Pregenerated sensors for PTX3 (Homo sapiens)
Ensembl gene IDs: ENSG00000163661Ensembl transcript IDs: ENST00000295927.4
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACTaGGTTTTCAGACCTTCCCAACTGGCATGTGTTTTAAGTGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: SQLSLSLVSSVPIMH*VFRPSQLACVLSVS Trigger: ACTCACACTTAAAACACATGCCAGTTGGGAAGGTCTGAAAACTCAGTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGTTCCTATTATGCACTaGGTTTTCAGACCTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLVPIMH*VFRPSQ Trigger: TTGGGAAGGTCTGAAAACTCAGTGCATAATAGGAAC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| 3UTR-3UTR GCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCCAAGTGTTCCTATTATaGACTGAGTTTTCAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLQVFLL*TEFSDL Trigger: AAGGTCTGAAAACTCAGTGCATAATAGGAACACTTG...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| 3UTR TCA 72 bp | TTTGAGAGTTTATCTGACAGAGACACAGCATTAAACTaGAAGCACCATGGCATAAAGTCTAGTAACATTATC | + |
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Preference number: 3 (lower is better) Translates to: FESLSDRDTALN*KHHGIKSSNII Trigger: GATAATGTTACTAGACTTTATGCCATGGTGCTTTCAGTTTAATGCTGTGTCTCTGTCAGATAAACTCTCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| 3UTR CCA 72 bp | TTCCAATGTCTTTCCTTCAACTGTTTATTCAGTATTTaGCCAGTACAAATAAAGATTGGTCTCAACTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: FQCLSFNCLFSI*PVQIKIGLNSL Trigger: GAGAGAGTTGAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAGACATTGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACCGGGCAGCCCAGCCCTaGACCGCGTGCAGGTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHRAAQP*TACRSA Trigger: AGCCGACCTGCACGCGGTGCAGGGCTGGGCTGCCCG...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACGCCTCCTCTGGGCGCTaGGCCTCCGCGCCCTCCATA | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHASSGR*ASAPSI Trigger: TATGGAGGGCGCGGAGGCGCAGCGCCCAGAGGAGGC...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACCAGCCCTGCACCGCGTaGAGGTCGGCTCGCGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHQPCTA*RSARVC Trigger: GCAGACGCGAGCCGACCTGCACGCGGTGCAGGGCTG...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR TCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACCATTCCGAGTGCTCCTaGCCGCAGGCGCACGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHHSECS*PQAHGV Trigger: CACGCCGTGCGCCTGCGGTCAGGAGCACTCGGAATG...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCTCCTCCCGCAGCCTCTaGAGCTCGCCCCGCAGGACG | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLSSRSL*SSPRRT Trigger: CGTCCTGCGGGGCGAGCTGCAGAGGCTGCGGGAGGA...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGAGCACTGGTCAGCCTaGCCTCTGCGGGAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLEHWSA*PLREPP Trigger: CGGGGGCTCCCGCAGAGGCCAGGCTGACCAGTGCTC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGCGTCGCGGGTCGCCTaGAGCAGCTCGTCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLASRVA*SSSSRA Trigger: TGCTCTGGACGAGCTGCTGCAGGCGACCCGCGACGC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACAGGTCGGCTCGCGTCTaGCGCAGCTCCTCTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHRSARV*RSSSST Trigger: GGTGCTAGAGGAGCTGCGGCAGACGCGAGCCGACCT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACAGCTGTTTCACAACCTaGCGGCAGCCAGCTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHSCFTT*RQPAPG Trigger: GCCCGGAGCTGGCTGCCGGCAGGTTGTGAAACAGCT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGCTCGTCCAGAGCACTaGTCAGCCTGGCCTCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLARPEH*SAWPLR Trigger: CCGCAGAGGCCAGGCTGACCAGTGCTCTGGACGAGC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACACGTCGTCCGTGGCTTaGAGCAGCATGCGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHTSSVA*SSMRSL Trigger: GAGAGAGCGCATGCTGCTGCAAGCCACGGACGACGT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACCCTCTGAATTCCAGGTaGCGCACAGGTGGGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHPLNSR*RTGGST Trigger: GGTGGACCCACCTGTGCGGCACCTGGAATTCAGAGG...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGCAGGACGTCGTCCGTaGCTTGCAGCAGCATGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLAGRRP*LAAACA Trigger: AGCGCATGCTGCTGCAAGCCACGGACGACGTCCTGC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCCAGGTGCCGCACAGGTaGGTCCACCTTCCCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLQVPHR*VHLPRE Trigger: TTCCCTGGGAAGGTGGACCCACCTGTGCGGCACCTG...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR TCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACGAGGAGACTCTCAAGTaGGCTGAGTTTGAGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHEETLK*AEFERR Trigger: CCTCCGCTCAAACTCAGCTCACTTGAGAGTCTCCTC...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR TCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACATATTCCCCCGGATGTaGCAAGACTCTGCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHIFPRM*QDSAPP Trigger: CGGAGGAGCAGAGTCTTGTCACATCCGGGGGAATAT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACCTGAGCTCCTCCATGTaGCTGGATCTCTGTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHLSSSM*LDLCDS Trigger: GGAGTCACAGAGATCCAGCCACATGGAGGAGCTCAG...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCTGGCTTGCAGCAGCATaGGCTCTCTCATCTGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLWLAAA*ALSSAS Trigger: ACTCGCAGATGAGAGAGCGCATGCTGCTGCAAGCCA...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGCGTGGGGTCCTCAGTaGGATGGAGTCCATTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLAWGPQ*DGVHCL Trigger: TAGACAATGGACTCCATCCCACTGAGGACCCCACGC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR TCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGTGGCTGGATCTCTGTaGCTCCCCACCCAACAATAT | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLVAGSL*LPTQQY Trigger: ATATTGTTGGGTGGGGAGTCACAGAGATCCAGCCAC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACGTTCTCGGCCAACACTaGAGACCAGAGAGCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHVLGQH*RPESTK Trigger: TTTTGTGCTCTCTGGTCTGCAGTGTTGGCCGAGAAC...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACATGCGCTCTCTCATCTaGGAGTTCTCCAGCATGATG | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHMRSLI*EFSSMM Trigger: CATCATGCTGGAGAACTCGCAGATGAGAGAGCGCAT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCAGTTCTTTCCACAGCTaGCGGGAGGAGACTCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLSSFHS*REETLK Trigger: CTTGAGAGTCTCCTCCCGCCAGCTGTGGAAAGAACT...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACGGGTCCTCAGTGGGATaGAGTCCATTGTCTATTTCG | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHGSSVG*SPLSIS Trigger: CGAAATAGACAATGGACTCCATCCCACTGAGGACCC...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACAGACTCAAGCCTCATTaGTCTCACTGGATGCACGCT | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHRLKPH*SHWMHA Trigger: AGCGTGCATCCAGTGAGACCAATGAGGCTTGAGTCT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCCGCAAGGAGATGCATTaGTGGAGAGACGCAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLRKEMH*WRDAKF Trigger: GAACTTTGCGTCTCTCCAGCAATGCATCTCCTTGCG...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACAGAATCGCAAGGAGATaGATTGCTGGAGAGACGCAA | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHRIARR*IAGETQ Trigger: TTGCGTCTCTCCAGCAATGCATCTCCTTGCGATTCT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACTTTTCTTGGCCAATCTaGAGGATTCCTCCCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHFSWPI*RIPPSG Trigger: TCCTGAGGGAGGAATCCTGCAGATTGGCCAAGAAAA...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR TCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACATTTATGAAACATACTaGGCTCCTCCATGTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHIYETY*APPCGW Trigger: CCAGCCACATGGAGGAGCTCAGTATGTTTCATAAAT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACCCTCATTGGTCTCACTaGATGCACGCTTCCAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHPHWSH*MHASKN Trigger: ATTTTTGGAAGCGTGCATCCAGTGAGACCAATGAGG...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCTTCCCAGGGAAACCATaGCTTCAGCAACCAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLFPGKP*LQQPVC Trigger: ACAAACTGGTTGCTGAAGCCATGGTTTCCCTGGGAA...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACATTGGTCTCACTGGATaGACGCTTCCAAAAATCTTC | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHIGLTG*TLPKIF Trigger: GAAGATTTTTGGAAGCGTGCATCCAGTGAGACCAAT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR TCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCCTATGGATTGGTAGCTaGGATACAGCTGGATTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLLWIGS*DTAGFH Trigger: ATGAAATCCAGCTGTATCTCAGCTACCAATCCATAG...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR TCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGACACAGCATTAAACTaGAAGCACCATGGCATAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLDTALN*KHHGIK Trigger: CTTTATGCCATGGTGCTTTCAGTTTAATGCTGTGTC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCATGGATTCCTCTTTGTaGCATAGGAAAACAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLMDSSL*HRKTGW Trigger: CCATCCTGTTTTCCTATGGCACAAAGAGGAATCCAT...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCAAGGAGATGCATTGCTaGAGAGACGCAAAGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLKEMHC*RDAKFF Trigger: AAAGAACTTTGCGTCTCTCCAGCAATGCATCTCCTT...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR TCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACCCAAATTCACATACATaGGATCATAATCATCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHPNSHT*DHNHPS Trigger: ACTCGGATGATTATGATCTCATGTATGTGAATTTGG...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR GCA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACCAAGTGTTCCTATTATaGACTGAGTTTTCAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHQVFLL*TEFSDL Trigger: AAGGTCTGAAAACTCAGTGCATAATAGGAACACTTG...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCCAGCTGGATTTCATATaGATTCCTCTTTGTGCCATA | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLQLDFI*IPLCAI Trigger: TATGGCACAAAGAGGAATCCATATGAAATCCAGCTG...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| 3UTR CAA 72 bp | TTTCCAATGTCTTTCCTTCAACTGTTTATTCAGTATTaGGCCAGTACAAATAAAGATTGGTCTCAACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FPMSFLQLFIQY*ASTNKDWSQLS Trigger: AGAGAGTTGAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAGACATTGGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCTTCTTTGGCTTCAAGTaGAGTTTCACAACATTTATG | + |
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Preference number: 4 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLFFGFK*SFTTFM Trigger: CATAAATGTTGTGAAACTCCACTTGAAGCCAAAGAA...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS CCA 90 bp | TGCGGCCCGCGTCGCGGGTCGCCTGCAGCAGCTCGTCCAGAGCACTaGTCAGCCTGGCCTCTGCGGGAGCCCCCGGCGCGCACGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CGPRRGSPAAARPEH*SAWPLREPPARTAS Trigger: CGAGGCCGTGCGCGCCGGGGGCTCCCGCAGAGGCCAGGCTGACCAGTGCTCTGGACGAGCTGCTGCAGGCGACCCGCGACGCGGGCCGCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 90 bp | GGTCGCCTGCAGCAGCTCGTCCAGAGCACTGGTCAGCCTGGCCTCTaGGGGAGCCCCCGGCGCGCACGGCCTCGCCAGGCTTTCCGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRLQQLVQSTGQPGL*GSPRRARPRQAFRE Trigger: CTCGCGGAAAGCCTGGCGAGGCCGTGCGCGCCGGGGGCTCCCGCAGAGGCCAGGCTGACCAGTGCTCTGGACGAGCTGCTGCAGGCGACC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 90 bp | GCGCCCTCCATACGCGCCAGCCTGCGGCCCGCGTCGCGGGTCGCCTaGAGCAGCTCGTCCAGAGCACTGGTCAGCCTGGCCTCTGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: APSIRASLRPASRVA*SSSSRALVSLASAG Trigger: TCCCGCAGAGGCCAGGCTGACCAGTGCTCTGGACGAGCTGCTGCAGGCGACCCGCGACGCGGGCCGCAGGCTGGCGCGTATGGAGGGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CCA 90 bp | CGTCGCGGGTCGCCTGCAGCAGCTCGTCCAGAGCACTGGTCAGCCTaGCCTCTGCGGGAGCCCCCGGCGCGCACGGCCTCGCCAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRGSPAAARPEHWSA*PLREPPARTASPGF Trigger: AAAGCCTGGCGAGGCCGTGCGCGCCGGGGGCTCCCGCAGAGGCCAGGCTGACCAGTGCTCTGGACGAGCTGCTGCAGGCGACCCGCGACG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 90 bp | GCTGTTTCACAACCTGCCGGCAGCCAGCTCCGGGCAGCCCAGCCCTaGACCGCGTGCAGGTCGGCTCGCGTCTGCCGCAGCTCCTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVSQPAGSQLRAAQP*TACRSARVCRSSSS Trigger: GCTAGAGGAGCTGCGGCAGACGCGAGCCGACCTGCACGCGGTGCAGGGCTGGGCTGCCCGGAGCTGGCTGCCGGCAGGTTGTGAAACAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 90 bp | GAGTTCTCCAGCATGATGAAGAGCTTGTCCCATTCCGAGTGCTCCTaGCCGCAGGCGCACGGCGTGGGGTCCTCAGTGGGATGGAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EFSSMMKSLSHSECS*PQAHGVGSSVGWSP Trigger: TGGACTCCATCCCACTGAGGACCCCACGCCGTGCGCCTGCGGTCAGGAGCACTCGGAATGGGACAAGCTCTTCATCATGCTGGAGAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 90 bp | CGCAGGACGTCGTCCGTGGCTTGCAGCAGCATGCGCTCTCTCATCTaGGAGTTCTCCAGCATGATGAAGAGCTTGTCCCATTCCGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRTSSVACSSMRSLI*EFSSMMKSLSHSEC Trigger: GCACTCGGAATGGGACAAGCTCTTCATCATGCTGGAGAACTCGCAGATGAGAGAGCGCATGCTGCTGCAAGCCACGGACGACGTCCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 90 bp | AGCCGCCAGTTCACCATTTACCCACAAGGATGTGAGCCCTTCCTCTaGATTCCAGGTGCCGCACAGGTGGGTCCACCTTCCCAGGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRQFTIYPQGCEPFL*IPGAAQVGPPSQGN Trigger: GTTTCCCTGGGAAGGTGGACCCACCTGTGCGGCACCTGGAATTCAGAGGAAGGGCTCACATCCTTGTGGGTAAATGGTGAACTGGCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CCA 90 bp | CACAAGGATGTGAGCCCTTCCTCTGAATTCCAGGTGCCGCACAGGTaGGTCCACCTTCCCAGGGAAACCATGGCTTCAGCAACCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HKDVSPSSEFQVPHR*VHLPRETMASATSL Trigger: CAAACTGGTTGCTGAAGCCATGGTTTCCCTGGGAAGGTGGACCCACCTGTGCGGCACCTGGAATTCAGAGGAAGGGCTCACATCCTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 90 bp | CACTGCAGACCAGAGAGCACAAAACAGAATCGCAAGGAGATGCATTaGTGGAGAGACGCAAAGTTCTTTCCACAGCTGGCGGGAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HCRPESTKQNRKEMH*WRDAKFFPQLAGGD Trigger: GTCTCCTCCCGCCAGCTGTGGAAAGAACTTTGCGTCTCTCCAGCAATGCATCTCCTTGCGATTCTGTTTTGTGCTCTCTGGTCTGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 90 bp | GGCTGGATCTCTGTGACTCCCCACCCAACAATATTCCCCCGGATGTaGCAAGACTCTGCTCCTCCGGTCTCTCTTATCTCTTCATTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GWISVTPHPTIFPRM*QDSAPPVSLISSLL Trigger: TAGCAATGAAGAGATAAGAGAGACCGGAGGAGCAGAGTCTTGTCACATCCGGGGGAATATTGTTGGGTGGGGAGTCACAGAGATCCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CCA 90 bp | TGCAGACCAGAGAGCACAAAACAGAATCGCAAGGAGATGCATTGCTaGAGAGACGCAAAGTTCTTTCCACAGCTGGCGGGAGGAGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRPESTKQNRKEMHC*RDAKFFPQLAGGDS Trigger: AGAGTCTCCTCCCGCCAGCTGTGGAAAGAACTTTGCGTCTCTCCAGCAATGCATCTCCTTGCGATTCTGTTTTGTGCTCTCTGGTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 90 bp | TTCTTTTCTTGGCCAATCTGCAGGATTCCTCCCTCAGGAACAATGTaGCCTGTGGCCATCTCAACAGTGGTAGCCGCCAGTTCACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FFSWPICRIPPSGTM*PVAISTVVAASSPF Trigger: AAATGGTGAACTGGCGGCTACCACTGTTGAGATGGCCACAGGTCACATTGTTCCTGAGGGAGGAATCCTGCAGATTGGCCAAGAAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 90 bp | ACATTTATGAAACATACTGAGCTCCTCCATGTGGCTGGATCTCTGTaGCTCCCCACCCAACAATATTCCCCCGGATGTGACAAGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFMKHTELLHVAGSL*LPTQQYSPGCDKTL Trigger: CAGAGTCTTGTCACATCCGGGGGAATATTGTTGGGTGGGGAGTCACAGAGATCCAGCCACATGGAGGAGCTCAGTATGTTTCATAAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 90 bp | TGTGACTCCCCACCCAACAATATTCCCCCGGATGTGACAAGACTCTaGTCCTCCGGTCTCTCTTATCTCTTCATTGCTAAGAACACTATC | + |
|
Preference number: 5 (lower is better) Translates to: CDSPPNNIPPDVTRL*SSGLSYLFIAKNTI Trigger: GATAGTGTTCTTAGCAATGAAGAGATAAGAGAGACCGGAGGAGCAGAGTCTTGTCACATCCGGGGGAATATTGTTGGGTGGGGAGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CCA 90 bp | TGTGGCTTTGACCCAAATGCAGGCACTAAAAGACTCAAGCCTCATTaGTCTCACTGGATGCACGCTTCCAAAAATCTTCTTGGAACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CGFDPNAGTKRLKPH*SHWMHASKNLLGTH Trigger: ATGCGTTCCAAGAAGATTTTTGGAAGCGTGCATCCAGTGAGACCAATGAGGCTTGAGTCTTTTAGTGCCTGCATTTGGGTCAAAGCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGACGTCGTCCGTGGCTaGCAGCAGCATGCGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLDVVRG*QQHALS Trigger: AGAGAGCGCATGCTGCTGCAAGCCACGGACGACGTC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 90 bp | TTTCTTTGGCTTCAAGTGGAGTTTCACAACATTTATGAAACATACTaGGCTCCTCCATGTGGCTGGATCTCTGTGACTCCCCACCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: FLWLQVEFHNIYETY*APPCGWISVTPHPT Trigger: TGTTGGGTGGGGAGTCACAGAGATCCAGCCACATGGAGGAGCTCAGTATGTTTCATAAATGTTGTGAAACTCCACTTGAAGCCAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 90 bp | ATTCACATACATGAGATCATAATCATCCGAGTTCTCGGCCAACACTaGAGACCAGAGAGCACAAAACAGAATCGCAAGGAGATGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: IHIHEIIIIRVLGQH*RPESTKQNRKEMHC Trigger: GCAATGCATCTCCTTGCGATTCTGTTTTGTGCTCTCTGGTCTGCAGTGTTGGCCGAGAACTCGGATGATTATGATCTCATGTATGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 90 bp | TGGGATGGAGTCCATTGTCTATTTCGTTGTCCAAATTCACATACATaGGATCATAATCATCCGAGTTCTCGGCCAACACTGCAGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WDGVHCLFRCPNSHT*DHNHPSSRPTLQTR Trigger: TCTGGTCTGCAGTGTTGGCCGAGAACTCGGATGATTATGATCTCATGTATGTGAATTTGGACAACGAAATAGACAATGGACTCCATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS-3UTR CAA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACAAGACTCAAGCCTCATaGGTCTCACTGGATGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHKTQAS*VSLDAR Trigger: GCGTGCATCCAGTGAGACCAATGAGGCTTGAGTCTT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCAGCATGATGAAGAGCTaGTCCCATTCCGAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLSMMKS*SHSECS Trigger: GGAGCACTCGGAATGGGACAAGCTCTTCATCATGCT...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCTCGCAAGGAGATGCATaGCTGGAGAGACGCAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLSQGDA*LERRKV Trigger: AACTTTGCGTCTCTCCAGCAATGCATCTCCTTGCGA...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGCAGCCATTCTTTTCTaGGCCAATCTGCAGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLAAILF*ANLQDS Trigger: GGAATCCTGCAGATTGGCCAAGAAAAGAATGGCTGC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CAA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACACACTATCCCAGATATaGAAGCCTGTGAGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHTLSQI*KPVSLP Trigger: TGGGAGACTCACAGGCTTCAATATCTGGGATAGTGT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CAA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACAATACATCTGTGGCTTaGACCCAAATGCAGGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHNTSVA*TQMQAL Trigger: TAGTGCCTGCATTTGGGTCAAAGCCACAGATGTATT...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CAA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCGTGGGATGGAGTCCATaGTCTATTTCGTTGTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLVGWSP*SISLSK Trigger: TTTGGACAACGAAATAGACAATGGACTCCATCCCAC...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CAA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCCACAAACACTATGGATaGGTAGCTGAGATACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLHKHYG*VAEIQL Trigger: CAGCTGTATCTCAGCTACCAATCCATAGTGTTTGTG...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CAA 90 bp | AAAGATTGGTCTCAACTCTCTCTTTCATTAGTCTCAAGTGTTCCTATTATGCACGAAAACAGGATGGTTTaGTTTAATACATCTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KDWSQLSLSLVSSVPIMHENRMV*FNTSVA Trigger: AGCCACAGATGTATTAAACAAAACCATCCTGTTTTC...GTGCATAATAGGAACACTTGAGACTAATGAAAGAGAGAGTTGAGACCAATCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCCCATTGTCTATTTCGTaGTCCAAATTCACATACATG | + |
|
Preference number: 5 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLPLSIS*SKFTYM Trigger: CATGTATGTGAATTTGGACAACGAAATAGACAATGG...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS-3UTR CAA 90 bp | CTTTCCTTCAACTGTTTATTCAGTATTTGGCCAGTACAAATAAAGATTGGTCTCCTTCCAAAAATCTTCTaGGAACGCATTGGGAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSFNCLFSIWPVQIKIGLLPKIF*ERIGNK Trigger: TTTATTCCCAATGCGTTCCAAGAAGATTTTTGGAAG...GAGACCAATCTTTATTTGTACTGGCCAAATACTGAATAAACAGTTGAAGGAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS GCA 72 bp | GCCCAGCCCTGCACCGCGTGCAGGTCGGCTCGCGTCTaGCGCAGCTCCTCTAGCACCGCGGCCAGGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AQPCTACRSARV*RSSSSTAARAR Trigger: GCGCGCCCTGGCCGCGGTGCTAGAGGAGCTGCGGCAGACGCGAGCCGACCTGCACGCGGTGCAGGGCTGGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS CCA 72 bp | CGTCGCGGGTCGCCTGCAGCAGCTCGTCCAGAGCACTaGTCAGCCTGGCCTCTGCGGGAGCCCCCGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRGSPAAARPEH*SAWPLREPPAR Trigger: GCGCGCCGGGGGCTCCCGCAGAGGCCAGGCTGACCAGTGCTCTGGACGAGCTGCTGCAGGCGACCCGCGACG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS GCA 72 bp | CAGCAGCTCGTCCAGAGCACTGGTCAGCCTGGCCTCTaGGGGAGCCCCCGGCGCGCACGGCCTCGCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QQLVQSTGQPGL*GSPRRARPRQA Trigger: AGCCTGGCGAGGCCGTGCGCGCCGGGGGCTCCCGCAGAGGCCAGGCTGACCAGTGCTCTGGACGAGCTGCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CCA 72 bp | TCGCCTGCAGCAGCTCGTCCAGAGCACTGGTCAGCCTaGCCTCTGCGGGAGCCCCCGGCGCGCACGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPAAARPEHWSA*PLREPPARTAS Trigger: CGAGGCCGTGCGCGCCGGGGGCTCCCGCAGAGGCCAGGCTGACCAGTGCTCTGGACGAGCTGCTGCAGGCGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS GCA 72 bp | ATACGCGCCAGCCTGCGGCCCGCGTCGCGGGTCGCCTaGAGCAGCTCGTCCAGAGCACTGGTCAGCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: IRASLRPASRVA*SSSSRALVSLA Trigger: GGCCAGGCTGACCAGTGCTCTGGACGAGCTGCTGCAGGCGACCCGCGACGCGGGCCGCAGGCTGGCGCGTAT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS CAA 72 bp | CCTCTGCAGCTCGCCCCGCAGGACGTCGTCCGTGGCTaGCAGCAGCATGCGCTCTCTCATCTGCGAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLQLAPQDVVRG*QQHALSHLRVL Trigger: GAGAACTCGCAGATGAGAGAGCGCATGCTGCTGCAAGCCACGGACGACGTCCTGCGGGGCGAGCTGCAGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 72 bp | AGCATGATGAAGAGCTTGTCCCATTCCGAGTGCTCCTaGCCGCAGGCGCACGGCGTGGGGTCCTCAGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SMMKSLSHSECS*PQAHGVGSSVG Trigger: TCCCACTGAGGACCCCACGCCGTGCGCCTGCGGTCAGGAGCACTCGGAATGGGACAAGCTCTTCATCATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CCA 72 bp | GTGAGCCCTTCCTCTGAATTCCAGGTGCCGCACAGGTaGGTCCACCTTCCCAGGGAAACCATGGCTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VSPSSEFQVPHR*VHLPRETMASA Trigger: TGCTGAAGCCATGGTTTCCCTGGGAAGGTGGACCCACCTGTGCGGCACCTGGAATTCAGAGGAAGGGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 72 bp | TCGTCCGTGGCTTGCAGCAGCATGCGCTCTCTCATCTaGGAGTTCTCCAGCATGATGAAGAGCTTGTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSVACSSMRSLI*EFSSMMKSLSH Trigger: ATGGGACAAGCTCTTCATCATGCTGGAGAACTCGCAGATGAGAGAGCGCATGCTGCTGCAAGCCACGGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 72 bp | TCTGTGACTCCCCACCCAACAATATTCCCCCGGATGTaGCAAGACTCTGCTCCTCCGGTCTCTCTTATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVTPHPTIFPRM*QDSAPPVSLIS Trigger: AGAGATAAGAGAGACCGGAGGAGCAGAGTCTTGTCACATCCGGGGGAATATTGTTGGGTGGGGAGTCACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS TCA 72 bp | AAACATACTGAGCTCCTCCATGTGGCTGGATCTCTGTaGCTCCCCACCCAACAATATTCCCCCGGATGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: KHTELLHVAGSL*LPTQQYSPGCD Trigger: GTCACATCCGGGGGAATATTGTTGGGTGGGGAGTCACAGAGATCCAGCCACATGGAGGAGCTCAGTATGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CAA 90 bp | ACACTGCAGACCAGAGAGCACAAAACAGAATCGCAAGGAGATGCATaGCTGGAGAGACGCAAAGTTCTTTCCACAGCTGGCGGGAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TLQTREHKTESQGDA*LERRKVLSTAGGRR Trigger: TCTCCTCCCGCCAGCTGTGGAAAGAACTTTGCGTCTCTCCAGCAATGCATCTCCTTGCGATTCTGTTTTGTGCTCTCTGGTCTGCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 72 bp | CCAGAGAGCACAAAACAGAATCGCAAGGAGATGCATTaGTGGAGAGACGCAAAGTTCTTTCCACAGCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PESTKQNRKEMH*WRDAKFFPQLA Trigger: CGCCAGCTGTGGAAAGAACTTTGCGTCTCTCCAGCAATGCATCTCCTTGCGATTCTGTTTTGTGCTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 72 bp | CCACCCAACAATATTCCCCCGGATGTGACAAGACTCTaGTCCTCCGGTCTCTCTTATCTCTTCATTGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PPNNIPPDVTRL*SSGLSYLFIAK Trigger: CTTAGCAATGAAGAGATAAGAGAGACCGGAGGAGCAGAGTCTTGTCACATCCGGGGGAATATTGTTGGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CAA 72 bp | ACCAGAGAGCACAAAACAGAATCGCAAGGAGATGCATaGCTGGAGAGACGCAAAGTTCTTTCCACAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TREHKTESQGDA*LERRKVLSTAG Trigger: GCCAGCTGTGGAAAGAACTTTGCGTCTCTCCAGCAATGCATCTCCTTGCGATTCTGTTTTGTGCTCTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS CAA 72 bp | ATCAAAGCCACCACCCACACAGCAGCCATTCTTTTCTaGGCCAATCTGCAGGATTCCTCCCTCAGGAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: IKATTHTAAILF*ANLQDSSLRNN Trigger: ATTGTTCCTGAGGGAGGAATCCTGCAGATTGGCCAAGAAAAGAATGGCTGCTGTGTGGGTGGTGGCTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
||
| CDS GCA 72 bp | CATGAGATCATAATCATCCGAGTTCTCGGCCAACACTaGAGACCAGAGAGCACAAAACAGAATCGCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HEIIIIRVLGQH*RPESTKQNRKE Trigger: CTCCTTGCGATTCTGTTTTGTGCTCTCTGGTCTGCAGTGTTGGCCGAGAACTCGGATGATTATGATCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS CAA 90 bp | TCAAGCCTCATTGGTCTCACTGGATGCACGCTTCCAAAAATCTTCTaGGAACGCATTGGGAATAAAATAGCTGTTTCACAACCTGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: SSLIGLTGCTLPKIF*ERIGNKIAVSQPAG Trigger: GCCGGCAGGTTGTGAAACAGCTATTTTATTCCCAATGCGTTCCAAGAAGATTTTTGGAAGCGTGCATCCAGTGAGACCAATGAGGCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS GCA 72 bp | GCACTAAAAGACTCAAGCCTCATTGGTCTCACTGGATaGACGCTTCCAAAAATCTTCTTGGAACGCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: ALKDSSLIGLTG*TLPKIFLERIG Trigger: CCCAATGCGTTCCAAGAAGATTTTTGGAAGCGTGCATCCAGTGAGACCAATGAGGCTTGAGTCTTTTAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS TCA 72 bp | CCTCTCCACCCACCACAAACACTATGGATTGGTAGCTaGGATACAGCTGGATTTCATATGGATTCCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PLHPPQTLWIGS*DTAGFHMDSSL Trigger: CAAAGAGGAATCCATATGAAATCCAGCTGTATCTCAGCTACCAATCCATAGTGTTTGTGGTGGGTGGAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS CAA 90 bp | AGCAACCAGTTTGTTCTCCTCTCCACCCACCACAAACACTATGGATaGGTAGCTGAGATACAGCTGGATTTCATATGGATTCCTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SNQFVLLSTHHKHYG*VAEIQLDFIWIPLC Trigger: ACAAAGAGGAATCCATATGAAATCCAGCTGTATCTCAGCTACCAATCCATAGTGTTTGTGGTGGGTGGAGAGGAGAACAAACTGGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS TCA 72 bp | CTTTCTTTGGCTTCAAGTGGAGTTTCACAACATTTATaGAACATACTGAGCTCCTCCATGTGGCTGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: LSLASSGVSQHL*NILSSSMWLDL Trigger: GAGATCCAGCCACATGGAGGAGCTCAGTATGTTTCATAAATGTTGTGAAACTCCACTTGAAGCCAAAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS TCA 72 bp | GTCCATTGTCTATTTCGTTGTCCAAATTCACATACATaGGATCATAATCATCCGAGTTCTCGGCCAACACTG | + |
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Preference number: 6 (lower is better) Translates to: VHCLFRCPNSHT*DHNHPSSRPTL Trigger: CAGTGTTGGCCGAGAACTCGGATGATTATGATCTCATGTATGTGAATTTGGACAACGAAATAGACAATGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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| CDS CAA 72 bp | ATTGGTCTCACTGGATGCACGCTTCCAAAAATCTTCTaGGAACGCATTGGGAATAAAATAGCTGTTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: IGLTGCTLPKIF*ERIGNKIAVSQ Trigger: TTGTGAAACAGCTATTTTATTCCCAATGCGTTCCAAGAAGATTTTTGGAAGCGTGCATCCAGTGAGACCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295927.4 |
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