RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PUS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000177192

Ensembl transcript IDs: ENST00000322060.9, ENST00000376649.8, ENST00000443358.6, ENST00000456665.6, ENST00000535067.5, ENST00000537484.1, ENST00000538037.5, ENST00000542167.2, ENST00000543754.1, ENST00000544213.5, ENST00000544662.1

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGTCACGTGCGCCCACGGGCTGCAGGCTGGGAGGCCACGTGTATaGACGGCACTTCCTCCGCTGAGCCCCTCCCTGGGCTCCTGGCAG +
Preference number: 1 (lower is better)
Translates to: LVTCAHGLQAGRPRV*TALPPLSPSLGSWQ
Trigger: CTGCCAGGAGCCCAGGGAGGGGCTCAGCGGAGGAAGTGCCGTGCATACACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp GTTGTGTGCACCGCTGGGGCATCAGGCACTCGTGCATTGGTCACGTaGGCCCACGGGCTGCAGGCTGGGAGGCCACGTGTATGCACGGCA +
Preference number: 1 (lower is better)
Translates to: VVCTAGASGTRALVT*AHGLQAGRPRVCTA
Trigger: TGCCGTGCATACACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp CGCATGCGCATTAGTTGTGTGCACCGCTGGGGCATCAGGCACTCGTaGATTGGTCACGTGCGCCCACGGGCTGCAGGCTGGGAGGCCACG +
Preference number: 1 (lower is better)
Translates to: RMRISCVHRWGIRHS*IGHVRPRAAGWEAT
Trigger: CGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAACTAATGCGCATGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 90 bp ATCAGGCACTCGTGCATTGGTCACGTGCGCCCACGGGCTGCAGGCTaGGAGGCCACGTGTATGCACGGCACTTCCTCCGCTGAGCCCCTC +
Preference number: 1 (lower is better)
Translates to: IRHSCIGHVRPRAAG*EATCMHGTSSAEPL
Trigger: GAGGGGCTCAGCGGAGGAAGTGCCGTGCATACACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp CCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACGTaGACATGTCACTCACGCACTGCTGGGGCGACAGGCGACTGCGCA +
Preference number: 1 (lower is better)
Translates to: PAPLLTHGVHRIMGT*TCHSRTAGATGDCA
Trigger: TGCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGACATGTGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 90 bp CCACCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATaGGCACGTGCACATGTCACTCACGCACTGCTGGGGCGACAGGCG +
Preference number: 1 (lower is better)
Translates to: PPVLPHFSHTVSTAS*ARAHVTHALLGRQA
Trigger: CGCCTGTCGCCCCAGCAGTGCGTGAGTGACATGTGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp CGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTaGCCACAGGGGTGGCACATCTGGGCACACACTGTGAGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: RHGRENMAAAIPASC*PQGWHIWAHTVSCS
Trigger: TGAGCAGCTCACAGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR CCA 90 bp CATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCTaGGGCATCAGGCACTCGTGCATTGGTCACGTGCGCCCACGGGCT +
Preference number: 1 (lower is better)
Translates to: HCWHVRRMRISCVHR*GIRHSCIGHVRPRA
Trigger: AGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTaGAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCACATCTG +
Preference number: 1 (lower is better)
Translates to: EGPEVTTPAWPGKHG*SDPSFLLPTGVAHL
Trigger: CAGATGTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR GCA 90 bp GGCACGTGCACATGTCACTCACGCACTGCTGGGGCGACAGGCGACTaGGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCA +
Preference number: 1 (lower is better)
Translates to: GTCTCHSRTAGATGD*ALVTCIVGTSGACA
Trigger: TGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGACATGTGCACGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 90 bp CTCCCTGGGCTCCTGGCAGCCCGCCAGCCAAGGATCCCCTGCTCCTaGCTAACGCAGTGTGTTTTGTTCCACGCTAAGCGCCACTTCAAA +
Preference number: 1 (lower is better)
Translates to: LPGLLAARQPRIPCS*LTQCVLFHAKRHFK
Trigger: TTTGAAGTGGCGCTTAGCGTGGAACAAAACACACTGCGTTAGCCAGGAGCAGGGGATCCTTGGCTGGCGGGCTGCCAGGAGCCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 90 bp CACTGCTGGGGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTaGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: HCWGDRRLRISHMHC*HVRRMRISCVHRWG
Trigger: GCCCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp GTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTaGACCGCTGGGGCATCAGGCACTCGTGCATTGGTCACGTGCGCC +
Preference number: 1 (lower is better)
Translates to: VTCIVGTSGACALVV*TAGASGTRALVTCA
Trigger: GGCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp CGGTGTCCACCGCATCATGGGCACGTGCACATGTCACTCACGCACTaGTGGGGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTGG +
Preference number: 1 (lower is better)
Translates to: RCPPHHGHVHMSLTH*WGDRRLRISHMHCW
Trigger: CCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGACATGTGCACGTGCCCATGATGCGGTGGACACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp AAACCAGCTCCACTCTCTTGGGCACCCCACGCCCTAGGAGCTCACTaGCTGAAGCATCTCCCAATCCCACCTGTCCTGCCCCACTTCTCA +
Preference number: 1 (lower is better)
Translates to: KPAPLSWAPHALGAH*LKHLPIPPVLPHFS
Trigger: TGAGAAGTGGGGCAGGACAGGTGGGATTGGGAGATGCTTCAGGCAGTGAGCTCCTAGGGCGTGGGGTGCCCAAGAGAGTGGAGCTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 90 bp GAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTaGCACATCTGGGCACACACTGTGAGCTGCTCAGAGGCACTCTGG +
Preference number: 1 (lower is better)
Translates to: ENMAAAIPASCCPQG*HIWAHTVSCSEALW
Trigger: CCAGAGTGCCTCTGAGCAGCTCACAGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR GCA 90 bp TCCACGCTAAGCGCCACTTCAAAAGCAGTCTTCCCCAGCCTCCCTTaGAGCTACGAAGGGCCGCTGGATGCACCTGTGACCAATGACGTG +
Preference number: 1 (lower is better)
Translates to: STLSATSKAVFPSLP*SYEGPLDAPVTNDV
Trigger: CACGTCATTGGTCACAGGTGCATCCAGCGGCCCTTCGTAGCTGCAAGGGAGGCTGGGGAAGACTGCTTTTGAAGTGGCGCTTAGCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp GGCGACTGCGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATaGGCATTAGTTGTGTGCACCGCTGGGGCATCAGGCACTCGTGCA +
Preference number: 1 (lower is better)
Translates to: GDCALVTCIVGTSGA*ALVVCTAGASGTRA
Trigger: TGCACGAGTGCCTGATGCCCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 90 bp CACTCACGCACTGCTGGGGCGACAGGCGACTGCGCATTAGTCACATaGATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACC +
Preference number: 1 (lower is better)
Translates to: HSRTAGATGDCALVT*IVGTSGACALVVCT
Trigger: GGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATaGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCC +
Preference number: 1 (lower is better)
Translates to: KAVPTREGPEVTTPA*PGKHGCSDPSFLLP
Trigger: GGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR CCA 90 bp TGTCCACCGCATCATGGGCACGTGCACATGTCACTCACGCACTGCTaGGGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCAC +
Preference number: 1 (lower is better)
Translates to: CPPHHGHVHMSLTHC*GDRRLRISHMHCWH
Trigger: GTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGACATGTGCACGTGCCCATGATGCGGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR TCA 90 bp GCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTaGGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGA +
Preference number: 1 (lower is better)
Translates to: AENRFEKGCSYKGRS*GYNAGMAGKTWLQR
Trigger: TCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR CAA 90 bp TGCGCATTAGTTGTGTGCACCGCTGGGGCATCAGGCACTCGTGCATaGGTCACGTGCGCCCACGGGCTGCAGGCTGGGAGGCCACGTGTA +
Preference number: 2 (lower is better)
Translates to: CALVVCTAGASGTRA*VTCAHGLQAGRPRV
Trigger: TACACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAACTAATGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR TCA 90 bp GACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCCGGCACTTCCTCCGCTaGGCCCCTCCCTGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: DRRLRISHMHCWHVRRMRRHFLR*APPWAP
Trigger: AGGAGCCCAGGGAGGGGCTCAGCGGAGGAAGTGCCG...GCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR TCA 90 bp CCAGCTCATCCATCCCTCAAACCCAAAGCCCAGTGGGCCTCACACCTGCACTCCTGGCTCCCGAAGCAGTaGGCCCCACTGCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: PAHPSLKPKAQWASHLHSWLPKQ*APLLLW
Trigger: CCAGAGGAGCAGTGGGGCTCACTGCTTCGGGAGCCA...GGAGTGCAGGTGTGAGGCCCACTGGGCTTTGGGTTTGAGGGATGGATGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR GCA 90 bp ACGCACTGCTGGGGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACAGAGGAGCCCGTGGCTaGCACCCCTCTCGGGGATGC +
Preference number: 2 (lower is better)
Translates to: THCWGDRRLRISHMHCWHRGARG*HPSRGC
Trigger: GCATCCCCGAGAGGGGTGGCAGCCACGGGCTCCTCT...GTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR CCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGTGCTCAGAGGCACTCTaGTGGGCAGCTCCCATCGCC +
Preference number: 2 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVCSEAL*WAAPIA
Trigger: GGCGATGGGAGCTGCCCACCAGAGTGCCTCTGAGCA...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp CGGGACAGTGCTGAGGCGAGTACCGACCTGCAACCAGGGCAAAGGCTGCACGCATGCTGCCCACAGGGGTaGCACATCTGGGCACACACT +
Preference number: 2 (lower is better)
Translates to: RDSAEASTDLQPGQRLHACCPQG*HIWAHT
Trigger: AGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCA...TGCGTGCAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR TCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCTCTGGGCACACACTGTaGGCTGCTCAGAGGCACTCT +
Preference number: 2 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAASGHTL*AAQRHS
Trigger: AGAGTGCCTCTGAGCAGCTCACAGTGTGTGCCCAGA...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR GCA 90 bp ACGCACTGCTGGGGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGCGATCCCAGCTTCTTaGTGCCCACAGGGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: THCWGDRRLRISHMHCWHAIPAS*CPQGWH
Trigger: GTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGC...GTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR GCA 90 bp GGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCGATGCACCCTTTCCTTCTGCCTCGGGACCACCCTaGAGAGTGCAGGATGCTGGG +
Preference number: 2 (lower is better)
Translates to: GLPVSSTKGLFRDAPFPSASGPP*RVQDAG
Trigger: CCCAGCATCCTGCACTCTGCAGGGTGGTCCCGAGGC...AGAAGGAAAGGGTGCATCGCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR CCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGATGCTGCCCACAGGGGTaGCACATCTGGGCACACACT +
Preference number: 2 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGCCPQG*HIWAHT
Trigger: AGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCA...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR TCA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAATCTGGGCACACACTGTaGGCTGCTCAGAGGCACTCT +
Preference number: 2 (lower is better)
Translates to: RLFLQGKVLRLQRRHGRESGHTL*AAQRHS
Trigger: AGAGTGCCTCTGAGCAGCTCACAGTGTGTGCCCAGA...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR TCA 90 bp CCAGCTCATCCATCCCTCAAACCCAAAGCCCAGTGGGCCTCACACCTGCACTCCTACAAGGGAAGGTCCTaGGGTTACAACGCCGGCATG +
Preference number: 2 (lower is better)
Translates to: PAHPSLKPKAQWASHLHSYKGRS*GYNAGM
Trigger: CATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTA...GGAGTGCAGGTGTGAGGCCCACTGGGCTTTGGGTTTGAGGGATGGATGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR CCA 90 bp AGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCCAGGGGTGGCACATCTaGGCACACACTGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: SHMHCWHVRRMRISCVHRQGWHI*AHTVSC
Trigger: GCAGCTCACAGTGTGTGCCCAGATGTGCCACCCCTG...GCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR CCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATTGCTGCCCACAGGGGTaGCACATCTGGGCACACACT +
Preference number: 2 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHCCPQG*HIWAHT
Trigger: AGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCA...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR TCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATTCTGGGCACACACTGTaGGCTGCTCAGAGGCACTCT +
Preference number: 2 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHSGHTL*AAQRHS
Trigger: AGAGTGCCTCTGAGCAGCTCACAGTGTGTGCCCAGA...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR TCA 90 bp TCTCCAAACCCATTCCTTTCCCTGTCTCCCGTTCCAGTTAACGGCCCAGCTCATCGCTGGATGCACCTGTaGCCAATGACGTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SPNPFLSLSPVPVNGPAHRWMHL*PMTCSS
Trigger: GCTGCTGCACGTCATTGGTCACAGGTGCATCCAGCG...ATGAGCTGGGCCGTTAACTGGAACGGGAGACAGGGAAAGGAATGGGTTTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR GCA 90 bp GGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCGATGCACCCTTTCCTTCTATCCCAGCTTCTTGCTaGCCACAGGGGTGGCACATC +
Preference number: 2 (lower is better)
Translates to: GLPVSSTKGLFRDAPFPSIPASC*PQGWHI
Trigger: GATGTGCCACCCCTGTGGGCAGCAAGAAGCTGGGAT...AGAAGGAAAGGGTGCATCGCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR GCA 90 bp AGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTGCACACACTGTGAGCTaGTCAGAGGCACTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: RACRHAQLIFCRDAVSPFAHTVS*SEALWW
Trigger: CCACCAGAGTGCCTCTGAGCAGCTCACAGTGTGTGC...AAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR GCA 90 bp ATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACGGGAGGCCACGTGTATaGACGGCACTTCCTCCGCTG +
Preference number: 2 (lower is better)
Translates to: ISHMHCWHVRRMRISCVHGRPRV*TALPPL
Trigger: CAGCGGAGGAAGTGCCGTGCATACACGTGGCCTCCC...GTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR CCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGTGCTCAGAGGCACTCTaGTGGGCAGCTCCCATCGCC +
Preference number: 2 (lower is better)
Translates to: QELKTDSRKAVPTREGPECSEAL*WAAPIA
Trigger: GGCGATGGGAGCTGCCCACCAGAGTGCCTCTGAGCA...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR TCA 90 bp TGGCACCGGGACAGTGCTGAGGCGAGTACCGACCTGCAACCAGGGCAAAGGCTGAGGCAAACCAAGGATTaGCTAAGCAAAATTTGTACT +
Preference number: 2 (lower is better)
Translates to: WHRDSAEASTDLQPGQRLRQTKD*LSKICT
Trigger: AGTACAAATTTTGCTTAGTCAATCCTTGGTTTGCCT...CAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCGGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR GCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCGCGATCCCAGCTTCTTaGTGCCCACAGGGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: NARAENRFEKGCSYKGRSAIPAS*CPQGWH
Trigger: GTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGC...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR GCA 90 bp CCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTTACCCAGGCTCAACGGGACACCATaGTGTGCTCATCTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: PPCPANLLQRRGFTILPRLNGTP*CAHLCG
Trigger: TCCACAGAGATGAGCACAGCATGGTGTCCCGTTGAG...CCTGGGTAAAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR CCA 90 bp CCTCCTGGGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATATGGCCGGGAAAACATaGCTGCAGCGATCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: PPGPFSFVQPYLFSTGHHMAGKT*LQRSQL
Trigger: AAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT...ATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR GCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGCACACACTGTGAGCTaGTCAGAGGCACTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: QELKTDSRKAVPTREGPEAHTVS*SEALWW
Trigger: CCACCAGAGTGCCTCTGAGCAGCTCACAGTGTGTGC...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGTGCTGCCCACAGGGGTaGCACATCTGGGCACACACT +
Preference number: 2 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTCCPQG*HIWAHT
Trigger: AGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCA...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp AGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTGCTGAGCCAACCTCCTaGGCCTTTCTCTTTTGTTCA +
Preference number: 2 (lower is better)
Translates to: RACRHAQLIFCRDAVSPFAEPTS*AFLFCS
Trigger: TGAACAAAAGAGAAAGGCCCAGGAGGTTGGCTCAGC...AAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR-3UTR GCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGGCACACACTGTGAGCTaGTCAGAGGCACTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTAHTVS*SEALWW
Trigger: CCACCAGAGTGCCTCTGAGCAGCTCACAGTGTGTGC...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCGTTACAACGCCGGCATaGCCGGGAAAACATGGCTGC +
Preference number: 2 (lower is better)
Translates to: NARAENRFEKGCSYKGRSVTTPA*PGKHGC
Trigger: GCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAAC...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR GCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCCCGGGAAAACATGGCTaGAGCGATCCCAGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: NARAENRFEKGCSYKGRSPGKHG*SDPSFL
Trigger: CAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR GCA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCCCGGGAAAACATGGCTaGAGCGATCCCAGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: EVHLCNARAENRFEKGCSPGKHG*SDPSFL
Trigger: CAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTGTTACAACGCCGGCATaGCCGGGAAAACATGGCTGC +
Preference number: 2 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVVTTPA*PGKHGC
Trigger: GCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAAC...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTGCTCAGAGGCACTCTaGTGGGCAGCTCCCATCGCC +
Preference number: 2 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDCSEAL*WAAPIA
Trigger: GGCGATGGGAGCTGCCCACCAGAGTGCCTCTGAGCA...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTATGGCCGGGAAAACATaGCTGCAGCGATCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVMAGKT*LQRSQL
Trigger: AAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp TCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGGTTACAACGCCGGCATaGCCGGGAAAACATGGCTGC +
Preference number: 2 (lower is better)
Translates to: SLHAEVHLCNARAENRFEVTTPA*PGKHGC
Trigger: GCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAAC...CTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACATGCTCAGAGGCACTCTaGTGGGCAGCTCCCATCGCC +
Preference number: 2 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTCSEAL*WAAPIA
Trigger: GGCGATGGGAGCTGCCCACCAGAGTGCCTCTGAGCA...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR TCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCTGGGCACACACTGTaGGCTGCTCAGAGGCACTCT +
Preference number: 2 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDSGHTL*AAQRHS
Trigger: AGAGTGCCTCTGAGCAGCTCACAGTGTGTGCCCAGA...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR GCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATGCACACACTGTGAGCTaGTCAGAGGCACTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDAHTVS*SEALWW
Trigger: CCACCAGAGTGCCTCTGAGCAGCTCACAGTGTGTGC...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR GCA 72 bp TGCGCCCACGGGCTGCAGGCTGGGAGGCCACGTGTATaGACGGCACTTCCTCCGCTGAGCCCCTCCCTGGGC +
Preference number: 3 (lower is better)
Translates to: CAHGLQAGRPRV*TALPPLSPSLG
Trigger: GCCCAGGGAGGGGCTCAGCGGAGGAAGTGCCGTGCATACACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp ACCGCTGGGGCATCAGGCACTCGTGCATTGGTCACGTaGGCCCACGGGCTGCAGGCTGGGAGGCCACGTGTA +
Preference number: 3 (lower is better)
Translates to: TAGASGTRALVT*AHGLQAGRPRV
Trigger: TACACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp CCTGGCACCGGGACAGTGCTGAGGCGAGTACCGACCTaGAACCAGGGCAAAGGCTGCACGCATGGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: PGTGTVLRRVPT*NQGKGCTHGAV
Trigger: GACAGCCCCATGCGTGCAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCGGTGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp CAGGCACTCGTGCATTGGTCACGTGCGCCCACGGGCTaGAGGCTGGGAGGCCACGTGTATGCACGGCACTTC +
Preference number: 3 (lower is better)
Translates to: QALVHWSRAPTG*RLGGHVYARHF
Trigger: GAAGTGCCGTGCATACACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 72 bp TCGTGCATTGGTCACGTGCGCCCACGGGCTGCAGGCTaGGAGGCCACGTGTATGCACGGCACTTCCTCCGCT +
Preference number: 3 (lower is better)
Translates to: SCIGHVRPRAAG*EATCMHGTSSA
Trigger: AGCGGAGGAAGTGCCGTGCATACACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp ATTAGTTGTGTGCACCGCTGGGGCATCAGGCACTCGTaGATTGGTCACGTGCGCCCACGGGCTGCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: ISCVHRWGIRHS*IGHVRPRAAGW
Trigger: CCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAACTAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp CCACTCTCTTGGGCACCCCACGCCCTAGGAGCTCACTaGCTGAAGCATCTCCCAATCCCACCTGTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: PLSWAPHALGAH*LKHLPIPPVLP
Trigger: GGGCAGGACAGGTGGGATTGGGAGATGCTTCAGGCAGTGAGCTCCTAGGGCGTGGGGTGCCCAAGAGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 72 bp AGTACCGACCTGCAACCAGGGCAAAGGCTGCACGCATaGGGCTGTCTAGGAAGAGGAGCCCGTGGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: STDLQPGQRLHA*GCLGRGARGCH
Trigger: GTGGCAGCCACGGGCTCCTCTTCCTAGACAGCCCCATGCGTGCAGCCTTTGCCCTGGTTGCAGGTCGGTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR TCA 72 bp TCCCTTGCAGCTACGAAGGGCCGCTGGATGCACCTGTaGCCAATGACGTGCAGCAGCGGCTGGTGGGGTCTT +
Preference number: 3 (lower is better)
Translates to: SLAATKGRWMHL*PMTCSSGWWGL
Trigger: AAGACCCCACCAGCCGCTGCTGCACGTCATTGGTCACAGGTGCATCCAGCGGCCCTTCGTAGCTGCAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp CTTCTCACACACGGTGTCCACCGCATCATGGGCACGTaGACATGTCACTCACGCACTGCTGGGGCGACAGGC +
Preference number: 3 (lower is better)
Translates to: LLTHGVHRIMGT*TCHSRTAGATG
Trigger: GCCTGTCGCCCCAGCAGTGCGTGAGTGACATGTGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 72 bp CACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCTaGGGCATCAGGCACTCGTGCATTGGTCACGTGCGC +
Preference number: 3 (lower is better)
Translates to: HVRRMRISCVHR*GIRHSCIGHVR
Trigger: GCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 72 bp CTGCCCCACTTCTCACACACGGTGTCCACCGCATCATaGGCACGTGCACATGTCACTCACGCACTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: LPHFSHTVSTAS*ARAHVTHALLG
Trigger: CCCCAGCAGTGCGTGAGTGACATGTGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp CCGCATCATGGGCACGTGCACATGTCACTCACGCACTaGTGGGGCGACAGGCGACTGCGCATTAGTCACATG +
Preference number: 3 (lower is better)
Translates to: PHHGHVHMSLTH*WGDRRLRISHM
Trigger: CATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGACATGTGCACGTGCCCATGATGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp CCACCTCAGCCTCCTGAGCAGCTGAACTACAGGGCATaGCGCCATGCCCAGCTAATCTTTTGCAGAGACGCG +
Preference number: 3 (lower is better)
Translates to: PPQPPEQLNYRA*RHAQLIFCRDA
Trigger: CGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCTGTAGTTCAGCTGCTCAGGAGGCTGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 72 bp CCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATaGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTC +
Preference number: 3 (lower is better)
Translates to: PTREGPEVTTPA*PGKHGCSDPSF
Trigger: GAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CAA 90 bp TCTCCAAACCCATTCCTTTCCCTGTCTCCCGTTCCAGTTAACGGCCCAGCTCATTCAGGCACTCGTGCATaGGTCACGTGCGCCCACGGG +
Preference number: 3 (lower is better)
Translates to: SPNPFLSLSPVPVNGPAHSGTRA*VTCAHG
Trigger: CCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGA...ATGAGCTGGGCCGTTAACTGGAACGGGAGACAGGGAAAGGAATGGGTTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp ATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTaGACCGCTGGGGCATCAGGCACTCGTGCATTGGTC +
Preference number: 3 (lower is better)
Translates to: IVGTSGACALVV*TAGASGTRALV
Trigger: GACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp ACATGTCACTCACGCACTGCTGGGGCGACAGGCGACTaGGCATTAGTCACATGCATTGTTGGCACGTCAGGC +
Preference number: 3 (lower is better)
Translates to: TCHSRTAGATGD*ALVTCIVGTSG
Trigger: GCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 72 bp CATCATGGGCACGTGCACATGTCACTCACGCACTGCTaGGGCGACAGGCGACTGCGCATTAGTCACATGCAT +
Preference number: 3 (lower is better)
Translates to: HHGHVHMSLTHC*GDRRLRISHMH
Trigger: ATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGACATGTGCACGTGCCCATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp GCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATaGGCATTAGTTGTGTGCACCGCTGGGGCATCAGGC +
Preference number: 3 (lower is better)
Translates to: ALVTCIVGTSGA*ALVVCTAGASG
Trigger: GCCTGATGCCCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR GCA 72 bp ACTGCTGGGGCGACAGGCGACTGCGCATTAGTCACATaGATTGTTGGCACGTCAGGCGCATGCGCATTAGTT +
Preference number: 3 (lower is better)
Translates to: TAGATGDCALVT*IVGTSGACALV
Trigger: AACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CCA 72 bp GGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTaGCACGTCAGGCGCATGCGCATTAGTTGTGTGCAC +
Preference number: 3 (lower is better)
Translates to: GDRRLRISHMHC*HVRRMRISCVH
Trigger: GTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR TCA 72 bp AGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTaGGGTTACAACGCCGGCATGGCCGGGAAAACATGG +
Preference number: 3 (lower is better)
Translates to: RFEKGCSYKGRS*GYNAGMAGKTW
Trigger: CCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
3UTR-3UTR CAA 90 bp TCTCCAAACCCATTCCTTTCCCTGTCTCCCGTTCCAGTTAACGGCCCAGCTCATCTGGGCCTTTCTCTTTaGTTCAGCCGTATCTGTTCT +
Preference number: 3 (lower is better)
Translates to: SPNPFLSLSPVPVNGPAHLGLSL*FSRICS
Trigger: AGAACAGATACGGCTGAACAAAAGAGAAAGGCCCAG...ATGAGCTGGGCCGTTAACTGGAACGGGAGACAGGGAAAGGAATGGGTTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCCGCGTTCCCGGCCATaGGCGGCGAGCAGGACGGAC +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAAPRSRP*AASRTD
Trigger: GTCCGTCCTGCTCGCCGCGCATGGCCGGGAACGCGG...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCAGGACCTCCGGTCCTaGGGGCATGCGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAAQDLRS*GHAAPA
Trigger: CGCCGGAGCCGCATGCCCCCAGGACCGGAGGTCCTG...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
3UTR CAA 72 bp GTTGTGTGCACCGCTGGGGCATCAGGCACTCGTGCATaGGTCACGTGCGCCCACGGGCTGCAGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VVCTAGASGTRA*VTCAHGLQAGR
Trigger: CCTCCCAGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGATGCCCCAGCGGTGCACACAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGGCGCCCGTGCCACCTaGCGTGAGAGCGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVGARAT*RESGGT
Trigger: AGTGCCACCGCTCTCACGGCAGGTGGCACGGGCGCC...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp ATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGGGACTGGGCACCTTaGCGCCCGTGCCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: MAGKTWLQRSQLLAAHRGGDWAP*RPCHLP
Trigger: CGGCAGGTGGCACGGGCGCCAAGGTGCCCAGTCCCC...ACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCGCGACGCGGCTGACTaGGCCGGAGCCGGACCACGT +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDRDAAD*AGAGPR
Trigger: ACGTGGTCCGGCTCCGGCTCAGTCAGCCGCGTCGCG...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS-3UTR GCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGACGTGCGCCCACGGGCTaGAGGCTGGGAGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGRAPTG*RLGGHV
Trigger: CACGTGGCCTCCCAGCCTGCAGCCCGTGGGCGCACG...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCATCCCGCCCCGCCCGGTaGGCTTTCCTCAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVASRPAR*AFLRSR
Trigger: TCGACTCCTGAGGAAAGCCCACCGGGCGGGGCGGGA...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp TGGCACCGGGACAGTGCTGAGGCGAGTACCGACCTGCAACCAGGGCAAAGGCTGTCACTCACGCACTGCTaGGGCGACAGGCGACTGCGC +
Preference number: 4 (lower is better)
Translates to: WHRDSAEASTDLQPGQRLSLTHC*GDRRLR
Trigger: GCGCAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGA...CAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCGGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGACATTCGCGACGCGGCTaGCTGAGCCGGAGCCGGACC +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGHSRRG*LSRSRT
Trigger: GGTCCGGCTCCGGCTCAGTCAGCCGCGTCGCGAATG...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS-3UTR GCA 90 bp TGGCACCGGGACAGTGCTGAGGCGAGTACCGACCTGCAACCAGGGCAAAGGCTGCGTCCACCTTCTCTGTaGCCCAGCTGCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WHRDSAEASTDLQPGQRLRPPSL*PSCAPA
Trigger: TGCTGGAGCGCAGCTGGGGCACAGAGAAGGTGGACG...CAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCGGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAAGAGAGGCTCGCTCCTaGCCCATTCGCGACGCGGCT +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAREARS*PIRDAA
Trigger: AGCCGCGTCGCGAATGGGGCAGGAGCGAGCCTCTCT...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGAGAGAGGCTCGCTCCTaGCCCATTCGCGACGCGGCT +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVREARS*PIRDAA
Trigger: AGCCGCGTCGCGAATGGGGCAGGAGCGAGCCTCTCT...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATACCCCTGACCCCCAGTaGCCCAGCTCCGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDTPDPQ*PSSASA
Trigger: GGCAGAGGCGGAGCTGGGGCACTGGGGGTCAGGGGT...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp TGGCACCGGGACAGTGCTGAGGCGAGTACCGACCTGCAACCAGGGCAAAGGCTGTTCCCCAGCCTCCCTTaGAGCTACGAAGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: WHRDSAEASTDLQPGQRLFPSLP*SYEGPL
Trigger: CAGCGGCCCTTCGTAGCTGCAAGGGAGGCTGGGGAA...CAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAGCACGATCTTCCGCTTaGGCGGCTTCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAARSSA*AASRAA
Trigger: AGCGGCGCGAGAAGCCGCCCAAGCGGAAGATCGTGC...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR CCA 90 bp CTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACGGGGACTGGGCACCTTaGCGCCCGTGCCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: LFLQGKVLRLQRRHGRENGDWAP*RPCHLP
Trigger: CGGCAGGTGGCACGGGCGCCAAGGTGCCCAGTCCCC...GTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp CCAGCTCATCCATCCCTCAAACCCAAAGCCCAGTGGGCCTCACACCTGCACTCCAGGAAGAGGAGCCCGTaGCTGCCACCCCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PAHPSLKPKAQWASHLHSRKRSP*LPPLSG
Trigger: CCCCGAGAGGGGTGGCAGCCACGGGCTCCTCTTCCT...GGAGTGCAGGTGTGAGGCCCACTGGGCTTTGGGTTTGAGGGATGGATGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGCAACCCCCACCTGCCTaGCACCGGGACAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVQPPPA*HRDSAE
Trigger: CTCAGCACTGTCCCGGTGCCAGGCAGGTGGGGGTTG...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp ATCCCACCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCAGTTCCTTCTGACCCCTaGCCTCCGGGAAACCGGCGC +
Preference number: 4 (lower is better)
Translates to: IPPVLPHFSHTVSTASWAVPSDP*PPGNRR
Trigger: GCGCCGGTTTCCCGGAGGTCAGGGGTCAGAAGGAAC...TGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGGTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp GCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGAGGAGCCTGTTGACCTaGTGCAGCGTCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: AWPGKHGCSDPSFLLPTGRSLLT*CSVSAL
Trigger: GAGCGCCGAGACGCTGCAGCAGGTCAACAGGCTCCT...CCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGCTCCGTCCCCTTCACTaGCTTCCAGGGGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: AWPGKHGCSDPSFLLPTGLRPLH*LPGDWA
Trigger: TGCCCAGTCCCCTGGAAGGCAGTGAAGGGGACGGAG...CCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCGATCCCAGCTTCTTaGTGCCCACAGGGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVAIPAS*CPQGWH
Trigger: GTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGC...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp TGCAGCAGCGGCTGGTGGGGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCTTCAGGGATACCACCTaGCCGGCTGCGGACACACCC +
Preference number: 4 (lower is better)
Translates to: CSSGWWGLPVSSTKGLFRFRDTT*PAADTP
Trigger: GGGTGTGTCCGCAGCCGGCCAGGTGGTATCCCTGAA...GCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACCCCACCAGCCGCTGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCATGTAGCGGCAGGCACTaGGATCCTGCGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVACSGRH*DPAAPS
Trigger: AGAAGGGGCCGCAGGATCCCAGTGCCTGCCGCTACA...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp GACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCTCCCGCCCCGCCCGGTaGGCTTTCCTCAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: DRRLRISHMHCWHVRRMRSRPAR*AFLRSR
Trigger: TCGACTCCTGAGGAAAGCCCACCGGGCGGGGCGGGA...GCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAATCCCGCCCCGCCCGGTaGGCTTTCCTCAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: RLFLQGKVLRLQRRHGRESRPAR*AFLRSR
Trigger: TCGACTCCTGAGGAAAGCCCACCGGGCGGGGCGGGA...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGGGGACTGGGCACCTTaGCGCCCGTGCCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMGDWAP*RPCHLP
Trigger: CGGCAGGTGGCACGGGCGCCAAGGTGCCCAGTCCCC...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGATGCCTTCCAGGGGACTaGGCACCTTGGCGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGCLPGD*APWRPC
Trigger: GCACGGGCGCCAAGGTGCCCAGTCCCCTGGAAGGCA...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp CGGGACAGTGCTGAGGCGAGTACCGACCTGCAACCAGGGCAAAGGCTGCACGCAACGTGCAGCAGCGGCTaGTGGGGTCTTCCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: RDSAEASTDLQPGQRLHATCSSG*WGLPVS
Trigger: GCTTACTGGAAGACCCCACCAGCCGCTGCTGCACGT...TGCGTGCAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCTGCCTTCCAGGGGACTaGGCACCTTGTCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAACLPGD*APCLSG
Trigger: CCCGGACAGACAAGGTGCCCAGTCCCCTGGAAGGCA...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535067.5
CDS-3UTR TCA 90 bp CCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACGTGCATTCAGGAATACAGCCTaGCCGGACGAGGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: PVLPHFSHTVSTASWARAFRNTA*PDEGGH
Trigger: GTGTCCGCCCTCGTCCGGTCAGGCTGTATTCCTGAA...TGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAGGCCAGGAGCCTGTTaGCCTGCTGCAGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGRPGAC*PAAASR
Trigger: CCGAGACGCTGCAGCAGGTCAACAGGCTCCTGGCCT...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCTCTGGCCCTTCACCCTaGTCACCGCAAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAASGPSP*SPQTPG
Trigger: GCCTGGAGTTTGCGGTGATCAGGGTGAAGGGCCAGA...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGCAGCCCTGTTCCTTCTaGCCCCTGACCTCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVQPCSF*PLTSGK
Trigger: TTTCCCGGAGGTCAGGGGTCAGAAGGAACAGGGCTG...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp ATCCCACCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACCCACCTCAGCCTCCTaGGCAGCTGAACTACAGGGC +
Preference number: 4 (lower is better)
Translates to: IPPVLPHFSHTVSTASWAPTSAS*AAELQG
Trigger: GCCCTGTAGTTCAGCTGCTCAGGAGGCTGAGGTGGG...TGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGGTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCGCACCGGGACAGTGCTaGGGCGAGTACCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAIAPGQC*GEYRPA
Trigger: TGCAGGTCGGTACTCGCCTCAGCACTGTCCCGGTGC...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCTGGCTCCCGAAGCAGTaGGCCCCACTGCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAIWLPKQ*APLLLW
Trigger: CCAGAGGAGCAGTGGGGCTCACTGCTTCGGGAGCCA...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCTACCACCTGGCCGGCTaGGGACACACCCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAAYHLAG*GHTLVC
Trigger: ACAGACAAGGGTGTGTCCGCAGCCGGCCAGGTGGTA...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCAGGAGCCTGTTGACCTaGTGCAGCGTCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSRSLLT*CSVSAL
Trigger: GAGCGCCGAGACGCTGCAGCAGGTCAACAGGCTCCT...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCAGGCACTGGGATCCTaGGGCCCCTTCTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAIQALGS*GPFCEV
Trigger: CACCTCGCAGAAGGGGCCGCAGGATCCCAGTGCCTG...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCAGGCACTGGGATCCTaGGGCCCCTTCTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDQALGS*GPFCEV
Trigger: CACCTCGCAGAAGGGGCCGCAGGATCCCAGTGCCTG...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCTCTCTGTGCCCCAGCTaGGCTCCAGCACGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSSLCPS*APARSQ
Trigger: CTGAGAGCGTGCTGGAGCGCAGCTGGGGCACAGAGA...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp ATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTTCTCTGTGCCCCAGCTaGGCTCCAGCACGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: MAGKTWLQRSQLLAAHRGSLCPS*APARSQ
Trigger: CTGAGAGCGTGCTGGAGCGCAGCTGGGGCACAGAGA...ACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp TGCAGCAGCGGCTGGTGGGGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCACCTTTCCTTCCTCCTaGGCCCAGTCCAGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: CSSGWWGLPVSSTKGLFRTFPSS*AQSSGS
Trigger: TGAGCCGCTGGACTGGGCGCAGGAGGAAGGAAAGGT...GCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACCCCACCAGCCGCTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCCTCCGTCCCCTTCACTaGCTTCCAGGGGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSLRPLH*LPGDWA
Trigger: TGCCCAGTCCCCTGGAAGGCAGTGAAGGGGACGGAG...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGGGAGGCCACGTGTATaGACGGCACTTCCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSGRPRV*TALPPL
Trigger: CAGCGGAGGAAGTGCCGTGCATACACGTGGCCTCCC...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp ACGCACTGCTGGGGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGCACGATCTTCCGCTTaGGCGGCTTCTCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: THCWGDRRLRISHMHCWHARSSA*AASRAA
Trigger: AGCGGCGCGAGAAGCCGCCCAAGCGGAAGATCGTGC...GTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp GACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCCGAGTCCGGGCGCCTTaGGCACGTCCACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DRRLRISHMHCWHVRRMRRVRAP*ARPPSL
Trigger: CAGAGAAGGTGGACGTGCCCAAGGCGCCCGGACTCG...GCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp GCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGCAGGGGTGGCACATCTaGGCACACACTGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AWPGKHGCSDPSFLLPTGQGWHI*AHTVSC
Trigger: GCAGCTCACAGTGTGTGCCCAGATGTGCCACCCCTG...CCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGAGTTGTGTGCACCGCTaGGGCATCAGGCACTCGTGC +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVSCVHR*GIRHSC
Trigger: GCACGAGTGCCTGATGCCCCAGCGGTGCACACAACT...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGATCTGCTCACTCACCCTaGGGCCGGGCTGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGSAHSP*GRAAPC
Trigger: GCATGGAGCAGCCCGGCCCCAGGGTGAGTGAGCAGA...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR TCA 90 bp ATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTTTCAGGAATACAGCCTaGCCGGACGAGGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: MAGKTWLQRSQLLAAHRGFRNTA*PDEGGH
Trigger: GTGTCCGCCCTCGTCCGGTCAGGCTGTATTCCTGAA...ACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp ATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTTCTGGCCCTTCACCCTaGTCACCGCAAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MAGKTWLQRSQLLAAHRGSGPSP*SPQTPG
Trigger: GCCTGGAGTTTGCGGTGATCAGGGTGAAGGGCCAGA...ACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp CCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACGTGCACATGTCACTGGAAGGAGAATCGCTTaGGCCCGGGAGGCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PHFSHTVSTASWARAHVTGRRIA*AREAQV
Trigger: AACCTGCGCCTCCCGGGCTCAAGCGATTCTCCTTCC...AGTGACATGTGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAAGACAGAGGTCGCCATaGTGTTGCCCAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVARQRSP*CCPGWS
Trigger: AGACCAGCCTGGGCAACATCATGGCGACCTCTGTCT...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR GCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCACGTCCCGGTCCTTGTaGGCAAAGGCAAACGTGGGC +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSTSRSL*AKANVG
Trigger: GCCCACGTTTGCCTTTGCGCACAAGGACCGGGACGT...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCAGCCTGTTGACCTGCTaGAGCGTCTCGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAISLLTC*SVSALR
Trigger: CCTGAGCGCCGAGACGCTGCAGCAGGTCAACAGGCT...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGACGTCCACCTTCTCTGTaGCCCAGCTGCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGRPPSL*PSCAPA
Trigger: TGCTGGAGCGCAGCTGGGGCACAGAGAAGGTGGACG...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp TCTCCAAACCCATTCCTTTCCCTGTCTCCCGTTCCAGTTAACGGCCCAGCTCATGGCGCCCGTGCCACCTaGCGTGAGAGCGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: SPNPFLSLSPVPVNGPAHGARAT*RESGGT
Trigger: AGTGCCACCGCTCTCACGGCAGGTGGCACGGGCGCC...ATGAGCTGGGCCGTTAACTGGAACGGGAGACAGGGAAAGGAATGGGTTTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAGCACACACTGTGAGCTaGTCAGAGGCACTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAAHTVS*SEALWW
Trigger: CCACCAGAGTGCCTCTGAGCAGCTCACAGTGTGTGC...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATGCGATCCCAGCTTCTTaGTGCCCACAGGGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDAIPAS*CPQGWH
Trigger: GTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGC...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp GGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCGATGCACCCTTTCCTTCTAGAGGAGCCCGTGGCTaGCACCCCTCTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: GLPVSSTKGLFRDAPFPSRGARG*HPSRGC
Trigger: GCATCCCCGAGAGGGGTGGCAGCCACGGGCTCCTCT...AGAAGGAAAGGGTGCATCGCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp ATCCCACCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCAATGTCACTCACGCACTaGTGGGGCGACAGGCGACTG +
Preference number: 4 (lower is better)
Translates to: IPPVLPHFSHTVSTASWAMSLTH*WGDRRL
Trigger: CAGTCGCCTGTCGCCCCAGCAGTGCGTGAGTGACAT...TGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGGTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATAGTGGAACGACCGACTaGACGGCGGCCGAGCGCGGA +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHSGTTD*TAAERG
Trigger: TCCGCGCTCGGCCGCCGTGCAGTCGGTCGTTCCACT...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS-3UTR CCA 90 bp ACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCTGGGTCAGCCACTGGGCCATaGAGCGTTCGTCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: TCIVGTSGACALVVCTAGSATGP*SVRPAR
Trigger: CCGAGCGGGACGAACGCTCCATGGCCCAGTGGCTGA...CCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGTGCCTTCCAGGGGACTaGGCACCTTGGCGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMCLPGD*APWRPC
Trigger: GCACGGGCGCCAAGGTGCCCAGTCCCCTGGAAGGCA...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATTGCTCAGAGGCACTCTaGTGGGCAGCTCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDCSEAL*WAAPIA
Trigger: GGCGATGGGAGCTGCCCACCAGAGTGCCTCTGAGCA...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCTGCTCAGAGGCACTCTaGTGGGCAGCTCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAICSEAL*WAAPIA
Trigger: GGCGATGGGAGCTGCCCACCAGAGTGCCTCTGAGCA...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCTGCTGCCCACAGGGGTaGCACATCTGGGCACACACT +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSCCPQG*HIWAHT
Trigger: AGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCA...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCGTTACAACGCCGGCATaGCCGGGAAAACATGGCTGC +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAAVTTPA*PGKHGC
Trigger: GCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAAC...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGTTACAACGCCGGCATaGCCGGGAAAACATGGCTGC +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVVTTPA*PGKHGC
Trigger: GCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAAC...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCACCATGCTGGTCAGGCTaGTCTCAAACTCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAPCWSG*SQTPDL
Trigger: GAGGTCGGGAGTTTGAGACCAGCCTGACCAGCATGG...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACCGGAGCCGGACCACGTaGGCGAAGGCGGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LFLQGKVLRLQRRHGRENRSRTT*AKAEVE
Trigger: TTCCACTTCCGCCTTCGCCCACGTGGTCCGGCTCCG...GTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS-3UTR CCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAGGCCGCTTACTCCTCTaGCCTCCTGAAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAGRLLL*PPEVLR
Trigger: TCTCAGCACTTCAGGAGGCCAGAGGAGTAAGCGGCC...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR TCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATACCGCCCCGGGACCCTaGCGGATCAACTCCAACGTC +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHTAPGP*RINSNV
Trigger: GACGTTGGAGTTGATCCGTCAGGGTCCCGGGGCGGT...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376649.8
ENST00000542167.2
CDS-3UTR GCA 90 bp GACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCTACCACCTGGCCGGCTaGGGACACACCCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: DRRLRISHMHCWHVRRMRYHLAG*GHTLVC
Trigger: ACAGACAAGGGTGTGTCCGCAGCCGGCCAGGTGGTA...GCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp ACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCTGGGAGCCTGTTGACCTGCTaGAGCGTCTCGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TCIVGTSGACALVVCTAGSLLTC*SVSALR
Trigger: CCTGAGCGCCGAGACGCTGCAGCAGGTCAACAGGCT...CCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGTCCTGCGGCCCCTTCTaGGAGGTGAAATTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVSCGPF*EVKLWK
Trigger: CTTCCACAATTTCACCTCGCAGAAGGGGCCGCAGGA...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCTCCTGCGGCCCCTTCTaGGAGGTGAAATTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAASCGPF*EVKLWK
Trigger: CTTCCACAATTTCACCTCGCAGAAGGGGCCGCAGGA...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAACCTTTCCTTCCTCCTaGGCCCAGTCCAGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGTFPSS*AQSSGS
Trigger: TGAGCCGCTGGACTGGGCGCAGGAGGAAGGAAAGGT...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGCTCCTCCTTGAAGGCTaGGACCTTTCCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVLLLEG*DLSFLL
Trigger: CAGGAGGAAGGAAAGGTCGCAGCCTTCAAGGAGGAG...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCTGTGGATGGGCAAGGTaGTCAGCCACTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAICGWAR*SATGPW
Trigger: CCATGGCCCAGTGGCTGAGCACCTTGCCCATCCACA...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp ATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGCACACACTGTGAGCTaGTCAGAGGCACTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MAGKTWLQRSQLLAAHRGAHTVS*SEALWW
Trigger: CCACCAGAGTGCCTCTGAGCAGCTCACAGTGTGTGC...ACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCACCGGGAAAACATGGCTaGAGCGATCCCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAPGKHG*SDPSFL
Trigger: CAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATCGTGCATTGGTCACGTaGGCCCACGGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHRALVT*AHGLQA
Trigger: AGCCTGCAGCCCGTGGGCGCACGTGACCAATGCACG...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp TGCAGCAGCGGCTGGTGGGGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCGGGGCGACAGGCGACTaGGCATTAGTCACATGCATT +
Preference number: 4 (lower is better)
Translates to: CSSGWWGLPVSSTKGLFRGATGD*ALVTCI
Trigger: AATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCC...GCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACCCCACCAGCCGCTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGTCCGGGCGCAGCGCTaGAAGGACATTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSVRAQR*KDIFLM
Trigger: CATGAGGAAAATGTCCTTCCAGCGCTGCGCCCGGAC...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp CTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACTTCAGGGATACCACCTaGCCGGCTGCGGACACACCC +
Preference number: 4 (lower is better)
Translates to: LFLQGKVLRLQRRHGRENFRDTT*PAADTP
Trigger: GGGTGTGTCCGCAGCCGGCCAGGTGGTATCCCTGAA...GTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp TGCAGCAGCGGCTGGTGGGGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCGCGCAAAGGCAAACGTaGGCAGCAGGTAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: CSSGWWGLPVSSTKGLFRAQRQT*AAGSNR
Trigger: CCTATTGCTACCTGCTGCCCACGTTTGCCTTTGCGC...GCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACCCCACCAGCCGCTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAATGGCCGGGAAAACATaGCTGCAGCGATCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAMAGKT*LQRSQL
Trigger: AAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGATGGCCGGGAAAACATaGCTGCAGCGATCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVMAGKT*LQRSQL
Trigger: AAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp GCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGCAAAGGCTGCACGCATaGGGCTGTCTAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: AWPGKHGCSDPSFLLPTGQRLHA*GCLGRG
Trigger: TCCTCTTCCTAGACAGCCCCATGCGTGCAGCCTTTG...CCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp ACGCACTGCTGGGGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACTGCAGCAGCGGCTGGTaGGGTCTTCCAGTAAGCTCC +
Preference number: 4 (lower is better)
Translates to: THCWGDRRLRISHMHCWHCSSGW*GLPVSS
Trigger: GGAGCTTACTGGAAGACCCCACCAGCCGCTGCTGCA...GTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp GGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATGCTGTGCCCCTCCCTGGGCTCCTaGCAGCCCGCCAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLSLLFSRICSQRDTMLCPSLGS*QPASQG
Trigger: TCCTTGGCTGGCGGGCTGCCAGGAGCCCAGGGAGGG...GCACAGCATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAATGCCCGAATAGGCCATaGGCAGCACGATCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: RLFLQGKVLRLQRRHGRECPNRP*AARSSA
Trigger: AGCGGAAGATCGTGCTGCTCATGGCCTATTCGGGCA...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR TCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGATGCCCGAATAGGCCATaGGCAGCACGATCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGCPNRP*AARSSA
Trigger: AGCGGAAGATCGTGCTGCTCATGGCCTATTCGGGCA...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR TCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATTGCCCGAATAGGCCATaGGCAGCACGATCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDCPNRP*AARSSA
Trigger: AGCGGAAGATCGTGCTGCTCATGGCCTATTCGGGCA...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR TCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGCCCCTTCTGCGAGGTaGAATTGTGGAAGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSAPSAR*NCGSCA
Trigger: CGCACAACTTCCACAATTTCACCTCGCAGAAGGGGC...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp AGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCCCCGCTCGGTGCCGATaGTGGTGGGGTAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: SHMHCWHVRRMRISCVHRPARCR*WWGRCA
Trigger: AGCACATCTACCCCACCATCATCGGCACCGAGCGGG...GCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGCCCGCTCGGTGCCGATaGTGGTGGGGTAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMPARCR*WWGRCA
Trigger: AGCACATCTACCCCACCATCATCGGCACCGAGCGGG...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp ACGCACTGCTGGGGCGACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACTCTGGGCACACACTGTaGGCTGCTCAGAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: THCWGDRRLRISHMHCWHSGHTL*AAQRHS
Trigger: AGAGTGCCTCTGAGCAGCTCACAGTGTGTGCCCAGA...GTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTCGCCCCAGCAGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCTCTGGGCACACACTGTaGGCTGCTCAGAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAISGHTL*AAQRHS
Trigger: AGAGTGCCTCTGAGCAGCTCACAGTGTGTGCCCAGA...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATAGGAGCCTGTTGACCTaGTGCAGCGTCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHRSLLT*CSVSAL
Trigger: GAGCGCCGAGACGCTGCAGCAGGTCAACAGGCTCCT...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCTCCTGCGGCCCCTTCTaGGAGGTGAAATTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSSCGPF*EVKLWK
Trigger: CTTCCACAATTTCACCTCGCAGAAGGGGCCGCAGGA...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATCGTCCACCTTCTCTGTaGCCCAGCTGCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHRPPSL*PSCAPA
Trigger: TGCTGGAGCGCAGCTGGGGCACAGAGAAGGTGGACG...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGCATGCAGCCCATCGTTaGCAAAGCGCTGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: AWPGKHGCSDPSFLLPTGHAAHR*QSAGCT
Trigger: AGTACAACCAGCGCTTTGGCAACGATGGGCTGCATG...CCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCGCACACACTGTGAGCTaGTCAGAGGCACTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DRRLRISHMHCWHVRRMRAHTVS*SEALWW
Trigger: CCACCAGAGTGCCTCTGAGCAGCTCACAGTGTGTGC...GCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCGATCCCAGCTTCTTaGTGCCCACAGGGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMAIPAS*CPQGWH
Trigger: GTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGC...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp TGCAGCAGCGGCTGGTGGGGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCCGGGACACCATGCTGTaGTCATCTCTGTGGACGAAA +
Preference number: 4 (lower is better)
Translates to: CSSGWWGLPVSSTKGLFRRDTML*SSLWTK
Trigger: TTTCGTCCACAGAGATGAGCACAGCATGGTGTCCCG...GCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACCCCACCAGCCGCTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCTCAACGGGACACCATaGTGTGCTCATCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAALNGTP*CAHLCG
Trigger: TCCACAGAGATGAGCACAGCATGGTGTCCCGTTGAG...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCTGCGCATTAGTTGTGTaGACCGCTGGGGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAICALVV*TAGASG
Trigger: GCCTGATGCCCCAGCGGTGCACACAACTAATGCGCA...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCCGCATCATGGGCACGTaGACATGTCACTCACGCACT +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSRIMGT*TCHSRT
Trigger: AGTGCGTGAGTGACATGTGCACGTGCCCATGATGCG...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGCAGGACCTCCGGTCCTaGGGGCATGCGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPEQDLRS*GHAAPA
Trigger: CGCCGGAGCCGCATGCCCCCAGGACCGGAGGTCCTG...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR CCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATGTCCGGGCGCAGCGCTaGAAGGACATTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDVRAQR*KDIFLM
Trigger: CATGAGGAAAATGTCCTTCCAGCGCTGCGCCCGGAC...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGCGCAAAGGCAAACGTaGGCAGCAGGTAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSAQRQT*AAGSNR
Trigger: CCTATTGCTACCTGCTGCCCACGTTTGCCTTTGCGC...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGTGTAGCGGCAGGCACTaGGATCCTGCGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMCSGRH*DPAAPS
Trigger: AGAAGGGGCCGCAGGATCCCAGTGCCTGCCGCTACA...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp GGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATGCTGTGCTGCCTTCCAGGGGACTaGGCACCTTGGCGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GLSLLFSRICSQRDTMLCCLPGD*APWRPC
Trigger: GCACGGGCGCCAAGGTGCCCAGTCCCCTGGAAGGCA...GCACAGCATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCTCCATGCTAGGGGGTaGGTAGTGTGGAATGGAATC +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAALHARG*VVWNGI
Trigger: GATTCCATTCCACACTACCCACCCCCTAGCATGGAG...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR TCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATTTCAGGAATACAGCCTaGCCGGACGAGGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHFRNTA*PDEGGH
Trigger: GTGTCCGCCCTCGTCCGGTCAGGCTGTATTCCTGAA...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp GGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATGCTGTGCAGGCCAGGAGCCTGTTaGCCTGCTGCAGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: GLSLLFSRICSQRDTMLCRPGAC*PAAASR
Trigger: CCGAGACGCTGCAGCAGGTCAACAGGCTCCTGGCCT...GCACAGCATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAGCCCCTTCTGCGAGGTaGAATTGTGGAAGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: RLFLQGKVLRLQRRHGREAPSAR*NCGSCA
Trigger: CGCACAACTTCCACAATTTCACCTCGCAGAAGGGGC...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCGGATCTGATGCATCATaGAGCTCTGGCCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAIGSDAS*SSGPSP
Trigger: GGGTGAAGGGCCAGAGCTTCATGATGCATCAGATCC...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAACCATCTTCCGGATCTaGTGCATCATGAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVATIFRI*CIMKLW
Trigger: CCAGAGCTTCATGATGCATCAGATCCGGAAGATGGT...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCAGATGTGCTCCTCCTTaGAGGCTGCGACCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSRCAPP*RLRPFL
Trigger: AAGGAAAGGTCGCAGCCTTCAAGGAGGAGCACATCT...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp GGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATGCTGTGCACCGCCCCGGGACCCTaGCGGATCAACTCCAACGTC +
Preference number: 4 (lower is better)
Translates to: GLSLLFSRICSQRDTMLCTAPGP*RINSNV
Trigger: GACGTTGGAGTTGATCCGTCAGGGTCCCGGGGCGGT...GCACAGCATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp GACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCTACAAGGGAAGGTCCTaGGGTTACAACGCCGGCATG +
Preference number: 4 (lower is better)
Translates to: DRRLRISHMHCWHVRRMRYKGRS*GYNAGM
Trigger: CATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTA...GCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATTACAAGGGAAGGTCCTaGGGTTACAACGCCGGCATG +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDYKGRS*GYNAGM
Trigger: CATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTA...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGTCAGGAGGTGACCCCTaGCCTCTCAGGCCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPESGGDP*PLRPRA
Trigger: GGCGCGGGGCCTGAGAGGTCAGGGGTCACCTCCTGA...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR TCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAACTCCTCTGGCCTCCTaGAGTGCTGAGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVATPLAS*SAEITS
Trigger: ACTTGTAATCTCAGCACTTCAGGAGGCCAGAGGAGT...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR GCA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATTGTGGAAGTTGTGCGTaGCCTTGTAGCAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDCGSCA*PCSRPG
Trigger: TCCTGGCCTGCTACAAGGGCACGCACAACTTCCACA...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGATGTGGAAGTTGTGCGTaGCCTTGTAGCAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGCGSCA*PCSRPG
Trigger: TCCTGGCCTGCTACAAGGGCACGCACAACTTCCACA...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATACCTTTCCTTCCTCCTaGGCCCAGTCCAGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHTFPSS*AQSSGS
Trigger: TGAGCCGCTGGACTGGGCGCAGGAGGAAGGAAAGGT...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp ATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCCCCAGCTCCGCCTCTaGCGACCCCTAACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ISHMHCWHVRRMRISCVHPQLRL*RPLTSR
Trigger: CCGAGAGGTTAGGGGTCGGCAGAGGCGGAGCTGGGG...GTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTTACCCAGGGAAGCTGGAGGCCCATaGGCAGGCTACCAGTGCACC +
Preference number: 4 (lower is better)
Translates to: PPCPANLLQRRGFTILPREAGGP*AGYQCT
Trigger: GGTGCACTGGTAGCCTGCGCATGGGCCTCCAGCTTC...CCTGGGTAAAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp ATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACGGTCAGCGGGGCCCCTaGTTCAGTGCCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ISHMHCWHVRRMRISCVHGQRGP*FSALHS
Trigger: GCTGTGGAGGGCACTGAAGCAGGGGCCCCGCTGACC...GTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGGCATCAGGCACTCGTaGATTGGTCACGTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMGIRHS*IGHVRP
Trigger: TGGGCGCACGTGACCAATGCACGAGTGCCTGATGCC...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAGCGCAAAGGCAAACGTaGGCAGCAGGTAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: RLFLQGKVLRLQRRHGREAQRQT*AAGSNR
Trigger: CCTATTGCTACCTGCTGCCCACGTTTGCCTTTGCGC...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp TGCAGCAGCGGCTGGTGGGGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCTGCGAGGTGAAATTGTaGAAGTTGTGCGTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CSSGWWGLPVSSTKGLFRCEVKL*KLCVPL
Trigger: CAAGGGCACGCACAACTTCCACAATTTCACCTCGCA...GCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACCCCACCAGCCGCTGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp GCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGTGCGAGGTGAAATTGTaGAAGTTGTGCGTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: AWPGKHGCSDPSFLLPTGCEVKL*KLCVPL
Trigger: CAAGGGCACGCACAACTTCCACAATTTCACCTCGCA...CCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp ATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTTGCATCATGAAGCTCTaGCCCTTCACCCTGATCACC +
Preference number: 4 (lower is better)
Translates to: MAGKTWLQRSQLLAAHRGCIMKL*PFTLIT
Trigger: GGTGATCAGGGTGAAGGGCCAGAGCTTCATGATGCA...ACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGACATAACCCTTCACAATaGCCACCACCAGGCCGACCA +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGHNPSQ*PPPGRP
Trigger: TGGTCGGCCTGGTGGTGGCCATTGTGAAGGGTTATG...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCGTGGCACTGAAGTTGTaGATGGGCAAGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAIVALKL*MGKVLS
Trigger: GCTGAGCACCTTGCCCATCCACAACTTCAGTGCCAC...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATCAGGGGTGGCACATCTaGGCACACACTGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHQGWHI*AHTVSC
Trigger: GCAGCTCACAGTGTGTGCCCAGATGTGCCACCCCTG...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGCAGGGGTGGCACATCTaGGCACACACTGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMQGWHI*AHTVSC
Trigger: GCAGCTCACAGTGTGTGCCCAGATGTGCCACCCCTG...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp GGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCGATGCACCCTTTCCTTCTTGCTGCCCACAGGGGTaGCACATCTGGGCACACACT +
Preference number: 4 (lower is better)
Translates to: GLPVSSTKGLFRDAPFPSCCPQG*HIWAHT
Trigger: AGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCA...AGAAGGAAAGGGTGCATCGCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp ACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCTGGGGTTACAACGCCGGCATaGCCGGGAAAACATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TCIVGTSGACALVVCTAGVTTPA*PGKHGC
Trigger: GCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAAC...CCCAGCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAGTCACATGCATTGTTaGCACGTCAGGCGCATGCGC +
Preference number: 4 (lower is better)
Translates to: RLFLQGKVLRLQRRHGRESHMHC*HVRRMR
Trigger: GCGCATGCGCCTGACGTGCCAACAATGCATGTGACT...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCGTGTCCACCGCATCATaGGCACGTGCACATGTCACT +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAIVSTAS*ARAHVT
Trigger: AGTGACATGTGCACGTGCCCATGATGCGGTGGACAC...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTCCAGCTCCACTCTCTTaGGCACCCCACGCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: RACRHAQLIFCRDAVSPFPAPLS*APHALG
Trigger: TCCTAGGGCGTGGGGTGCCCAAGAGAGTGGAGCTGG...AAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTCGCTGGATGCACCTGTaGCCAATGACGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RACRHAQLIFCRDAVSPFRWMHL*PMTCSS
Trigger: GCTGCTGCACGTCATTGGTCACAGGTGCATCCAGCG...AAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTACGTCCCGGTCCTTGTaGGCAAAGGCAAACGTGGGC +
Preference number: 4 (lower is better)
Translates to: RACRHAQLIFCRDAVSPFTSRSL*AKANVG
Trigger: GCCCACGTTTGCCTTTGCGCACAAGGACCGGGACGT...AAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTTACCCAGGTGTGGATGGGCAAGGTaGTCAGCCACTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PPCPANLLQRRGFTILPRCGWAR*SATGPW
Trigger: CCATGGCCCAGTGGCTGAGCACCTTGCCCATCCACA...CCTGGGTAAAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CCTGAGCAGCTGAACTACAGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAATCCCAGCTTCTTGCTaGCCACAGGGGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: PEQLNYRACRHAQLIFCRIPASC*PQGWHI
Trigger: GATGTGCCACCCCTGTGGGCAGCAAGAAGCTGGGAT...TCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCTGTAGTTCAGCTGCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGATCCCAGCTTCTTGCTaGCCACAGGGGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMIPASC*PQGWHI
Trigger: GATGTGCCACCCCTGTGGGCAGCAAGAAGCTGGGAT...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCGCCCCAACCCCCACCTaGCTGGCACCGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSAPTPT*LAPGQC
Trigger: GCACTGTCCCGGTGCCAGGCAGGTGGGGGTTGGGGC...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CCAGCTCATCCATCCCTCAAACCCAAAGCCCAGTGGGCCTCACACCTGCACTCCTGCGCATTAGTCACATaGATTGTTGGCACGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PAHPSLKPKAQWASHLHSCALVT*IVGTSG
Trigger: GCCTGACGTGCCAACAATGCATGTGACTAATGCGCA...GGAGTGCAGGTGTGAGGCCCACTGGGCTTTGGGTTTGAGGGATGGATGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCACCCTGGGGCCGGGCTaGTCCATGCTAGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSTLGPG*SMLGGG
Trigger: CCCACCCCCTAGCATGGAGCAGCCCGGCCCCAGGGT...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR CCA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCGGTAGCAATAGGTCCTaGCATCACATCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAAGSNRS*HHICSW
Trigger: CCAAGAACAGATGTGATGCCAGGACCTATTGCTACC...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGATGCATCATGAAGCTCTaGCCCTTCACCCTGATCACC +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGCIMKL*PFTLIT
Trigger: GGTGATCAGGGTGAAGGGCCAGAGCTTCATGATGCA...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp CCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTTACCCAGGAAGGTGCTCAGCCACTaGGCCATGGAGCGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: PPCPANLLQRRGFTILPRKVLSH*AMERSS
Trigger: GGACGAACGCTCCATGGCCCAGTGGCTGAGCACCTT...CCTGGGTAAAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp TCTCCAAACCCATTCCTTTCCCTGTCTCCCGTTCCAGTTAACGGCCCAGCTCATCAGGGGTGGCACATCTaGGCACACACTGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPNPFLSLSPVPVNGPAHQGWHI*AHTVSC
Trigger: GCAGCTCACAGTGTGTGCCCAGATGTGCCACCCCTG...ATGAGCTGGGCCGTTAACTGGAACGGGAGACAGGGAAAGGAATGGGTTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp CCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACGTGCAAGGGAAGGTGGCTGTTaGTCTTTTCTAGAATGTCGT +
Preference number: 4 (lower is better)
Translates to: PVLPHFSHTVSTASWARAREGGC*SFLECR
Trigger: ACGACATTCTAGAAAAGATCAACAGCCACCTTCCCT...TGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAAGGGAAGGTGGCTGTTaGTCTTTTCTAGAATGTCGT +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAREGGC*SFLECR
Trigger: ACGACATTCTAGAAAAGATCAACAGCCACCTTCCCT...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp CTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACAGATGTGCTCCTCCTTaGAGGCTGCGACCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFLQGKVLRLQRRHGRENRCAPP*RLRPFL
Trigger: AAGGAAAGGTCGCAGCCTTCAAGGAGGAGCACATCT...GTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp CTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACTTGTACTTCTCGAAGTaGACCCTCTCCAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LFLQGKVLRLQRRHGRENLYFSK*TLSRTR
Trigger: CCTGGTCCTGGAGAGGGTGCACTTCGAGAAGTACAA...GTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATCCGGGAAAACATGGCTaGAGCGATCCCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHPGKHG*SDPSFL
Trigger: CAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp AGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTCAGCCAAGGATCCCCTaGTCCTGGCTAACGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RACRHAQLIFCRDAVSPFQPRIP*SWLTQC
Trigger: ACACTGCGTTAGCCAGGAGCAGGGGATCCTTGGCTG...AAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCTGCGAGGTGAAATTGTaGAAGTTGTGCGTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KVLRLQRRHGRENMAAAICEVKL*KLCVPL
Trigger: CAAGGGCACGCACAACTTCCACAATTTCACCTCGCA...GATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGCATAACCCTTCACAATaGCCACCACCAGGCCGACCA +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMHNPSQ*PPPGRP
Trigger: TGGTCGGCCTGGTGGTGGCCATTGTGAAGGGTTATG...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp ATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGTCGCCACCGCTCTTaGGCTTCTTCGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: ISHMHCWHVRRMRISCVHRRHRS*ASSPDV
Trigger: AACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACG...GTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCCTCATGTCCTCACCATaGTTTTCAGGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSLMSSP*FSGIQP
Trigger: AGGCTGTATTCCTGAAAATCATGGTGAGGACATGAG...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGCCCGCTCGGTGCCGATaGTGGTGGGGTAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPEPARCR*WWGRCA
Trigger: AGCACATCTACCCCACCATCATCGGCACCGAGCGGG...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCCTCCTGAAGTGCTaGGATTACAAGTGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHGLLKC*DYKCEL
Trigger: CAGCTCACACTTGTAATCTCAGCACTTCAGGAGGCC...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR GCA 90 bp AGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCCATGCAGCCCATCGTTaGCAAAGCGCTGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: SHMHCWHVRRMRISCVHRHAAHR*QSAGCT
Trigger: AGTACAACCAGCGCTTTGGCAACGATGGGCTGCATG...GCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTTACCCAGGCTCCTCCTTGAAGGCTaGGACCTTTCCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PPCPANLLQRRGFTILPRLLLEG*DLSFLL
Trigger: CAGGAGGAAGGAAAGGTCGCAGCCTTCAAGGAGGAG...CCTGGGTAAAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp TTTTTGAGTGCAGTGGCAATCAGGGCAGCCTCGACTTCTCCAGACTCAGGCAATCAATCCCACCTGTCCTaGCCCACTTCTCACACACGG +
Preference number: 4 (lower is better)
Translates to: FLSAVAIRAASTSPDSGNQSHLS*PTSHTR
Trigger: CCGTGTGTGAGAAGTGGGGCAGGACAGGTGGGATTG...ATTGCCTGAGTCTGGAGAAGTCGAGGCTGCCCTGATTGCCACTGCACTCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCATGCGCGGCGAGCTaGGGAGAAGGGCGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVPCAAS*GEGRRE
Trigger: CTCACGCCGCCCTTCTCCGCAGCTCGCCGCGCATGG...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535067.5
CDS-3UTR GCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCGCGTTCCCGGCCATaGGCGGCGAGCTGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVPRSRP*AASCGE
Trigger: TTCTCCGCAGCTCGCCGCGCATGGCCGGGAACGCGG...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535067.5
CDS-3UTR GCA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAATTACAAGTGTGAGCTaGCACGCTCATGTGAAAACA +
Preference number: 4 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAITSVS*HAHVKT
Trigger: TGTTTTCACATGAGCGTGGCAGCTCACACTTGTAAT...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR CCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGAACAGCGCGCGAAGCTaGAGGCCCATGCGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPENSARS*RPMRRL
Trigger: TAGCCTGCGCATGGGCCTCCAGCTTCGCGCGCTGTT...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp GACAGGCGACTGCGCATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCCTCATGTCCTCACCATaGTTTTCAGGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: DRRLRISHMHCWHVRRMRLMSSP*FSGIQP
Trigger: AGGCTGTATTCCTGAAAATCATGGTGAGGACATGAG...GCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAATGCGCAGTCGCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAACTCATGTCCTCACCATaGTTTTCAGGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: RLFLQGKVLRLQRRHGRELMSSP*FSGIQP
Trigger: AGGCTGTATTCCTGAAAATCATGGTGAGGACATGAG...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATACCATCTTCCGGATCTaGTGCATCATGAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHTIFRI*CIMKLW
Trigger: CCAGAGCTTCATGATGCATCAGATCCGGAAGATGGT...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp TCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGCGGCACTTCCTCCGCTaGGCCCCTCCCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLHAEVHLCNARAENRFERHFLR*APPWAP
Trigger: AGGAGCCCAGGGAGGGGCTCAGCGGAGGAAGTGCCG...CTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp ATCCCACCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACAGGATCATCAAAAGTaGTTTAAATGGGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: IPPVLPHFSHTVSTASWAQDHQK*FKWVTQ
Trigger: CTGGGTGACCCATTTAAATCACTTTTGATGATCCTG...TGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGGTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGCGACATTCCTCTGCATaGCGTGGTAGCCCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPERHSSA*RGSPCP
Trigger: CGGGCAAGGGCTACCACGGCATGCAGAGGAATGTCG...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR GCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCAGCCTGTTGACCTGCTaGAGCGTCTCGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSSLLTC*SVSALR
Trigger: CCTGAGCGCCGAGACGCTGCAGCAGGTCAACAGGCT...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCTCCGTCCCCTTCACTaGCTTCCAGGGGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTLRPLH*LPGDWA
Trigger: TGCCCAGTCCCCTGGAAGGCAGTGAAGGGGACGGAG...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTTGCCCTCCACAGCCCTaGCTCGGGACCACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVCPPQP*LGTTLQ
Trigger: CTGCAGGGTGGTCCCGAGGCAGGGCTGTGGAGGGCA...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp ATTAGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACAGCAGTGAGCCCCACTaGTCCTCTGGCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: ISHMHCWHVRRMRISCVHSSEPH*SSGQNP
Trigger: GGGATTTTGGCCAGAGGAGCAGTGGGGCTCACTGCT...GTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCCGAGTCCGGGCGCCTTaGGCACGTCCACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EVHLCNARAENRFEKGCSRVRAP*ARPPSL
Trigger: CAGAGAAGGTGGACGTGCCCAAGGCGCCCGGACTCG...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp GGTCTTCCAGTAAGCTCCACTAAGGGCCTGTTCCGCGATGCACCCTTTCCTTCTCCATTTTACCCAGGCTaGTCTGGAACTCCTGTACTC +
Preference number: 4 (lower is better)
Translates to: GLPVSSTKGLFRDAPFPSPFYPG*SGTPVL
Trigger: GAGTACAGGAGTTCCAGACCAGCCTGGGTAAAATGG...AGAAGGAAAGGGTGCATCGCGGAACAGGCCCTTAGTGGAGCTTACTGGAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
3UTR CAA 72 bp CCAAGGATCCCCTGCTCCTGGCTAACGCAGTGTGTTTaGTTCCACGCTAAGCGCCACTTCAAAAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PRIPCSWLTQCV*FHAKRHFKSSL
Trigger: AAGACTGCTTTTGAAGTGGCGCTTAGCGTGGAACAAAACACACTGCGTTAGCCAGGAGCAGGGGATCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAATTGTTTTGAATTGTaGGGACCCGACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGNCFEL*GPDIPL
Trigger: CAGAGGAATGTCGGGTCCTCACAATTCAAAACAATT...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGTTCAGGAATACAGCCTaGCCGGACGAGGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTFRNTA*PDEGGH
Trigger: GTGTCCGCCCTCGTCCGGTCAGGCTGTATTCCTGAA...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTAGGCCAGGAGCCTGTTaGCCTGCTGCAGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVRPGAC*PAAASR
Trigger: CCGAGACGCTGCAGCAGGTCAACAGGCTCCTGGCCT...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGTCTGGCCCTTCACCCTaGTCACCGCAAACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTSGPSP*SPQTPG
Trigger: GCCTGGAGTTTGCGGTGATCAGGGTGAAGGGCCAGA...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp CCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACGTGCAAGGCAAACCAAGGATTaGCTAAGCAAAATTTGTACT +
Preference number: 4 (lower is better)
Translates to: PVLPHFSHTVSTASWARARQTKD*LSKICT
Trigger: AGTACAAATTTTGCTTAGTCAATCCTTGGTTTGCCT...TGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGTGCACCTGTGACCAATaGCGTGCAGCAGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTCTCDQ*RAAAAG
Trigger: ACCAGCCGCTGCTGCACGTCATTGGTCACAGGTGCA...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTAGAGAGGCTCGCTCCTaGCCCATTCGCGACGCGGCT +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVREARS*PIRDAA
Trigger: AGCCGCGTCGCGAATGGGGCAGGAGCGAGCCTCTCT...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCCTCCGTCCCCTTCACTaGCTTCCAGGGGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: EVHLCNARAENRFEKGCSLRPLH*LPGDWA
Trigger: TGCCCAGTCCCCTGGAAGGCAGTGAAGGGGACGGAG...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGATCCCAGCTTCTTGCTaGCCACAGGGGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPEIPASC*PQGWHI
Trigger: GATGTGCCACCCCTGTGGGCAGCAAGAAGCTGGGAT...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTGCCTCGGGACCACCCTaGAGAGTGCAGGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVASGPP*RVQDAG
Trigger: CCCAGCATCCTGCACTCTGCAGGGTGGTCCCGAGGC...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGAGGCGAGTACCGACCTaGAACCAGGGCAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTRRVPT*NQGKGC
Trigger: GCAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCT...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATCAGGACCTCCGGTCCTaGGGGCATGCGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDQDLRS*GHAAPA
Trigger: CGCCGGAGCCGCATGCCCCCAGGACCGGAGGTCCTG...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR CCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTCCGGGCGCAGCGCTaGAAGGACATTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPEVRAQR*KDIFLM
Trigger: CATGAGGAAAATGTCCTTCCAGCGCTGCGCCCGGAC...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGGTAGCAATAGGTCCTaGCATCACATCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMGSNRS*HHICSW
Trigger: CCAAGAACAGATGTGATGCCAGGACCTATTGCTACC...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp GGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATGCTGTGCTGCATCATGAAGCTCTaGCCCTTCACCCTGATCACC +
Preference number: 4 (lower is better)
Translates to: GLSLLFSRICSQRDTMLCCIMKL*PFTLIT
Trigger: GGTGATCAGGGTGAAGGGCCAGAGCTTCATGATGCA...GCACAGCATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCGAGTCCGGGCGCCTTaGGCACGTCCACCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVRVRAP*ARPPSL
Trigger: CAGAGAAGGTGGACGTGCCCAAGGCGCCCGGACTCG...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp TCTCCAAACCCATTCCTTTCCCTGTCTCCCGTTCCAGTTAACGGCCCAGCTCATTCGTTGCCAAAGCGCTaGTTGTACTTCTCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SPNPFLSLSPVPVNGPAHSLPKR*LYFSKC
Trigger: GCACTTCGAGAAGTACAACCAGCGCTTTGGCAACGA...ATGAGCTGGGCCGTTAACTGGAACGGGAGACAGGGAAAGGAATGGGTTTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCAAGGTGCTCAGCCACTaGGCCATGGAGCGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSKVLSH*AMERSS
Trigger: GGACGAACGCTCCATGGCCCAGTGGCTGAGCACCTT...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGAAGGTGCTCAGCCACTaGGCCATGGAGCGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTKVLSH*AMERSS
Trigger: GGACGAACGCTCCATGGCCCAGTGGCTGAGCACCTT...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp GGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATGCTGTGCTTACCCAGGCTGGTCTaGAACTCCTGTACTCAAGCG +
Preference number: 4 (lower is better)
Translates to: GLSLLFSRICSQRDTMLCLPRLV*NSCTQA
Trigger: CGCTTGAGTACAGGAGTTCCAGACCAGCCTGGGTAA...GCACAGCATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGTCTGGGCACACACTGTaGGCTGCTCAGAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTSGHTL*AAQRHS
Trigger: AGAGTGCCTCTGAGCAGCTCACAGTGTGTGCCCAGA...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACCACCTGGCCGGCTaGGGACACACCCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: EVHLCNARAENRFEKGCSYHLAG*GHTLVC
Trigger: ACAGACAAGGGTGTGTCCGCAGCCGGCCAGGTGGTA...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGATCAGCCACTGGGCCATaGAGCGTTCGTCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRSATGP*SVRPAR
Trigger: CCGAGCGGGACGAACGCTCCATGGCCCAGTGGCTGA...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTTGCTCAGAGGCACTCTaGTGGGCAGCTCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVCSEAL*WAAPIA
Trigger: GGCGATGGGAGCTGCCCACCAGAGTGCCTCTGAGCA...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGACAGGCACTCGTGCATTaGTCACGTGCGCCCACGGGC +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRQALVH*SRAPTG
Trigger: GCCCGTGGGCGCACGTGACCAATGCACGAGTGCCTG...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAGGGCGAAGGCGGAAGTaGAACGACCGACTGCACGGC +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRGRRRK*NDRLHG
Trigger: GCCGTGCAGTCGGTCGTTCCACTTCCGCCTTCGCCC...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS-3UTR TCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCGTCGCCACCGCTCTTaGGCTTCTTCGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVRRHRS*ASSPDV
Trigger: AACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACG...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR TCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGAATTGTTTTGAATTGTaGGGACCCGACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMNCFEL*GPDIPL
Trigger: CAGAGGAATGTCGGGTCCTCACAATTCAAAACAATT...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCGGATCTGATGCATCATaGAGCTCTGGCCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSGSDAS*SSGPSP
Trigger: GGGTGAAGGGCCAGAGCTTCATGATGCATCAGATCC...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGTACAAGGGAAGGTCCTaGGGTTACAACGCCGGCATG +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTYKGRS*GYNAGM
Trigger: CATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTA...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCGGAGGGTGGATCACTTaGGATCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSGGWIT*DQEFET
Trigger: GGTCTCGAACTCCTGATCTCAAGTGATCCACCCTCC...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR GCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGTTGTACTTCTCGAAGTaGACCCTCTCCAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPELYFSK*TLSRTR
Trigger: CCTGGTCCTGGAGAGGGTGCACTTCGAGAAGTACAA...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGGCGCCCGTGCCACCTaGCGTGAGAGCGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTGARAT*RESGGT
Trigger: AGTGCCACCGCTCTCACGGCAGGTGGCACGGGCGCC...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp TCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGGCGATCCCAGCTTCTTaGTGCCCACAGGGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SLHAEVHLCNARAENRFEAIPAS*CPQGWH
Trigger: GTGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGC...CTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGATTCAGGGATACCACCTaGCCGGCTGCGGACACACCC +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRFRDTT*PAADTP
Trigger: GGGTGTGTCCGCAGCCGGCCAGGTGGTATCCCTGAA...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCCATAACCCTTCACAATaGCCACCACCAGGCCGACCA +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSHNPSQ*PPPGRP
Trigger: TGGTCGGCCTGGTGGTGGCCATTGTGAAGGGTTATG...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCGTGGCACTGAAGTTGTaGATGGGCAAGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSVALKL*MGKVLS
Trigger: GCTGAGCACCTTGCCCATCCACAACTTCAGTGCCAC...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGATGCTCAGAGGCACTCTaGTGGGCAGCTCCCATCGCC +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRCSEAL*WAAPIA
Trigger: GGCGATGGGAGCTGCCCACCAGAGTGCCTCTGAGCA...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCATGGCCGGGAAAACATaGCTGCAGCGATCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSMAGKT*LQRSQL
Trigger: AAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCAAACCCAAAGCCCAGTaGGCCTCACACCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: EVHLCNARAENRFEKGCSKPKAQ*ASHLHS
Trigger: GGAGTGCAGGTGTGAGGCCCACTGGGCTTTGGGTTT...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGCTGAGCTTAGGAGTTTaGGACCAGCCTGACCAACAT +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPELSLGV*DQPDQH
Trigger: ATGTTGGTCAGGCTGGTCTCAAACTCCTAAGCTCAG...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp TTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGATCAAAACACAGGTTTaGTTGAACCTGTGCATACAC +
Preference number: 4 (lower is better)
Translates to: FLQGKVLRLQRRHGRENMIKTQV*LNLCIH
Trigger: GTGTATGCACAGGTTCAATCAAACCTGTGTTTTGAT...CATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR GCA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCATGCAGCCCATCGTTaGCAAAGCGCTGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTHAAHR*QSAGCT
Trigger: AGTACAACCAGCGCTTTGGCAACGATGGGCTGCATG...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCCTCCTCCTTGAAGGCTaGGACCTTTCCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EVHLCNARAENRFEKGCSLLLEG*DLSFLL
Trigger: CAGGAGGAAGGAAAGGTCGCAGCCTTCAAGGAGGAG...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp TCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGTGTGGATGGGCAAGGTaGTCAGCCACTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SLHAEVHLCNARAENRFECGWAR*SATGPW
Trigger: CCATGGCCCAGTGGCTGAGCACCTTGCCCATCCACA...CTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTGGCACGTCAGGCGCATaGGCATTAGTTGTGTGCACC +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVGTSGA*ALVVCT
Trigger: GGTGCACACAACTAATGCGCATGCGCCTGACGTGCC...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGTCGTTGCCAAAGCGCTaGTTGTACTTCTCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPESLPKR*LYFSKC
Trigger: GCACTTCGAGAAGTACAACCAGCGCTTTGGCAACGA...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGATGCTGCCCACAGGGGTaGCACATCTGGGCACACACT +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRCCPQG*HIWAHT
Trigger: AGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCA...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp CCTCCTGGGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATAATTGTTTTGAATTGTaGGGACCCGACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PPGPFSFVQPYLFSTGHHNCFEL*GPDIPL
Trigger: CAGAGGAATGTCGGGTCCTCACAATTCAAAACAATT...ATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCCCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTGGATCTGATGCATCATaGAGCTCTGGCCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVGSDAS*SSGPSP
Trigger: GGGTGAAGGGCCAGAGCTTCATGATGCATCAGATCC...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTTGTGGAAGTTGTGCGTaGCCTTGTAGCAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVCGSCA*PCSRPG
Trigger: TCCTGGCCTGCTACAAGGGCACGCACAACTTCCACA...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCTCTGTGCCCCAGCTaGGCTCCAGCACGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDSLCPS*APARSQ
Trigger: CTGAGAGCGTGCTGGAGCGCAGCTGGGGCACAGAGA...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACATCAGCCACTGGGCCATaGAGCGTTCGTCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTSATGP*SVRPAR
Trigger: CCGAGCGGGACGAACGCTCCATGGCCCAGTGGCTGA...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACACTGACCTCTCGGACCTaGACGCCCCAGCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTLTSRT*TPQPHS
Trigger: GGAGTGAGGCTGGGGCGTCCAGGTCCGAGAGGTCAG...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACACCACGGGCTGCAGGCTaGGAGGCCACGTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTPRAAG*EATCMH
Trigger: GTGCATACACGTGGCCTCCCAGCCTGCAGCCCGTGG...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGATACAAGGGAAGGTCCTaGGGTTACAACGCCGGCATG +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRYKGRS*GYNAGM
Trigger: CATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTA...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATCGACATTCCTCTGCATaGCGTGGTAGCCCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDRHSSA*RGSPCP
Trigger: CGGGCAAGGGCTACCACGGCATGCAGAGGAATGTCG...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR GCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATACGTCCCGGTCCTTGTaGGCAAAGGCAAACGTGGGC +
Preference number: 4 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDTSRSL*AKANVG
Trigger: GCCCACGTTTGCCTTTGCGCACAAGGACCGGGACGT...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp CTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTTTGTACTTCTCGAAGTaGACCCTCTCCAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LRFIYAMQELKTDSRKAVLYFSK*TLSRTR
Trigger: CCTGGTCCTGGAGAGGGTGCACTTCGAGAAGTACAA...AACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATGGGCCTGTTCCGCGATaGACCCTTTCCTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDGPVPR*TLSFCP
Trigger: AGGGCAGAAGGAAAGGGTGCATCGCGGAACAGGCCC...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGCAGTTACAAAATCAGTaGCGTGGGTGCTACCTATAC +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPEQLQNQ*RGCYLY
Trigger: GTATAGGTAGCACCCACGGCACTGATTTTGTAACTG...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAGTGGCACTGAAGTTGTaGATGGGCAAGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRVALKL*MGKVLS
Trigger: GCTGAGCACCTTGCCCATCCACAACTTCAGTGCCAC...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTGCTGCCCACAGGGGTaGCACATCTGGGCACACACT +
Preference number: 4 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDCCPQG*HIWAHT
Trigger: AGTGTGTGCCCAGATGTGCCACCCCTGTGGGCAGCA...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAATGGCCGGGAAAACATaGCTGCAGCGATCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRMAGKT*LQRSQL
Trigger: AAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCCTCATGTCCTCACCATaGTTTTCAGGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSLMSSP*FSGIQP
Trigger: AGGCTGTATTCCTGAAAATCATGGTGAGGACATGAG...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR TCA 90 bp TCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAGATGTGCTCCTCCTTaGAGGCTGCGACCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLHAEVHLCNARAENRFERCAPP*RLRPFL
Trigger: AAGGAAAGGTCGCAGCCTTCAAGGAGGAGCACATCT...CTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGAAACACAGGTTTGATTaGACCTGTGCATACACCTAC +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPEKHRFD*TCAYTY
Trigger: GTAGGTGTATGCACAGGTTCAATCAAACCTGTGTTT...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542167.2
3UTR CAA 72 bp CAGGTAAAATTAACATGCTTAGAACCAAGCTCCTGCTaGTTCTCCAAACCCATTCCTTTCCCTGTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: QVKLTCLEPSSC*FSKPIPFPVSR
Trigger: ACGGGAGACAGGGAAAGGAATGGGTTTGGAGAACAAGCAGGAGCTTGGTTCTAAGCATGTTAATTTTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAGCTGCCACGCTCATGTaGAAACACTGTTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRAATLM*KHCFLL
Trigger: GAGCAGAAAACAGTGTTTTCACATGAGCGTGGCAGC...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR GCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATCCGGGAAAACATGGCTaGAGCGATCCCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDPGKHG*SDPSFL
Trigger: CAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGCAGGTAAAATTAACATaGTTAGAACCAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QELKTDSRKAVPTREGPEQVKLT*LEPSSC
Trigger: GCAGGAGCTTGGTTCTAAGCATGTTAATTTTACCTG...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR GCA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCCTGGGAAGTGGAGGTTaGAGTGAACTGATAATGTAC +
Preference number: 4 (lower is better)
Translates to: EVHLCNARAENRFEKGCSLGSGG*SELIMY
Trigger: GTACATTATCAGTTCACTGCAACCTCCACTTCCCAG...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR CCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGTCCGGGCGCAGCGCTaGAAGGACATTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTVRAQR*KDIFLM
Trigger: CATGAGGAAAATGTCCTTCCAGCGCTGCGCCCGGAC...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CCA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCGACCCGACATTCCTCTaGAAAAAGGAGACAAAAACA +
Preference number: 4 (lower is better)
Translates to: NARAENRFEKGCSYKGRSDPTFL*KKETKT
Trigger: TGTTTTTGTCTCCTTTTTCCAGAGGAATGTCGGGTC...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR TCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGCCCCTTCTGCGAGGTaGAATTGTGGAAGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTAPSAR*NCGSCA
Trigger: CGCACAACTTCCACAATTTCACCTCGCAGAAGGGGC...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR GCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACACCGGGAAAACATGGCTaGAGCGATCCCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTPGKHG*SDPSFL
Trigger: CAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR GCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGCCCTAGGAGCTCACTaGCTGAAGCATCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTALGAH*LKHLPI
Trigger: GATTGGGAGATGCTTCAGGCAGTGAGCTCCTAGGGC...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CCA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAGGTAGCAATAGGTCCTaGCATCACATCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRGSNRS*HHICSW
Trigger: CCAAGAACAGATGTGATGCCAGGACCTATTGCTACC...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGTTGCCAAAGCGCTaGTTGTACTTCTCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDSLPKR*LYFSKC
Trigger: GCACTTCGAGAAGTACAACCAGCGCTTTGGCAACGA...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR TCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAACCATCTTCCGGATCTaGTGCATCATGAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTTIFRI*CIMKLW
Trigger: CCAGAGCTTCATGATGCATCAGATCCGGAAGATGGT...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGCTGAGCCAACCTCCTaGGCCTTTCTCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTAEPTS*AFLFCS
Trigger: TGAACAAAAGAGAAAGGCCCAGGAGGTTGGCTCAGC...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR TCA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAAGGGAAGGTGGCTGTTaGTCTTTTCTAGAATGTCGT +
Preference number: 4 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTREGGC*SFLECR
Trigger: ACGACATTCTAGAAAAGATCAACAGCCACCTTCCCT...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS GCA 90 bp GATGTTCTCCGTCCTCCCAGACGCGGTCGCCCCCGGCCCGGCCGCTaGAGGACCTCCGGTCCTGGGGGCATGCGGCTCCGGCGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: DVLRPPRRGRPRPGR*RTSGPGGMRLRRAA
Trigger: CGCCGCCCGCCGGAGCCGCATGCCCCCAGGACCGGAGGTCCTGCAGCGGCCGGGCCGGGGGCGACCGCGTCTGGGAGGACGGAGAACATC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS CCA 90 bp GCGAGCTCTGACTTCCCCAGCCTCTTCACCTCCCGCCCCGCCCGGTaGGCTTTCCTCAGGAGTCGAGGAGACCCGGGCCACCCGCGTCGG +
Preference number: 5 (lower is better)
Translates to: ASSDFPSLFTSRPAR*AFLRSRGDPGHPRR
Trigger: CCGACGCGGGTGGCCCGGGTCTCCTCGACTCCTGAGGAAAGCCCACCGGGCGGGGCGGGAGGTGAAGAGGCTGGGGAAGTCAGAGCTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456665.6
ENST00000544662.1
CDS TCA 90 bp GGGACCAGAGAGGCTCGCTCCTGCCCCATTCGCGACGCGGCTGACTaGGCCGGAGCCGGACCACGTGGGCGAAGGCGGAAGTGGAACGAC +
Preference number: 5 (lower is better)
Translates to: GTREARSCPIRDAAD*AGAGPRGRRRKWND
Trigger: GTCGTTCCACTTCCGCCTTCGCCCACGTGGTCCGGCTCCGGCTCAGTCAGCCGCGTCGCGAATGGGGCAGGAGCGAGCCTCTCTGGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS TCA 90 bp CGTCGGGACCAGAGAGGCTCGCTCCTGCCCCATTCGCGACGCGGCTaGCTGAGCCGGAGCCGGACCACGTGGGCGAAGGCGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: RRDQRGSLLPHSRRG*LSRSRTTWAKAEVE
Trigger: TTCCACTTCCGCCTTCGCCCACGTGGTCCGGCTCCGGCTCAGTCAGCCGCGTCGCGAATGGGGCAGGAGCGAGCCTCTCTGGTCCCGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS TCA 90 bp TCCGCTTGGGCGGCTTCTCGCGCCGCTCCTCGTCGCCACCGCTCTTaGGCTTCTTCGCCGGATGTTCTCCGTCCTCCCAGACGCGGTCGC +
Preference number: 5 (lower is better)
Translates to: SAWAASRAAPRRHRS*ASSPDVLRPPRRGR
Trigger: GCGACCGCGTCTGGGAGGACGGAGAACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACGAGGAGCGGCGCGAGAAGCCGCCCAAGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS CCA 90 bp TTAACCTCTGACTTCCCCAGCCTCTTCACCTCCCGCCCCGCCCGGTaGGCTTTCCTCAGGAGTCGAGGAGACCCGGGCCACCCGCGTCGG +
Preference number: 5 (lower is better)
Translates to: LTSDFPSLFTSRPAR*AFLRSRGDPGHPRR
Trigger: CCGACGCGGGTGGCCCGGGTCTCCTCGACTCCTGAGGAAAGCCCACCGGGCGGGGCGGGAGGTGAAGAGGCTGGGGAAGTCAGAGGTTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376649.8
ENST00000542167.2
CDS-3UTR CAA 90 bp GCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGAGGGGACTGGGCACCTaGGCGCCCGTGCCACCTGCC +
Preference number: 5 (lower is better)
Translates to: AWPGKHGCSDPSFLLPTGRGLGT*APVPPA
Trigger: GGCAGGTGGCACGGGCGCCAAGGTGCCCAGTCCCCT...CCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp TGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCTGCGGACACACCCTaGTCTGTCCGGGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: WPGKHGCSDPSFLLPTGVAADTP*SVRAQR
Trigger: GCGCTGCGCCCGGACAGACAAGGGTGTGTCCGCAGC...CACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS GCA 90 bp CGAGTCCGGGCGCCTTGGGCACGTCCACCTTCTCTGTGCCCCAGCTaGGCTCCAGCACGCTCTCAGGGGCATAACCCTTCACAATGGCCA +
Preference number: 5 (lower is better)
Translates to: RVRAPWARPPSLCPS*APARSQGHNPSQWP
Trigger: TGGCCATTGTGAAGGGTTATGCCCCTGAGAGCGTGCTGGAGCGCAGCTGGGGCACAGAGAAGGTGGACGTGCCCAAGGCGCCCGGACTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CCA 90 bp TTGGCGCCCGTGCCACCTGCCGTGAGAGCGGTGGCACTGAAGTTGTaGATGGGCAAGGTGCTCAGCCACTGGGCCATGGAGCGTTCGTCC +
Preference number: 5 (lower is better)
Translates to: LAPVPPAVRAVALKL*MGKVLSHWAMERSS
Trigger: GGACGAACGCTCCATGGCCCAGTGGCTGAGCACCTTGCCCATCCACAACTTCAGTGCCACCGCTCTCACGGCAGGTGGCACGGGCGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS-3UTR CAA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGCTGCGGACACACCCTaGTCTGTCCGGGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSAADTP*SVRAQR
Trigger: GCGCTGCGCCCGGACAGACAAGGGTGTGTCCGCAGC...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp CCTGTCCTGCCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACGTGCACCGAGTCCGGGCGCCTaGGGCACGTCCACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PVLPHFSHTVSTASWARAPSPGA*GTSTFS
Trigger: AGAGAAGGTGGACGTGCCCAAGGCGCCCGGACTCGG...TGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGGCAGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS CCA 90 bp AGAGCGGTGGCACTGAAGTTGTGGATGGGCAAGGTGCTCAGCCACTaGGCCATGGAGCGTTCGTCCCGCTCGGTGCCGATGATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RAVALKLWMGKVLSH*AMERSSRSVPMMVG
Trigger: CCCCACCATCATCGGCACCGAGCGGGACGAACGCTCCATGGCCCAGTGGCTGAGCACCTTGCCCATCCACAACTTCAGTGCCACCGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS-3UTR CAA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATGCTGCGGACACACCCTaGTCTGTCCGGGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDAADTP*SVRAQR
Trigger: GCGCTGCGCCCGGACAGACAAGGGTGTGTCCGCAGC...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp ATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTCCGAGTCCGGGCGCCTaGGGCACGTCCACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: MAGKTWLQRSQLLAAHRGPSPGA*GTSTFS
Trigger: AGAGAAGGTGGACGTGCCCAAGGCGCCCGGACTCGG...ACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS TCA 90 bp CGACATTCCTCTGCATGCCGTGGTAGCCCTTGCCCGAATAGGCCATaGGCAGCACGATCTTCCGCTTGGGCGGCTTCTCGCGCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: RHSSACRGSPCPNRP*AARSSAWAASRAAP
Trigger: AGGAGCGGCGCGAGAAGCCGCCCAAGCGGAAGATCGTGCTGCTCATGGCCTATTCGGGCAAGGGCTACCACGGCATGCAGAGGAATGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS TCA 90 bp AGGAGAAAGGCAGGTGAGAAGTGCCTGGATGACCAGGGAGCAGCCTaGGCACGGCGTGAGCCCCAGCGTCTCCTTACCCAGAGCACCGAC +
Preference number: 5 (lower is better)
Translates to: RRKAGEKCLDDQGAA*ARREPQRLLTQSTD
Trigger: GTCGGTGCTCTGGGTAAGGAGACGCTGGGGCTCACGCCGTGCTCAGGCTGCTCCCTGGTCATCCAGGCACTTCTCACCTGCCTTTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543754.1
CDS-3UTR CAA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGACCGAGTCCGGGCGCCTaGGGCACGTCCACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGPSPGA*GTSTFS
Trigger: AGAGAAGGTGGACGTGCCCAAGGCGCCCGGACTCGG...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS TCA 90 bp GGATGTAGCGGCAGGCACTGGGATCCTGCGGCCCCTTCTGCGAGGTaGAATTGTGGAAGTTGTGCGTGCCCTTGTAGCAGGCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GCSGRHWDPAAPSAR*NCGSCACPCSRPGA
Trigger: GGCTCCTGGCCTGCTACAAGGGCACGCACAACTTCCACAATTTCACCTCGCAGAAGGGGCCGCAGGATCCCAGTGCCTGCCGCTACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CCA 90 bp TGCGCCCAGTCCAGCGGCTCATGCAGCCCATCGTTGCCAAAGCGCTaGTTGTACTTCTCGAAGTGCACCCTCTCCAGGACCAGGCCGAGT +
Preference number: 5 (lower is better)
Translates to: CAQSSGSCSPSLPKR*LYFSKCTLSRTRPS
Trigger: ACTCGGCCTGGTCCTGGAGAGGGTGCACTTCGAGAAGTACAACCAGCGCTTTGGCAACGATGGGCTGCATGAGCCGCTGGACTGGGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS-3UTR CAA 90 bp CCCCACTTCTCACACACGGTGTCCACCGCATCATGGGCACGTGCACATGTCACTACCAGCTCCACTCTCTaGGGCACCCCACGCCCTAGG +
Preference number: 5 (lower is better)
Translates to: PHFSHTVSTASWARAHVTTSSTL*GTPRPR
Trigger: CCTAGGGCGTGGGGTGCCCAAGAGAGTGGAGCTGGT...AGTGACATGTGCACGTGCCCATGATGCGGTGGACACCGTGTGTGAGAAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CAA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCTCGTCGCCACCGCTCTaGAGCTTCTTCGCCGGATGT +
Preference number: 5 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSSSPPL*SFFAGC
Trigger: ACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACGA...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR CAA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATAGCGATCCCAGCTTCTaGCTGCCCACAGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDSDPSF*LPTGVA
Trigger: TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCT...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CAA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGAGGTCGCCATGATGTaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSEVAMM*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAACATCATGGCGACCTC...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS TCA 90 bp AATTGTGGAAGTTGTGCGTGCCCTTGTAGCAGGCCAGGAGCCTGTTaGCCTGCTGCAGCGTCTCGGCGCTCAGGCGGTAGGTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: NCGSCACPCSRPGAC*PAAASRRSGGRSHP
Trigger: AGGATGAGACCTACCGCCTGAGCGCCGAGACGCTGCAGCAGGTCAACAGGCTCCTGGCCTGCTACAAGGGCACGCACAACTTCCACAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS-3UTR CAA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATCAGGCCAGGAGCCTGTaGACCTGCTGCAGCGTCTCG +
Preference number: 5 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHQARSL*TCCSVS
Trigger: CGAGACGCTGCAGCAGGTCAACAGGCTCCTGGCCTG...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp TGGCACCGGGACAGTGCTGAGGCGAGTACCGACCTGCAACCAGGGCAAAGGCTGTTGCCAAAGCGCTGGTaGTACTTCTCGAAGTGCACC +
Preference number: 5 (lower is better)
Translates to: WHRDSAEASTDLQPGQRLLPKRW*YFSKCT
Trigger: GGTGCACTTCGAGAAGTACAACCAGCGCTTTGGCAA...CAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCGGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CAA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAGCGGTGGCACTGAAGTaGTGGATGGGCAAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: RLFLQGKVLRLQRRHGREAVALK*WMGKVL
Trigger: GAGCACCTTGCCCATCCACAACTTCAGTGCCACCGC...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp TGGCACCGGGACAGTGCTGAGGCGAGTACCGACCTGCAACCAGGGCAAAGGCTGCTAACGCAGTGTGTTTaGTTCCACGCTAAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: WHRDSAEASTDLQPGQRLLTQCV*FHAKRH
Trigger: GTGGCGCTTAGCGTGGAACAAAACACACTGCGTTAG...CAGCCTTTGCCCTGGTTGCAGGTCGGTACTCGCCTCAGCACTGTCCCGGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CAA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCGCATCACATCTGTTCTaGGAGTTAAACCCGCCCGTG +
Preference number: 5 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAAASHLF*ELNPPV
Trigger: CACGGGCGGGTTTAACTCCAAGAACAGATGTGATGC...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCTTGCCAAAGCGCTGGTaGTACTTCTCGAAGTGCACC +
Preference number: 5 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAALPKRW*YFSKCT
Trigger: GGTGCACTTCGAGAAGTACAACCAGCGCTTTGGCAA...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATCGTGGTGCCGGGCTCTaGAGGCAGGAGAATCGCTTG +
Preference number: 5 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHRGAGL*RQENRL
Trigger: CAAGCGATTCTCCTGCCTCAAGAGCCCGGCACCACG...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS TCA 90 bp GTCCGGGCGCAGCGCTGGAAGGACATTTTCCTCATGTCCTCACCATaGTTTTCAGGAATACAGCCTGACCGGACGAGGGCGGACACCAAG +
Preference number: 5 (lower is better)
Translates to: VRAQRWKDIFLMSSP*FSGIQPDRTRADTK
Trigger: CTTGGTGTCCGCCCTCGTCCGGTCAGGCTGTATTCCTGAAAATCATGGTGAGGACATGAGGAAAATGTCCTTCCAGCGCTGCGCCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000542167.2
ENST00000544213.5
ENST00000544662.1
CDS-3UTR CAA 90 bp AGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGCATCACATCTGTTCTaGGAGTTAAACCCGCCCGTG +
Preference number: 5 (lower is better)
Translates to: REGPEVTTPAWPGKHGCSASHLF*ELNPPV
Trigger: CACGGGCGGGTTTAACTCCAAGAACAGATGTGATGC...GCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp GTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGCGGTGGCACTGAAGTaGTGGATGGGCAAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: VPTREGPEVTTPAWPGKHAVALK*WMGKVL
Trigger: GAGCACCTTGCCCATCCACAACTTCAGTGCCACCGC...ATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp AGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTAGCGATCCCAGCTTCTaGCTGCCCACAGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RACRHAQLIFCRDAVSPFSDPSF*LPTGVA
Trigger: TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCT...AAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS TCA 90 bp AACACAGAGTCCCACTGGCAGGGAGCATCTAGATCCAGCTATACCTaGGCCGACCAGGCTCCTGGACGTCTCACCTACATAAGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: NTESHWQGASRSSYT*ADQAPGRLTYIRRR
Trigger: CCTACGCCTTATGTAGGTGAGACGTCCAGGAGCCTGGTCGGCTCAGGTATAGCTGGATCTAGATGCTCCCTGCCAGTGGGACTCTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544662.1
CDS-3UTR CAA 90 bp CCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCCACAGGGGTGGCAGAGGGAAGGTGGCTGTaGATCTTTTCTAGAATGTCG +
Preference number: 5 (lower is better)
Translates to: PGKHGCSDPSFLLPTGVAEGRWL*IFSRMS
Trigger: CGACATTCTAGAAAAGATCAACAGCCACCTTCCCTC...TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAGCATCACATCTGTTCTaGGAGTTAAACCCGCCCGTG +
Preference number: 5 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGASHLF*ELNPPV
Trigger: CACGGGCGGGTTTAACTCCAAGAACAGATGTGATGC...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp AAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGATTCTGCGAGGTGAAATaGTGGAAGTTGTGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: KAVPTREGPEVTTPAWPGFCEVK*WKLCVP
Trigger: GGGCACGCACAACTTCCACAATTTCACCTCGCAGAA...TCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp AGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAATTGCCAAAGCGCTGGTaGTACTTCTCGAAGTGCACC +
Preference number: 5 (lower is better)
Translates to: RLFLQGKVLRLQRRHGRELPKRW*YFSKCT
Trigger: GGTGCACTTCGAGAAGTACAACCAGCGCTTTGGCAA...TTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCAGGGGACTGGGCACCTaGTCTGTCCGGGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: NARAENRFEKGCSYKGRSRGLGT*SVRAQR
Trigger: GCGCTGCGCCCGGACAGACAAGGTGCCCAGTCCCCT...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535067.5
CDS CCA 90 bp AGGTCTCATCCTGAACGTCCCGGTCCTTGTGCGCAAAGGCAAACGTaGGCAGCAGGTAGCAATAGGTCCTGGCATCACATCTGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RSHPERPGPCAQRQT*AAGSNRSWHHICSW
Trigger: CCAAGAACAGATGTGATGCCAGGACCTATTGCTACCTGCTGCCCACGTTTGCCTTTGCGCACAAGGACCGGGACGTTCAGGATGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000537484.1
ENST00000542167.2
ENST00000543754.1
CDS-3UTR CAA 90 bp CTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACTTCTGCGAGGTGAAATaGTGGAAGTTGTGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: LFLQGKVLRLQRRHGRENFCEVK*WKLCVP
Trigger: GGGCACGCACAACTTCCACAATTTCACCTCGCAGAA...GTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS TCA 90 bp AGCCTGACCGGACGAGGGCGGACACCAAGTCATCTTCAATTGTTTTaGATTGTGAGGACCCGACATTCCTCTGCATGCCGTGGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: SLTGRGRTPSHLQLF*IVRTRHSSACRGSP
Trigger: AGGGCTACCACGGCATGCAGAGGAATGTCGGGTCCTCACAATTCAAAACAATTGAAGATGACTTGGTGTCCGCCCTCGTCCGGTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS-3UTR CAA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCAGCACGATCTTCCGCTaGGGCGGCTTCTCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: EVHLCNARAENRFEKGCSSTIFR*GGFSRR
Trigger: GCGGCGCGAGAAGCCGCCCAAGCGGAAGATCGTGCT...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR CAA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGCAGGCCAGGAGCCTGTaGACCTGCTGCAGCGTCTCG +
Preference number: 5 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTQARSL*TCCSVS
Trigger: CGAGACGCTGCAGCAGGTCAACAGGCTCCTGGCCTG...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAGGGGACTGGGCACCTaGGCGCCCGTGCCACCTGCC +
Preference number: 5 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRRGLGT*APVPPA
Trigger: GGCAGGTGGCACGGGCGCCAAGGTGCCCAGTCCCCT...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGTCGTCGCCACCGCTCTaGAGCTTCTTCGCCGGATGT +
Preference number: 5 (lower is better)
Translates to: QELKTDSRKAVPTREGPESSPPL*SFFAGC
Trigger: ACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACGA...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR CAA 90 bp AACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATCCCAGCTTCTTGCTGCCTCATCTTCAATTGTTTaGAATTGTGAGGACCCGACA +
Preference number: 5 (lower is better)
Translates to: NAGMAGKTWLQRSQLLAASSSIV*NCEDPT
Trigger: TGTCGGGTCCTCACAATTCAAAACAATTGAAGATGA...GGCAGCAAGAAGCTGGGATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CAA 90 bp AGGGCATGCCGCCATGCCCAGCTAATCTTTTGCAGAGACGCGGTTTCACCATTTTTCTGCGAGGTGAAATaGTGGAAGTTGTGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: RACRHAQLIFCRDAVSPFFCEVK*WKLCVP
Trigger: GGGCACGCACAACTTCCACAATTTCACCTCGCAGAA...AAATGGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCATGGCGGCATGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CAA 90 bp GAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTCAGGCACTCGTGCATaGGTCACGTGCGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: EVHLCNARAENRFEKGCSSGTRA*VTCAHG
Trigger: CCCGTGGGCGCACGTGACCAATGCACGAGTGCCTGA...GGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CAA 90 bp AGTCACATGCATTGTTGGCACGTCAGGCGCATGCGCATTAGTTGTGTGCACCGCGAGGGAAGGTGGCTGTaGATCTTTTCTAGAATGTCG +
Preference number: 5 (lower is better)
Translates to: SHMHCWHVRRMRISCVHREGRWL*IFSRMS
Trigger: CGACATTCTAGAAAAGATCAACAGCCACCTTCCCTC...GCGGTGCACACAACTAATGCGCATGCGCCTGACGTGCCAACAATGCATGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CAA 90 bp AAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGGTTACAACGGCGGTGGCACTGAAGTaGTGGATGGGCAAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: KTDSRKAVPTREGPEVTTAVALK*WMGKVL
Trigger: GAGCACCTTGCCCATCCACAACTTCAGTGCCACCGC...CGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp GGCCTTTCTCTTTTGTTCAGCCGTATCTGTTCTCAACGGGACACCATGCTGTGCTGCCCAGCTAATCTTTaGCAGAGACGCGGTTTCACC +
Preference number: 5 (lower is better)
Translates to: GLSLLFSRICSQRDTMLCCPANL*QRRGFT
Trigger: GGTGAAACCGCGTCTCTGCAAAAGATTAGCTGGGCA...GCACAGCATGGTGTCCCGTTGAGAACAGATACGGCTGAACAAAAGAGAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CAA 90 bp GAAGGTCCTGAGGTTACAACGCCGGCATGGCCGGGAAAACATGGCTGCAGCGATTCATCTTCAATTGTTTaGAATTGTGAGGACCCGACA +
Preference number: 5 (lower is better)
Translates to: EGPEVTTPAWPGKHGCSDSSSIV*NCEDPT
Trigger: TGTCGGGTCCTCACAATTCAAAACAATTGAAGATGA...ATCGCTGCAGCCATGTTTTCCCGGCCATGCCGGCGTTGTAACCTCAGGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS TCA 90 bp CCCGCTTCAGTCCCAGAATCCGAATGTGAGAGGGAAGGTGGCTGTTaGTCTTTTCTAGAATGTCGTCAATCAGCCACACCTTCAGGGATA +
Preference number: 5 (lower is better)
Translates to: PASVPESECEREGGC*SFLECRQSATPSGI
Trigger: TATCCCTGAAGGTGTGGCTGATTGACGACATTCTAGAAAAGATCAACAGCCACCTTCCCTCTCACATTCGGATTCTGGGACTGAAGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp CTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAAGCGATCCCAGCTTCTaGCTGCCCACAGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LYMLRFIYAMQELKTDSRSDPSF*LPTGVA
Trigger: TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCT...TCTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CAA 90 bp TCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGTCGTCGCCACCGCTCTaGAGCTTCTTCGCCGGATGT +
Preference number: 5 (lower is better)
Translates to: SLHAEVHLCNARAENRFESSPPL*SFFAGC
Trigger: ACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACGA...CTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS-3UTR CAA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAAGCACGATCTTCCGCTaGGGCGGCTTCTCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTSTIFR*GGFSRR
Trigger: GCGGCGCGAGAAGCCGCCCAAGCGGAAGATCGTGCT...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
CDS TCA 90 bp AGCCTGACCGGACGAGGGCGGACACCAAGTCATCTTCAATTGTTTTaGATTGTGAGGACCCGACATTCCTCTGGAAAAAGGAGACAAAAA +
Preference number: 5 (lower is better)
Translates to: SLTGRGRTPSHLQLF*IVRTRHSSGKRRQK
Trigger: TTTTTGTCTCCTTTTTCCAGAGGAATGTCGGGTCCTCACAATTCAAAACAATTGAAGATGACTTGGTGTCCGCCCTCGTCCGGTCAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR CAA 90 bp CAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTGAGCTGGGCCTTTCTCTTTaGTTCAGCCGTATCTGTTCT +
Preference number: 5 (lower is better)
Translates to: QELKTDSRKAVPTREGPELGLSL*FSRICS
Trigger: AGAACAGATACGGCTGAACAAAAGAGAAAGGCCCAG...CTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS TCA 90 bp GACCAGGCTCCTGGACGTCTCACCTACATAAGGCGTAGGCTAGTTTaGTTTGTACATCATTATGTGCTCAGAAACAGCATAACAAGCCAG +
Preference number: 5 (lower is better)
Translates to: DQAPGRLTYIRRRLV*FVHHYVLRNSITSQ
Trigger: CTGGCTTGTTATGCTGTTTCTGAGCACATAATGATGTACAAATCAAACTAGCCTACGCCTTATGTAGGTGAGACGTCCAGGAGCCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544662.1
CDS-3UTR CAA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAAGCGATCCCAGCTTCTaGCTGCCCACAGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTSDPSF*LPTGVA
Trigger: TGCCACCCCTGTGGGCAGCAAGAAGCTGGGATCGCT...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CAA 90 bp AATGCAAGAGCTGAAAACAGATTCGAGAAAGGCTGTTCCTACAAGGGAAGGTCCTCATCTTCAATTGTTTaGAATTGTGAGGACCCGACA +
Preference number: 5 (lower is better)
Translates to: NARAENRFEKGCSYKGRSSSSIV*NCEDPT
Trigger: TGTCGGGTCCTCACAATTCAAAACAATTGAAGATGA...GGACCTTCCCTTGTAGGAACAGCCTTTCTCGAATCTGTTTTCAGCTCTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000535067.5
ENST00000542167.2
CDS-3UTR CAA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATGAGGGAAGGTGGCTGTaGATCTTTTCTAGAATGTCG +
Preference number: 5 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDEGRWL*IFSRMS
Trigger: CGACATTCTAGAAAAGATCAACAGCCACCTTCCCTC...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS-3UTR CAA 90 bp TCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATTCGAGAACAGATTTTATATTTaGCAGACAGAGGTCGCCATG +
Preference number: 5 (lower is better)
Translates to: SLHAEVHLCNARAENRFENRFYI*QTEVAM
Trigger: CATGGCGACCTCTGTCTGCAAAATATAAAATCTGTT...CTCGAATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS-3UTR CAA 90 bp ATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAGATAAGGCAAACCAAGGATaGACTAAGCAAAATTTGTAC +
Preference number: 5 (lower is better)
Translates to: IVLYMLRFIYAMQELKTDKANQG*TKQNLY
Trigger: GTACAAATTTTGCTTAGTCAATCCTTGGTTTGCCTT...ATCTGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376649.8
CDS-3UTR CAA 90 bp AAAATAGTTCTTTACATGCTGAGGTTCATCTATGCAATGCAAGAGCTGAAAACAAATCAAAACACAGGTTaGATTGAACCTGTGCATACA +
Preference number: 5 (lower is better)
Translates to: KIVLYMLRFIYAMQELKTNQNTG*IEPVHT
Trigger: TGTATGCACAGGTTCAATCAAACCTGTGTTTTGATT...TGTTTTCAGCTCTTGCATTGCATAGATGAACCTCAGCATGTAAAGAACTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS CCA 72 bp TCCCGGCCATGCGCGGCGAGCTCCCGCCCCGCCCGGTaGGCTTTCCTCAGGAGTCGAGGAGACCCGGGCCAC +
Preference number: 6 (lower is better)
Translates to: SRPCAASSRPAR*AFLRSRGDPGH
Trigger: GTGGCCCGGGTCTCCTCGACTCCTGAGGAAAGCCCACCGGGCGGGGCGGGAGCTCGCCGCGCATGGCCGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS TCA 72 bp GAGGCTCGCTCCTGCCCCATTCGCGACGCGGCTGACTaGGCCGGAGCCGGACCACGTGGGCGAAGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: EARSCPIRDAAD*AGAGPRGRRRK
Trigger: CTTCCGCCTTCGCCCACGTGGTCCGGCTCCGGCTCAGTCAGCCGCGTCGCGAATGGGGCAGGAGCGAGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS TCA 72 bp CAGAGAGGCTCGCTCCTGCCCCATTCGCGACGCGGCTaGCTGAGCCGGAGCCGGACCACGTGGGCGAAGGCG +
Preference number: 6 (lower is better)
Translates to: QRGSLLPHSRRG*LSRSRTTWAKA
Trigger: CGCCTTCGCCCACGTGGTCCGGCTCCGGCTCAGTCAGCCGCGTCGCGAATGGGGCAGGAGCGAGCCTCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443358.6
CDS CCA 72 bp GTCCACCGTCCGAAGGCTCCCAACAGCGCGCGAAGCTaGAGGCCCATGCGCAGGCTACCAGTGCACCCGACC +
Preference number: 6 (lower is better)
Translates to: VHRPKAPNSARS*RPMRRLPVHPT
Trigger: GGTCGGGTGCACTGGTAGCCTGCGCATGGGCCTCCAGCTTCGCGCGCTGTTGGGAGCCTTCGGACGGTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376649.8
ENST00000544213.5
CDS CAA 90 bp TTCCGCTTGGGCGGCTTCTCGCGCCGCTCCTCGTCGCCACCGCTCTaGAGCTTCTTCGCCGGATGTTCTCCGTCCTCCCAGACGCGGTCG +
Preference number: 6 (lower is better)
Translates to: FRLGGFSRRSSSPPL*SFFAGCSPSSQTRS
Trigger: CGACCGCGTCTGGGAGGACGGAGAACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACGAGGAGCGGCGCGAGAAGCCGCCCAAGCGGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS CAA 90 bp TTCTCGAAGTGCACCCTCTCCAGGACCAGGCCGAGTCCGGGCGCCTaGGGCACGTCCACCTTCTCTGTGCCCCAGCTGCGCTCCAGCACG +
Preference number: 6 (lower is better)
Translates to: FSKCTLSRTRPSPGA*GTSTFSVPQLRSST
Trigger: CGTGCTGGAGCGCAGCTGGGGCACAGAGAAGGTGGACGTGCCCAAGGCGCCCGGACTCGGCCTGGTCCTGGAGAGGGTGCACTTCGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CAA 72 bp GGCGGCTTCTCGCGCCGCTCCTCGTCGCCACCGCTCTaGAGCTTCTTCGCCGGATGTTCTCCGTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: GGFSRRSSSPPL*SFFAGCSPSSQ
Trigger: CTGGGAGGACGGAGAACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACGAGGAGCGGCGCGAGAAGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS TCA 72 bp GCGGCTTCTCGCGCCGCTCCTCGTCGCCACCGCTCTTaGGCTTCTTCGCCGGATGTTCTCCGTCCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: AASRAAPRRHRS*ASSPDVLRPPR
Trigger: TCTGGGAGGACGGAGAACATCCGGCGAAGAAGCTCAAGAGCGGTGGCGACGAGGAGCGGCGCGAGAAGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS GCA 72 bp TTCCAGGGGACTGGGCACCTTGGCGCCCGTGCCACCTaGCGTGAGAGCGGTGGCACTGAAGTTGTGGATGGG +
Preference number: 6 (lower is better)
Translates to: FQGTGHLGARAT*RESGGTEVVDG
Trigger: CCCATCCACAACTTCAGTGCCACCGCTCTCACGGCAGGTGGCACGGGCGCCAAGGTGCCCAGTCCCCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS GCA 72 bp TCCCATCGCCTCAGTCAGTGTCTCCGTCCCCTTCACTaGCTTCCAGGGGACTGGGCACCTTGGCGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: SHRLSQCLRPLH*LPGDWAPWRPC
Trigger: GCACGGGCGCCAAGGTGCCCAGTCCCCTGGAAGGCAGTGAAGGGGACGGAGACACTGACTGAGGCGATGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CAA 90 bp ACCTTGGCGCCCGTGCCACCTGCCGTGAGAGCGGTGGCACTGAAGTaGTGGATGGGCAAGGTGCTCAGCCACTGGGCCATGGAGCGTTCG +
Preference number: 6 (lower is better)
Translates to: TLAPVPPAVRAVALK*WMGKVLSHWAMERS
Trigger: CGAACGCTCCATGGCCCAGTGGCTGAGCACCTTGCCCATCCACAACTTCAGTGCCACCGCTCTCACGGCAGGTGGCACGGGCGCCAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS TCA 72 bp AGTTGTGCGTGCCCTTGTAGCAGGCCAGGAGCCTGTTaGCCTGCTGCAGCGTCTCGGCGCTCAGGCGGTAGG +
Preference number: 6 (lower is better)
Translates to: SCACPCSRPGAC*PAAASRRSGGR
Trigger: CCTACCGCCTGAGCGCCGAGACGCTGCAGCAGGTCAACAGGCTCCTGGCCTGCTACAAGGGCACGCACAACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS TCA 72 bp GCAGGTGAGAAGTGCCTGGATGACCAGGGAGCAGCCTaGGCACGGCGTGAGCCCCAGCGTCTCCTTACCCAG +
Preference number: 6 (lower is better)
Translates to: AGEKCLDDQGAA*ARREPQRLLTQ
Trigger: CTGGGTAAGGAGACGCTGGGGCTCACGCCGTGCTCAGGCTGCTCCCTGGTCATCCAGGCACTTCTCACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543754.1
CDS CAA 72 bp CCCGTGCCACCTGCCGTGAGAGCGGTGGCACTGAAGTaGTGGATGGGCAAGGTGCTCAGCCACTGGGCCATG +
Preference number: 6 (lower is better)
Translates to: PVPPAVRAVALK*WMGKVLSHWAM
Trigger: CATGGCCCAGTGGCTGAGCACCTTGCCCATCCACAACTTCAGTGCCACCGCTCTCACGGCAGGTGGCACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS GCA 72 bp CCATCGTTGCCAAAGCGCTGGTTGTACTTCTCGAAGTaGACCCTCTCCAGGACCAGGCCGAGTCCGGGCGCC +
Preference number: 6 (lower is better)
Translates to: PSLPKRWLYFSK*TLSRTRPSPGA
Trigger: GGCGCCCGGACTCGGCCTGGTCCTGGAGAGGGTGCACTTCGAGAAGTACAACCAGCGCTTTGGCAACGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS GCA 72 bp TCCCATCGCCTCAGTCAGTGTCTCCGTCCCCTTCACTaGCTTCCAGGGGACTGGGCACCTTGTCTGTCCGGG +
Preference number: 6 (lower is better)
Translates to: SHRLSQCLRPLH*LPGDWAPCLSG
Trigger: CCCGGACAGACAAGGTGCCCAGTCCCCTGGAAGGCAGTGAAGGGGACGGAGACACTGACTGAGGCGATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535067.5
CDS CCA 72 bp GCACTGAAGTTGTGGATGGGCAAGGTGCTCAGCCACTaGGCCATGGAGCGTTCGTCCCGCTCGGTGCCGATG +
Preference number: 6 (lower is better)
Translates to: ALKLWMGKVLSH*AMERSSRSVPM
Trigger: CATCGGCACCGAGCGGGACGAACGCTCCATGGCCCAGTGGCTGAGCACCTTGCCCATCCACAACTTCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CCA 72 bp GTGCCACCTGCCGTGAGAGCGGTGGCACTGAAGTTGTaGATGGGCAAGGTGCTCAGCCACTGGGCCATGGAG +
Preference number: 6 (lower is better)
Translates to: VPPAVRAVALKL*MGKVLSHWAME
Trigger: CTCCATGGCCCAGTGGCTGAGCACCTTGCCCATCCACAACTTCAGTGCCACCGCTCTCACGGCAGGTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS TCA 72 bp TCTGCATGCCGTGGTAGCCCTTGCCCGAATAGGCCATaGGCAGCACGATCTTCCGCTTGGGCGGCTTCTCGC +
Preference number: 6 (lower is better)
Translates to: SACRGSPCPNRP*AARSSAWAASR
Trigger: GCGAGAAGCCGCCCAAGCGGAAGATCGTGCTGCTCATGGCCTATTCGGGCAAGGGCTACCACGGCATGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS GCA 72 bp CCTGCGCCCAGTCCAGCGGCTCATGCAGCCCATCGTTaGCAAAGCGCTGGTTGTACTTCTCGAAGTGCACCC +
Preference number: 6 (lower is better)
Translates to: PAPSPAAHAAHR*QSAGCTSRSAP
Trigger: GGGTGCACTTCGAGAAGTACAACCAGCGCTTTGGCAACGATGGGCTGCATGAGCCGCTGGACTGGGCGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CCA 72 bp ATGTCGTCAATCAGCCACACCTTCAGGGATACCACCTaGCCGGCTGCGGACACACCCTTGTCTGTCCGGGCG +
Preference number: 6 (lower is better)
Translates to: MSSISHTFRDTT*PAADTPLSVRA
Trigger: CGCCCGGACAGACAAGGGTGTGTCCGCAGCCGGCCAGGTGGTATCCCTGAAGGTGTGGCTGATTGACGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000538037.5
ENST00000542167.2
CDS TCA 72 bp GGCAGGCACTGGGATCCTGCGGCCCCTTCTGCGAGGTaGAATTGTGGAAGTTGTGCGTGCCCTTGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: GRHWDPAAPSAR*NCGSCACPCSR
Trigger: CCTGCTACAAGGGCACGCACAACTTCCACAATTTCACCTCGCAGAAGGGGCCGCAGGATCCCAGTGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CAA 72 bp TCCTGCGCCCAGTCCAGCGGCTCATGCAGCCCATCGTaGCCAAAGCGCTGGTTGTACTTCTCGAAGTGCACC +
Preference number: 6 (lower is better)
Translates to: SCAQSSGSCSPS*PKRWLYFSKCT
Trigger: GGTGCACTTCGAGAAGTACAACCAGCGCTTTGGCAACGATGGGCTGCATGAGCCGCTGGACTGGGCGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CCA 72 bp GCTCCAGCACGCTCTCAGGGGCATAACCCTTCACAATaGCCACCACCAGGCCGACCATCTTCCGGATCTGAT +
Preference number: 6 (lower is better)
Translates to: APARSQGHNPSQ*PPPGRPSSGSD
Trigger: ATCAGATCCGGAAGATGGTCGGCCTGGTGGTGGCCATTGTGAAGGGTTATGCCCCTGAGAGCGTGCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CCA 72 bp TCCAGCGGCTCATGCAGCCCATCGTTGCCAAAGCGCTaGTTGTACTTCTCGAAGTGCACCCTCTCCAGGACC +
Preference number: 6 (lower is better)
Translates to: SSGSCSPSLPKR*LYFSKCTLSRT
Trigger: GGTCCTGGAGAGGGTGCACTTCGAGAAGTACAACCAGCGCTTTGGCAACGATGGGCTGCATGAGCCGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS CCA 72 bp CCTGAACGTCCCGGTCCTTGTGCGCAAAGGCAAACGTaGGCAGCAGGTAGCAATAGGTCCTGGCATCACATC +
Preference number: 6 (lower is better)
Translates to: PERPGPCAQRQT*AAGSNRSWHHI
Trigger: GATGTGATGCCAGGACCTATTGCTACCTGCTGCCCACGTTTGCCTTTGCGCACAAGGACCGGGACGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000537484.1
ENST00000542167.2
ENST00000543754.1
CDS TCA 72 bp ACAATGGCCACCACCAGGCCGACCATCTTCCGGATCTaGTGCATCATGAAGCTCTGGCCCTTCACCCTGATC +
Preference number: 6 (lower is better)
Translates to: TMATTRPTIFRI*CIMKLWPFTLI
Trigger: GATCAGGGTGAAGGGCCAGAGCTTCATGATGCATCAGATCCGGAAGATGGTCGGCCTGGTGGTGGCCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
ENST00000543754.1
CDS TCA 72 bp TCCCACTGGCAGGGAGCATCTAGATCCAGCTATACCTaGGCCGACCAGGCTCCTGGACGTCTCACCTACATA +
Preference number: 6 (lower is better)
Translates to: SHWQGASRSSYT*ADQAPGRLTYI
Trigger: TATGTAGGTGAGACGTCCAGGAGCCTGGTCGGCTCAGGTATAGCTGGATCTAGATGCTCCCTGCCAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544662.1
CDS GCA 72 bp CAGAGTGAGCCTGATTGGAGGGTCGAAAGCAGACATTaGGGCCGCCACTGTGCCACCTGCAAGAATGTGTGT +
Preference number: 6 (lower is better)
Translates to: QSEPDWRVESRH*GRHCATCKNVC
Trigger: ACACACATTCTTGCAGGTGGCACAGTGGCGGCCGCAATGTCTGCTTTCGACCCTCCAATCAGGCTCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544662.1
CDS GCA 72 bp TTGGAGGGTCGAAAGCAGACATTGCGGCCGCCACTGTaGCACCTGCAAGAATGTGTGTCCCTGAGAACAGAA +
Preference number: 6 (lower is better)
Translates to: LEGRKQTLRPPL*HLQECVSLRTE
Trigger: TTCTGTTCTCAGGGACACACATTCTTGCAGGTGGCACAGTGGCGGCCGCAATGTCTGCTTTCGACCCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544662.1
CDS TCA 72 bp CAGCGCTGGAAGGACATTTTCCTCATGTCCTCACCATaGTTTTCAGGAATACAGCCTGACCGGACGAGGGCG +
Preference number: 6 (lower is better)
Translates to: QRWKDIFLMSSP*FSGIQPDRTRA
Trigger: CGCCCTCGTCCGGTCAGGCTGTATTCCTGAAAATCATGGTGAGGACATGAGGAAAATGTCCTTCCAGCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000542167.2
ENST00000544213.5
ENST00000544662.1
CDS CAA 72 bp CGGACGAGGGCGGACACCAAGTCATCTTCAATTGTTTaGAATTGTGAGGACCCGACATTCCTCTGCATGCCG +
Preference number: 6 (lower is better)
Translates to: RTRADTKSSSIV*NCEDPTFLCMP
Trigger: CGGCATGCAGAGGAATGTCGGGTCCTCACAATTCAAAACAATTGAAGATGACTTGGTGTCCGCCCTCGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS TCA 72 bp GGCGGACACCAAGTCATCTTCAATTGTTTTGAATTGTaGGGACCCGACATTCCTCTGCATGCCGTGGTAGCC +
Preference number: 6 (lower is better)
Translates to: GGHQVIFNCFEL*GPDIPLHAVVA
Trigger: GGCTACCACGGCATGCAGAGGAATGTCGGGTCCTCACAATTCAAAACAATTGAAGATGACTTGGTGTCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000456665.6
ENST00000535067.5
ENST00000537484.1
ENST00000538037.5
ENST00000544213.5
ENST00000544662.1
CDS CAA 90 bp CAGCCTGACCGGACGAGGGCGGACACCAAGTCATCTTCAATTGTTTaGAATTGTGAGGACCCGACATTCCTCTGGAAAAAGGAGACAAAA +
Preference number: 6 (lower is better)
Translates to: QPDRTRADTKSSSIV*NCEDPTFLWKKETK
Trigger: TTTTGTCTCCTTTTTCCAGAGGAATGTCGGGTCCTCACAATTCAAAACAATTGAAGATGACTTGGTGTCCGCCCTCGTCCGGTCAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS TCA 72 bp GTCCCAGAATCCGAATGTGAGAGGGAAGGTGGCTGTTaGTCTTTTCTAGAATGTCGTCAATCAGCCACACCT +
Preference number: 6 (lower is better)
Translates to: VPESECEREGGC*SFLECRQSATP
Trigger: AGGTGTGGCTGATTGACGACATTCTAGAAAAGATCAACAGCCACCTTCCCTCTCACATTCGGATTCTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322060.9
ENST00000376649.8
ENST00000443358.6
ENST00000542167.2
CDS CAA 72 bp CGGACGAGGGCGGACACCAAGTCATCTTCAATTGTTTaGAATTGTGAGGACCCGACATTCCTCTGGAAAAAG +
Preference number: 6 (lower is better)
Translates to: RTRADTKSSSIV*NCEDPTFLWKK
Trigger: CTTTTTCCAGAGGAATGTCGGGTCCTCACAATTCAAAACAATTGAAGATGACTTGGTGTCCGCCCTCGTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS TCA 72 bp GGCGGACACCAAGTCATCTTCAATTGTTTTGAATTGTaGGGACCCGACATTCCTCTGGAAAAAGGAGACAAA +
Preference number: 6 (lower is better)
Translates to: GGHQVIFNCFEL*GPDIPLEKGDK
Trigger: TTTGTCTCCTTTTTCCAGAGGAATGTCGGGTCCTCACAATTCAAAACAATTGAAGATGACTTGGTGTCCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542167.2
CDS TCA 72 bp CCTGGACGTCTCACCTACATAAGGCGTAGGCTAGTTTaGTTTGTACATCATTATGTGCTCAGAAACAGCATA +
Preference number: 6 (lower is better)
Translates to: PGRLTYIRRRLV*FVHHYVLRNSI
Trigger: TATGCTGTTTCTGAGCACATAATGATGTACAAATCAAACTAGCCTACGCCTTATGTAGGTGAGACGTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544662.1