Pregenerated sensors for PUM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000080608

Ensembl transcript IDs: ENST00000397885.3, ENST00000490444.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GATGAAAGGTCATCCTGTCTAATGATGACTTCATGCCCAACACATTaGAACTTGATGACTGGATGTTCCCTTCTTTTCTGCATTGGGAAA	+
Preference number: 1 (lower is better) Translates to: DERSSCLMMTSCPTH*NLMTGCSLLFCIGK Trigger: TTTCCCAATGCAGAAAAGAAGGGAACATCCAGTCATCAAGTTCCAATGTGTTGGGCATGAAGTCATCATTAGACAGGATGACCTTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490444.2
3UTR GCA 90 bp	CATATTCCAAGTGATGAAAGGTCATCCTGTCTAATGATGACTTCATaGCCAACACATTGGAACTTGATGACTGGATGTTCCCTTCTTTTC	+
Preference number: 1 (lower is better) Translates to: HIPSDERSSCLMMTS*PTHWNLMTGCSLLF Trigger: GAAAAGAAGGGAACATCCAGTCATCAAGTTCCAATGTGTTGGGCATGAAGTCATCATTAGACAGGATGACCTTTCATCACTTGGAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490444.2
3UTR CCA 72 bp	TCATCCTGTCTAATGATGACTTCATGCCCAACACATTaGAACTTGATGACTGGATGTTCCCTTCTTTTCTGC	+
Preference number: 3 (lower is better) Translates to: SSCLMMTSCPTH*NLMTGCSLLFC Trigger: GCAGAAAAGAAGGGAACATCCAGTCATCAAGTTCCAATGTGTTGGGCATGAAGTCATCATTAGACAGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490444.2
3UTR CAA 72 bp	GTCATCCTGTCTAATGATGACTTCATGCCCAACACATaGGAACTTGATGACTGGATGTTCCCTTCTTTTCTG	+
Preference number: 4 (lower is better) Translates to: VILSNDDFMPNT*ELDDWMFPSFL Trigger: CAGAAAAGAAGGGAACATCCAGTCATCAAGTTCCAATGTGTTGGGCATGAAGTCATCATTAGACAGGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490444.2
CDS-3UTR GCA 90 bp	TGTCTAATGATGACTTCATGCCCAACACATTGGAACTTGATGACTGGATGTTCCCTAATGATGACTTCATaGCCAACACATTGGAACTTG	+
Preference number: 4 (lower is better) Translates to: CLMMTSCPTHWNLMTGCSLMMTS*PTHWNL Trigger: CAAGTTCCAATGTGTTGGGCATGAAGTCATCATTAG...GGAACATCCAGTCATCAAGTTCCAATGTGTTGGGCATGAAGTCATCATTAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490444.2
CDS-3UTR CAA 90 bp	AGGTCATCCTGTCTAATGATGACTTCATGCCCAACACATTGGAACTTGATGACTCCAACACATTGGAACTaGATGACTGGATGTTCCCTT	+
Preference number: 5 (lower is better) Translates to: RSSCLMMTSCPTHWNLMTPTHWN*MTGCSL Trigger: AAGGGAACATCCAGTCATCAAGTTCCAATGTGTTGG...AGTCATCAAGTTCCAATGTGTTGGGCATGAAGTCATCATTAGACAGGATGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490444.2
CDS-3UTR CAA 90 bp	TGTCTAATGATGACTTCATGCCCAACACATTGGAACTTGATGACTGGATGTTCCTTCATGCCCAACACATaGGAACTTGATGACTGGATG	+
Preference number: 5 (lower is better) Translates to: CLMMTSCPTHWNLMTGCSFMPNT*ELDDWM Trigger: CATCCAGTCATCAAGTTCCAATGTGTTGGGCATGAA...GGAACATCCAGTCATCAAGTTCCAATGTGTTGGGCATGAAGTCATCATTAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490444.2
CDS GCA 72 bp	GCAGTGCATGGCCACTCTGGCGCCATCGTGTGTGTGTaGCAGGTAGACCACCGCTTCGCGGATGGCTTCAAT	+
Preference number: 6 (lower is better) Translates to: AVHGHSGAIVCV*QVDHRFADGFN Trigger: ATTGAAGCCATCCGCGAAGCGGTGGTCTACCTGGCACACACACACGATGGCGCCAGAGTGGCCATGCACTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397885.3

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