger: ACTTCGGGAGAACCAAGCCAAACATTGGGTCCCTGA...ATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS CCA 90 bp TTTCACTTTGACAGAATGGCTTCTCTATCTTTAAAGCGTAGACTTTaGTCTGTAGCAGTTGAGAGCGGCATTTGTCCAGCCACGGCATCG +
Preference number: 5 (lower is better)
Translates to: FHFDRMASLSLKRRL*SVAVESGICPATAS
Trigger: CGATGCCGTGGCTGGACAAATGCCGCTCTCAACTGCTACAGACCAAAGTCTACGCTTTAAAGATAGAGAAGCCATTCTGTCAAAGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000602599.1
CDS-3UTR CAA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLNWATC*FSSVSG
Trigger: CCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTT...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCTGCAGTCGAATTTTCTaGGGAGGTGGGTTCATAACT +
Preference number: 5 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHICSRIF*GGGFIT
Trigger: AGTTATGAACCCACCTCCCAAGAAAATTCGACTGCA...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp ACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACACTATCTTCCAGTTCTaGCAGTCGAATTTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: TVMVGKQPFYGMCSMDVHTIFQF*QSNFLG
Trigger: CCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGT...GTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp CTTCACACAAACAGGTGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCCAGCGCATACAGCCTTaGGTGAGTTTGGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: LHTNRCSVIGLIRKTLETQRIQP*VSLEDK
Trigger: CTTGTCCTCCAAACTCACCAAAGGCTGTATGCGCTG...GGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCACCTGTTTGTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp TTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCAGATTCACCAGCTCAATaGCAAAGGGCCTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: LWWVNSHFTACAPWMSTSDSPAQ*QRAFHF
Trigger: GAAATGGAAGGCCCTTTGCAATTGAGCTGGTGAATC...TGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp GCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATAAAGGTGGTATATCTCTaGTGGAGGGAAATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AILRHVLHGCPHHARKTIKVVYL*WREILL
Trigger: CAGCAAGATTTCCCTCCACAAGAGATATACCACCTT...TATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp ATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGGGGCCTTTCAATGCATaGGCATTGACAAGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: MVGKQPFYGMCSMDVHIMGPFNA*ALTRVK
Trigger: TTTCACTCTTGTCAATGCCAATGCATTGAAAGGCCC...CATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS CCA 90 bp CAGCTCCAGAATGTCTGCAGTCACATTCATCAGGGACCCAATGTTTaGCTTGGTTCTCCCGAAGTCTCCATGTACAAACTCTTTAATGTA +
Preference number: 5 (lower is better)
Translates to: QLQNVCSHIHQGPNV*LGSPEVSMYKLFNV
Trigger: TACATTAAAGAGTTTGTACATGGAGACTTCGGGAGAACCAAGCCAAACATTGGGTCCCTGATGAATGTGACTGCAGACATTCTGGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS-3UTR CAA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGGGACAAGTACCAGTATaGAGCAACAACTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLGQVPV*SNNWAT
Trigger: TGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCC...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp TTTCAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGTGCAGTCGAATTTTCTaGGGAGGTGGGTTCATAACT +
Preference number: 5 (lower is better)
Translates to: FQDTVMVGKQPFYGMCSMCSRIF*GGGFIT
Trigger: AGTTATGAACCCACCTCCCAAGAAAATTCGACTGCA...CATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp GGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTAGAGGCCTCAACCTTTaGGCACACCTTTTTAATGAA +
Preference number: 5 (lower is better)
Translates to: GMCSMDVHIMPGKPYSLSRGLNL*AHLFNE
Trigger: TTCATTAAAAAGGTGTGCCAAAAGGTTGAGGCCTCT...AGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp CTTCACACAAACAGGTGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCCAGCCTTTGGTGAGTTaGGAGGACAAGGAAACTGCT +
Preference number: 5 (lower is better)
Translates to: LHTNRCSVIGLIRKTLETQPLVS*EDKETA
Trigger: AGCAGTTTCCTTGTCCTCCAAACTCACCAAAGGCTG...GGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCACCTGTTTGTGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp ATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGTTGGTAATAGCTTGTTaGAGGCTTCCTGGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: MVGKQPFYGMCSMDVHIMLVIAC*RLPGEN
Trigger: ATTTTCCCCAGGAAGCCTCAAACAAGCTATTACCAA...CATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp CATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTTTCATTGGTAATAGCTaGTTTGAGGCTTCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HFTACAPWMSTSCQENHTFIGNS*FEASWG
Trigger: TCCCCAGGAAGCCTCAAACAAGCTATTACCAATGAA...AGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAGTAACTTTGGGCAGGTaGCTTAACCTCTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: WDHRHLPWRPANICIFSRVTLGR*LNLSVS
Trigger: AGATACAGAGAGGTTAAGCAACCTGCCCAAAGTTAC...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR CAA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAAATAGCTGTGTAACTTaGGGCAGGTTGCTTAACCTC +
Preference number: 5 (lower is better)
Translates to: WDHRHLPWRPANICIFSRNSCVT*GRLLNL
Trigger: GAGGTTAAGCAACCTGCCCAAAGTTACACAGCTATT...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR CAA 90 bp TGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCAAGAAACTTCAGTTCAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: CSVIGLIRKTLETKKLQFNWATC*FSSVSG
Trigger: CCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTT...GAACTGAAGTTTCTTGGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp ATTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: IINTIFQFLQSNFLGRWVNWATC*FSSVSG
Trigger: CCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTT...AACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CAA 90 bp CATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTAGGCACTGTAGGTCTTaGTCTTTTCTTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: HFTACAPWMSTSCQENHTRHCRS*SFLLHL
Trigger: AAGGTGAAGAAGAAAAGACAAAGACCTACAGTGCCT...AGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp TGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCAAGAAACTTCAGTTCGACCCAATGTTTGGCTaGGTTCTCCCGAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: CSVIGLIRKTLETKKLQFDPMFG*VLPKSP
Trigger: TGGAGACTTCGGGAGAACCAAGCCAAACATTGGGTC...GAACTGAAGTTTCTTGGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp GCCATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATATCTTTGTCTCCAAATTaGAAAGCTAGTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: AILRHVLHGCPHHARKTISLSPN*KASHPE
Trigger: CTCTGGATGACTAGCTTTCAAATTTGGAGACAAAGA...TATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp AAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTTGTGGAGGGAAATCTaGCTGAAATTACAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: KTPLWWVNSHFTACAPWMLWREI*LKLQLL
Trigger: AAGAAGCTGTAATTTCAGCAAGATTTCCCTCCACAA...CATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp GGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTGTCTTGGGCTATTTTTaGGTAAGCTCTTTGATTTGG +
Preference number: 5 (lower is better)
Translates to: GMCSMDVHIMPGKPYSLSVLGYF*VSSLIW
Trigger: CCAAATCAAAGAGCTTACCAAAAAATAGCCCAAGAC...AGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp GTTTTCAAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCAACGTGGCTGACTCCTTaGTGTCCATTAAAACCATTT +
Preference number: 5 (lower is better)
Translates to: VFKTPLWWVNSHFTACAPTWLTP*CPLKPF
Trigger: AAATGGTTTTAATGGACACAAAGGAGTCAGCCACGT...TGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS CCA 90 bp GTAAGGTGCATGAAAATCCACACCACAGAATCTGAAGATACATCTTaGACAAGTACCAGTATTGAGCAACAACTGGGCCACATGCTTGTT +
Preference number: 5 (lower is better)
Translates to: VRCMKIHTTESEDTS*TSTSIEQQLGHMLV
Trigger: AACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATGTATCTTCAGATTCTGTGGTGTGGATTTTCATGCACCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316752.11
ENST00000398658.2
ENST00000407787.5
ENST00000421319.5
ENST00000430495.5
ENST00000602599.1
CDS-3UTR CAA 90 bp TTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCAGCTTCTGTTTTCACTTaGACAGAATGGCTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: LWWVNSHFTACAPWMSTSASVFT*TEWLLY
Trigger: ATAGAGAAGCCATTCTGTCAAAGTGAAAACAGAAGC...TGATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCTTTAAATTTGAGTTCTaGGAAGCAGTGCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHIFKFEF*EAVLPT
Trigger: TGTTGGAAGCACTGCTTCCAAGAACTCAAATTTAAA...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp GTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTCCACATCTCTGTATCGCTTTATTaGTCCAAATTAAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: VMVGKQPFYGMCSMDVHISVSLY*SKLRHC
Trigger: ACAGTGCCTTAATTTGGACAAATAAAGCGATACAGA...GATGTGGACATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp ATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTCTTTGTCTCCAAATTaGAAAGCTAGTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: ILRHVLHGCPHHARKTILSLSPN*KASHPE
Trigger: CTCTGGATGACTAGCTTTCAAATTTGGAGACAAAGA...GAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp TGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCAAGAAACTTCAGTTCCTACCATGGCATGCCTaGGCTCCTACGGTTTTACTT +
Preference number: 5 (lower is better)
Translates to: CSVIGLIRKTLETKKLQFLPWHA*APTVLL
Trigger: AAGTAAAACCGTAGGAGCCAAGGCATGCCATGGTAG...GAACTGAAGTTTCTTGGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp AAGACACCGTTATGGTGGGTAAACAGCCATTTTACGGCATGTGCTCCATGGATGTTCTTAACCCTGGGATaGAAGTTATTAAAGGCACTT +
Preference number: 5 (lower is better)
Translates to: KTPLWWVNSHFTACAPWMFLTLG*KLLKAL
Trigger: AAGTGCCTTTAATAACTTCAATCCCAGGGTTAAGAA...CATCCATGGAGCACATGCCGTAAAATGGCTGTTTACCCACCATAACGGTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp TCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTGTCTCCAAATTTGTGGTATGAAACTATGTaGGTTCCAACGTGGCTGACT +
Preference number: 5 (lower is better)
Translates to: SMDVHIMPGKPYSLSPNLWYETM*VPTWLT
Trigger: AGTCAGCCACGTTGGAACCAACATAGTTTCATACCA...CAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp TGGGATCACAGGCACCTGCCATGGCGCCCAGCTAATATTTGTATTTTTAGTAGAGTCAGTGGGAACATATaGAATAATTATAACCGCCTC +
Preference number: 5 (lower is better)
Translates to: WDHRHLPWRPANICIFSRVSGNI*NNYNRL
Trigger: GAGGCGGTTATAATTATTCAATATGTTCCCACTGAC...TCTACTAAAAATACAAATATTAGCTGGGCGCCATGGCAGGTGCCTGTGATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398658.2
CDS-3UTR CAA 90 bp ATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCGTCAGTGGGAACATATaGAATAATTATAACCGCCTC +
Preference number: 5 (lower is better)
Translates to: ILRHVLHGCPHHARKTILVSGNI*NNYNRL
Trigger: GAGGCGGTTATAATTATTCAATATGTTCCCACTGAC...GAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407787.5
CDS-3UTR CAA 90 bp CTTCACACAAACAGGTGCTCAGTAATAGGGCTTATTAGAAAGACCCTAGAAACCACTATCTTCCAGTTCTaGCAGTCGAATTTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LHTNRCSVIGLIRKTLETTIFQF*QSNFLG
Trigger: CCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGT...GGTTTCTAGGGTCTTTCTAATAAGCCCTATTACTGAGCACCTGTTTGTGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp ATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTTAAATTTGAGTTCTaGGAAGCAGTGCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: ILRHVLHGCPHHARKTILFKFEF*EAVLPT
Trigger: TGTTGGAAGCACTGCTTCCAAGAACTCAAATTTAAA...GAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp GGAAGCAGTGCTTCCAACATGACTAACAGAGATCCTTCCCTCTCCATTTTGACTTTTAAATTTGAGTTCTaGGAAGCAGTGCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: GSSASNMTNRDPSLSILTFKFEF*EAVLPT
Trigger: TGTTGGAAGCACTGCTTCCAAGAACTCAAATTTAAA...AGTCAAAATGGAGAGGGAAGGATCTCTGTTAGTCATGTTGGAAGCACTGCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CAA 90 bp ATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCGTGAATACAGACTGTTaGTTTTTGGCTGGCTTAAAA +
Preference number: 5 (lower is better)
Translates to: ILRHVLHGCPHHARKTILVNTDC*FLAGLK
Trigger: TTTTAAGCCAGCCAAAAACAAACAGTCTGTATTCAC...GAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS-3UTR CAA 90 bp CATTTTACGGCATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTGGAAAACCATACTCTTaGTCTCCAAATTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: HFTACAPWMSTSCQENHTGKPYS*SPNLKA
Trigger: AGCTTTCAAATTTGGAGACAAAGAGTATGGTTTTCC...AGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACATGCCGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS GCA 90 bp CAAATCCTAGGTTTTGAATTCAGTCAGACTGTTCAAATCCTAGCTTaGTCACTTAATAGCTGTGTAACTTTGGGCAGGTTGCTTAACCTC +
Preference number: 5 (lower is better)
Translates to: QILGFEFSQTVQILA*SLNSCVTLGRLLNL
Trigger: GAGGTTAAGCAACCTGCCCAAAGTTACACAGCTATTAAGTGAGCAAGCTAGGATTTGAACAGTCTGACTGAATTCAAAACCTAGGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398658.2
ENST00000430495.5
CDS CCA 90 bp AATCTGAAGATACATCTTGGACAAGTACCAGTATTGAGCAACAACTaGGCCACATGCTTGTTTTCCTCAGTCAGTGGGAACATATTGAAT +
Preference number: 5 (lower is better)
Translates to: NLKIHLGQVPVLSNN*ATCLFSSVSGNILN
Trigger: ATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATGTATCTTCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316752.11
ENST00000398658.2
ENST00000407787.5
ENST00000421319.5
ENST00000430495.5
ENST00000602599.1
CDS CCA 90 bp TGTTTACATGGCAACTTACAGGAAGTGGCAATCCTCAACTGTTTCTaGGTGAGCAAAGACCACACTCACTTCAAACAAGCTCTAAAAATT +
Preference number: 5 (lower is better)
Translates to: CLHGNLQEVAILNCF*VSKDHTHFKQALKI
Trigger: AATTTTTAGAGCTTGTTTGAAGTGAGTGTGGTCTTTGCTCACCCAGAAACAGTTGAGGATTGCCACTTCCTGTAAGTTGCCATGTAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS-3UTR CAA 90 bp ATTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTGTAACTTTGGGCAGGTaGCTTAACCTCTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: IINTIFQFLQSNFLGRWVVTLGR*LNLSVS
Trigger: AGATACAGAGAGGTTAAGCAACCTGCCCAAAGTTAC...AACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CAA 90 bp ATTATCAATACTATCTTCCAGTTCTTGCAGTCGAATTTTCTTGGGAGGTGGGTTAATAGCTGTGTAACTTaGGGCAGGTTGCTTAACCTC +
Preference number: 5 (lower is better)
Translates to: IINTIFQFLQSNFLGRWVNSCVT*GRLLNL
Trigger: GAGGTTAAGCAACCTGCCCAAAGTTACACAGCTATT...AACCCACCTCCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGTATTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS CCA 90 bp AAACCAAACAGCATTAACAATTTTACACCATTGACGTTGTTTACATaGCAACTTACAGGAAGTGGCAATCCTCAACTGTTTCTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: KPNSINNFTPLTLFT*QLTGSGNPQLFLGE
Trigger: CTCACCCAGAAACAGTTGAGGATTGCCACTTCCTGTAAGTTGCCATGTAAACAACGTCAATGGTGTAAAATTGTTAATGCTGTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS GCA 90 bp ATACATCTTGGACAAGTACCAGTATTGAGCAACAACTGGGCCACATaGTTGTTTTCCTCAGTCAGTGGGAACATATTGAATAATTATAAC +
Preference number: 5 (lower is better)
Translates to: IHLGQVPVLSNNWAT*LFSSVSGNILNNYN
Trigger: GTTATAATTATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316752.11
ENST00000398658.2
ENST00000407787.5
ENST00000421319.5
ENST00000430495.5
ENST00000602599.1
CDS-3UTR CAA 90 bp GTTTCCAGAAATTTCTGTAGTTCATTGAGCAACTCTTTATTAGGTATTGTCCCTTGCAGTCGAATTTTCTaGGGAGGTGGGTTCATAACT +
Preference number: 5 (lower is better)
Translates to: VSRNFCSSLSNSLLGIVPCSRIF*GGGFIT
Trigger: AGTTATGAACCCACCTCCCAAGAAAATTCGACTGCA...AGGGACAATACCTAATAAAGAGTTGCTCAATGAACTACAGAAATTTCTGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CAA 90 bp TTCCAAAAGTTAATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCAGGCACTGTAGGTCTTaGTCTTTTCTTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: FQKLIISYMSLNGIHSCPRHCRS*SFLLHL
Trigger: AAGGTGAAGAAGAAAAGACAAAGACCTACAGTGCCT...GGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAATTAACTTTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp ACTTCATTGGTAATAGCTTGTTTGAGGCTTCCTGGGGAAAATAATGATGTCAGAGCCAAAAGAACTTCATaGGTAATAGCTTGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: TSLVIACLRLPGENNDVRAKRTS*VIACLR
Trigger: CCTCAAACAAGCTATTACCAATGAAGTTCTTTTGGC...TCTGACATCATTATTTTCCCCAGGAAGCCTCAAACAAGCTATTACCAATGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp GTTTCCAGAAATTTCTGTAGTTCATTGAGCAACTCTTTATTAGGTATTGTCCCTACTATCTTCCAGTTCTaGCAGTCGAATTTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: VSRNFCSSLSNSLLGIVPTIFQF*QSNFLG
Trigger: CCCAAGAAAATTCGACTGCAAGAACTGGAAGATAGT...AGGGACAATACCTAATAAAGAGTTGCTCAATGAACTACAGAAATTTCTGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS-3UTR CAA 90 bp ATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCTTCACACAAACAGTGAATACAGACTGTTaGTTTTTGGCTGGCTTAAAA +
Preference number: 5 (lower is better)
Translates to: IISYMSLNGIHSCPFTQTVNTDC*FLAGLK
Trigger: TTTTAAGCCAGCCAAAAACAAACAGTCTGTATTCAC...TGTTTGTGTGAAGGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp TTCCAAAAGTTAATTATCAGTTACATGAGTTTAAATGGCATCCATAGCTGCCCCGGAAAACCATACTCTTaGTCTCCAAATTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: FQKLIISYMSLNGIHSCPGKPYS*SPNLKA
Trigger: AGCTTTCAAATTTGGAGACAAAGAGTATGGTTTTCC...GGGGCAGCTATGGATGCCATTTAAACTCATGTAACTGATAATTAACTTTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316752.11
CDS-3UTR CAA 90 bp GTTTCCAGAAATTTCTGTAGTTCATTGAGCAACTCTTTATTAGGTATTGTCCCTGTCAGTGGGAACATATaGAATAATTATAACTACCCG +
Preference number: 5 (lower is better)
Translates to: VSRNFCSSLSNSLLGIVPVSGNI*NNYNYP
Trigger: CGGGTAGTTATAATTATTCAATATGTTCCCACTGAC...AGGGACAATACCTAATAAAGAGTTGCTCAATGAACTACAGAAATTTCTGGAAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS TCA 72 bp AAGTGGTGCTCATCCACGTACTGTGTCTCCATGAAGTaGATGACGCGAGCTCGCACAGCCAGGGGCCTTCGG +
Preference number: 6 (lower is better)
Translates to: KWCSSTYCVSMK*MTRARTARGLR
Trigger: CCGAAGGCCCCTGGCTGTGCGAGCTCGCGTCATTCACTTCATGGAGACACAGTACGTGGATGAGCACCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS GCA 72 bp CTTGTTTGTAGAGGAAATCCGAAAAACTGCCTGGTTTaGCACCTCACCCTACCTCCCCCACGAGCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LVCRGNPKNCLV*HLTLPPPRAKE
Trigger: CTCCTTCGCTCGTGGGGGAGGTAGGGTGAGGTGGCAAACCAGGCAGTTTTTCGGATTTCCTCTACAAACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421319.5
CDS CCA 72 bp CCCTTCTTGTTTGTAGAGGAAATCCGAAAAACTGCCTaGTTTGCCACCTCACCCTACCTCCCCCACGAGCGA +
Preference number: 6 (lower is better)
Translates to: PFLFVEEIRKTA*FATSPYLPHER
Trigger: TCGCTCGTGGGGGAGGTAGGGTGAGGTGGCAAACCAGGCAGTTTTTCGGATTTCCTCTACAAACAAGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421319.5
CDS GCA 72 bp TTCTCCCTTCTTGTTTGTAGAGGAAATCCGAAAAACTaGCTGGTTTGCCACCTCACCCTACCTCCCCCACGA +
Preference number: 6 (lower is better)
Translates to: FSLLVCRGNPKN*LVCHLTLPPPR
Trigger: TCGTGGGGGAGGTAGGGTGAGGTGGCAAACCAGGCAGTTTTTCGGATTTCCTCTACAAACAAGAAGGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421319.5
CDS CAA 90 bp TCCACACCACAGAATCTGAAGATACATCTTGGACAAGTACCAGTATaGAGCAACAACTGGGCCACATGCTTGTTTTCCTCAGTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: STPQNLKIHLGQVPV*SNNWATCLFSSVSG
Trigger: CCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATGTATCTTCAGATTCTGTGGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316752.11
ENST00000398658.2
ENST00000407787.5
ENST00000421319.5
ENST00000430495.5
ENST00000602599.1
CDS CAA 90 bp ATGTGCTCCATGGATGTCCACATCATGCCAGGAAAACCATACTCTTaGTCTCCAAATTTGAAAGCTAGTCATCCAGAGCAGGTGGCCAGT +
Preference number: 6 (lower is better)
Translates to: MCSMDVHIMPGKPYS*SPNLKASHPEQVAS
Trigger: ACTGGCCACCTGCTCTGGATGACTAGCTTTCAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCATGGAGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS TCA 72 bp CAAGCTCTTTCCATCAATGGGAACACCCAGTTCCTCTaGAAACAGGGGGTGAGTTATCCATTTGTAGGCTTC +
Preference number: 6 (lower is better)
Translates to: QALSINGNTQFL*KQGVSYPFVGF
Trigger: GAAGCCTACAAATGGATAACTCACCCCCTGTTTTCAGAGGAACTGGGTGTTCCCATTGATGGAAAGAGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS TCA 72 bp GCAGCTAGGAAGTGGCAATCCTCAACTGTTTCTGGGTaGGCAAAGACCACACTCACTTCAAACAAGCTCTTT +
Preference number: 6 (lower is better)
Translates to: AARKWQSSTVSG*AKTTLTSNKLF
Trigger: AAAGAGCTTGTTTGAAGTGAGTGTGGTCTTTGCTCACCCAGAAACAGTTGAGGATTGCCACTTCCTAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000407787.5
CDS CCA 72 bp GACAGAATGGCTTCTCTATCTTTAAAGCGTAGACTTTaGTCTGTAGCAGTTGAGAGCGGCATTTGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: DRMASLSLKRRL*SVAVESGICPA
Trigger: GGCTGGACAAATGCCGCTCTCAACTGCTACAGACCAAAGTCTACGCTTTAAAGATAGAGAAGCCATTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000602599.1
CDS CCA 72 bp AATGTCTGCAGTCACATTCATCAGGGACCCAATGTTTaGCTTGGTTCTCCCGAAGTCTCCATGTACAAACTC +
Preference number: 6 (lower is better)
Translates to: NVCSHIHQGPNV*LGSPEVSMYKL
Trigger: GAGTTTGTACATGGAGACTTCGGGAGAACCAAGCCAAACATTGGGTCCCTGATGAATGTGACTGCAGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS CCA 72 bp GGCAACTTACAGGAAGTGGCAATCCTCAACTGTTTCTaGGTGAGCAAAGACCACACTCACTTCAAACAAGCT +
Preference number: 6 (lower is better)
Translates to: GNLQEVAILNCF*VSKDHTHFKQA
Trigger: AGCTTGTTTGAAGTGAGTGTGGTCTTTGCTCACCCAGAAACAGTTGAGGATTGCCACTTCCTGTAAGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS TCA 72 bp CAATACCTTTCCATCAATGGGAACACCCAGTTCCTCTaGAAACAGGGGGTGAGTTATCCATTTGTAGGCTTC +
Preference number: 6 (lower is better)
Translates to: QYLSINGNTQFL*KQGVSYPFVGF
Trigger: GAAGCCTACAAATGGATAACTCACCCCCTGTTTTCAGAGGAACTGGGTGTTCCCATTGATGGAAAGGTATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS TCA 72 bp AAGATGACCTTCCTGTTTTCACACCTGGAAGCCTGTTaGGTCTTCCCTGAAAGTCAACCCATTTCAGAGACT +
Preference number: 6 (lower is better)
Translates to: KMTFLFSHLEAC*VFPESQPISET
Trigger: AGTCTCTGAAATGGGTTGACTTTCAGGGAAGACTCAACAGGCTTCCAGGTGTGAAAACAGGAAGGTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS GCA 72 bp AACATCTACAGACTCAACATCCAGCTCCAGAATGTCTaGAGTCACATTCATCAGGGACCCAATGTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: NIYRLNIQLQNV*SHIHQGPNVWL
Trigger: AAGCCAAACATTGGGTCCCTGATGAATGTGACTGCAGACATTCTGGAGCTGGATGTTGAGTCTGTAGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS CAA 72 bp TCTGCAGTCACATTCATCAGGGACCCAATGTTTGGCTaGGTTCTCCCGAAGTCTCCATGTACAAACTCTTTA +
Preference number: 6 (lower is better)
Translates to: SAVTFIRDPMFG*VLPKSPCTNSL
Trigger: TAAAGAGTTTGTACATGGAGACTTCGGGAGAACCAAGCCAAACATTGGGTCCCTGATGAATGTGACTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS CAA 72 bp GCCACATGCTTGTTTTCCTCAGTCAGTGGGAACATATaGAATAATTATAACCGCCTCACCTTCTCCCCAGAC +
Preference number: 6 (lower is better)
Translates to: ATCLFSSVSGNI*NNYNRLTFSPD
Trigger: GTCTGGGGAGAAGGTGAGGCGGTTATAATTATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398658.2
ENST00000407787.5
CDS CAA 72 bp GCCACATGCTTGTTTTCCTCAGTCAGTGGGAACATATaGAATAATTATAACTACCCGCCTCACCTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: ATCLFSSVSGNI*NNYNYPPHLLP
Trigger: GGGGAGAAGGTGAGGCGGGTAGTTATAATTATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS GCA 72 bp GGACAAGTACCAGTATTGAGCAACAACTGGGCCACATaGTTGTTTTCCTCAGTCAGTGGGAACATATTGAAT +
Preference number: 6 (lower is better)
Translates to: GQVPVLSNNWAT*LFSSVSGNILN
Trigger: ATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316752.11
ENST00000398658.2
ENST00000407787.5
ENST00000421319.5
ENST00000430495.5
ENST00000602599.1
CDS CAA 72 bp CAAAGGCAGTTACTGCCTAAAAGTAAACAGGGGGATTaGAGATACCAACAAGGTAGGATTGAGCCCATACTC +
Preference number: 6 (lower is better)
Translates to: QRQLLPKSKQGD*RYQQGRIEPIL
Trigger: GAGTATGGGCTCAATCCTACCTTGTTGGTATCTCAAATCCCCCTGTTTACTTTTAGGCAGTAACTGCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS CAA 72 bp CAGAATCTGAAGATACATCTTGGACAAGTACCAGTATaGAGCAACAACTGGGCCACATGCTTGTTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: QNLKIHLGQVPV*SNNWATCLFSS
Trigger: TGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATGTATCTTCAGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316752.11
ENST00000398658.2
ENST00000407787.5
ENST00000421319.5
ENST00000430495.5
ENST00000602599.1
CDS CAA 72 bp ATGGATGTCCACATCATGCCAGGAAAACCATACTCTTaGTCTCCAAATTTGAAAGCTAGTCATCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: MDVHIMPGKPYS*SPNLKASHPEQ
Trigger: CTGCTCTGGATGACTAGCTTTCAAATTTGGAGACAAAGAGTATGGTTTTCCTGGCATGATGTGGACATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS CAA 90 bp CATCTTGGACAAGTACCAGTATTGAGCAACAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGGAACATATTGAATAATTATAACCGC +
Preference number: 6 (lower is better)
Translates to: HLGQVPVLSNNWATC*FSSVSGNILNNYNR
Trigger: GCGGTTATAATTATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398658.2
ENST00000407787.5
CDS CAA 72 bp CAAGTACCAGTATTGAGCAACAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGGAACATATTGAATAAT +
Preference number: 6 (lower is better)
Translates to: QVPVLSNNWATC*FSSVSGNILNN
Trigger: ATTATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316752.11
ENST00000398658.2
ENST00000407787.5
ENST00000421319.5
ENST00000430495.5
ENST00000602599.1
CDS CAA 72 bp CAAATCCTAGCTTGCTCACTTAATAGCTGTGTAACTTaGGGCAGGTTGCTTAACCTCTCTGTATCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: QILACSLNSCVT*GRLLNLSVSQF
Trigger: AAACTGAGATACAGAGAGGTTAAGCAACCTGCCCAAAGTTACACAGCTATTAAGTGAGCAAGCTAGGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398658.2
ENST00000430495.5
CDS CAA 90 bp CATCTTGGACAAGTACCAGTATTGAGCAACAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGGAACATATTGAATAATTATAACAGT +
Preference number: 6 (lower is better)
Translates to: HLGQVPVLSNNWATC*FSSVSGNILNNYNS
Trigger: ACTGTTATAATTATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316752.11
ENST00000602599.1
CDS CAA 90 bp CATCTTGGACAAGTACCAGTATTGAGCAACAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGGAACATATTGAATAATTATAACTAC +
Preference number: 6 (lower is better)
Translates to: HLGQVPVLSNNWATC*FSSVSGNILNNYNY
Trigger: GTAGTTATAATTATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430495.5
CDS TCA 72 bp AGTTCCTTAATTTCTTGTGAAGTGAAATGTACTCTATaGGGATTCACCAGCTCAATTGCAAAGGGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: SSLISCEVKCTL*GFTSSIAKGLP
Trigger: TGGAAGGCCCTTTGCAATTGAGCTGGTGAATCCTCATAGAGTACATTTCACTTCACAAGAAATTAAGGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS CCA 72 bp TGCCATTCTAGTGAATACAGACTGTTTGTTTTTGGCTaGCTTAAAACAATCTGGGCATATCGCAGCTCTAAA +
Preference number: 6 (lower is better)
Translates to: CHSSEYRLFVFG*LKTIWAYRSSK
Trigger: TTTAGAGCTGCGATATGCCCAGATTGTTTTAAGCCAGCCAAAAACAAACAGTCTGTATTCACTAGAATGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS CAA 72 bp GCAGACAAAATGAGTCCCTGTATGAGCTATATCGGTTaGCCCAGGAACTATGTTCAAGGACACATTTTATTT +
Preference number: 6 (lower is better)
Translates to: ADKMSPCMSYIG*PRNYVQGHILF
Trigger: AAATAAAATGTGTCCTTGAACATAGTTCCTGGGCAAACCGATATAGCTCATACAGGGACTCATTTTGTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS CAA 90 bp CATCTTGGACAAGTACCAGTATTGAGCAACAACTGGGCCACATGCTaGTTTTCCTCAGTCAGTGGGAACATATTGAATAATTATAACTAT +
Preference number: 6 (lower is better)
Translates to: HLGQVPVLSNNWATC*FSSVSGNILNNYNY
Trigger: ATAGTTATAATTATTCAATATGTTCCCACTGACTGAGGAAAACAAGCATGTGGCCCAGTTGTTGCTCAATACTGGTACTTGTCCAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421319.5
CDS TCA 72 bp TCAAATCCATGTCTTCTAGTTCCAAATCCTAGGTTTTaGATTCAGTCAGACTGTTCAAATCCTAGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: SNPCLLVPNPRF*IQSDCSNPSLL
Trigger: GAGCAAGCTAGGATTTGAACAGTCTGACTGAATTCAAAACCTAGGATTTGGAACTAGAAGACATGGATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398658.2
ENST00000430495.5
CDS CAA 90 bp TCTTCTGTATCGCTTTATTTGTCCAAATTAAGGCACTGTAGGTCTTaGTCTTTTCTTCTTCACCTTCTTTCATATGTCCTATTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: SSVSLYLSKLRHCRS*SFLLHLLSYVLLPL
Trigger: GAGAGGCAATAGGACATATGAAAGAAGGTGAAGAAGAAAAGACAAAGACCTACAGTGCCTTAATTTGGACAAATAAAGCGATACAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1
CDS CCA 72 bp AGCATTAACAATTTTACACCATTGACGTTGTTTACATaGCAACTTACAGGAAGTGGCAATCCTCAACTGTTT +
Preference number: 6 (lower is better)
Translates to: SINNFTPLTLFT*QLTGSGNPQLF
Trigger: AAACAGTTGAGGATTGCCACTTCCTGTAAGTTGCCATGTAAACAACGTCAATGGTGTAAAATTGTTAATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS CAA 90 bp AATAGTCCAGAGTTGACTCTATATTTGCTTGCAGTTATTTATATGTaGCTTTGCATCAAGTCTGATGCTTTGCATCAAGGCAAAGATTCA +
Preference number: 6 (lower is better)
Translates to: NSPELTLYLLAVIYM*LCIKSDALHQGKDS
Trigger: TGAATCTTTGCCTTGATGCAAAGCATCAGACTTGATGCAAAGCAACATATAAATAACTGCAAGCAAATATAGAGTCAACTCTGGACTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602599.1
CDS TCA 72 bp GTTATTAATTTTCTGCTGAAGTTCCTTAATTTCTTGTaGAGTGAAATGTACTCTATGAGGATTCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: VINFLLKFLNFL*SEMYSMRIHQL
Trigger: GAGCTGGTGAATCCTCATAGAGTACATTTCACTTCACAAGAAATTAAGGAACTTCAGCAGAAAATTAATAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316752.11
ENST00000407787.5
ENST00000602599.1