Pregenerated sensors for PTRHD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000184924Ensembl transcript IDs: ENST00000328379.6, ENST00000467797.1, ENST00000474668.1, ENST00000480190.1, ENST00000487316.1, ENST00000492046.1
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACACATaGTGCTTTGGAATGGGTGGCCTGCGTATTCAAACACATCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: VTTERREQADTARNT*CFGMGGLRIQTHQS Trigger: GCTTTGATGTGTTTGAATACGCAGGCCACCCATTCCAAAGCATCATGTGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR CCA 90 bp | GTGAATAAGAAGGAATTCAAAAGCAAAGTTTCAAACCCGAGTGACTaGAAGGGAGTTTCCTTGAGCCCCACAGGAGAGTCTAACCAAATC | + |
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Preference number: 1 (lower is better) Translates to: VNKKEFKSKVSNPSD*KGVSLSPTGESNQI Trigger: GATTTGGTTAGACTCTCCTGTGGGGCTCAAGGAAACTCCCTTCCAGTCACTCGGGTTTGAAACTTTGCTTTTGAATTCCTTCTTATTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGGAGTGCGGTGGCATGATTAGAACTGACTGTAACCTTGAACTCATGGGCATCCCCAGACAATACTaGTCTCCCACCTTCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: RLECGGMIRTDCNLELMGIPRQY*SPTFPT Trigger: AGTGGGGAAGGTGGGAGAGCAGTATTGTCTGGGGAT...GCCCATGAGTTCAAGGTTACAGTCAGTTCTAATCATGCCACCGCACTCCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCAATGATCCCCAGACAATACTGCTCTCCCACCTTCCCCACTTGAACTTAAAGACGGGAGCAAGCTaGCACTGCAAGGAACACATG | + |
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Preference number: 2 (lower is better) Translates to: LSNDPQTILLSHLPHLNLKTGAS*HCKEHM Trigger: CATGTGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTT...TAAGTTCAAGTGGGGAAGGTGGGAGAGCAGTATTGTCTGGGGATCATTGCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR-3UTR CCA 90 bp | TTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGAACACATGATGCTTTaGAATGGGTGGCCTGCGTAT | + |
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Preference number: 2 (lower is better) Translates to: LTLKKLSQLKDGSKLTLQEHMML*NGWPAY Trigger: ATACGCAGGCCACCCATTCCAAAGCATCATGTGTTC...TTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR CAA 90 bp | TTCAAAAGCAAAGTTTCAAACCCGAGTGACTGGAAGGGAGTTTCCTaGAGCCCCACAGGAGAGTCTAACCAAATCTTCTATTTGAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: FKSKVSNPSDWKGVS*SPTGESNQIFYLSN Trigger: ATTGCTCAAATAGAAGATTTGGTTAGACTCTCCTGTGGGGCTCAAGGAAACTCCCTTCCAGTCACTCGGGTTTGAAACTTTGCTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGGAATTCAAAAGCAAAGTTTCAAACCCGAGTGACTGGAAGGGAGTTTCCCTTCTATTTGAGCAATaGTCCCCAGACAATACTGCT | + |
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Preference number: 2 (lower is better) Translates to: KKEFKSKVSNPSDWKGVSLLFEQ*SPDNTA Trigger: AGCAGTATTGTCTGGGGATCATTGCTCAAATAGAAG...GGAAACTCCCTTCCAGTCACTCGGGTTTGAAACTTTGCTTTTGAATTCCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR CCA 72 bp | AAGGAATTCAAAAGCAAAGTTTCAAACCCGAGTGACTaGAAGGGAGTTTCCTTGAGCCCCACAGGAGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: KEFKSKVSNPSD*KGVSLSPTGES Trigger: AGACTCTCCTGTGGGGCTCAAGGAAACTCCCTTCCAGTCACTCGGGTTTGAAACTTTGCTTTTGAATTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR-3UTR CAA 90 bp | TTGAGCAATGATCCCCAGACAATACTGCTCTCCCACCTTCCCCACTTGAACTTATTAACCCTCAAGAAATaGTCACAACTGAAAGACGGG | + |
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Preference number: 3 (lower is better) Translates to: LSNDPQTILLSHLPHLNLLTLKK*SQLKDG Trigger: CCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAA...TAAGTTCAAGTGGGGAAGGTGGGAGAGCAGTATTGTCTGGGGATCATTGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | AGGCTGGAGTGCGGTGGCATGATTAGAACTGACTGTAACCTTGAACTCATGGGCGCCGCGGTGGCCGCGTaGCAAGCCTGCGCTACCAGT | + |
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Preference number: 4 (lower is better) Translates to: RLECGGMIRTDCNLELMGAAVAA*QACATS Trigger: ACTGGTAGCGCAGGCTTGTCACGCGGCCACCGCGGC...GCCCATGAGTTCAAGGTTACAGTCAGTTCTAATCATGCCACCGCACTCCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAGTGCGGTGGCATGATTAGAACTGACTGTAACCTTGAACTCATGGGCTGTGCAAGGCCGCGGTaGCCGCGTGACAAGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: RLECGGMIRTDCNLELMGCARPR*PRDKPA Trigger: CGCAGGCTTGTCACGCGGCCACCGCGGCCTTGCACA...GCCCATGAGTTCAAGGTTACAGTCAGTTCTAATCATGCCACCGCACTCCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | TTGAGCAATGATCCCCAGACAATACTGCTCTCCCACCTTCCCCACTTGAACTTATGCGGGTGGTCGCGGTaGGTGTGCAAGGCCGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSNDPQTILLSHLPHLNLCGWSR*VCKAAV Trigger: CACCGCGGCCTTGCACACTCACCGCGACCACCCGCA...TAAGTTCAAGTGGGGAAGGTGGGAGAGCAGTATTGTCTGGGGATCATTGCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR GCA 90 bp | ACACTGCAAGGAACACATGATGCTTTGGAATGGGTGGCCTGCGTATTCAAACACTATTGTACCAGGACCTaGGGCTCCGCCCCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLQGTHDALEWVACVFKHYCTRT*GSAPEA Trigger: GGCCTCTGGGGCGGAGCCGCAGGTCCTGGTACAATA...GTGTTTGAATACGCAGGCCACCCATTCCAAAGCATCATGTGTTCCTTGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | TTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAAGGCCGCCATCTTCCTaGCCACCCGAAAGGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: LTLKKLSQLKDGSKLTLQRPPSS*PPERPD Trigger: GTCCGGCCTTTCGGGTGGTCAGGAAGATGGCGGCCT...TTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR GCA 90 bp | TATGAACATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAAGCCTGCGCTACCAGTaGGCCCGCCGGCCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: YEHVLNPQEIVTTERREQSLRYQ*ARRPGE Trigger: TTCTCCTGGCCGGCGGGCGCACTGGTAGCGCAGGCT...TTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACATGTTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR GCA 90 bp | CTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACAGGACCACTTTGCGCATaGGCCCCAGCTCTTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LKKLSQLKDGSKLTLQGTGPLCA*APALGG Trigger: ACCTCCAAGAGCTGGGGCGCATGCGCAAAGTGGTCC...TGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR GCA 90 bp | TTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAACCTCGAGGACCACTTTaGGCATGCGCCCCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LTLKKLSQLKDGSKLTLQPRGPL*ACAPAL Trigger: AAGAGCTGGGGCGCATGCGCAAAGTGGTCCTCGAGG...TTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAGTGCGGTGGCATGATTAGAACTGACTGTAACCTTGAACTCATGGGCGCGATATTCTCTGGTTaGTCAAGCCACAGCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: RLECGGMIRTDCNLELMGAIFSG*SSHSMW Trigger: CCACATGCTGTGGCTTGAGCAACCAGAGAATATCGC...GCCCATGAGTTCAAGGTTACAGTCAGTTCTAATCATGCCACCGCACTCCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | GTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTCCAGCTCCTTTAGGGTaGTCTCATCTGGGGCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: VLNPQEIVTTERREQADTPAPLG*SHLGPR Trigger: TCGAGGCCCCAGATGAGACCACCCTAAAGGAGCTGG...AGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | CTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACAGGAAGGGAGTTTCCTTaGGCCCCACAGGAGAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LKKLSQLKDGSKLTLQGTGREFP*APQESL Trigger: TAGACTCTCCTGTGGGGCTCAAGGAAACTCCCTTCC...TGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | AAGAAGGAATTCAAAAGCAAAGTTTCAAACCCGAGTGACTGGAAGGGAGTTTCCGGCCCACTTCTTCCTTaGGGTAGGGCCGGAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KKEFKSKVSNPSDWKGVSGPLLP*GRAGEQ Trigger: TTGCTCTCCGGCCCTACCCCAAGGAAGAAGTGGGCC...GGAAACTCCCTTCCAGTCACTCGGGTTTGAAACTTTGCTTTTGAATTCCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | GTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTAAGACGGGAGCAAGCTaGCACTGCAAGGAACACATG | + |
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Preference number: 4 (lower is better) Translates to: VLNPQEIVTTERREQADTKTGAS*HCKEHM Trigger: CATGTGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTT...AGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAGTGCGGTGGCATGATTAGAACTGACTGTAACCTTGAACTCATGGGCAACTTCTTCAAATACTaGCCCACTTCTTCCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RLECGGMIRTDCNLELMGNFFKY*PTSSLG Trigger: CCCCAAGGAAGAAGTGGGCCAGTATTTGAAGAAGTT...GCCCATGAGTTCAAGGTTACAGTCAGTTCTAATCATGCCACCGCACTCCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR CAA 72 bp | GGGAGCAAGCTGACACTGCAAGGAACACATGATGCTTaGGAATGGGTGGCCTGCGTATTCAAACACATCAAA | + |
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Preference number: 4 (lower is better) Translates to: GSKLTLQGTHDA*EWVACVFKHIK Trigger: TTTGATGTGTTTGAATACGCAGGCCACCCATTCCAAAGCATCATGTGTTCCTTGCAGTGTCAGCTTGCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | AGGCTGGAGTGCGGTGGCATGATTAGAACTGACTGTAACCTTGAACTCATGGGCCTTCTATTTGAGCAATaGTCCCCAGACAATACTGCT | + |
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Preference number: 4 (lower is better) Translates to: RLECGGMIRTDCNLELMGLLFEQ*SPDNTA Trigger: AGCAGTATTGTCTGGGGATCATTGCTCAAATAGAAG...GCCCATGAGTTCAAGGTTACAGTCAGTTCTAATCATGCCACCGCACTCCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR GCA 90 bp | TTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAATCCCCAGACAATACTaGTCTCCCACCTTCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: LTLKKLSQLKDGSKLTLQIPRQY*SPTFPT Trigger: AGTGGGGAAGGTGGGAGAGCAGTATTGTCTGGGGAT...TTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR GCA 90 bp | ATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACATTGCCCAGGCTGGAGTaGGGTGGCATGATTAGAACT | + |
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Preference number: 4 (lower is better) Translates to: MCLTLKKLSQLKDGSKLTLPRLE*GGMIRT Trigger: AGTTCTAATCATGCCACCGCACTCCAGCCTGGGCAA...TGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | TTGAGCAATGATCCCCAGACAATACTGCTCTCCCACCTTCCCCACTTGAACTTATCAAGCCACAGCATGTaGTCAATGTTCTTCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSNDPQTILLSHLPHLNLSSHSM*SMFFCC Trigger: GCAACAGAAGAACATTGACCACATGCTGTGGCTTGA...TAAGTTCAAGTGGGGAAGGTGGGAGAGCAGTATTGTCTGGGGATCATTGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | ATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACAAGTGGCGATATTCTCTaGTTGCTCAAGCCACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: MCLTLKKLSQLKDGSKLTSGDIL*LLKPQH Trigger: ATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACT...TGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | CTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACAGGAGAGCAATACAAGTaGCGATATTCTCTGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LKKLSQLKDGSKLTLQGTGEQYK*RYSLVA Trigger: AGCAACCAGAGAATATCGCCACTTGTATTGCTCTCC...TGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | GTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTCATGATGCTTTGGAATaGGTGGCCTGCGTATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VLNPQEIVTTERREQADTHDALE*VACVFK Trigger: TTTGAATACGCAGGCCACCCATTCCAAAGCATCATG...AGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | ATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACAGAACACATGATGCTTTaGAATGGGTGGCCTGCGTAT | + |
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Preference number: 4 (lower is better) Translates to: MCLTLKKLSQLKDGSKLTEHMML*NGWPAY Trigger: ATACGCAGGCCACCCATTCCAAAGCATCATGTGTTC...TGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | AAGAAGGAATTCAAAAGCAAAGTTTCAAACCCGAGTGACTGGAAGGGAGTTTCCAGTTTCAAACCCGAGTaGCTGGAAGGGAGTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KKEFKSKVSNPSDWKGVSSFKPE*LEGSFL Trigger: AAGGAAACTCCCTTCCAGTCACTCGGGTTTGAAACT...GGAAACTCCCTTCCAGTCACTCGGGTTTGAAACTTTGCTTTTGAATTCCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | ATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACAATGCTTTGGAATGGGTaGCCTGCGTATTCAAACACA | + |
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Preference number: 4 (lower is better) Translates to: MCLTLKKLSQLKDGSKLTMLWNG*PAYSNT Trigger: TGTGTTTGAATACGCAGGCCACCCATTCCAAAGCAT...TGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | TATGAACATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAATCAAACCCGAGTGACTaGAAGGGAGTTTCCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: YEHVLNPQEIVTTERREQSNPSD*KGVSLS Trigger: GCTCAAGGAAACTCCCTTCCAGTCACTCGGGTTTGA...TTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACATGTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | CTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACAACCAAATCTTCTATTTaGGCAATGATCCCCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: LKKLSQLKDGSKLTLQGTTKSSI*AMIPRQ Trigger: TTGTCTGGGGATCATTGCTCAAATAGAAGATTTGGT...TGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR TCA 90 bp | ATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACAAAAGCAGCAGTTACTTaGACAATCGGAACTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: MCLTLKKLSQLKDGSKLTKAAVT*TIGTSS Trigger: TGAAGAAGTTCCGATTGTTCAAGTAACTGCTGCTTT...TGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CCA 90 bp | TTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAATGTGAGCCACCACACTaGCCAAATTTTAACATCTTT | + |
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Preference number: 4 (lower is better) Translates to: LTLKKLSQLKDGSKLTLQCEPPH*PNFNIF Trigger: AAAGATGTTAAAATTTGGCCAGTGTGGTGGCTCACA...TTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| 3UTR CAA 72 bp | AACTTTAATATGAACATGTGCTTAACCCTCAAGAAATaGTCACAACTGAAAGACGGGAGCAAGCTGACACTG | + |
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Preference number: 4 (lower is better) Translates to: NFNMNMCLTLKK*SQLKDGSKLTL Trigger: CAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACATGTTCATATTAAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS CCA 90 bp | AAGCGGCTGTGTGCGGGTGGTCGCGGTGAGTGTGCAAGGCCGCGGTaGCCGCGTGACAAGCCTGCGCTACCAGTGCGCCCGCCGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KRLCAGGRGECARPR*PRDKPALPVRPPAR Trigger: CCTGGCCGGCGGGCGCACTGGTAGCGCAGGCTTGTCACGCGGCCACCGCGGCCTTGCACACTCACCGCGACCACCCGCACACAGCCGCTT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS GCA 90 bp | ACAGGAGCCACCACTTTACCGCGAGCCCAGCAGGGGGCGGAGGACTaGTGTCCACTCTTCACACAGTCAGGCCCTTCCCAAGGGCGCACC | + |
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Preference number: 5 (lower is better) Translates to: TGATTLPRAQQGAED*CPLFTQSGPSQGRT Trigger: GGTGCGCCCTTGGGAAGGGCCTGACTGTGTGAAGAGTGGACAGCAGTCCTCCGCCCCCTGCTGGGCTCGCGGTAAAGTGGTGGCTCCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 ENST00000492046.1 |
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| CDS CCA 90 bp | TTTGCACTGTCCCTTCGGGCTCGGTTTTGCAGGAGGACAGCACTTTaGGGCATGGCTTTAAAAAGTCGGCCAGTGCACAGGCGGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: FALSLRARFCRRTAL*GMALKSRPVHRRNS Trigger: GCTGTTCCGCCTGTGCACTGGCCGACTTTTTAAAGCCATGCCCCAAAGTGCTGTCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 ENST00000492046.1 |
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| CDS-3UTR CAA 90 bp | CTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACAGCCTCGAGGACCACTTaGCGCATGCGCCCCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LKKLSQLKDGSKLTLQGTASRTT*RMRPSS Trigger: AGAGCTGGGGCGCATGCGCAAAGTGGTCCTCGAGGC...TGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS CCA 90 bp | ACTGGCCCACTTCTTCCTTGGGGTAGGGCCGGAGAGCAATACAAGTaGCGATATTCTCTGGTTGCTCAAGCCACAGCATGTGGTCAATGT | + |
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Preference number: 5 (lower is better) Translates to: TGPLLPWGRAGEQYK*RYSLVAQATACGQC Trigger: ACATTGACCACATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACTTGTATTGCTCTCCGGCCCTACCCCAAGGAAGAAGTGGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS-3UTR CAA 90 bp | GTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACACTCATGCGCCCCAGCTCTaGGAGGTAAGCGGCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: VLNPQEIVTTERREQADTHAPQL*EVSGCV Trigger: CACACAGCCGCTTACCTCCAAGAGCTGGGGCGCATG...AGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS CCA 90 bp | GCAATACAAGTGGCGATATTCTCTGGTTGCTCAAGCCACAGCATGTaGTCAATGTTCTTCTGTTGCAGGGTCTCGGCCAGCTCCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: AIQVAIFSGCSSHSM*SMFFCCRVSASSFR Trigger: CCTAAAGGAGCTGGCCGAGACCCTGCAACAGAAGAACATTGACCACATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACTTGTATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CCA 90 bp | TTCCTTGGGGTAGGGCCGGAGAGCAATACAAGTGGCGATATTCTCTaGTTGCTCAAGCCACAGCATGTGGTCAATGTTCTTCTGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: FLGVGPESNTSGDIL*LLKPQHVVNVLLLQ Trigger: CTGCAACAGAAGAACATTGACCACATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACTTGTATTGCTCTCCGGCCCTACCCCAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS-3UTR CAA 90 bp | TCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACACATGATGCTTTGGGCGATATTCTCTGGTaGCTCAAGCCACAGCATGTG | + |
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Preference number: 5 (lower is better) Translates to: SQLKDGSKLTLQGTHDALGDILW*LKPQHV Trigger: CACATGCTGTGGCTTGAGCAACCAGAGAATATCGCC...CAAAGCATCATGTGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CAA 90 bp | ATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGCTGACATGGAAGGGAGTTTCCTaGAGCCCCACAGGAGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: MCLTLKKLSQLKDGSKLTWKGVS*SPTGES Trigger: AGACTCTCCTGTGGGGCTCAAGGAAACTCCCTTCCA...TGTCAGCTTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CAA 90 bp | AAGAAGGAATTCAAAAGCAAAGTTTCAAACCCGAGTGACTGGAAGGGAGTTTCCGTCAATGTTCTTCTGTaGCAGGGTCTCGGCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: KKEFKSKVSNPSDWKGVSVNVLL*QGLGQL Trigger: GAGCTGGCCGAGACCCTGCAACAGAAGAACATTGAC...GGAAACTCCCTTCCAGTCACTCGGGTTTGAAACTTTGCTTTTGAATTCCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CAA 90 bp | AGGCTGGAGTGCGGTGGCATGATTAGAACTGACTGTAACCTTGAACTCATGGGCTCCCACCTTCCCCACTaGAACTTATTAATAAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RLECGGMIRTDCNLELMGSHLPH*NLLIRG Trigger: TCCTCTTATTAATAAGTTCAAGTGGGGAAGGTGGGA...GCCCATGAGTTCAAGGTTACAGTCAGTTCTAATCATGCCACCGCACTCCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS TCA 90 bp | GAATGGGTGGCCTGCGTATTCAAACACATCAAAGCAGCAGTTACTTaGACAATCGGAACTTCTTCAAATACTGGCCCACTTCTTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: EWVACVFKHIKAAVT*TIGTSSNTGPLLPW Trigger: CCAAGGAAGAAGTGGGCCAGTATTTGAAGAAGTTCCGATTGTTCAAGTAACTGCTGCTTTGATGTGTTTGAATACGCAGGCCACCCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS-3UTR CAA 90 bp | TCACAACTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACACATGATGCTTTGCAAAGCAGCAGTTACTaGAACAATCGGAACTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SQLKDGSKLTLQGTHDALQSSSY*NNRNFF Trigger: GAAGAAGTTCCGATTGTTCAAGTAACTGCTGCTTTG...CAAAGCATCATGTGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAGTTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CAA 90 bp | TATGAACATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAAGGAACACATGATGCTTaGGAATGGGTGGCCTGCGTA | + |
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Preference number: 5 (lower is better) Translates to: YEHVLNPQEIVTTERREQGTHDA*EWVACV Trigger: TACGCAGGCCACCCATTCCAAAGCATCATGTGTTCC...TTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACATGTTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS TCA 90 bp | TTATTTTCAAATAATTTGGCGTCCTACCCAGGTAAATACTCAGTTTaGCTTCACTTTGCACTGTCCCTTCGGGCTCGGTTTTGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LFSNNLASYPGKYSV*LHFALSLRARFCRR Trigger: CCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTATTTACCTGGGTAGGACGCCAAATTATTTGAAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000487316.1 ENST00000492046.1 |
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| CDS-3UTR CAA 90 bp | ACACTGCAAGGAACACATGATGCTTTGGAATGGGTGGCCTGCGTATTCAAACACAACCAAATCTTCTATTaGAGCAATGATCCCCAGACA | + |
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Preference number: 5 (lower is better) Translates to: TLQGTHDALEWVACVFKHNQIFY*SNDPQT Trigger: TGTCTGGGGATCATTGCTCAAATAGAAGATTTGGTT...GTGTTTGAATACGCAGGCCACCCATTCCAAAGCATCATGTGTTCCTTGCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS-3UTR CAA 90 bp | TATGAACATGTGCTTAACCCTCAAGAAATTGTCACAACTGAAAGACGGGAGCAATTAACCCTCAAGAAATaGTCACAACTGAAAGACGGG | + |
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Preference number: 5 (lower is better) Translates to: YEHVLNPQEIVTTERREQLTLKK*SQLKDG Trigger: CCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAA...TTGCTCCCGTCTTTCAGTTGTGACAATTTCTTGAGGGTTAAGCACATGTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS CCA 72 bp | TGTGCGGGTGGTCGCGGTGAGTGTGCAAGGCCGCGGTaGCCGCGTGACAAGCCTGCGCTACCAGTGCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: CAGGRGECARPR*PRDKPALPVRP Trigger: CGGGCGCACTGGTAGCGCAGGCTTGTCACGCGGCCACCGCGGCCTTGCACACTCACCGCGACCACCCGCACA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS CAA 72 bp | GGCCTCGAGGACCACTTTGCGCATGCGCCCCAGCTCTaGGAGGTAAGCGGCTGTGTGCGGGTGGTCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GLEDHFAHAPQL*EVSGCVRVVAV Trigger: CACCGCGACCACCCGCACACAGCCGCTTACCTCCAAGAGCTGGGGCGCATGCGCAAAGTGGTCCTCGAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS CAA 90 bp | CTCATCTGGGGCCTCGAGGACCACTTTGCGCATGCGCCCCAGCTCTaGGAGGTAAGCGGCTGTGTGCGGGTGGTCGCGGTGAGTGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: LIWGLEDHFAHAPQL*EVSGCVRVVAVSVQ Trigger: TTGCACACTCACCGCGACCACCCGCACACAGCCGCTTACCTCCAAGAGCTGGGGCGCATGCGCAAAGTGGTCCTCGAGGCCCCAGATGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS GCA 72 bp | TGGTCTCATCTGGGGCCTCGAGGACCACTTTGCGCATaGGCCCCAGCTCTTGGAGGTAAGCGGCTGTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: WSHLGPRGPLCA*APALGGKRLCA Trigger: CGCACACAGCCGCTTACCTCCAAGAGCTGGGGCGCATGCGCAAAGTGGTCCTCGAGGCCCCAGATGAGACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS CCA 72 bp | TCTTCTGTTGCAGGGTCTCGGCCAGCTCCTTTAGGGTaGTCTCATCTGGGGCCTCGAGGACCACTTTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SSVAGSRPAPLG*SHLGPRGPLCA Trigger: TGCGCAAAGTGGTCCTCGAGGCCCCAGATGAGACCACCCTAAAGGAGCTGGCCGAGACCCTGCAACAGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328379.6 |
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| CDS CCA 72 bp | TCCCTTCGGGCTCGGTTTTGCAGGAGGACAGCACTTTaGGGCATGGCTTTAAAAAGTCGGCCAGTGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: SLRARFCRRTAL*GMALKSRPVHR Trigger: CCTGTGCACTGGCCGACTTTTTAAAGCCATGCCCCAAAGTGCTGTCCTCCTGCAAAACCGAGCCCGAAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 ENST00000492046.1 |
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| CDS CCA 72 bp | CTTCTTCCTTGGGGTAGGGCCGGAGAGCAATACAAGTaGCGATATTCTCTGGTTGCTCAAGCCACAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: LLPWGRAGEQYK*RYSLVAQATAC Trigger: ACATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACTTGTATTGCTCTCCGGCCCTACCCCAAGGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CAA 72 bp | TCTGGGGCCCAGGTAAATACTCAGTTTGACTTCACTTaGCACTGTCCCTTCGGGCTCGGTTTTGCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGAQVNTQFDFT*HCPFGLGFAGG Trigger: TCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTATTTACCTGGGCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474668.1 |
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| CDS CAA 90 bp | CTTGGGGTAGGGCCGGAGAGCAATACAAGTGGCGATATTCTCTGGTaGCTCAAGCCACAGCATGTGGTCAATGTTCTTCTGTTGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LGVGPESNTSGDILW*LKPQHVVNVLLLQG Trigger: ACCCTGCAACAGAAGAACATTGACCACATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACTTGTATTGCTCTCCGGCCCTACCCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CAA 90 bp | GTGGTCTCATCTGGGGCCCAGGTAAATACTCAGTTTGACTTCACTTaGCACTGTCCCTTCGGGCTCGGTTTTGCAGGAGGACAGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: VVSSGAQVNTQFDFT*HCPFGLGFAGGQHF Trigger: AAAGTGCTGTCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTATTTACCTGGGCCCCAGATGAGACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474668.1 |
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| CDS CAA 90 bp | ATACTCAGTTTGACTTCACTTTGCACTGTCCCTTCGGGCTCGGTTTaGCAGGAGGACAGCACTTTGGGGCATGGCTTTAAAAAGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: ILSLTSLCTVPSGSV*QEDSTLGHGFKKSA Trigger: GGCCGACTTTTTAAAGCCATGCCCCAAAGTGCTGTCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 ENST00000492046.1 |
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| CDS CAA 72 bp | GGGCCGGAGAGCAATACAAGTGGCGATATTCTCTGGTaGCTCAAGCCACAGCATGTGGTCAATGTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GPESNTSGDILW*LKPQHVVNVLL Trigger: CAGAAGAACATTGACCACATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACTTGTATTGCTCTCCGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CAA 72 bp | TTGACTTCACTTTGCACTGTCCCTTCGGGCTCGGTTTaGCAGGAGGACAGCACTTTGGGGCATGGCTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: LTSLCTVPSGSV*QEDSTLGHGFK Trigger: TTTAAAGCCATGCCCCAAAGTGCTGTCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 ENST00000492046.1 |
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| CDS CAA 72 bp | CGTCCTACCCAGGTAAATACTCAGTTTGACTTCACTTaGCACTGTCCCTTCGGGCTCGGTTTTGCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RPTQVNTQFDFT*HCPFGLGFAGG Trigger: TCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTATTTACCTGGGTAGGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487316.1 ENST00000492046.1 |
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| CDS GCA 72 bp | GGCCGGAGAGCAATACAAGTGGCGATATTCTCTGGTTaGTCAAGCCACAGCATGTGGTCAATGTTCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GRRAIQVAIFSG*SSHSMWSMFFC Trigger: ACAGAAGAACATTGACCACATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACTTGTATTGCTCTCCGGCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CCA 72 bp | GTAGGGCCGGAGAGCAATACAAGTGGCGATATTCTCTaGTTGCTCAAGCCACAGCATGTGGTCAATGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VGPESNTSGDIL*LLKPQHVVNVL Trigger: AAGAACATTGACCACATGCTGTGGCTTGAGCAACCAGAGAATATCGCCACTTGTATTGCTCTCCGGCCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CCA 72 bp | ATCGGAACTTCTTCAAATACTGGCCCACTTCTTCCTTaGGGTAGGGCCGGAGAGCAATACAAGTGGCGATAT | + |
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Preference number: 6 (lower is better) Translates to: IGTSSNTGPLLP*GRAGEQYKWRY Trigger: ATATCGCCACTTGTATTGCTCTCCGGCCCTACCCCAAGGAAGAAGTGGGCCAGTATTTGAAGAAGTTCCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CAA 90 bp | CTGAAAGACGGGAGCAAGCTGACACTGCAAGGAACACATGATGCTTaGGAATGGGTGGCCTGCGTATTCAAACACATCAAAGCAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LKDGSKLTLQGTHDA*EWVACVFKHIKAAV Trigger: AACTGCTGCTTTGATGTGTTTGAATACGCAGGCCACCCATTCCAAAGCATCATGTGTTCCTTGCAGTGTCAGCTTGCTCCCGTCTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CAA 72 bp | CTACATCTCCAGGTAAATACTCAGTTTGACTTCACTTaGCACTGTCCCTTCGGGCTCGGTTTTGCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LHLQVNTQFDFT*HCPFGLGFAGG Trigger: TCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTATTTACCTGGAGATGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480190.1 |
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| CDS CAA 90 bp | ATAATTTGGCGTCCTACCCAGGTAAATACTCAGTTTGACTTCACTTaGCACTGTCCCTTCGGGCTCGGTTTTGCAGGAGGACAGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: IIWRPTQVNTQFDFT*HCPFGLGFAGGQHF Trigger: AAAGTGCTGTCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTATTTACCTGGGTAGGACGCCAAATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487316.1 ENST00000492046.1 |
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| CDS CAA 90 bp | TTTCTTAGGCTACATCTCCAGGTAAATACTCAGTTTGACTTCACTTaGCACTGTCCCTTCGGGCTCGGTTTTGCAGGAGGACAGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: FLRLHLQVNTQFDFT*HCPFGLGFAGGQHF Trigger: AAAGTGCTGTCCTCCTGCAAAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTATTTACCTGGAGATGTAGCCTAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480190.1 |
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| CDS CAA 90 bp | GGAATGGGTGGCCTGCGTATTCAAACACATCAAAGCAGCAGTTACTaGAACAATCGGAACTTCTTCAAATACTGGCCCACTTCTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GMGGLRIQTHQSSSY*NNRNFFKYWPTSSL Trigger: CAAGGAAGAAGTGGGCCAGTATTTGAAGAAGTTCCGATTGTTCAAGTAACTGCTGCTTTGATGTGTTTGAATACGCAGGCCACCCATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS TCA 72 bp | AATAATTTGGCGTCCTACCCAGGTAAATACTCAGTTTaGCTTCACTTTGCACTGTCCCTTCGGGCTCGGTTT | + |
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Preference number: 6 (lower is better) Translates to: NNLASYPGKYSV*LHFALSLRARF Trigger: AAACCGAGCCCGAAGGGACAGTGCAAAGTGAAGTCAAACTGAGTATTTACCTGGGTAGGACGCCAAATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000487316.1 ENST00000492046.1 |
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| CDS CAA 72 bp | GGCCTGCGTATTCAAACACATCAAAGCAGCAGTTACTaGAACAATCGGAACTTCTTCAAATACTGGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: GLRIQTHQSSSY*NNRNFFKYWPT Trigger: AGTGGGCCAGTATTTGAAGAAGTTCCGATTGTTCAAGTAACTGCTGCTTTGATGTGTTTGAATACGCAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000328379.6 ENST00000467797.1 ENST00000474668.1 ENST00000480190.1 ENST00000487316.1 |
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| CDS CAA 90 bp | TTCAAAACCATAAGGGCTCCCATGAATATCCTTGTGCAAAGCTCTTaGGGTGCATCTGATTATTTTCTTAGGCTACATCTCTGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FKTIRAPMNILVQSS*GASDYFLRLHLWCL Trigger: CAGGCACCAGAGATGTAGCCTAAGAAAATAATCAGATGCACCCAAAGAGCTTTGCACAAGGATATTCATGGGAGCCCTTATGGTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492046.1 |
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| CDS CAA 72 bp | ATAAGGGCTCCCATGAATATCCTTGTGCAAAGCTCTTaGGGTGCATCTGATTATTTTCTTAGGCTACATCTC | + |
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Preference number: 6 (lower is better) Translates to: IRAPMNILVQSS*GASDYFLRLHL Trigger: GAGATGTAGCCTAAGAAAATAATCAGATGCACCCAAAGAGCTTTGCACAAGGATATTCATGGGAGCCCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000480190.1 ENST00000487316.1 ENST00000492046.1 |
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| CDS CAA 72 bp | CAGGATAGAGAGTCAAAGGGTAAGGGTGAGATTTGTTaGGTCATCTGCAAACAGAACCTGACTGCTATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QDRESKGKGEIC*VICKQNLTAIL Trigger: TAAAATAGCAGTCAGGTTCTGTTTGCAGATGACCAAACAAATCTCACCCTTACCCTTTGACTCTCTATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487316.1 |
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| CDS CAA 90 bp | TTCAAAACCATAAGGGCTCCCATGAATATCCTTGTGCAAAGCTCTTaGGGTGCATCTGATTATTTTCTTAGGCTACATCTCCAGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: FKTIRAPMNILVQSS*GASDYFLRLHLQVN Trigger: ATTTACCTGGAGATGTAGCCTAAGAAAATAATCAGATGCACCCAAAGAGCTTTGCACAAGGATATTCATGGGAGCCCTTATGGTTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480190.1 |
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