Pregenerated sensors for PUDP (Homo sapiens)
Ensembl gene IDs: ENSG00000130021Ensembl transcript IDs: ENST00000381077.10, ENST00000412827.6, ENST00000424830.6, ENST00000438499.1, ENST00000486446.3, ENST00000655425.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTCTCTCAAGTGTCTCTTCTGCAAATCCATGCTCTTTTCTCCATaGCACTCCAGGAACAGGCAGGAAGAACCCAATCTCACAACGGGG | + |
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Preference number: 1 (lower is better) Translates to: LSLKCLFCKSMLFSP*HSRNRQEEPNLTTG Trigger: CCCCGTTGTGAGATTGGGTTCTTCCTGCCTGTTCCTGGAGTGGCATGGAGAAAAGAGCATGGATTTGCAGAAGAGACACTTGAGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| 3UTR TCA 90 bp | GGCACTCTGTGGTCCTTTGTAGATCATGTATCCTTGGAGACGTTTTaGGACATTAATGATCTCTTTGATGGAATCCATGATGGTTTTTGT | + |
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Preference number: 1 (lower is better) Translates to: GTLWSFVDHVSLETF*DINDLFDGIHDGFC Trigger: ACAAAAACCATCATGGATTCCATCAAAGAGATCATTAATGTCTCAAAACGTCTCCAAGGATACATGATCTACAAAGGACCACAGAGTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| 3UTR-3UTR CCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAACCATGAGAGTGGGCTaGGGGCGGAAGACTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VSTVKSHFINTLDWDKPTTMRVG*GRKTEA Trigger: GGCCTCAGTCTTCCGCCCCCAGCCCACTCTCATGGT...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| 3UTR-3UTR GCA 90 bp | CTCAAGTGTCTCTTCTGCAAATCCATGCTCTTTTCTCCATGCCACTCCAGGAACACGGGGACCAGAGACTaGCGCCTTACCATAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: LKCLFCKSMLFSPCHSRNTGTRD*RLTINS Trigger: AGAGTTTATGGTAAGGCGGCAGTCTCTGGTCCCCGT...GTTCCTGGAGTGGCATGGAGAAAAGAGCATGGATTTGCAGAAGAGACACTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| 3UTR-3UTR CCA 90 bp | ATGTTACAACTGGTTAAGAGGAGCATTAAAAGTGCAGACATATATTCAGGCCATACCATGAGAGTGGGCTaGGGGCGGAAGACTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: MLQLVKRSIKSADIYSGHTMRVG*GRKTEA Trigger: GGCCTCAGTCTTCCGCCCCCAGCCCACTCTCATGGT...ATGGCCTGAATATATGTCTGCACTTTTAATGCTCCTCTTAACCAGTTGTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| 3UTR-3UTR CCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAACCATGAGAGTGGGCTaGGGGCGGAAGACTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: ACNAYLHITKLIHTCIYGTMRVG*GRKTEA Trigger: GGCCTCAGTCTTCCGCCCCCAGCCCACTCTCATGGT...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| 3UTR-3UTR TCA 90 bp | GATGCAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACAATAAACTATGGATaGCGTGGCACAGAGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: DATSINSQGLSFTDNHSTTINYG*RGTESV Trigger: GACTGACTCTGTGCCACGTCATCCATAGTTTATTGT...GGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| 3UTR-3UTR TCA 90 bp | ATGTTACAACTGGTTAAGAGGAGCATTAAAAGTGCAGACATATATTCAGGCCATGCCCCTAGGAAGGGCTaGGCCACAATGAAGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: MLQLVKRSIKSADIYSGHAPRKG*ATMKQC Trigger: GCACTGCTTCATTGTGGCTCAGCCCTTCCTAGGGGC...ATGGCCTGAATATATGTCTGCACTTTTAATGCTCCTCTTAACCAGTTGTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| 3UTR-3UTR TCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAAGCGCAGGTTGGGATTaGAGAGTTGCTGATTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: VSTVKSHFINTLDWDKPTSAGWD*RVADFL Trigger: AAGGAAATCAGCAACTCTTCAATCCCAACCTGCGCT...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| 3UTR-3UTR CCA 90 bp | CAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACACGTTTCATCTTTGTTCTaGGCTTCGTTTCTGTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: QHQSIARACHSQTITPPHVSSLF*ASFLSL Trigger: TAGAGACAGAAACGAAGCCCAGAACAAAGATGAAAC...GTGTGGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| 3UTR-3UTR CCA 90 bp | CAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACACACTAACAATAAACTATaGATGACGTGGCACAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: QHQSIARACHSQTITPPHTNNKL*MTWHRV Trigger: GACTCTGTGCCACGTCATCCATAGTTTATTGTTAGT...GTGTGGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| 3UTR-3UTR TCA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAAAGCGCAGGTTGGGATTaGAGAGTTGCTGATTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQSAGWD*RVADFL Trigger: AAGGAAATCAGCAACTCTTCAATCCCAACCTGCGCT...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| 3UTR-3UTR GCA 90 bp | ATGTTACAACTGGTTAAGAGGAGCATTAAAAGTGCAGACATATATTCAGGCCATGCCACAATGAAGCAGTaGTCCTTCACTCCCGATTTC | + |
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Preference number: 2 (lower is better) Translates to: MLQLVKRSIKSADIYSGHATMKQ*SFTPDF Trigger: GAAATCGGGAGTGAAGGAGCACTGCTTCATTGTGGC...ATGGCCTGAATATATGTCTGCACTTTTAATGCTCCTCTTAACCAGTTGTAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| 3UTR-3UTR CCA 90 bp | ATGTTACAACTGGTTAAGAGGAGCATTAAAAGTGCAGACATATATTCAGGCCATATCAACACGTTAGACTaGGACAAACCAACATGGGAT | + |
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Preference number: 2 (lower is better) Translates to: MLQLVKRSIKSADIYSGHINTLD*DKPTWD Trigger: ATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGAT...ATGGCCTGAATATATGTCTGCACTTTTAATGCTCCTCTTAACCAGTTGTAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| 3UTR-3UTR CCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAATCAACACGTTAGACTaGGACAAACCAACATGGGAT | + |
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Preference number: 2 (lower is better) Translates to: ACNAYLHITKLIHTCIYGINTLD*DKPTWD Trigger: ATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGAT...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTTACAACTGGTTAAGAGGAGCATTAAAAGTGCAGACATATATTCAGGCCATACCACCGTTTTTCTCTaGCAAATCAGAGACGAATTT | + |
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Preference number: 2 (lower is better) Translates to: MLQLVKRSIKSADIYSGHTTVFL*QIRDEF Trigger: AAATTCGTCTCTGATTTGCCAGAGAAAAACGGTGGT...ATGGCCTGAATATATGTCTGCACTTTTAATGCTCCTCTTAACCAGTTGTAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| 3UTR GCA 72 bp | AAGTGTCTCTTCTGCAAATCCATGCTCTTTTCTCCATaGCACTCCAGGAACAGGCAGGAAGAACCCAATCTC | + |
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Preference number: 3 (lower is better) Translates to: KCLFCKSMLFSP*HSRNRQEEPNL Trigger: GAGATTGGGTTCTTCCTGCCTGTTCCTGGAGTGGCATGGAGAAAAGAGCATGGATTTGCAGAAGAGACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| 3UTR-3UTR CAA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGATCTCTACTGTATTTTTaGTCTCAACCGTCAAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: ACNAYLHITKLIHTCIYGSLLYF*SQPSSH Trigger: GTGACTTGACGGTTGAGACAAAAAATACAGTAGAGA...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| 3UTR-3UTR CAA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAATTCAAGTTTCATCTTaGTTCTGGGCTTCGTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: ACNAYLHITKLIHTCIYGIQVSS*FWASFL Trigger: CAGAAACGAAGCCCAGAACAAAGATGAAACTTGAAT...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| 3UTR TCA 72 bp | TGGTCCTTTGTAGATCATGTATCCTTGGAGACGTTTTaGGACATTAATGATCTCTTTGATGGAATCCATGAT | + |
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Preference number: 3 (lower is better) Translates to: WSFVDHVSLETF*DINDLFDGIHD Trigger: ATCATGGATTCCATCAAAGAGATCATTAATGTCTCAAAACGTCTCCAAGGATACATGATCTACAAAGGACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR CCA 90 bp | CAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACACGCGGGGGCGCCGCCATaGTGGCGCCTTCTGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: QHQSIARACHSQTITPPHAGAPP*WRLLGL Trigger: CAGACCCAGAAGGCGCCACCATGGCGGCGCCCCCGC...GTGTGGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| CDS-3UTR CCA 90 bp | GATGCAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCGGGGCGCCGCCATGGTaGCGCCTTCTGGGTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: DATSINSQGLSFTDNHSTGAPPW*RLLGLG Trigger: ACCCAGACCCAGAAGGCGCCACCATGGCGGCGCCCC...GGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| CDS-3UTR CCA 90 bp | CCCAATTCTGCAGGGCACTCTGTGGTCCTTTGTAGATCATGTATCCTTGGAGACCGGACCCCGAGCTGGTaGCCAGTGCAAAGGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: PNSAGHSVVLCRSCILGDRTPSW*PVQRGC Trigger: GCATCCCCTTTGCACTGGCCACCAGCTCGGGGTCCG...GTCTCCAAGGATACATGATCTACAAAGGACCACAGAGTGCCCTGCAGAATTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR TCA 90 bp | GATGCAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCCTGGGGGCGGAAGACTaGGGCCCTCCCTCTCACTCA | + |
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Preference number: 4 (lower is better) Translates to: DATSINSQGLSFTDNHSTLGAED*GPPSHS Trigger: TGAGTGAGAGGGAGGGCCTCAGTCTTCCGCCCCCAG...GGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| CDS-3UTR CCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGGGGGCGCCGCCATGGTaGCGCCTTCTGGGTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWGAPPW*RLLGLG Trigger: ACCCAGACCCAGAAGGCGCCACCATGGCGGCGCCCC...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGGGCGCCTTCTGGGTCTaGGTGGGGGCGAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWGAFWV*VGARRK Trigger: CTTCCTCCTCGCCCCCACCCAGACCCAGAAGGCGCC...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | ATAGAGAGAGATCCAGTCCCTCTCTCTCAAGTGTCTCTTCTGCAAATCCATGCTACGCGGACCCCGAGCTaGTGGCCAGTGCAAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: IERDPVPLSQVSLLQIHATRTPS*WPVQRG Trigger: TCCCCTTTGCACTGGCCACCAGCTCGGGGTCCGCGT...AGCATGGATTTGCAGAAGAGACACTTGAGAGAGAGGGACTGGATCTCTCTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR CCA 90 bp | GATGCAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACCATGAGAGTGGGCTaGGGGCGGAAGACTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: DATSINSQGLSFTDNHSTTMRVG*GRKTEA Trigger: GGCCTCAGTCTTCCGCCCCCAGCCCACTCTCATGGT...GGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| CDS-3UTR TCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGCTGGGGGCGGAAGACTaGGGCCCTCCCTCTCACTCA | + |
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Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWLGAED*GPPSHS Trigger: TGAGTGAGAGGGAGGGCCTCAGTCTTCCGCCCCCAG...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGACGCGGACCCCGAGCTaGTGGCCAGTGCAAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWTRTPS*WPVQRG Trigger: TCCCCTTTGCACTGGCCACCAGCTCGGGGTCCGCGT...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR GCA 90 bp | CTCTTTTCTCCATGCCACTCCAGGAACAGGCAGGAAGAACCCAATCTCACAACGACGGGGACCAGAGACTaGCGCCTTACCATAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: LFSPCHSRNRQEEPNLTTTGTRD*RLTINS Trigger: AGAGTTTATGGTAAGGCGGCAGTCTCTGGTCCCCGT...CGTTGTGAGATTGGGTTCTTCCTGCCTGTTCCTGGAGTGGCATGGAGAAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR CCA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAAGGCGCCTTCTGGGTCTaGGTGGGGGCGAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQGAFWV*VGARRK Trigger: CTTCCTCCTCGCCCCCACCCAGACCCAGAAGGCGCC...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAGCGGGGGCGCCGCCATaGTGGCGCCTTCTGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGAGAPP*WRLLGL Trigger: CAGACCCAGAAGGCGCCACCATGGCGGCGCCCCCGC...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAGAGTTTCTCCGCCCCTaGCATGAGCGCAGCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTEFLRP*HERSRG Trigger: CCCACGGCTGCGCTCATGCCAGGGGCGGAGAAACTC...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381077.10 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAACGCGGACCCCGAGCTaGTGGCCAGTGCAAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTTRTPS*WPVQRG Trigger: TCCCCTTTGCACTGGCCACCAGCTCGGGGTCCGCGT...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACACCTTCTGGGTCTGGGTaGGGGCGAGGAGGAAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTPSGSG*GRGGSA Trigger: CGCACTTCCTCCTCGCCCCCACCCAGACCCAGAAGG...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424830.6 |
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| CDS-3UTR TCA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAACTGGGGGCGGAAGACTaGGGCCCTCCCTCTCACTCA | + |
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Preference number: 4 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQLGAED*GPPSHS Trigger: TGAGTGAGAGGGAGGGCCTCAGTCTTCCGCCCCCAG...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR TCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGGCCCCTAGGAAGGGCTaGGCCACAATGAAGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWAPRKG*ATMKQC Trigger: GCACTGCTTCATTGTGGCTCAGCCCTTCCTAGGGGC...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| CDS-3UTR CCA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAACGGACCCCGAGCTGGTaGCCAGTGCAAAGGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQRTPSW*PVQRGC Trigger: GCATCCCCTTTGCACTGGCCACCAGCTCGGGGTCCG...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAGGCGCCTTCTGGGTCTaGGTGGGGGCGAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGGAFWV*VGARRK Trigger: CTTCCTCCTCGCCCCCACCCAGACCCAGAAGGCGCC...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | TCCAGTCCCTCTCTCTCAAGTGTCTCTTCTGCAAATCCATGCTCTTTTCTCCATGAAGATGTCCGGGTCTaGCTTGCCATGCTGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: SSPSLSSVSSANPCSFLHEDVRV*LAMLHF Trigger: GAAGTGCAGCATGGCAAGCCAGACCCGGACATCTTC...ATGGAGAAAAGAGCATGGATTTGCAGAAGAGACACTTGAGAGAGAGGGACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR CCA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAAACCATGAGAGTGGGCTaGGGGCGGAAGACTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQTMRVG*GRKTEA Trigger: GGCCTCAGTCTTCCGCCCCCAGCCCACTCTCATGGT...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR GCA 90 bp | CCAATTCTGCAGGGCACTCTGTGGTCCTTTGTAGATCATGTATCCTTGGAGACGTTTTCAACCCAATTCTaGAGGGCACTCTGTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PILQGTLWSFVDHVSLETFSTQF*RALCGP Trigger: AGGACCACAGAGTGCCCTGCAGAATTGGGTTGAAAA...CGTCTCCAAGGATACATGATCTACAAAGGACCACAGAGTGCCCTGCAGAATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR GCA 90 bp | CTCAAGTGTCTCTTCTGCAAATCCATGCTCTTTTCTCCATGCCACTCCAGGAACATGCTCTTTTCTCCATaGCACTCCAGGAACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKCLFCKSMLFSPCHSRNMLFSP*HSRNRQ Trigger: CTGCCTGTTCCTGGAGTGGCATGGAGAAAAGAGCAT...GTTCCTGGAGTGGCATGGAGAAAAGAGCATGGATTTGCAGAAGAGACACTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR CCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAGAGTTTCTCCGCCCCTaGCATGAGCGCAGCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGEFLRP*HERSRG Trigger: CCCACGGCTGCGCTCATGCCAGGGGCGGAGAAACTC...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381077.10 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | ATGTTACAACTGGTTAAGAGGAGCATTAAAAGTGCAGACATATATTCAGGCCATCGGACCCCGAGCTGGTaGCCAGTGCAAAGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MLQLVKRSIKSADIYSGHRTPSW*PVQRGC Trigger: GCATCCCCTTTGCACTGGCCACCAGCTCGGGGTCCG...ATGGCCTGAATATATGTCTGCACTTTTAATGCTCCTCTTAACCAGTTGTAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| CDS-3UTR CCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGACGGACCCCGAGCTGGTaGCCAGTGCAAAGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGRTPSW*PVQRGC Trigger: GCATCCCCTTTGCACTGGCCACCAGCTCGGGGTCCG...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR GCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACACCAGTGCAAAGGGGATaGCATGTTTCCGCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTPVQRG*HVSAGG Trigger: TCCACCTGCGGAAACATGGCATCCCCTTTGCACTGG...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAGAAGATGTCCGGGTCTaGCTTGCCATGCTGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTEDVRV*LAMLHF Trigger: GAAGTGCAGCATGGCAAGCCAGACCCGGACATCTTC...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GATGCAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCAATTCAGCACCAGGGTaGCCTTTGTTGTCAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DATSINSQGLSFTDNHSTNSAPG*PLLSDL Trigger: GAGATCTGACAACAAAGGCCACCCTGGTGCTGAATT...GGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR CCA 90 bp | CAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACACCACTCCCGATTTCCATaGCTACCACCGTTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHQSIARACHSQTITPPHHSRFP*LPPFFS Trigger: AGAGAAAAACGGTGGTAGCCATGGAAATCGGGAGTG...GTGTGGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTCAAGTGTCTCTTCTGCAAATCCATGCTCTTTTCTCCATGCCACTCCAGGCTGCAGGGCACTCTGTaGTCCTTTGTAGATCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLKCLFCKSMLFSPCHSRLQGTL*SFVDHV Trigger: TACATGATCTACAAAGGACCACAGAGTGCCCTGCAG...CCTGGAGTGGCATGGAGAAAAGAGCATGGATTTGCAGAAGAGACACTTGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR GCA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAACCAGTGCAAAGGGGATaGCATGTTTCCGCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQPVQRG*HVSAGG Trigger: TCCACCTGCGGAAACATGGCATCCCCTTTGCACTGG...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GATGCAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCTGGGACAAACCAACATaGGATGGAAACTCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DATSINSQGLSFTDNHSTWDKPT*DGNSNL Trigger: GAGATTGGAGTTTCCATCCCATGTTGGTTTGTCCCA...GGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR TCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAGCGCAGGTTGGGATTaGAGAGTTGCTGATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWSAGWD*RVADFL Trigger: AAGGAAATCAGCAACTCTTCAATCCCAACCTGCGCT...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CCA 90 bp | GATGCAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCATCAACACGTTAGACTaGGACAAACCAACATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DATSINSQGLSFTDNHSTINTLD*DKPTWD Trigger: ATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGAT...GGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR GCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGACCAGTGCAAAGGGGATaGCATGTTTCCGCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGPVQRG*HVSAGG Trigger: TCCACCTGCGGAAACATGGCATCCCCTTTGCACTGG...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CCA 90 bp | ATGTTACAACTGGTTAAGAGGAGCATTAAAAGTGCAGACATATATTCAGGCCATGAAGATGTCCGGGTCTaGCTTGCCATGCTGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLQLVKRSIKSADIYSGHEDVRV*LAMLHF Trigger: GAAGTGCAGCATGGCAAGCCAGACCCGGACATCTTC...ATGGCCTGAATATATGTCTGCACTTTTAATGCTCCTCTTAACCAGTTGTAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR CCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAAATTCAGCACCAGGGTaGCCTTTGTTGTCAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTNSAPG*PLLSDL Trigger: GAGATCTGACAACAAAGGCCACCCTGGTGCTGAATT...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGTGGGACAAACCAACATaGGATGGAAACTCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWWDKPT*DGNSNL Trigger: GAGATTGGAGTTTCCATCCCATGTTGGTTTGTCCCA...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | CAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACACACCACCGTTTTTCTCTaGCAAATCAGAGACGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: QHQSIARACHSQTITPPHTTVFL*QIRDEF Trigger: AAATTCGTCTCTGATTTGCCAGAGAAAAACGGTGGT...GTGTGGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR TCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAACAATAAACTATGGATaGCGTGGCACAGAGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTTINYG*RGTESV Trigger: GACTGACTCTGTGCCACGTCATCCATAGTTTATTGT...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381077.10 ENST00000412827.6 |
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| CDS-3UTR GCA 90 bp | CAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACACTTAGCTAACAAGGAGTaGTCATCAAAAACAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QHQSIARACHSQTITPPHLANKE*SSKTGL Trigger: AAGTCCTGTTTTTGATGAGCACTCCTTGTTAGCTAA...GTGTGGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR GCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGACTCCCCCGAAGCAGCTaGCACTATGCTTCCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGLPRSS*HYASCI Trigger: TATACAGGAAGCATAGTGGCAGCTGCTTCGGGGGAG...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGACAAACCAACATaGGATGGAAACTCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTWDKPT*DGNSNL Trigger: GAGATTGGAGTTTCCATCCCATGTTGGTTTGTCCCA...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGATCAACACGTTAGACTaGGACAAACCAACATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWINTLD*DKPTWD Trigger: ATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGAT...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR GCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAGCCACAATGAAGCAGTaGTCCTTCACTCCCGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGATMKQ*SFTPDF Trigger: GAAATCGGGAGTGAAGGAGCACTGCTTCATTGTGGC...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381077.10 |
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| CDS-3UTR CCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAATCAACACGTTAGACTaGGACAAACCAACATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTINTLD*DKPTWD Trigger: ATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGAT...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGACTAACAATAAACTATaGATGACGTGGCACAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWTNNKL*MTWHRV Trigger: GACTCTGTGCCACGTCATCCATAGTTTATTGTTAGT...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381077.10 ENST00000412827.6 |
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| CDS-3UTR CCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAAATTCAGCACCAGGGTaGCCTTTGTTGTCAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGNSAPG*PLLSDL Trigger: GAGATCTGACAACAAAGGCCACCCTGGTGCTGAATT...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR GCA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATTAGCTAACAAGGAGTaGTCATCAAAAACAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VSTVKSHFINTLDWDKPTLANKE*SSKTGL Trigger: AAGTCCTGTTTTTGATGAGCACTCCTTGTTAGCTAA...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000381077.10 ENST00000412827.6 |
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| CDS-3UTR CCA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAAACTAACAATAAACTATaGATGACGTGGCACAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQTNNKL*MTWHRV Trigger: GACTCTGTGCCACGTCATCCATAGTTTATTGTTAGT...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381077.10 ENST00000412827.6 |
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| 3UTR CAA 72 bp | TTGTTCTGGGCTTCGTTTCTGTCTCTACTGTATTTTTaGTCTCAACCGTCAAGTCACATTTTATCAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: LFWASFLSLLYF*SQPSSHILSTR Trigger: ACGTGTTGATAAAATGTGACTTGACGGTTGAGACAAAAAATACAGTAGAGACAGAAACGAAGCCCAGAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CCA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGAGTTTCATCTTTGTTCTaGGCTTCGTTTCTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ACNAYLHITKLIHTCIYGVSSLF*ASFLSL Trigger: TAGAGACAGAAACGAAGCCCAGAACAAAGATGAAAC...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CAA 90 bp | CCAATTCTGCAGGGCACTCTGTGGTCCTTTGTAGATCATGTATCCTTGGAGACGATGTCCGGGTCTGGCTaGCCATGCTGCACTTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PILQGTLWSFVDHVSLETMSGSG*PCCTSG Trigger: CCCCGAAGTGCAGCATGGCAAGCCAGACCCGGACAT...CGTCTCCAAGGATACATGATCTACAAAGGACCACAGAGTGCCCTGCAGAATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS-3UTR CAA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAATGTCCGGGTCTGGCTaGCCATGCTGCACTTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VSTVKSHFINTLDWDKPTMSGSG*PCCTSG Trigger: CCCCGAAGTGCAGCATGGCAAGCCAGACCCGGACAT...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CAA 90 bp | CAACATCAATCAATAGCCAGGGCCTGTCATTCACAGACAATCACTCCACCACACCCAGGGTGGCCTTTGTaGTCAGATCTCGGCTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QHQSIARACHSQTITPPHPGWPL*SDLGSS Trigger: ACTTGAGCCGAGATCTGACAACAAAGGCCACCCTGG...GTGTGGTGGAGTGATTGTCTGTGAATGACAGGCCCTGGCTATTGATTGATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR CAA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAAATGTCCGGGTCTGGCTaGCCATGCTGCACTTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQMSGSG*PCCTSG Trigger: CCCCGAAGTGCAGCATGGCAAGCCAGACCCGGACAT...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
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| CDS-3UTR CAA 90 bp | CGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGGCACCAGGGTGGCCTTaGTTGTCAGATCTCGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQVTFYQHVRLGQTNMGWAPGWP*LSDLGS Trigger: TGAGCCGAGATCTGACAACAAAGGCCACCCTGGTGC...CCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CAA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAAGCACCAGGGTGGCCTTaGTTGTCAGATCTCGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQAPGWP*LSDLGS Trigger: TGAGCCGAGATCTGACAACAAAGGCCACCCTGGTGC...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CAA 90 bp | GCATGTAATGCCTACCTGCATATTACCAAACTGATACACACATGTATATATGGACCAGGGTGGCCTTTGTaGTCAGATCTCGGCTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ACNAYLHITKLIHTCIYGPGWPL*SDLGSS Trigger: ACTTGAGCCGAGATCTGACAACAAAGGCCACCCTGG...TCCATATATACATGTGTGTATCAGTTTGGTAATATGCAGGTAGGCATTACATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CAA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAAATACATTCCTACGGTTaGTCCACAACTTCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQIHSYG*STTSRA Trigger: AGCTCTGGAAGTTGTGGACAAACCGTAGGAATGTAT...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381077.10 |
||
| CDS-3UTR CAA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACATCTCTACTGTATTTTTaGTCTCAACCGTCAAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSTVKSHFINTLDWDKPTSLLYF*SQPSSH Trigger: GTGACTTGACGGTTGAGACAAAAAATACAGTAGAGA...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CAA 90 bp | GTCTCAACCGTCAAGTCACATTTTATCAACACGTTAGACTGGGACAAACCAACAATTCAAGTTTCATCTTaGTTCTGGGCTTCGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSTVKSHFINTLDWDKPTIQVSS*FWASFL Trigger: CAGAAACGAAGCCCAGAACAAAGATGAAACTTGAAT...TGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGTGACTTGACGGTTGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS-3UTR CAA 90 bp | ACATTTTATCAACACGTTAGACTGGGACAAACCAACATGGGATGGAAACTCCAATCTCTACTGTATTTTTaGTCTCAACCGTCAAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TFYQHVRLGQTNMGWKLQSLLYF*SQPSSH Trigger: GTGACTTGACGGTTGAGACAAAAAATACAGTAGAGA...TTGGAGTTTCCATCCCATGTTGGTTTGTCCCAGTCTAACGTGTTGATAAAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381077.10 ENST00000412827.6 ENST00000424830.6 |
||
| CDS CCA 72 bp | AGAAGGAGGAGCGCTGAGAAGGGATCCCGGCAGCCCTaGCATTTCTGTGCGGTGAGCAGACGAGGTCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRSAEKGSRQP*HFCAVSRRGLW Trigger: CCATAGACCTCGTCTGCTCACCGCACAGAAATGCCAGGGCTGCCGGGATCCCTTCTCAGCGCTCCTCCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486446.3 |
||
| CDS TCA 72 bp | AGAAGGGATCCCGGCAGCCCTGGCATTTCTGTGCGGTaGGCAGACGAGGTCTATGGATGGAGCTCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRDPGSPGISVR*ADEVYGWSSSP Trigger: TGGAGAAGAGCTCCATCCATAGACCTCGTCTGCTCACCGCACAGAAATGCCAGGGCTGCCGGGATCCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486446.3 |
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| CDS GCA 72 bp | AGCCTCTTGAGGACTCCCCCGAAGCAGCTGCCACTATaGTTCCTGTATAACCCAGAAGAAGTCCGTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: SLLRTPPKQLPL*FLYNPEEVRPC Trigger: ACATGGACGGACTTCTTCTGGGTTATACAGGAAGCATAGTGGCAGCTGCTTCGGGGGAGTCCTCAAGAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000424830.6 |
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| CDS CAA 90 bp | CTGAATACAGCCGTTCAGTATCCGTCCACCGTGATTGTAAGCCTCTaGAGGACTCCCCCGAAGCAGCTGCCACTATGCTTCCTGTATAAC | + |
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Preference number: 6 (lower is better) Translates to: LNTAVQYPSTVIVSL*RTPPKQLPLCFLYN Trigger: GTTATACAGGAAGCATAGTGGCAGCTGCTTCGGGGGAGTCCTCAAGAGGCTTACAATCACGGTGGACGGATACTGAACGGCTGTATTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000424830.6 |
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| CDS CAA 72 bp | TATCCTTGGAGACGTTTTGAGACATTAATGATCTCTTaGATGGAATCCATGATGGTTTTTGTGCTAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: YPWRRFETLMIS*MESMMVFVLSP Trigger: GGGACTTAGCACAAAAACCATCATGGATTCCATCAAAGAGATCATTAATGTCTCAAAACGTCTCCAAGGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655425.1 |
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| CDS TCA 72 bp | AAATTTTTAGTTAAGGATTGGAAGGCTAGTACAGCATaGAGAAGTCAGGCTGGATATAAAGAAGAATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: KFLVKDWKASTA*RSQAGYKEECP Trigger: AGGACATTCTTCTTTATATCCAGCCTGACTTCTTCATGCTGTACTAGCCTTCCAATCCTTAACTAAAAATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438499.1 |
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