RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRS (Homo sapiens)

Ensembl gene IDs: ENSG00000105426

Ensembl transcript IDs: ENST00000262963.10, ENST00000586065.1, ENST00000587303.5, ENST00000588012.5, ENST00000588552.5, ENST00000589851.1, ENST00000590509.5, ENST00000591760.5, ENST00000592099.5

Found 653 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCGAGGGGCTGCGTCGTCCTCGGAAATGGTGCAGAAACACAGCTaGTGCCGCTGCCACCTCCTGCCCTGCCCACTGGGGGTCCAGGCC +
Preference number: 1 (lower is better)
Translates to: ARGAASSSEMVQKHS*CRCHLLPCPLGVQA
Trigger: GGCCTGGACCCCCAGTGGGCAGGGCAGGAGGTGGCAGCGGCAGCAGCTGTGTTTCTGCACCATTTCCGAGGACGACGCAGCCCCTCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
3UTR GCA 90 bp CCCACCCCGGAATCTGGTTTTGGAATTGGAAGGAAAGGAGGAATGTaGCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGG +
Preference number: 1 (lower is better)
Translates to: PTPESGFGIGRKGGM*QVFEGGGRCQGGRW
Trigger: CCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCTTCCAATTCCAAAACCAGATTCCGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587303.5
3UTR-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCCGCTGCCACCTCCTaGCCTGCCCACTGGGGGTCC +
Preference number: 2 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAAATS*PAHWGS
Trigger: GGACCCCCAGTGGGCAGGGCAGGAGGTGGCAGCGGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
3UTR-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCCACCTCCTGCCCTaGCCACTGGGGGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACHLLP*PLGVQA
Trigger: GGCCTGGACCCCCAGTGGGCAGGGCAGGAGGTGGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
3UTR-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCCGCTGCCACCTCCTaGCCTGCCCACTGGGGGTCC +
Preference number: 2 (lower is better)
Translates to: GKEECAKYLKAAAGAREVAAATS*PAHWGS
Trigger: GGACCCCCAGTGGGCAGGGCAGGAGGTGGCAGCGGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
3UTR-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGGGCTCGAGGGGCTaGGTCGTCCTCGGAAATGGT +
Preference number: 2 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGGSRG*VVLGNG
Trigger: ACCATTTCCGAGGACGACGCAGCCCCTCGAGCCCCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
3UTR-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAGAAACACAGCTGCTaGCGCTGCCACCTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQKHSC*RCHLLP
Trigger: GGGCAGGAGGTGGCAGCGGCAGCAGCTGTGTTTCTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
3UTR-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTGCCACCTCCTGCCCTaGCCACTGGGGGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGCHLLP*PLGVQA
Trigger: GGCCTGGACCCCCAGTGGGCAGGGCAGGAGGTGGCA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
3UTR-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTGCAGAAACACAGCTaGTGCCGCTGCCACCTCCTG +
Preference number: 2 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVQKHS*CRCHLL
Trigger: CAGGAGGTGGCAGCGGCAGCAGCTGTGTTTCTGCAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
3UTR-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGTCCTCGGAAATGGTaGAGAAACACAGCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARPRKW*RNTAAA
Trigger: GGCAGCAGCTGTGTTTCTGCACCATTTCCGAGGACG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
3UTR-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGTGCAGAAACACAGCTaGTGCCGCTGCCACCTCCTG +
Preference number: 2 (lower is better)
Translates to: GKEECAKYLKAAAGAREVVQKHS*CRCHLL
Trigger: CAGGAGGTGGCAGCGGCAGCAGCTGTGTTTCTGCAC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
3UTR-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGTCGTCCTCGGAAATaGTGCAGAAACACAGCTGCT +
Preference number: 2 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARRPRK*CRNTAA
Trigger: AGCAGCTGTGTTTCTGCACCATTTCCGAGGACGACG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
3UTR-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCGTCCTCGGAAATGGTaGAGAAACACAGCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRPRKW*RNTAAA
Trigger: GGCAGCAGCTGTGTTTCTGCACCATTTCCGAGGACG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
3UTR-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGTCGTCCTCGGAAATaGTGCAGAAACACAGCTGCT +
Preference number: 2 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRRPRK*CRNTAA
Trigger: AGCAGCTGTGTTTCTGCACCATTTCCGAGGACGACG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
3UTR-3UTR TCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAGTAGGCGCTGGGCCCTaGGACTGTTACTGGTTGGAT +
Preference number: 2 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRVGAGP*DCYWLD
Trigger: ATCCAACCAGTAACAGTCTCAGGGCCCAGCGCCTAC...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
3UTR-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGAATGTGCCAAGTATTaGAAGGCGGCGGCCGGTGCC +
Preference number: 3 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPECAKY*KAAAGA
Trigger: GGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
3UTR TCA 72 bp TCTGCACATCAATTACCTTTCTCGCTTGAACCCATCTaGGTTGGATCAGCCTTTTGTCATCAGAAGCACATG +
Preference number: 3 (lower is better)
Translates to: SAHQLPFSLEPI*VGSAFCHQKHM
Trigger: CATGTGCTTCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATTGATGTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCTCGCCTGTGCGGGTaGCCACGGACTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAARLCG*PRTRWG
Trigger: CCCCCAGCGAGTCCGTGGTCACCCGCACAGGCGAGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGTCGCCGACGGAGGTaGAGGCGAGCACCCGCACGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARRRRR*RRAPAR
Trigger: CCGTGCGGGTGCTCGCCTTCACCTCCGTCGGCGACG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGGGCACCTCCAGCTaGCGCGAGTGCCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARGTSS*RECRRL
Trigger: CAGCCTGCGGCACTCGCGTCAGCTGGAGGTGCCCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCAGGCCCTGCAGCGTaGGCGCGTTCTCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASGPAA*ARSPRP
Trigger: CGGGCGCGGAGAACGCGCTCACGCTGCAGGGCCTGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACCAGGGCCCCGTTGTaGGTTTCCGGCGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATRAPL*VSGGGG
Trigger: CCCGCCGCCGCCGGAAACGCACAACGGGGCCCTGGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCTCAGGACCTCGGCTaGCTCCTCGCCCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAQDLG*LLAQAA
Trigger: GGCGGCCTGGGCGAGGAGGCAGCCGAGGTCCTGAGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGGCAGTCCAGGCGGTaGCCGTCTGCTGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARQSRR*PSAGGR
Trigger: GCGGCCTCCAGCAGACGGTCACCGCCTGGACTGCCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGTTCCGGGTCCTCTaGGCCCAGCGGTCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGFRVL*AQRSVA
Trigger: CGCTACCGACCGCTGGGCTCAGAGGACCCGGAACCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGATGGCCGTGGCGTTaGGCGCCTCCGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGWPWR*APPPPP
Trigger: AGGTGGAGGCGGAGGCGCTCAACGCCACGGCCATCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAGGCGGTGACCGTCTaGTGGAGGCCGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQAVTV*WRPPRL
Trigger: CAGCCTGGGCGGCCTCCAGCAGACGGTCACCGCCTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCCTCGGGGGTCTGCTaGACCGACAGGGTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPSGVC*TDRVGR
Trigger: CCGCCCAACCCTGTCGGTGCAGCAGACCCCCGAGGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCCGCCTCCAGAATCTaGGGGTGGCCACGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAASRI*GWPRGV
Trigger: CACGCCCCGTGGCCACCCGCAGATTCTGGAGGCGGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCCCGGCTCAGCCGCTaGCGGCAGCTCAGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAARLSR*RQLSLS
Trigger: CGAGAGACTGAGCTGCCGGCAGCGGCTGAGCCGGGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCCAGGGCCCCAGGTaGGCGCCATGCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACQGPR*APCLAA
Trigger: CGCTGCCAAGCATGGCGCCCACCTGGGGCCCTGGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGCGGATCAGGCCGTTaGGCTCCACCGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARGSGR*APPAPP
Trigger: GGGAGGAGCCGGTGGAGCCCAACGGCCTGATCCGCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGCCCGCAGGTTCATaGGCTGGCCCGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARPAGS*AGPALP
Trigger: AGGGAGTGCCGGGCCAGCCCATGAACCTGCGGGCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCGGTGACCGTCTGCTaGAGGCCGCCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAVTVC*RPPRLL
Trigger: CAGCAGCCTGGGCGGCCTCCAGCAGACGGTCACCGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTCGGCGGGCACGGGTaGCAGCCAGCGGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALGGHG*QPAEKD
Trigger: GTCCTTCTCCGCTGGCTGCCACCCGTGCCCGCCGAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGCCCCGGCGCGTGTaGGCTCGCACTTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGPRRV*ARTWRS
Trigger: TGACCTCCAAGTGCGAGCCCACACGCGCCGGGGCCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGTCCTTGGGGTGGTaGGGGGCGAGGTCGGCATTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGSLGW*GARSAL
Trigger: CAATGCCGACCTCGCCCCTCACCACCCCAAGGACCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCTGTCGTTGGCCTTaGGCCGCTCCGTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGCRWP*AAPCAP
Trigger: CGGAGCACACGGAGCGGCTCAAGGCCAACGACAGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGAGCATCCGGGCTTaGACGTTCCGCGGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALSIRA*TFRGAL
Trigger: CAGCGCGCCGCGGAACGTGCAAGCCCGGATGCTCAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGTCCTCCAGCAGGCTaGCCACGGTGGTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARPPAG*PRWSAG
Trigger: GCCTGCTGACCACCGTGGGCAGCCTGCTGGAGGACG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGACTGCAGCGTGCGCTaGCGCACCACGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGADCSVR*RTTGVK
Trigger: CTTCACCCCCGTGGTGCGGCAGCGCACGCTGCAGTC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGAGGCCGCCCAGGCTaGTGCCGCGATTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGGRPG*CRDWSA
Trigger: TGCTGACCAATCGCGGCAGCAGCCTGGGCGGCCTCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCACATCCTCGTCGGTaGGGACGACCACGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAHPRR*GRPRAS
Trigger: GCTCGCCCGTGGTCGTCCGCACCGACGAGGATGTGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGCCCTCGGGGGTCTaGTGCACCGACAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALPSGV*CTDRVG
Trigger: CCCAACCCTGTCGGTGCAGCAGACCCCCGAGGGCAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCGTGCCAGCAGGCTaGCCTCGGGGGTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASVPAG*PRGSAA
Trigger: TGCAGCAGACCCCCGAGGGCAGCCTGCTGGCACGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCCCGGCCGAGGCGTTaGCGGCCGCCTCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASRPRR*RPPPES
Trigger: AGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCTCATGGGCAGGATaGAGAAGCGCGGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGSWAG*RSAGPR
Trigger: GCGTGGCCCCGCGCTTCTCCATCCTGCCCATGAGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGCAGGTTCATGGGCTaGCCCGGCACTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARRFMG*PGTPCC
Trigger: GCAGCAGGGAGTGCCGGGCCAGCCCATGAACCTGCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCCACCTCCCGGCCATaGTCGCCTTCCCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPTSRP*SPSRKR
Trigger: CCTCTTCCGGGAAGGCGACCATGGCCGGGAGGTGGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGCACCGACAGGGTTaGGCGGCCCAGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALHRQG*AAQHCS
Trigger: GGAGCAGTGCTGGGCCGCCCAACCCTGTCGGTGCAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCGGGAACTCCAGGGTaGCCAGGGGCGTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAGTPG*PGASSP
Trigger: AGGACTCGACGCCCCTGGCCACCCTGGAGTTCCCGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTAGAGGTTGGCAGGTaGGGAGTAGCGCACGCCGGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVEVGR*GVAHAG
Trigger: GCCGGCGTGCGCTACTCCTCACCTGCCAACCTCTAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCACGGCCACGCAGGTaGTGTTCACGTTGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPRPRR*CSRCPL
Trigger: CAGGGGGCAACGTGAACATCACCTGCGTGGCCGTGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTCGCCTGTGCGGGTaGCCACGGACTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVARLCG*PRTRWG
Trigger: CCCCCAGCGAGTCCGTGGTCACCCGCACAGGCGAGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCTCCAGGACAGCGTaGTGCTGGTCTCCGACCTGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGSRTA*CWSPTW
Trigger: CCAGGTCGGAGACCAGCATCACGCTGTCCTGGAGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCGGGGCACCTCCAGCTaGCGCGAGTGCCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRGTSS*RECRRL
Trigger: CAGCCTGCGGCACTCGCGTCAGCTGGAGGTGCCCCG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCAGCCGCGTCATCATaGCGATGGTCGCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPAASS*RWSPTA
Trigger: AGCGGTCGGCGACCATCGTCATGATGACGCGGCTGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCCGGCCAGTACTGGTaGCACTTCTCCCGGCCCATC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAGQYW*HFSRPI
Trigger: GATGGGCCGGGAGAAGTGTCACCAGTACTGGCCGGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCCCTTGTGCACGCCTaGTGCCGTGTAGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPLVHA*CRVAVL
Trigger: GAGGACCGCTACACGGCATCAGGCGTGCACAAGGGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTCAGGCCCTGCAGCGTaGGCGCGTTCTCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVSGPAA*ARSPRP
Trigger: CGGGCGCGGAGAACGCGCTCACGCTGCAGGGCCTGA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCCAGGTGGGCGCCATaGTTGGCAGCGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPRWAP*LAATSD
Trigger: ATCGGAGGTCGCTGCCAAGCATGGCGCCCACCTGGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTGGGCGAGATGGACTaGAGCGTGCGCTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALGEMD*SVRCRT
Trigger: GGTGCGGCAGCGCACGCTGCAGTCCATCTCGCCCAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262963.10
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCCGCCCAGGCTGCTaGCGCGATTGGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGRPGC*RDWSAQ
Trigger: TTGTGCTGACCAATCGCGGCAGCAGCCTGGGCGGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCGAGTGCCGCAGGCTaGGCCTCTGTAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAASAAG*ASVAVR
Trigger: TCTCACGGCTACAGAGGCGCAGCCTGCGGCACTCGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCCCACACCGGCACTaGAGTGAACCACGATGGGGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGPHRH*SEPRWG
Trigger: GCCCCATCGTGGTTCACTGCAGTGCCGGTGTGGGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCCCACGCCGGCACTaGAGTGGACAGAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACPRRH*SGQRWG
Trigger: GCCCCATCTCTGTCCACTGCAGTGCCGGCGTGGGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCTGACGGTTTGGACTaGAGCGTGCGCTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAADGLD*SVRCRT
Trigger: GGTGCGGCAGCGCACGCTGCAGTCCAAACCGTCAGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCTCGGCGCCCTCCATaGGCACGTAGTGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPRRPP*ARSGPG
Trigger: ACCAGGTCCACTACGTGCGCATGGAGGGCGCCGAGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCGTGTCCTCCGGGATaGTCAGGACCTCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAACPPG*SGPRLP
Trigger: AGGCAGCCGAGGTCCTGAGCATCCCGGAGGACACGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCGGGCTTCAGGCCCTaGAGCGTGAGCGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASGFRP*SVSAFS
Trigger: GGAGAACGCGCTCACGCTGCAGGGCCTGAAGCCCGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCAGGCTGCCCACGGTaGTCAGCAGGCTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAGCPR*SAGCRP
Trigger: TGGACGACAGCCTGCTGACCACCGTGGGCAGCCTGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCTGGTCTCCGACCTaGCCTCGGCCCGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACWSPT*PRPAGS
Trigger: TGAACCTGCGGGCCGAGGCCAGGTCGGAGACCAGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGACAGTCCGGGACTaGCCATCCCGGGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARTVRD*PSRASV
Trigger: CACAGATGCCCGGGATGGCCAGTCCCGGACTGTCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCCCTCCCCCGACTTTaGCACACCCTGTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAALPRL*HTLFRP
Trigger: TGGCCGGAACAGGGTGTGCCAAAGTCGGGGGAGGGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACGCCGGCACTGCAGTaGACAGAGATGGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATPALQ*TEMGPS
Trigger: GGACGGCCCCATCTCTGTCCACTGCAGTGCCGGCGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGTGGGCGCCATGCTTaGCAGCGACCTCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGGRHA*QRPPIS
Trigger: GGAGATCGGAGGTCGCTGCCAAGCATGGCGCCCACC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGAGCTCTCGGGCCCTaGTCCCACCTCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARALGP*SHLCVS
Trigger: GCTCACACAGAGGTGGGACCAGGGCCCGAGAGCTCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCCAGAATCTGCGGGTaGCCACGGGGCGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASRICG*PRGVSS
Trigger: GGAGGACACGCCCCGTGGCCACCCGCAGATTCTGGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGTCACCCGTGGCCTaGCACACGAAAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGSPVA*HTKEAT
Trigger: TGTGGCCTCTTTCGTGTGTCAGGCCACGGGTGACCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGTTGCCCCCTGGCATaGTCTCGTGGCTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARCPLA*SRGSWA
Trigger: TGCCCATGAGCCACGAGATCATGCCAGGGGGCAACG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGAGCAACCGCCTCAATaGCGCCCAGGCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAEQPPQ*RPGWTW
Trigger: CCATGTCCAGCCTGGGCGTCATTGAGGCGGTTGCTC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCTGGCCGATGGAGTTaGCGGCCGACACCCAGATCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPGRWS*RPTPRS
Trigger: AGATCTGGGTGTCGGCCGTCAACTCCATCGGCCAGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCATGGTGGTCGCGCTaGGCATCCGGGCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASWWSR*ASGLAR
Trigger: ACGTGCAAGCCCGGATGCTCAGCGCGACCACCATGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCAGGCAGTCCAGGCGGTaGCCGTCTGCTGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRQSRR*PSAGGR
Trigger: GCGGCCTCCAGCAGACGGTCACCGCCTGGACTGCCT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCAGGGCCTCGTGGATaGAGCTGTACTGGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAGPRG*SCTGPP
Trigger: CGGAGGACCAGTACAGCTTCATCCACGAGGCCCTGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGGTTCCGGGTCCTCTaGGCCCAGCGGTCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVGFRVL*AQRSVA
Trigger: CGCTACCGACCGCTGGGCTCAGAGGACCCGGAACCC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGTCCCACCTCTGTGTaGGCGACAGTCGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGPTSV*ATVVMR
Trigger: CCGCATCACGACTGTCGCTCACACAGAGGTGGGACC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGCCACCGTGTATTTaGCGATGGCCCCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARPPCI*RWPRCA
Trigger: AGCGCAACGGGGCCATCGTCAAATACACGGTGGCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGGCCCGGCACTCCCTaGTGCGTCTTGACCTGGATG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAWPGTP*CVLTWM
Trigger: CATCCAGGTCAAGACGCAGCAGGGAGTGCCGGGCCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCAGGCAGCGGCCCCTaGGTGGCAATGTACGCGTTC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASGSGP*VAMYAF
Trigger: GAACGCGTACATTGCCACGCAGGGGCCGCTGCCTGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATGGTCGCCGACCGCTaGTCCCACACCATACGCCAG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAMVADR*SHTIRQ
Trigger: CTGGCGTATGGTGTGGGAGCAGCGGTCGGCGACCAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGGCACTTCTGTGTTaGCACAGCCCACGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARALLC*HSPRPP
Trigger: TGGAGGCCGTGGGCTGTGGCAACACAGAAGTGCCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTGCCACCTCCTGCCCTaGCCACTGGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPCHLLP*PLGVQA
Trigger: GGCCTGGACCCCCAGTGGGCAGGGCAGGAGGTGGCA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGCCGCTGCCACCTCCTaGCCTGCCCACTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGAAATS*PAHWGS
Trigger: GGACCCCCAGTGGGCAGGGCAGGAGGTGGCAGCGGC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTACCAGGGCCCCGTTGTaGGTTTCCGGCGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGTRAPL*VSGGGG
Trigger: CCCGCCGCCGCCGGAAACGCACAACGGGGCCCTGGT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCCTCGGGGGTCTGCTaGACCGACAGGGTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVPSGVC*TDRVGR
Trigger: CCGCCCAACCCTGTCGGTGCAGCAGACCCCCGAGGG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCCGCCTCCAGAATCTaGGGGTGGCCACGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVAASRI*GWPRGV
Trigger: CACGCCCCGTGGCCACCCGCAGATTCTGGAGGCGGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGGTCACTCGTGGCTTaGGGTCACCCGTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARSLVA*GHPWPD
Trigger: GTCAGGCCACGGGTGACCCCAAGCCACGAGTGACCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTTCCAGGTCACTCGTaGCTTGGGGTCACCCGTGGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVPGHS*LGVTRG
Trigger: GCCACGGGTGACCCCAAGCCACGAGTGACCTGGAAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGTGTCCTCAGCGGCTaGATCCTCAGCACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGVLSG*ILSTAP
Trigger: AGGGGCAGTGCTGAGGATCCAGCCGCTGAGGACACC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCTCGTACTCCGAGTTaGGGCTCAGGCCGCCGATGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASRTPS*GSGRRC
Trigger: GCATCGGCGGCCTGAGCCCCAACTCGGAGTACGAGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCGCGGATCAGGCCGTTaGGCTCCACCGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRGSGR*APPAPP
Trigger: GGGAGGAGCCGGTGGAGCCCAACGGCCTGATCCGCG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCTGCGTCTTGACCTaGATGGGGTCCGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACCVLT*MGSERG
Trigger: GCCCCTCTCGGACCCCATCCAGGTCAAGACGCAGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGCCGGGATGGAACGTaGGTGGCAGCACAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARRDGT*VAAQRS
Trigger: GCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCATCCACGATGGGCTaGGGGTCCGGGTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPSTMG*GSGLSS
Trigger: GCTGGATAACCCGGACCCCCAGCCCATCGTGGATGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCTCGCCATCCACGATaGGCTGGGGGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPRHPR*AGGPGY
Trigger: ATAACCCGGACCCCCAGCCCATCGTGGATGGCGAGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCAGTGAACCACGATaGGGCCGGCATCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACSEPR*GRHLAG
Trigger: ACCCGCCAGATGCCGGCCCCATCGTGGTTCACTGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCTCCACACCCCGGATaGGTTGCAGACAGACCCGTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPPHPG*VADRPV
Trigger: CACGGGTCTGTCTGCAACCCATCCGGGGTGTGGAGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCCGGAACACATACGTaGCCCCCTTGTGCACGCCTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAGTHT*PPCARL
Trigger: CAGGCGTGCACAAGGGGGCCACGTATGTGTTCCGGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCTCGGCGGGCACGGGTaGCAGCCAGCGGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPLGGHG*QPAEKD
Trigger: GTCCTTCTCCGCTGGCTGCCACCCGTGCCCGCCGAG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGGCCCCGGCGCGTGTaGGCTCGCACTTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVGPRRV*ARTWRS
Trigger: TGACCTCCAAGTGCGAGCCCACACGCGCCGGGGCCC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCGGGTTGCAGGTCTTaGCTCTCCGCAGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAGCRS*LSAGKP
Trigger: TGGCTTTCCTGCGGAGAGTCAAGACCTGCAACCCGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCGCTGGGACCTCATaGGCGTCACGTGGCCATAGA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACAGTS*ASRGHR
Trigger: TCTATGGCCACGTGACGCTCATGAGGTCCCAGCGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGAGTTCCATGCCAGTaGCGTGTTCGCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARVPCQ*RVRQAP
Trigger: TGGAGCCTGGCGAACACGTCACTGGCATGGAACTCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGATGGCCGTGGCGTTaGGCGCCTCCGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGWPWR*APPPPP
Trigger: AGGTGGAGGCGGAGGCGCTCAACGCCACGGCCATCC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGTAGGCGGCTACCGTaGTGGAGTACGCGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACRRLP*WSTRSQ
Trigger: CTGAGACCGCGTACTCCATCACGGTAGCCGCCTACA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGGGTTGCCGCTGGCTaGACAGAGCATGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARVAAG*TEHGGC
Trigger: ACAGCCACCATGCTCTGTGCAGCCAGCGGCAACCCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCTCAGGGTCAGGGTTaGCGCTGGCTGCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASQGQG*RWLHRA
Trigger: TGCTCTGTGCAGCCAGCGGCAACCCTGACCCTGAGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCTGAGCATCCGGGCTTaGACGTTCCGCGGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPLSIRA*TFRGAL
Trigger: CAGCGCGCCGCGGAACGTGCAAGCCCGGATGCTCAG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACCGGCTCCTCCCACTaGACAATCATGGTGGTCGCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATGSSH*TIMVVA
Trigger: CGCGACCACCATGATTGTGCAGTGGGAGGAGCCGGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGTGCTTCTGCCAGTTaGCCACGGGGTGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACASAS*PRGAPV
Trigger: AACCGGAGCACCCCGTGGGCAACTGGCAGAAGCACA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCCACGTTGTGCTTCTaGCAGTTGCCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASTLCF*QLPTGC
Trigger: GCACCCCGTGGGCAACTGGCAGAAGCACAACGTGGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCGTCCTCCAGCAGGCTaGCCACGGTGGTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRPPAG*PRWSAG
Trigger: GCCTGCTGACCACCGTGGGCAGCCTGCTGGAGGACG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGGAGGCCGCCCAGGCTaGTGCCGCGATTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPGGRPG*CRDWSA
Trigger: TGCTGACCAATCGCGGCAGCAGCCTGGGCGGCCTCC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCAGGCGGTGACCGTCTaGTGGAGGCCGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGQAVTV*WRPPRL
Trigger: CAGCCTGGGCGGCCTCCAGCAGACGGTCACCGCCTG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCGAAGCCGCCATACTaGTTCTGGTCGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASKPPY*FWSPGW
Trigger: CCATCCCGGCGACCAGAAGCAGTATGGCGGCTTCGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTGCTCCGCCATGTCTaGGATGGGAATTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVLRHV*DGNWRV
Trigger: CACCCGCCAATTCCCATCGCAGACATGGCGGAGCAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTGAGCCGCTCCGTGTaGTCCGCCATGTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALSRSV*SAMSAM
Trigger: CATCGCAGACATGGCGGAGCACACGGAGCGGCTCAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCATAGAGGCTGCGTaGGGGCACTTCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGIEAA*GHFCVA
Trigger: GGCAACACAGAAGTGCCCGCACGCAGCCTCTATGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACACCCCGGATGGGTTaGAGACAGACCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATPRMG*RQTRVL
Trigger: GAGCACACGGGTCTGTCTGCAACCCATCCGGGGTGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCACCTTGGGTTTGCTaGGAGCGCCATCGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPPWVC*ERHRPS
Trigger: TGAAGGGCGATGGCGCTCGCAGCAAACCCAAGGTGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAACCACCTTGGGTTTaGTGCGAGCGCCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQPPWV*CERHRP
Trigger: AGGGCGATGGCGCTCGCAGCAAACCCAAGGTGGTTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCAGCGTGCCAGCAGGCTaGCCTCGGGGGTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPSVPAG*PRGSAA
Trigger: TGCAGCAGACCCCCGAGGGCAGCCTGCTGGCACGCT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTGCCAGGGCCCCAGGTaGGCGCCATGCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGCQGPR*APCLAA
Trigger: CGCTGCCAAGCATGGCGCCCACCTGGGGCCCTGGCA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCTTGGGGTCACCCGTaGCCTGACACACGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAWGHP*PDTRKR
Trigger: CCTCTTTCGTGTGTCAGGCCACGGGTGACCCCAAGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGCACAGAGCATGGTaGCTGTCCGTGTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALHRAW*LSVSAP
Trigger: TGGAGCGGACACGGACAGCCACCATGCTCTGTGCAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGGCTGCACAGAGCATaGTGGCTGTCCGTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAWLHRA*WLSVSA
Trigger: AGCGGACACGGACAGCCACCATGCTCTGTGCAGCCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGCCCGCAGGTTCATaGGCTGGCCCGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRPAGS*AGPALP
Trigger: AGGGAGTGCCGGGCCAGCCCATGAACCTGCGGGCCG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGTTCTTGGGCGAGATaGACTGCAGCGTGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASSWAR*TAACAA
Trigger: GGCAGCGCACGCTGCAGTCCATCTCGCCCAAGAACT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262963.10
ENST00000592099.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGCGGTGACCGTCTGCTaGAGGCCGCCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGAVTVC*RPPRLL
Trigger: CAGCAGCCTGGGCGGCCTCCAGCAGACGGTCACCGC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACAGGCACGGGGCTCTaGCCGTCAGGAAGATACACC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATGTGL*PSGRYT
Trigger: GGTGTATCTTCCTGACGGCCAGAGCCCCGTGCCTGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCGGGGTCAGGAATTaGCCTCCACGAGACTTGCGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASGVRN*PPRDLR
Trigger: GCGCAAGTCTCGTGGAGGCCAATTCCTGACCCCGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAGATCCATGTCCTCTaGGCTACCCAGCGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQIHVL*ATQRGQ
Trigger: CTGACCCCGCTGGGTAGCCCAGAGGACATGGATCTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGATGGAACGTGGGTaGCAGCACAGAGAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGMERG*QHREAS
Trigger: GCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTCTGGTCGCCGGGATaGAACGTGGGTGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAFWSPG*NVGGST
Trigger: TGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCGCCATACTGCTTCTaGTCGCCGGGATGGAACGTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPPYCF*SPGWNV
Trigger: CACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTATTCGGGCACGCCATaGTCCGGCCACGCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAYSGTP*SGHAVN
Trigger: GTTTACGGCGTGGCCGGACCATGGCGTGCCCGAATA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCCAGGAAGGGCGTTaGGTATTCGGGCACGCCATG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASQEGR*VFGHAM
Trigger: CATGGCGTGCCCGAATACCCAACGCCCTTCCTGGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACCATGGCCGGCCGCTaGGTTCGTAGCATCTTCACC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATMAGR*VRSIFT
Trigger: GGTGAAGATGCTACGAACCCAGCGGCCGGCCATGGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCCGTTCACCTCCTTaGGTTCCGGGTCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACRSPP*VPGPLS
Trigger: GCTCAGAGGACCCGGAACCCAAGGAGGTGAACGGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTCTTGGGCGAGACTTaGTCCCGCAGGAACGTCCGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAFLGET*SRRNVR
Trigger: CCGGACGTTCCTGCGGGACCAAGTCTCGCCCAAGAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCACGGCCACGCAGGTaGTGTTCACGTTGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVPRPRR*CSRCPL
Trigger: CAGGGGGCAACGTGAACATCACCTGCGTGGCCGTGG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGGCTCCAGGACAGCGTaGTGCTGGTCTCCGACCTGG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPGSRTA*CWSPTW
Trigger: CCAGGTCGGAGACCAGCATCACGCTGTCCTGGAGCC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTAGGCTCGCTCTTCTaGAGCACGGCAAGCACGAAG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVGSLF*STASTK
Trigger: CTTCGTGCTTGCCGTGCTTCAGAAGAGCGAGCCTAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAGCTGGAAGGGGTCTaGGAAGGGACTGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQLEGV*EGTGCK
Trigger: TTTGCAGCCAGTCCCTTCTCAGACCCCTTCCAGCTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGGTCCTTGGGGTGGTaGGGGGCGAGGTCGGCATTG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGSLGW*GARSAL
Trigger: CAATGCCGACCTCGCCCCTCACCACCCCAAGGACCC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGCTGTCGTTGGCCTTaGGCCGCTCCGTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGCRWP*AAPCAP
Trigger: CGGAGCACACGGAGCGGCTCAAGGCCAACGACAGCC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAATGGGCTGGAGGATaGCACGGGAGTGGTCATAGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQWAGG*HGSGHR
Trigger: CCTATGACCACTCCCGTGTCATCCTCCAGCCCATTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAATGTGCCAAGTATTTaGAGGCGGCGGCCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGANVPSI*RRRPVP
Trigger: TGGCACCGGCCGCCGCCTTCAAATACTTGGCACATT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGGCTCCTGAGGCCTaGATCTGGAGTCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGAPEA*IWSLEV
Trigger: AACTTCCAGACTCCAGATTCAGGCCTCAGGAGCCCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGTGAGCGACAGTCGTaGTGCGGTACTGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACERQS*CGTGST
Trigger: AGTGGACCCAGTACCGCATCACGACTGTCGCTCACA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGTCGTCCACGTTGTaGTTCTGCCAGTTGCCCACG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALSSTL*FCQLPT
Trigger: CGTGGGCAACTGGCAGAAGCACAACGTGGACGACAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGGCCGCCCAGGCTGCTaGCGCGATTGGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPGRPGC*RDWSAQ
Trigger: TTGTGCTGACCAATCGCGGCAGCAGCCTGGGCGGCC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCCTCCACGAGACTTaGGCAGTGGCACCATCACAA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGLHET*AVAPSQ
Trigger: TTGTGATGGTGCCACTGCGCAAGTCTCGTGGAGGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGCGAGTGCCGCAGGCTaGGCCTCTGTAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPASAAG*ASVAVR
Trigger: TCTCACGGCTACAGAGGCGCAGCCTGCGGCACTCGC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCACAGAGAAGCGAGCTaGAATATAGGGCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAHREAS*NIGPGH
Trigger: GTGCCCCGGCCCTATATTGCAGCTCGCTTCTCTGTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTGCCCACGCCGGCACTaGAGTGGACAGAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVCPRRH*SGQRWG
Trigger: GCCCCATCTCTGTCCACTGCAGTGCCGGCGTGGGCA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGGGGCTCGAGGGGCTaGGTCGTCCTCGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVGGSRG*VVLGNG
Trigger: ACCATTTCCGAGGACGACGCAGCCCCTCGAGCCCCC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGCACATCCTCGTCGGTaGGGACGACCACGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGAHPRR*GRPRAS
Trigger: GCTCGCCCGTGGTCGTCCGCACCGACGAGGATGTGC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTGCCCTCGGGGGTCTaGTGCACCGACAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGLPSGV*CTDRVG
Trigger: CCCAACCCTGTCGGTGCAGCAGACCCCCGAGGGCAG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGCGTGTCCTCCGGGATaGTCAGGACCTCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPACPPG*SGPRLP
Trigger: AGGCAGCCGAGGTCCTGAGCATCCCGGAGGACACGC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTCCCGGCCGAGGCGTTaGCGGCCGCCTCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSRPRR*RPPPES
Trigger: AGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTCGGGCTTCAGGCCCTaGAGCGTGAGCGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPSGFRP*SVSAFS
Trigger: GGAGAACGCGCTCACGCTGCAGGGCCTGAAGCCCGA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCACAAGGAGGCCCATaGGACCAACCACAGACACCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPQGGP*DQPQTP
Trigger: TGGTGTCTGTGGTTGGTCCCATGGGCCTCCTTGTGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCCCCAACCGAGTTCTaGGCCACACACTCGTACACG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASPTEF*ATHSYT
Trigger: CGTGTACGAGTGTGTGGCCCAGAACTCGGTTGGGGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAAGCCAGAGGGCAGCTaGTCCTCTCGGAGGACAGTA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAKPEGS*SSRRTV
Trigger: TACTGTCCTCCGAGAGGACCAGCTGCCCTCTGGCTT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTCGCACGTAGAGGTTaGCAGGTGAGGAGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALARRG*QVRSSA
Trigger: TGCGCTACTCCTCACCTGCCAACCTCTACGTGCGAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCTGGCATGATCTCGTaGCTCATGGGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPGMIS*LMGRME
Trigger: CTCCATCCTGCCCATGAGCCACGAGATCATGCCAGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGTGCTCCGGTTCCATaGTGTAGTAGACGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGAPVP*CSRRGS
Trigger: GCTACCGCGTCTACTACACCATGGAACCGGAGCACC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCAGGCTGCCCACGGTaGTCAGCAGGCTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVAGCPR*SAGCRP
Trigger: TGGACGACAGCCTGCTGACCACCGTGGGCAGCCTGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCAGGTTCATGGGCTaGCCCGGCACTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRRFMG*PGTPCC
Trigger: GCAGCAGGGAGTGCCGGGCCAGCCCATGAACCTGCG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGGCGTACTCCGTGTTaGGCTTCAGGTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARRTPC*ASGPPP
Trigger: TGGTGGAGGACCTGAAGCCCAACACGGAGTACGCCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTCTGCGATGGGAATTaGCGGGTGGCTAAGCATGCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVCDGN*RVAKHA
Trigger: GGCATGCTTAGCCACCCGCCAATTCCCATCGCAGAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCCAGCAGGGCCTCGTaGATGAAGCTGTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASSRAS*MKLYWS
Trigger: GGACCAGTACAGCTTCATCCACGAGGCCCTGCTGGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCATCTCCCGCAGCTTaGTCAGCATCACCACGATCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPSPAA*SASPRS
Trigger: CGATCGTGGTGATGCTGACCAAGCTGCGGGAGATGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCGGACAGTCCGGGACTaGCCATCCCGGGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRTVRD*PSRASV
Trigger: CACAGATGCCCGGGATGGCCAGTCCCGGACTGTCCG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCAGTGGACAGAGATaGGGCCGTCCTGGCCAAACT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACSGQR*GRPGQT
Trigger: AGTTTGGCCAGGACGGCCCCATCTCTGTCCACTGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCACGCCGGCACTGCAGTaGACAGAGATGGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPTPALQ*TEMGPS
Trigger: GGACGGCCCCATCTCTGTCCACTGCAGTGCCGGCGT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTCGTGATGCGGTACTaGGTCCACTTCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVVMRY*VHFSKA
Trigger: GGCCTTGGAGAAGTGGACCCAGTACCGCATCACGAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCGAGCTCTCGGGCCCTaGTCCCACCTCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVRALGP*SHLCVS
Trigger: GCTCACACAGAGGTGGGACCAGGGCCCGAGAGCTCG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTGATGACCATCTCCTaGGCATCGGCCAGCATGACG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVMTIS*ASASMT
Trigger: CGTCATGCTGGCCGATGCCCAGGAGATGGTCATCAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588012.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTCCAGAATCTGCGGGTaGCCACGGGGCGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVSRICG*PRGVSS
Trigger: GGAGGACACGCCCCGTGGCCACCCGCAGATTCTGGA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCTTGGCATGGACTGTaGTCTCCCCAACCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAWHGL*SPQPSS
Trigger: AGAACTCGGTTGGGGAGATCACAGTCCATGCCAAGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGATCGCAGCTGTTTaGTGCGTCCATTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALIAAV*CVHCWH
Trigger: GTGCCAGCAATGGACGCATCAAACAGCTGCGATCAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGAGCAACCGCCTCAATaGCGCCCAGGCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPEQPPQ*RPGWTW
Trigger: CCATGTCCAGCCTGGGCGTCATTGAGGCGGTTGCTC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCAGCCGCGTCATCATaGCGATGGTCGCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPAASS*RWSPTA
Trigger: AGCGGTCGGCGACCATCGTCATGATGACGCGGCTGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATCACACTTGATCCGTaGCTTCTCCTCCAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAITLDP*LLLQPR
Trigger: ACGCGGCTGGAGGAGAAGTCACGGATCAAGTGTGAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGTCTTCTCTGGCTTaGTCCGCTCAAGCATGGCGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALSSLA*SAQAWR
Trigger: ACGCCATGCTTGAGCGGATCAAGCCAGAGAAGACAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCAGGGCCTCGTGGATaGAGCTGTACTGGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVAGPRG*SCTGPP
Trigger: CGGAGGACCAGTACAGCTTCATCCACGAGGCCCTGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCATGCTTTCAAAGTaGAACCCCGGCTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASMLSK*NPGSLR
Trigger: CCTCAGGGAGCCGGGGTTTCACTTTGAAAGCATGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGGTCCCACCTCTGTGTaGGCGACAGTCGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPGPTSV*ATVVMR
Trigger: CCGCATCACGACTGTCGCTCACACAGAGGTGGGACC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCCTTGTGCACGCCTaGTGCCGTGTAGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPLVHA*CRVAVL
Trigger: GAGGACCGCTACACGGCATCAGGCGTGCACAAGGGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCAGGTGGGCGCCATaGTTGGCAGCGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPRWAP*LAATSD
Trigger: ATCGGAGGTCGCTGCCAAGCATGGCGCCCACCTGGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTGGCCCGGCACTCCCTaGTGCGTCTTGACCTGGATG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVWPGTP*CVLTWM
Trigger: CATCCAGGTCAAGACGCAGCAGGGAGTGCCGGGCCA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTGTGGGGCTTGAGGTaGGTGATGAGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVWGLR*VMSFLV
Trigger: CACCAAGAAGCTCATCACGCACCTCAAGCCCCACAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCATGGTCGCCGACCGCTaGTCCCACACCATACGCCAG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVMVADR*SHTIRQ
Trigger: CTGGCGTATGGTGTGGGAGCAGCGGTCGGCGACCAT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCCGTAGGTCTCCGTaGCTCTGTTGGGCCAATACT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASRRSP*LCWANT
Trigger: AGTATTGGCCCAACAGAGGCACGGAGACCTACGGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGCCCACACCGGCACTaGAGTGAACCACGATGGGGC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGPHRH*SEPRWG
Trigger: GCCCCATCGTGGTTCACTGCAGTGCCGGTGTGGGCC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGTAGGCATAGAGGCTaGGTGCGGGCACTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACRHRG*VRALLC
Trigger: ACACAGAAGTGCCCGCACGCAGCCTCTATGCCTACA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCCGAGGTACTCCAGTaGCGCCTGGTAACAGAACTG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASEVLQ*RLVTEL
Trigger: CAGTTCTGTTACCAGGCGGCACTGGAGTACCTCGGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCAGAAACACAGCTGCTaGCGCTGCCACCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVQKHSC*RCHLLP
Trigger: GGGCAGGAGGTGGCAGCGGCAGCAGCTGTGTTTCTG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGCTGACGGTTTGGACTaGAGCGTGCGCTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGADGLD*SVRCRT
Trigger: GGTGCGGCAGCGCACGCTGCAGTCCAAACCGTCAGC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGGTGTCCTCAGCGGCTaGATCCTCAGCACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPGVLSG*ILSTAP
Trigger: AGGGGCAGTGCTGAGGATCCAGCCGCTGAGGACACC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTTCACGTTGCCCCCTaGCATGATCTCGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVHVAP*HDLVAH
Trigger: ATGAGCCACGAGATCATGCCAGGGGGCAACGTGAAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGTTCTCAGTCACCATaGGAGTCCCGGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACSQSP*ESRELW
Trigger: CCAAAGCTCCCGGGACTCCCATGGTGACTGAGAACA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATAGGACACAGGATCTaGGTTGCCCGAGTCCCACGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAIGHRI*VARVPR
Trigger: ACGTGGGACTCGGGCAACCCAGATCCTGTGTCCTAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTCTCGTACTCCGAGTTaGGGCTCAGGCCGCCGATGC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVSRTPS*GSGRRC
Trigger: GCATCGGCGGCCTGAGCCCCAACTCGGAGTACGAGA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTGCTGCGTCTTGACCTaGATGGGGTCCGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPCCVLT*MGSERG
Trigger: GCCCCTCTCGGACCCCATCCAGGTCAAGACGCAGCA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCCGGGTTATCCAGCTaGAAGGGGTCTGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASGLSS*KGSEKG
Trigger: TCCCTTCTCAGACCCCTTCCAGCTGGATAACCCGGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATGGGAATTGGCGGGTaGCTAAGCATGCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAMGIGG*LSMPGV
Trigger: GACTCCAGGCATGCTTAGCCACCCGCCAATTCCCAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATGCCTTCAATGGGCTaGAGGATGACACGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAMPSMG*RMTREW
Trigger: CCACTCCCGTGTCATCCTCCAGCCCATTGAAGGCAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCCGTAAACTGGAACTaGCGGACCTCGCGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAVNWN*RTSRFS
Trigger: TGAGAAACGCGAGGTCCGCCAGTTCCAGTTTACGGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTGCAGTGAACCACGATaGGGCCGGCATCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVCSEPR*GRHLAG
Trigger: ACCCGCCAGATGCCGGCCCCATCGTGGTTCACTGCA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATGAAGCGTGACGTGTaGGCCTTGGAGTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAMKRDV*ALELAS
Trigger: GCTGGCTAACTCCAAGGCCCACACGTCACGCTTCAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGGTCACAACCACCTTaGGTTTGCTGCGAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAWSQPP*VCCERH
Trigger: ATGGCGCTCGCAGCAAACCCAAGGTGGTTGTGACCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCAGCACTGCTCCCTTaGTCACAACCACCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPALLP*SQPPWV
Trigger: AACCCAAGGTGGTTGTGACCAAGGGAGCAGTGCTGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATCGTCTCAAAGCGCTaGGAGTTGACCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAIVSKR*ELTFLP
Trigger: GGGCAAGAAGGTCAACTCTCAGCGCTTTGAGACGAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGTTGCCCCCTGGCATaGTCTCGTGGCTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRCPLA*SRGSWA
Trigger: TGCCCATGAGCCACGAGATCATGCCAGGGGGCAACG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGATTTCACCGTGATCTaGGCAACCGCCTCAATGACG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGADFTVI*ATASMT
Trigger: CGTCATTGAGGCGGTTGCTCAGATCACGGTGAAATC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGAGAGATTTCACCGTaGTCTGAGCAACCGCCTCAA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGEISP*SEQPPQ
Trigger: TTGAGGCGGTTGCTCAGATCACGGTGAAATCTCTCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTCATGGTGGTCGCGCTaGGCATCCGGGCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSWWSR*ASGLAR
Trigger: ACGTGCAAGCCCGGATGCTCAGCGCGACCACCATGA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAGGGAACTCCCAGCTaGGCAGAACTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQGTPS*AELMSS
Trigger: TGAAGACATCAGTTCTGCTCAGCTGGGAGTTCCCTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCGAGTTCCATGCCAGTaGCGTGTTCGCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRVPCQ*RVRQAP
Trigger: TGGAGCCTGGCGAACACGTCACTGGCATGGAACTCG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCTCTCATAGGGCATaGTGTTCACCAGGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACSHRA*CSPGGS
Trigger: AGAACCGCCTGGTGAACATCATGCCCTATGAGAGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCATCTTCACCGTCTaGAAGATGTCCACCACGCCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASIFTV*KMSTTP
Trigger: AGGCGTGGTGGACATCTTTCAGACGGTGAAGATGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTTGGTGCGGGGTTCTaGGTCCTTGCGTTTACTGTC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAFGAGF*VLAFTV
Trigger: GACAGTAAACGCAAGGACTCAGAACCCCGCACCAAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGGATCCTCAGCACTaGCCCTGCACTCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALDPQH*PCTLIK
Trigger: TTTGATGAGAGTGCAGGGGCAGTGCTGAGGATCCAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTCTCAGGGTCAGGGTTaGCGCTGGCTGCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPSQGQG*RWLHRA
Trigger: TGCTCTGTGCAGCCAGCGGCAACCCTGACCCTGAGA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCACTGCTTTCAATCTaGAGGGCTCCTGATCGCAGC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASLLSI*RAPDRS
Trigger: GCTGCGATCAGGAGCCCTGCAGATTGAAAGCAGTGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGTCGGTTTCCTCACTaGTTTCAATCTGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGRFPH*FQSAGL
Trigger: GAGCCCTGCAGATTGAAAGCAGTGAGGAAACCGACC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCACCGGCTCCTCCCACTaGACAATCATGGTGGTCGCG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVTGSSH*TIMVVA
Trigger: CGCGACCACCATGATTGTGCAGTGGGAGGAGCCGGT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGGCACTTCTGTGTTaGCACAGCCCACGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRALLC*HSPRPP
Trigger: TGGAGGCCGTGGGCTGTGGCAACACAGAAGTGCCCG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGCATAGAGGCTGCGTaGGGGCACTTCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVGIEAA*GHFCVA
Trigger: GGCAACACAGAAGTGCCCGCACGCAGCCTCTATGCC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCACACCCCGGATGGGTTaGAGACAGACCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVTPRMG*RQTRVL
Trigger: GAGCACACGGGTCTGTCTGCAACCCATCCGGGGTGT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCAACCACCTTGGGTTTaGTGCGAGCGCCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVQPPWV*CERHRP
Trigger: AGGGCGATGGCGCTCGCAGCAAACCCAAGGTGGTTG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCCGACACGCCGATCTaGTCCTTGGGTTCTTTGATA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPDTPI*SLGSLI
Trigger: TATCAAAGAACCCAAGGACCAGATCGGCGTGTCGGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCTGCACAGAGCATGGTaGCTGTCCGTGTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVLHRAW*LSVSAP
Trigger: TGGAGCGGACACGGACAGCCACCATGCTCTGTGCAG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTGGCTGCACAGAGCATaGTGGCTGTCCGTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPWLHRA*WLSVSA
Trigger: AGCGGACACGGACAGCCACCATGCTCTGTGCAGCCA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCTGCTGCCGCGATTaGTCAGCACAAAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGCCRD*SAQSCR
Trigger: TCTACAACTTTGTGCTGACCAATCGCGGCAGCAGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCACAGGCACGGGGCTCTaGCCGTCAGGAAGATACACC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPTGTGL*PSGRYT
Trigger: GGTGTATCTTCCTGACGGCCAGAGCCCCGTGCCTGT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCAGCGGGGTCAGGAATTaGCCTCCACGAGACTTGCGC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPSGVRN*PPRDLR
Trigger: GCGCAAGTCTCGTGGAGGCCAATTCCTGACCCCGCT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCAGATCCATGTCCTCTaGGCTACCCAGCGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPQIHVL*ATQRGQ
Trigger: CTGACCCCGCTGGGTAGCCCAGAGGACATGGATCTG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCCGTGAGATGTCCTaGATGAGCTCTTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASREMS*MSSSRS
Trigger: GGATCTGGAAGAGCTCATCCAGGACATCTCACGGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGGATGGAACGTGGGTaGCAGCACAGAGAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVGMERG*QHREAS
Trigger: GCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCCGGGATGGAACGTaGGTGGCAGCACAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRRDGT*VAAQRS
Trigger: GCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCTCGCCATCCACGATaGGCTGGGGGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPRHPR*AGGPGY
Trigger: ATAACCCGGACCCCCAGCCCATCGTGGATGGCGAGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGTTCAGGAGGCATTTaGTGCGGGGTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACSGGI*CGVLSP
Trigger: AGGACTCAGAACCCCGCACCAAATGCCTCCTGAACA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATGGACTCATACTCCTaGGAGAGCTTGAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAMDSYS*ESLRLS
Trigger: CGACAGCCTCAAGCTCTCCCAGGAGTATGAGTCCAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCTCGCGTTTCTCACTaGAGCCATTCTTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPRVSH*SHSCAE
Trigger: CTCTGCACAAGAATGGCTCCAGTGAGAAACGCGAGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTATTCGGGCACGCCATaGTCCGGCCACGCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVYSGTP*SGHAVN
Trigger: GTTTACGGCGTGGCCGGACCATGGCGTGCCCGAATA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCACCATGGCCGGCCGCTaGGTTCGTAGCATCTTCACC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVTMAGR*VRSIFT
Trigger: GGTGAAGATGCTACGAACCCAGCGGCCGGCCATGGT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGCCGGAACACATACGTaGCCCCCTTGTGCACGCCTG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGAGTHT*PPCARL
Trigger: CAGGCGTGCACAAGGGGGCCACGTATGTGTTCCGGC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTTCTTGGGCGAGACTTaGTCCCGCAGGAACGTCCGG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVFLGET*SRRNVR
Trigger: CCGGACGTTCCTGCGGGACCAAGTCTCGCCCAAGAA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTGCCCCACCCTCCTCTaGTTCTGGGGAGCACTCCTA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVCPTLL*FWGALL
Trigger: TAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGAGGGGTCCGTCTATaGTCTGTGCCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRGVRL*SVPHPP
Trigger: AGGAGGGTGGGGCACAGACCATAGACGGACCCCTCG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAAAGCGCTGAGAGTTaGCCTTCTTGCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQSAES*PSCPSC
Trigger: ACAAGAAGGGCAAGAAGGTCAACTCTCAGCGCTTTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTTGTAGGGTGTGGGTaGGTTGTAGTTGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALVGCG*VVVVRE
Trigger: TTCCCTGACAACTACAACTCACCCACACCCTACAAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTGGCACCATCACAATaGAATAGCTCTGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVAPSQ*NSSGQA
Trigger: TGCCTGTCCAGAGCTATTTCATTGTGATGGTGCCAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTGAGATGTCCTGGATaGGCTCTTCCAGATCCATGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVRCPG*ALPDPC
Trigger: ACATGGATCTGGAAGAGCTCATCCAGGACATCTCAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTTGGTGCGGGGTTCTaGGTCCTTGCGTTTACTATG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAFGAGF*VLAFTM
Trigger: CATAGTAAACGCAAGGACTCAGAACCCCGCACCAAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262963.10
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGTAATCACTGCCCATaGTGCCTTCAATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACNHCP*CLQWAG
Trigger: TCCAGCCCATTGAAGGCATCATGGGCAGTGATTACA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGTTGGGCCAATACTaGTCACACTTGATCCGTGAC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALLGQY*SHLIRD
Trigger: GTCACGGATCAAGTGTGATCAGTATTGGCCCAACAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTGCGCTGGGACCTCATaGGCGTCACGTGGCCATAGA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGCAGTS*ASRGHR
Trigger: TCTATGGCCACGTGACGCTCATGAGGTCCCAGCGCA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCAATGTGCCAAGTATTTaGAGGCGGCGGCCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVNVPSI*RRRPVP
Trigger: TGGCACCGGCCGCCGCCTTCAAATACTTGGCACATT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTGTGAGCGACAGTCGTaGTGCGGTACTGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVCERQS*CGTGST
Trigger: AGTGGACCCAGTACCGCATCACGACTGTCGCTCACA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTAGGGTTGCCGCTGGCTaGACAGAGCATGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRVAAG*TEHGGC
Trigger: ACAGCCACCATGCTCTGTGCAGCCAGCGGCAACCCT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCACACACTCATATTTaGCCTGGTCGGTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPHTHI*PGRFPH
Trigger: GTGAGGAAACCGACCAGGGCAAATATGAGTGTGTGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTCCACGTTGTGCTTCTaGCAGTTGCCCACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSTLCF*QLPTGC
Trigger: GCACCCCGTGGGCAACTGGCAGAAGCACAACGTGGA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCACAGAGAAGCGAGCTaGAATATAGGGCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPHREAS*NIGPGH
Trigger: GTGCCCCGGCCCTATATTGCAGCTCGCTTCTCTGTG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTCGAAGCCGCCATACTaGTTCTGGTCGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSKPPY*FWSPGW
Trigger: CCATCCCGGCGACCAGAAGCAGTATGGCGGCTTCGA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGGTTCTGAGTCCTTaGGTTTACTATGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGVLSP*VYYGAS
Trigger: AGAAGCCCCATAGTAAACGCAAGGACTCAGAACCCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262963.10
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGGAGCCATTCTTGTaGAGAGAGAATGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALEPFL*RENVLT
Trigger: CGTCAGGACATTCTCTCTGCACAAGAATGGCTCCAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGGTTCTGAGTCCTTaGGTTTACTGTCGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGVLSP*VYCRVC
Trigger: ACAAACCCGACAGTAAACGCAAGGACTCAGAACCCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTACGCGGTCTCAGGCTaGAAGTTTGTGATGACCATC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAYAVSG*KFVMTI
Trigger: GATGGTCATCACAAACTTGCAGCCTGAGACCGCGTA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCACCTTGGGTTTGCTaGGAGCGCCATCGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPPWVC*ERHRPS
Trigger: TGAAGGGCGATGGCGCTCGCAGCAAACCCAAGGTGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCACTGCTTTCAATCTaGAGGGCTCCTCGAATCGGA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASLLSI*RAPRIG
Trigger: TCCGATTCGAGGAGCCCTGCAGATTGAAAGCAGTGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTCCCCAACCGAGTTCTaGGCCACACACTCGTACACG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPSPTEF*ATHSYT
Trigger: CGTGTACGAGTGTGTGGCCCAGAACTCGGTTGGGGA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACAGTAAGCTTGGCATaGACTGTGATCTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATVSLA*TVISPT
Trigger: GGTTGGGGAGATCACAGTCCATGCCAAGCTTACTGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCAAGCCAGAGGGCAGCTaGTCCTCTCGGAGGACAGTA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVKPEGS*SSRRTV
Trigger: TACTGTCCTCCGAGAGGACCAGCTGCCCTCTGGCTT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCTCGCACGTAGAGGTTaGCAGGTGAGGAGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPLARRG*QVRSSA
Trigger: TGCGCTACTCCTCACCTGCCAACCTCTACGTGCGAG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCTGGCATGATCTCGTaGCTCATGGGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVPGMIS*LMGRME
Trigger: CTCCATCCTGCCCATGAGCCACGAGATCATGCCAGG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTTCTGGTCGCCGGGATaGAACGTGGGTGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGFWSPG*NVGGST
Trigger: TGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCGCCATACTGCTTCTaGTCGCCGGGATGGAACGTG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPPYCF*SPGWNV
Trigger: CACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTGGCTAAGCATGCCTaGAGTCTGGAAGTTAATGCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVAKHA*SLEVNA
Trigger: CGCATTAACTTCCAGACTCCAGGCATGCTTAGCCAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTAGCCAGGAAGGGCGTTaGGTATTCGGGCACGCCATG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSQEGR*VFGHAM
Trigger: CATGGCGTGCCCGAATACCCAACGCCCTTCCTGGCT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTCCAGCAGGGCCTCGTaGATGAAGCTGTACTGGTCC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPSSRAS*MKLYWS
Trigger: GGACCAGTACAGCTTCATCCACGAGGCCCTGCTGGA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCCATCTCCCGCAGCTTaGTCAGCATCACCACGATCG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPPSPAA*SASPRS
Trigger: CGATCGTGGTGATGCTGACCAAGCTGCGGGAGATGG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTGCAGTGGACAGAGATaGGGCCGTCCTGGCCAAACT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPCSGQR*GRPGQT
Trigger: AGTTTGGCCAGGACGGCCCCATCTCTGTCCACTGCA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGTCGTGATGCGGTACTaGGTCCACTTCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVVVMRY*VHFSKA
Trigger: GGCCTTGGAGAAGTGGACCCAGTACCGCATCACGAC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTCATCCGTCTCCCACTaGGCATCGGCCAGCATGACG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSSVSH*ASASMT
Trigger: CGTCATGCTGGCCGATGCCCAGTGGGAGACGGATGA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTTGGCATGGACTGTaGTCTCCCCAACCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVAWHGL*SPQPSS
Trigger: AGAACTCGGTTGGGGAGATCACAGTCCATGCCAAGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCTGATCGCAGCTGTTTaGTGCGTCCATTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPLIAAV*CVHCWH
Trigger: GTGCCAGCAATGGACGCATCAAACAGCTGCGATCAG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCAGCTGGAAGGGGTCTaGGAAGGGACTGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGQLEGV*EGTGCK
Trigger: TTTGCAGCCAGTCCCTTCTCAGACCCCTTCCAGCTG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCATCACACTTGATCCGTaGCTTCTCCTCCAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPITLDP*LLLQPR
Trigger: ACGCGGCTGGAGGAGAAGTCACGGATCAAGTGTGAT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCACCAGGCGGTTCTTaGACTTGTTACAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASPGGS*TCYKAD
Trigger: ATCTGCCTTGTAACAAGTTCAAGAACCGCCTGGTGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGTGTGGGGCTTGAGGTaGGTGATGAGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPVWGLR*VMSFLV
Trigger: CACCAAGAAGCTCATCACGCACCTCAAGCCCCACAC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGCCTCCACGAGACTTaGGCAGTGGCACCATCACAA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGLHET*AVAPSQ
Trigger: TTGTGATGGTGCCACTGCGCAAGTCTCGTGGAGGCC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTCCGAGGTACTCCAGTaGCGCCTGGTAACAGAACTG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVSEVLQ*RLVTEL
Trigger: CAGTTCTGTTACCAGGCGGCACTGGAGTACCTCGGA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGTTCACGTTGCCCCCTaGCATGATCTCGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVVHVAP*HDLVAH
Trigger: ATGAGCCACGAGATCATGCCAGGGGGCAACGTGAAC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTGTTCTCAGTCACCATaGGAGTCCCGGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVCSQSP*ESRELW
Trigger: CCAAAGCTCCCGGGACTCCCATGGTGACTGAGAACA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGTGCTCCGGTTCCATaGTGTAGTAGACGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGAPVP*CSRRGS
Trigger: GCTACCGCGTCTACTACACCATGGAACCGGAGCACC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCCGTAAACTGGAACTaGCGGACCTCGCGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVAVNWN*RTSRFS
Trigger: TGAGAAACGCGAGGTCCGCCAGTTCCAGTTTACGGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATCGACTGTCTTCTCTaGCTTGATCCGCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAIDCLL*LDPLKH
Trigger: ATGCTTGAGCGGATCAAGCCAGAGAAGACAGTCGAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGTCTGCGATGGGAATTaGCGGGTGGCTAAGCATGCT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPVCDGN*RVAKHA
Trigger: AGCATGCTTAGCCACCCGCCAATTCCCATCGCAGAC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTGGTCACAACCACCTTaGGTTTGCTGCGAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPWSQPP*VCCERH
Trigger: ATGGCGCTCGCAGCAAACCCAAGGTGGTTGTGACCA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCAGCACTGCTCCCTTaGTCACAACCACCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVPALLP*SQPPWV
Trigger: AACCCAAGGTGGTTGTGACCAAGGGAGCAGTGCTGG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGGAGAGATTTCACCGTaGTCTGAGCAACCGCCTCAA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPGEISP*SEQPPQ
Trigger: TTGAGGCGGTTGCTCAGATCACGGTGAAATCTCTCC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTGCTCTCATAGGGCATaGTGTTCACCAGGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPCSHRA*CSPGGS
Trigger: AGAACCGCCTGGTGAACATCATGCCCTATGAGAGCA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTTTGGTGCGGGGTTCTaGGTCCTTGCGTTTACTGTC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPFGAGF*VLAFTV
Trigger: GACAGTAAACGCAAGGACTCAGAACCCCGCACCAAA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCTGGATCCTCAGCACTaGCCCTGCACTCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVLDPQH*PCTLIK
Trigger: TTTGATGAGAGTGCAGGGGCAGTGCTGAGGATCCAG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGTCGGTTTCCTCACTaGTTTCAATCTGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVGRFPH*FQSAGL
Trigger: GAGCCCTGCAGATTGAAAGCAGTGAGGAAACCGACC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTGTAGGCATAGAGGCTaGGTGCGGGCACTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGCRHRG*VRALLC
Trigger: ACACAGAAGTGCCCGCACGCAGCCTCTATGCCTACA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCTCCTTAGTCTTATaGACTTGGCCAATGAAGTCG +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACSLVL*TWPMKS
Trigger: CGACTTCATTGGCCAAGTGCATAAGACTAAGGAGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACCATGGCTTTAGGTTaGATAGTGGTCAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATMALG*IVVKAS
Trigger: GGAAGCTTTGACCACTATGCAACCTAAAGCCATGGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGTGCCAGGGCCCCAGGTaGGCGCCATGCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGCQGPR*APCLAA
Trigger: CGCTGCCAAGCATGGCGCCCACCTGGGGCCCTGGCA...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTATAGGACACAGGATCTaGGTTGCCCGAGTCCCACGT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGIGHRI*VARVPR
Trigger: ACGTGGGACTCGGGCAACCCAGATCCTGTGTCCTAT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACGAGACTTGCGCAGTaGCACCATCACAATGAAATA +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATRLAQ*HHHNEI
Trigger: TATTTCATTGTGATGGTGCCACTGCGCAAGTCTCGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCATGCCTGGAGTCTaGAAGTTAATGCGTCTCATT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASMPGV*KLMRLI
Trigger: AATGAGACGCATTAACTTCCAGACTCCAGGCATGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCATGGACTCATACTCCTaGGAGAGCTTGAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPMDSYS*ESLRLS
Trigger: CGACAGCCTCAAGCTCTCCCAGGAGTATGAGTCCAT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTATGCCTTCAATGGGCTaGAGGATGACACGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGMPSMG*RMTREW
Trigger: CCACTCCCGTGTCATCCTCCAGCCCATTGAAGGCAT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCTCGCGTTTCTCACTaGAGCCATTCTTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVPRVSH*SHSCAE
Trigger: CTCTGCACAAGAATGGCTCCAGTGAGAAACGCGAGG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCGTCGTCCTCGGAAATaGTGCAGAAACACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRRPRK*CRNTAA
Trigger: AGCAGCTGTGTTTCTGCACCATTTCCGAGGACGACG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCACCCTCCTCTGGTTCTaGGGAGCACTCCTATTTGCT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPTLLWF*GALLFA
Trigger: AGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCAAAGCGCTGAGAGTTaGCCTTCTTGCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPQSAES*PSCPSC
Trigger: ACAAGAAGGGCAAGAAGGTCAACTCTCAGCGCTTTG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGATTTCACCGTGATCTaGGCAACCGCCTCAATGACG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGDFTVI*ATASMT
Trigger: CGTCATTGAGGCGGTTGCTCAGATCACGGTGAAATC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCAGCTGAGCAGAACTaGTGTCTTCATGATCATTTT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPAEQN*CLHDHF
Trigger: AAAATGATCATGAAGACATCAGTTCTGCTCAGCTGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCAGGGAACTCCCAGCTaGGCAGAACTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGQGTPS*AELMSS
Trigger: TGAAGACATCAGTTCTGCTCAGCTGGGAGTTCCCTG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCTTGTAGGGTGTGGGTaGGTTGTAGTTGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVLVGCG*VVVVRE
Trigger: TTCCCTGACAACTACAACTCACCCACACCCTACAAG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGTGGCACCATCACAATaGAATAGCTCTGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPVAPSQ*NSSGQA
Trigger: TGCCTGTCCAGAGCTATTTCATTGTGATGGTGCCAC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGTGAGATGTCCTGGATaGGCTCTTCCAGATCCATGT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPVRCPG*ALPDPC
Trigger: ACATGGATCTGGAAGAGCTCATCCAGGACATCTCAC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTGTAATCACTGCCCATaGTGCCTTCAATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPCNHCP*CLQWAG
Trigger: TCCAGCCCATTGAAGGCATCATGGGCAGTGATTACA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCTGTTGGGCCAATACTaGTCACACTTGATCCGTGAC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPLLGQY*SHLIRD
Trigger: GTCACGGATCAAGTGTGATCAGTATTGGCCCAACAG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTAGCATCTTCACCGTCTaGAAGATGTCCACCACGCCT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSIFTV*KMSTTP
Trigger: AGGCGTGGTGGACATCTTTCAGACGGTGAAGATGCT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCCACACACTCATATTTaGCCTGGTCGGTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPPHTHI*PGRFPH
Trigger: GTGAGGAAACCGACCAGGGCAAATATGAGTGTGTGG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCTGGAGCCATTCTTGTaGAGAGAGAATGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPLEPFL*RENVLT
Trigger: CGTCAGGACATTCTCTCTGCACAAGAATGGCTCCAG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTACGCGGTCTCAGGCTaGAAGTTTGTGATGACCATC +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPYAVSG*KFVMTI
Trigger: GATGGTCATCACAAACTTGCAGCCTGAGACCGCGTA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGCTGCTGCCGCGATTaGTCAGCACAAAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGCCRD*SAQSCR
Trigger: TCTACAACTTTGTGCTGACCAATCGCGGCAGCAGCC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTAGCCGTGAGATGTCCTaGATGAGCTCTTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSREMS*MSSSRS
Trigger: GGATCTGGAAGAGCTCATCCAGGACATCTCACGGCT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTGTTCAGGAGGCATTTaGTGCGGGGTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGCSGGI*CGVLSP
Trigger: AGGACTCAGAACCCCGCACCAAATGCCTCCTGAACA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCATCGACTGTCTTCTCTaGCTTGATCCGCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPIDCLL*LDPLKH
Trigger: ATGCTTGAGCGGATCAAGCCAGAGAAGACAGTCGAT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGGATTTATATTCGATaGCGTAATAGGACACAGGAT +
Preference number: 4 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAWIYIR*RNRTQD
Trigger: ATCCTGTGTCCTATTACGTCATCGAATATAAATCCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR GCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCACCATGGCTTTAGGTTaGATAGTGGTCAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVTMALG*IVVKAS
Trigger: GGAAGCTTTGACCACTATGCAACCTAAAGCCATGGT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGAGGTCACTCGTGGCTTaGGGTCACCCGTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGRSLVA*GHPWPD
Trigger: GTCAGGCCACGGGTGACCCCAAGCCACGAGTGACCT...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGGGTGTCCTCAGCGGCTaGATCCTCAGCACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGGVLSG*ILSTAP
Trigger: AGGGGCAGTGCTGAGGATCCAGCCGCTGAGGACACC...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTATGGGAATTGGCGGGTaGCTAAGCATGCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGMGIGG*LSMLSK
Trigger: CTTTGAAAGCATGCTTAGCCACCCGCCAATTCCCAT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGGGGTCCTGCGGGGGCTaGTCATGGGACAATGGGGAA +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGGSCGG*SWDNGE
Trigger: TTCCCCATTGTCCCATGACCAGCCCCCGCAGGACCC...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCGGAATCTGGTTTTaGAATTGGAAGGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPGIWF*NWKERR
Trigger: CCTCCTTTCCTTCCAATTCCAAAACCAGATTCCGGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR TCA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCCAGCTGAGCAGAACTaGTGTCTTCATGATCATTTT +
Preference number: 4 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPPAEQN*CLHDHF
Trigger: AAAATGATCATGAAGACATCAGTTCTGCTCAGCTGG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTGCTCCTTAGTCTTATaGACTTGGCCAATGAAGTCG +
Preference number: 4 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGCSLVL*TWPMKS
Trigger: CGACTTCATTGGCCAAGTGCATAAGACTAAGGAGCA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CCA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCTGAATCTGGAGTCTaGAAGTTAATGCGTCTCATT +
Preference number: 4 (lower is better)
Translates to: GKEECAKYLKAAAGAREVPESGV*KLMRLI
Trigger: AATGAGACGCATTAACTTCCAGACTCCAGATTCAGG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR GCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGACCCAGGTGGGCGCCATaGTTGGCAGCGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRPRWAP*LAATSD
Trigger: ATCGGAGGTCGCTGCCAAGCATGGCGCCCACCTGGG...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGCCACAAGGAGGCCCATaGGACCAACCACAGACACCA +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGPQGGP*DQPQTP
Trigger: TGGTGTCTGTGGTTGGTCCCATGGGCCTCCTTGTGG...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGTCCCCAACCGAGTTCTaGGCCACACACTCGTACACG +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGSPTEF*ATHSYT
Trigger: CGTGTACGAGTGTGTGGCCCAGAACTCGGTTGGGGA...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAGGTGGGCGCCATGCTTaGCAGCGACCTCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRGGRHA*QRPPIS
Trigger: GGAGATCGGAGGTCGCTGCCAAGCATGGCGCCCACC...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGCGTCTGCAGAGACAATaGAGGGCTGTGAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGRLQRQ*RAVRGE
Trigger: CTCGCCTCTCACAGCCCTCCATTGTCTCTGCAGACG...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR TCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAGGGTCACCCGTGGCCTaGCACACGAAAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRGSPVA*HTKEAT
Trigger: TGTGGCCTCTTTCGTGTGTCAGGCCACGGGTGACCC...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR TCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGGCTTGGCATGGACTGTaGTCTCCCCAACCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGAWHGL*SPQPSS
Trigger: AGAACTCGGTTGGGGAGATCACAGTCCATGCCAAGC...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR GCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGAGATGGGGCAACGTCTaGAGAGACAATGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGRWGNV*RDNGGL
Trigger: CAGCCCTCCATTGTCTCTGCAGACGTTGCCCCATCT...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAGTTCCAGGTCACTCGTaGCTTGGGGTCACCCGTGGC +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRVPGHS*LGVTRG
Trigger: GCCACGGGTGACCCCAAGCCACGAGTGACCTGGAAC...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGGCTGTGAGAGGCGAGTaGGGAAATCCAGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGAVRGE*GNPGDL
Trigger: AAGGTCTCCTGGATTTCCCCACTCGCCTCTCACAGC...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAGCTTGGGGTCACCCGTaGCCTGACACACGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRAWGHP*PDTRKR
Trigger: CCTCTTTCGTGTGTCAGGCCACGGGTGACCCCAAGC...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAGAGCCGAGCGTCAGATaGGGCAACGTCTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIREPSVR*GNVCRD
Trigger: GTCTCTGCAGACGTTGCCCCATCTGACGCTCGGCTC...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGACCCACCAGTAGGCGCTaGGCCCTGAGACTGTTACTG +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRPTSRR*ALRLLL
Trigger: CAGTAACAGTCTCAGGGCCCAGCGCCTACTGGTGGG...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR TCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAGACAATGGAGGGCTGTaGGAGGCGAGTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRDNGGL*EASGEI
Trigger: GATTTCCCCACTCGCCTCTCACAGCCCTCCATTGTC...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGATCCAGGAGACCTTCATaGAGGAGGCAGAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRSRRPS*RRQREG
Trigger: ACCCTCCCTCTGCCTCCTCCATGAAGGTCTCCTGGA...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR TCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAATCGTCTCAAAGCGCTaGGAGTTGACCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRIVSKR*ELTFLP
Trigger: GGGCAAGAAGGTCAACTCTCAGCGCTTTGAGACGAT...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR TCA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGATTACCTTTCTCGCTTaGACCCATCTGAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGITFLA*THLSWI
Trigger: GATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAAT...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGACCCGACACGCCGATCTaGTCCTTGGGTTCTTTGATA +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRPDTPI*SLGSLI
Trigger: TATCAAAGAACCCAAGGACCAGATCGGCGTGTCGGG...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR TCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGACAAAGCGCTGAGAGTTaGCCTTCTTGCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRQSAES*PSCPSC
Trigger: ACAAGAAGGGCAAGAAGGTCAACTCTCAGCGCTTTG...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAACAGTAAGCTTGGCATaGACTGTGATCTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRTVSLA*TVISPT
Trigger: GGTTGGGGAGATCACAGTCCATGCCAAGCTTACTGT...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR TCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGATCGCTTGAACCCATCTaGGTTGGATCAGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRSLEPI*VGSAFC
Trigger: ACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGA...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAGAGACTGTTACTGGTTaGATAAGGGAGATCAAGGTC +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRETVTG*IREIKV
Trigger: GACCTTGATCTCCCTTATCCAACCAGTAACAGTCTC...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CCA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAAAGCCAGCCACTCCATaGAATTTTAATTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRKPATP*NFNSAH
Trigger: ATGTGCAGAATTAAAATTCCATGGAGTGGCTGGCTT...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
3UTR CAA 72 bp GGAATTTTAATTCTGCACATCAATTACCTTTCTCGCTaGAACCCATCTGAGTTGGATCAGCCTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: GILILHINYLSR*NPSELDQPFVI
Trigger: GATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATTGATGTGCAGAATTAAAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS TCA 90 bp GGGCTGACGGTTTGGACTGCAGCGTGCGCTGCCGCACCACGGGGGTaGAGGCGCCCAGGCCCTGCGGCGAGCGGGCCGCCAGGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: GLTVWTAACAAAPRG*RRPGPAASGPPGGR
Trigger: CCTTCCGCCTGGCGGCCCGCTCGCCGCAGGGCCTGGGCGCCTTCACCCCCGTGGTGCGGCAGCGCACGCTGCAGTCCAAACCGTCAGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 90 bp TGCAGCGTGCGCTGCCGCACCACGGGGGTGAAGGCGCCCAGGCCCTaGGGCGAGCGGGCCGCCAGGCGGAAGGCGTACTCCGTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: CSVRCRTTGVKAPRP*GERAARRKAYSVLG
Trigger: GCCCAACACGGAGTACGCCTTCCGCCTGGCGGCCCGCTCGCCGCAGGGCCTGGGCGCCTTCACCCCCGTGGTGCGGCAGCGCACGCTGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS GCA 90 bp GGTCCTCCGCGGTGCCAGCCGGGGGCTCCCAGCGTGCCAGCAGGCTaGCCTCGGGGGTCTGCTGCACCGACAGGGTTGGGCGGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GPPRCQPGAPSVPAG*PRGSAAPTGLGGPA
Trigger: TGCTGGGCCGCCCAACCCTGTCGGTGCAGCAGACCCCCGAGGGCAGCCTGCTGGCACGCTGGGAGCCCCCGGCTGGCACCGCGGAGGACC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS TCA 90 bp TCTTGGGCGAGATGGACTGCAGCGTGCGCTGCCGCACCACGGGGGTaGAGGCGCCCAGGCCCTGCGGCGAGCGGGCCGCCAGGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: SWARWTAACAAAPRG*RRPGPAASGPPGGR
Trigger: CCTTCCGCCTGGCGGCCCGCTCGCCGCAGGGCCTGGGCGCCTTCACCCCCGTGGTGCGGCAGCGCACGCTGCAGTCCATCTCGCCCAAGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588552.5
ENST00000592099.5
CDS TCA 90 bp GGGCAGGGCCCAGGGCACCGGCCTCCCGCACGGCCACCGTGTATTTaGCGATGGCCCCGTTGCGCTCGGCGGGCACGGGTGGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GQGPGHRPPARPPCI*RWPRCARRARVAAS
Trigger: GCTGGCTGCCACCCGTGCCCGCCGAGCGCAACGGGGCCATCGTCAAATACACGGTGGCCGTGCGGGAGGCCGGTGCCCTGGGCCCTGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 90 bp GCACGGGTGGCAGCCAGCGGAGAAGGACGGTCCCGGCCGAGGCGTTaGCGGCCGCCTCCAGAATCTGCGGGTGGCCACGGGGCGTGTCCT +
Preference number: 5 (lower is better)
Translates to: ARVAASGEGRSRPRR*RPPPESAGGHGACP
Trigger: AGGACACGCCCCGTGGCCACCCGCAGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGACCGTCCTTCTCCGCTGGCTGCCACCCGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 90 bp CTGGGCTCCCCCGGCTCTGCCCCGCTTCACATCGTGGCTGTTGCATaGGATCCGAGCGGAGCCCGAGCGCCAGCGGCTCGCGGCGTGCGC +
Preference number: 5 (lower is better)
Translates to: LGSPGSAPLHIVAVA*DPSGARAPAARGVR
Trigger: GCGCACGCCGCGAGCCGCTGGCGCTCGGGCTCCGCTCGGATCCCATGCAACAGCCACGATGTGAAGCGGGGCAGAGCCGGGGGAGCCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CCA 90 bp ACGGTCCCGGCCGAGGCGTTGCCGGCCGCCTCCAGAATCTGCGGGTaGCCACGGGGCGTGTCCTCCGGGATGCTCAGGACCTCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TVPAEALPAASRICG*PRGVSSGMLRTSAA
Trigger: GGCAGCCGAGGTCCTGAGCATCCCGGAGGACACGCCCCGTGGCCACCCGCAGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGACCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 90 bp TGGGCTGGGCTCCCCCGGCTCTGCCCCGCTTCACATCGTGGCTGTTaGATGGGATCCGAGCGGAGCCCGAGCGCCAGCGGCTCGCGGCGT +
Preference number: 5 (lower is better)
Translates to: WAGLPRLCPASHRGC*MGSERSPSASGSRR
Trigger: ACGCCGCGAGCCGCTGGCGCTCGGGCTCCGCTCGGATCCCATGCAACAGCCACGATGTGAAGCGGGGCAGAGCCGGGGGAGCCCAGCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS GCA 90 bp AGAAGGACGGTCCCGGCCGAGGCGTTGCCGGCCGCCTCCAGAATCTaGGGGTGGCCACGGGGCGTGTCCTCCGGGATGCTCAGGACCTCG +
Preference number: 5 (lower is better)
Translates to: RRTVPAEALPAASRI*GWPRGVSSGMLRTS
Trigger: CGAGGTCCTGAGCATCCCGGAGGACACGCCCCGTGGCCACCCGCAGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGACCGTCCTTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 90 bp CACCGTGTATTTGACGATGGCCCCGTTGCGCTCGGCGGGCACGGGTaGCAGCCAGCGGAGAAGGACGGTCCCGGCCGAGGCGTTGCCGGC +
Preference number: 5 (lower is better)
Translates to: HRVFDDGPVALGGHG*QPAEKDGPGRGVAG
Trigger: GCCGGCAACGCCTCGGCCGGGACCGTCCTTCTCCGCTGGCTGCCACCCGTGCCCGCCGAGCGCAACGGGGCCATCGTCAAATACACGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS TCA 90 bp GCACTTGGAGGTCATAGGCCGTGTCGGGCTTCAGGCCCTGCAGCGTaGGCGCGTTCTCCGCGCCCGGCTCAGCCGCTGCCGGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: ALGGHRPCRASGPAA*ARSPRPAQPLPAAQ
Trigger: CTGAGCTGCCGGCAGCGGCTGAGCCGGGCGCGGAGAACGCGCTCACGCTGCAGGGCCTGAAGCCCGACACGGCCTATGACCTCCAAGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 90 bp TGGGACCAACCACAGACACCATGCCAGGGCCCCAGGTGGGCGCCATaGTTGGCAGCGACCTCCGATCTCCGCCCTGGAGGGGGATGGCCC +
Preference number: 5 (lower is better)
Translates to: WDQPQTPCQGPRWAP*LAATSDLRPGGGWP
Trigger: GGGCCATCCCCCTCCAGGGCGGAGATCGGAGGTCGCTGCCAAGCATGGCGCCCACCTGGGGCCCTGGCATGGTGTCTGTGGTTGGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586065.1
ENST00000587303.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
CDS CCA 90 bp GGAGGCCCATGGGACCAACCACAGACACCATGCCAGGGCCCCAGGTaGGCGCCATGCTTGGCAGCGACCTCCGATCTCCGCCCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GGPWDQPQTPCQGPR*APCLAATSDLRPGG
Trigger: CCCTCCAGGGCGGAGATCGGAGGTCGCTGCCAAGCATGGCGCCCACCTGGGGCCCTGGCATGGTGTCTGTGGTTGGTCCCATGGGCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586065.1
ENST00000587303.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
CDS CCA 90 bp CGCCTGATGCCGTGTAGCGGTCCTCGGAGGGCGGGAACTCCAGGGTaGCCAGGGGCGTCGAGTCCTCACGGCCAAACTGCAGGCGGTAGC +
Preference number: 5 (lower is better)
Translates to: RLMPCSGPRRAGTPG*PGASSPHGQTAGGS
Trigger: GCTACCGCCTGCAGTTTGGCCGTGAGGACTCGACGCCCCTGGCCACCCTGGAGTTCCCGCCCTCCGAGGACCGCTACACGGCATCAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCGCGGATCAGGCCGTaGGGCTCCACCGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPRIRP*GSTGSS
Trigger: GGAGGAGCCGGTGGAGCCCAACGGCCTGATCCGCGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGATGGCCGTGGCGTaGAGCGCCTCCGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARMAVA*SASAST
Trigger: GGTGGAGGCGGAGGCGCTCAACGCCACGGCCATCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCCAGCATGACGTCCTaGATGCGCGGCGGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAASMTS*MRGGPR
Trigger: CCGCGGGCCGCCGCGCATCAAGGACGTCATGCTGGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTCCCGGCCGAGGCGTaGCCGGCCGCCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVPAEA*PAASRI
Trigger: GATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 90 bp ATGGGGCAACGTCTGGAGGCTGGCTGGGCTGGGCTCCCCCGGCTCTaGCCCGCTTCACATCGTGGCTGTTGCATGGGATCCGAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: MGQRLEAGWAGLPRL*PASHRGCCMGSERS
Trigger: GCTCCGCTCGGATCCCATGCAACAGCCACGATGTGAAGCGGGGCAGAGCCGGGGGAGCCCAGCCCAGCCAGCCTCCAGACGTTGCCCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCTGAGCATCCGGGCTaGCACGTTCCGCGGCGCGCT +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAEHPG*HVPRRA
Trigger: AGCGCGCCGCGGAACGTGCAAGCCCGGATGCTCAGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCTGCACCGACAGGGTaGGGCGGCCCAGCACTGCTC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAAPTG*GGPALL
Trigger: GAGCAGTGCTGGGCCGCCCAACCCTGTCGGTGCAGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTGACGATGGCCCCGTaGCGCTCGGCGGGCACGGGT +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALTMAP*RSAGTG
Trigger: ACCCGTGCCCGCCGAGCGCAACGGGGCCATCGTCAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCGTCAGCATCAGGCTaGGGGGCGACGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPSASG*GATLGL
Trigger: CAAGCCCAGCGTCGCCCCCAAGCCTGATGCTGACGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGCGGGCACTTCTGTGTaGCCACAGCCCACGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAAGTSV*PQPTAS
Trigger: GGAGGCCGTGGGCTGTGGCAACACAGAAGTGCCCGC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCCCTCCCCCGACTTaGGCACACCCTGTTCCGGCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASPPPT*AHPVPA
Trigger: GGCCGGAACAGGGTGTGCCAAAGTCGGGGGAGGGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS GCA 90 bp CTGGTCGCCGGGATGGAACGTGGGTGGCAGCACAGAGAAGCGAGCTaGAATATAGGGCCGGGGCACCTCCAGCTGACGCGAGTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LVAGMERGWQHREAS*NIGPGHLQLTRVPQ
Trigger: CTGCGGCACTCGCGTCAGCTGGAGGTGCCCCGGCCCTATATTGCAGCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 90 bp CACATCCTCGTCGGTGCGGACGACCACGGGCGAGCTCTCGGGCCCTaGTCCCACCTCTGTGTGAGCGACAGTCGTGATGCGGTACTGGGT +
Preference number: 5 (lower is better)
Translates to: HILVGADDHGRALGP*SHLCVSDSRDAVLG
Trigger: ACCCAGTACCGCATCACGACTGTCGCTCACACAGAGGTGGGACCAGGGCCCGAGAGCTCGCCCGTGGTCGTCCGCACCGACGAGGATGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGGTGGGCGCCATGCTaGGCAGCGACCTCCGATCTC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARWAPC*AATSDL
Trigger: GAGATCGGAGGTCGCTGCCAAGCATGGCGCCCACCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCCTGGCCGATGGAGTaGACGGCCGACACCCAGATC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPWPME*TADTQI
Trigger: GATCTGGGTGTCGGCCGTCAACTCCATCGGCCAGGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCGCGGATCAGGCCGTaGGGCTCCACCGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVPRIRP*GSTGSS
Trigger: GGAGGAGCCGGTGGAGCCCAACGGCCTGATCCGCGG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGGCGACGCTGGGCTaGCCGTTGAGCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGATLG*PLSRLK
Trigger: CTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGGCTGTCGTTGGCCTaGAGCCGCTCCGTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARLSLA*SRSVCS
Trigger: GGAGCACACGGAGCGGCTCAAGGCCAACGACAGCCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCGGCATCTGGCGGGTaGCAGGTCTTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPASGG*QVLTLR
Trigger: GCGGAGAGTCAAGACCTGCAACCCGCCAGATGCCGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGCCAGCATGACGTCCTaGATGCGCGGCGGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPASMTS*MRGGPR
Trigger: CCGCGGGCCGCCGCGCATCAAGGACGTCATGCTGGC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS GCA 90 bp GGCTTGCCGTTGAGCAGGTTGAAGGCAGTCCAGGCGGTGACCGTCTaGTGGAGGCCGCCCAGGCTGCTGCCGCGATTGGTCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: GLPLSRLKAVQAVTV*WRPPRLLPRLVSTK
Trigger: CTTTGTGCTGACCAATCGCGGCAGCAGCCTGGGCGGCCTCCAGCAGACGGTCACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 90 bp CTTCTGCTGCACAGCCTCCAACGAGCAGGACCACAAGGAGGCCCATaGGACCAACCACAGACACCATGCCAGGGCCCCAGGTGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: LLLHSLQRAGPQGGP*DQPQTPCQGPRWAP
Trigger: TGGCGCCCACCTGGGGCCCTGGCATGGTGTCTGTGGTTGGTCCCATGGGCCTCCTTGTGGTCCTGCTCGTTGGAGGCTGTGCAGCAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262963.10
ENST00000586065.1
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
ENST00000592099.5
CDS CCA 90 bp TGGCCGGGCTCCAGGCCCCGGTTATCGAAGCCGCCATACTGCTTCTaGTCGCCGGGATGGAACGTGGGTGGCAGCACAGAGAAGCGAGCT +
Preference number: 5 (lower is better)
Translates to: WPGSRPRLSKPPYCF*SPGWNVGGSTEKRA
Trigger: AGCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGGCTTCGATAACCGGGGCCTGGAGCCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATCTCGTACTCCGAGTaGGGGCTCAGGCCGCCGATG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAISYSE*GLRPPM
Trigger: CATCGGCGGCCTGAGCCCCAACTCGGAGTACGAGAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGCTGAGCATCCGGGCTaGCACGTTCCGCGGCGCGCT +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPAEHPG*HVPRRA
Trigger: AGCGCGCCGCGGAACGTGCAAGCCCGGATGCTCAGC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTGTGCTTCTGCCAGTaGCCCACGGGGTGCTCCGGT +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALCFCQ*PTGCSG
Trigger: ACCGGAGCACCCCGTGGGCAACTGGCAGAAGCACAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAGCGGGGTCAGGAATaGGCCTCCACGAGACTTGCG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQRGQE*ASTRLA
Trigger: CGCAAGTCTCGTGGAGGCCAATTCCTGACCCCGCTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGCTTGAGGCTGTCGTaGGCCTTGAGCCGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASLRLS*ALSRSV
Trigger: CACGGAGCGGCTCAAGGCCAACGACAGCCTCAAGCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCGGGTTGCAGGTCTaGACTCTCCGCAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGGLQV*TLRRKA
Trigger: GGCTTTCCTGCGGAGAGTCAAGACCTGCAACCCGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCACACCCCGGATGGGTaGCAGACAGACCCGTGTGCT +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAHTPDG*QTDPCA
Trigger: AGCACACGGGTCTGTCTGCAACCCATCCGGGGTGTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACAACCACCTTGGGTTaGCTGCGAGCGCCATCGCCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATTTLG*LRAPSP
Trigger: GGGCGATGGCGCTCGCAGCAAACCCAAGGTGGTTGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGCACCGACAGGGTaGGGCGGCCCAGCACTGCTC +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVAAPTG*GGPALL
Trigger: GAGCAGTGCTGGGCCGCCCAACCCTGTCGGTGCAGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACATACGTGGCCCCCTaGTGCACGCCTGATGCCGTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATYVAP*CTPDAV
Trigger: CACGGCATCAGGCGTGCACAAGGGGGCCACGTATGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACGGCCACCGTGTATTaGACGATGGCCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATATVY*TMAPLR
Trigger: GCGCAACGGGGCCATCGTCAAATACACGGTGGCCGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGTGTGGGCTCGCACTaGGAGGTCATAGGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARVGSH*EVIGRV
Trigger: GACACGGCCTATGACCTCCAAGTGCGAGCCCACACG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGTTCTTGGGCGAGACTaGGTCCCGCAGGAACGTCCG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAVLGRD*VPQERP
Trigger: CGGACGTTCCTGCGGGACCAAGTCTCGCCCAAGAAC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 90 bp CCCTCCTCGCCATCCACGATGGGCTGGGGGTCCGGGTTATCCAGCTaGAAGGGGTCTGAGAAGGGACTGGCTGCAAAGGTAGGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: PSSPSTMGWGSGLSS*KGSEKGLAAKVGSL
Trigger: GAGCGAGCCTACCTTTGCAGCCAGTCCCTTCTCAGACCCCTTCCAGCTGGATAACCCGGACCCCCAGCCCATCGTGGATGGCGAGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000589851.1
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGAGTCCCGGGAGCTTaGGGGAGAGATTTCACCGTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGVPGA*GRDFTV
Trigger: CACGGTGAAATCTCTCCCCAAAGCTCCCGGGACTCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGACACAGGATCTGGGTaGCCCGAGTCCCACGTGATG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGADTGSG*PESHVM
Trigger: CATCACGTGGGACTCGGGCAACCCAGATCCTGTGTC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAGGCTGTCGTCCACGTaGTGCTTCTGCCAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARLSST*CFCQLP
Trigger: GGGCAACTGGCAGAAGCACAACGTGGACGACAGCCT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAAGGCGTACTCCGTGTaGGGCTTCAGGTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAKAYSV*GFRSST
Trigger: GGTGGAGGACCTGAAGCCCAACACGGAGTACGCCTT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTGCCGTTGAGCAGGTaGAAGGCAGTCCAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALPLSR*KAVQAV
Trigger: CACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACGCTGGGCTTGCCGTaGAGCAGGTTGAAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATLGLP*SRLKAV
Trigger: GACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGGCCTCCACGAGACTaGCGCAGTGGCACCATCACA +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAWPPRD*RSGTIT
Trigger: TGTGATGGTGCCACTGCGCAAGTCTCGTGGAGGCCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGGGCGAGGTCGGCATaGTTCAGGAGGCATTTGGTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGARSA*FRRHLV
Trigger: CACCAAATGCCTCCTGAACAATGCCGACCTCGCCCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAAGCCAGGAAGGGCGTaGGGTATTCGGGCACGCCAT +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAKPGRA*GIRARH
Trigger: ATGGCGTGCCCGAATACCCAACGCCCTTCCTGGCTT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCGGGCACTTCTGTGTaGCCACAGCCCACGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVAGTSV*PQPTAS
Trigger: GGAGGCCGTGGGCTGTGGCAACACAGAAGTGCCCGC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGAATGTGCCAAGTATTaGAAGGCGGCGGCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAECAKY*KAAAGA
Trigger: GGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGATGCCGTTCACCTCCTaGGGTTCCGGGTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAMPFTS*GSGSSE
Trigger: CTCAGAGGACCCGGAACCCAAGGAGGTGAACGGCAT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCCAGCACTGCTCCCTaGGTCACAACCACCTTGGGT +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPSTAP*VTTTLG
Trigger: ACCCAAGGTGGTTGTGACCAAGGGAGCAGTGCTGGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 90 bp CCACGGTGGTCAGCAGGCTGTCGTCCACGTTGTGCTTCTGCCAGTTaGCCACGGGGTGCTCCGGTTCCATGGTGTAGTAGACGCGGTAGC +
Preference number: 5 (lower is better)
Translates to: PRWSAGCRPRCASAS*PRGAPVPWCSRRGS
Trigger: GCTACCGCGTCTACTACACCATGGAACCGGAGCACCCCGTGGGCAACTGGCAGAAGCACAACGTGGACGACAGCCTGCTGACCACCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 90 bp TTGCCGTTGAGCAGGTTGAAGGCAGTCCAGGCGGTGACCGTCTGCTaGAGGCCGCCCAGGCTGCTGCCGCGATTGGTCAGCACAAAGTTG +
Preference number: 5 (lower is better)
Translates to: LPLSRLKAVQAVTVC*RPPRLLPRLVSTKL
Trigger: CAACTTTGTGCTGACCAATCGCGGCAGCAGCCTGGGCGGCCTCCAGCAGACGGTCACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCAGGTGATGTTCACGTaGCCCCCTGGCATGATCTCG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAQVMFT*PPGMIS
Trigger: CGAGATCATGCCAGGGGGCAACGTGAACATCACCTG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCCCTGGCCGATGGAGTaGACGGCCGACACCCAGATC +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPPWPME*TADTQI
Trigger: GATCTGGGTGTCGGCCGTCAACTCCATCGGCCAGGG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCAGGCTGTCGTTGGCCTaGAGCCGCTCCGTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVRLSLA*SRSVCS
Trigger: GGAGCACACGGAGCGGCTCAAGGCCAACGACAGCCT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTAGCCCTCCCCCGACTTaGGCACACCCTGTTCCGGCC +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGSPPPT*AHPVPA
Trigger: GGCCGGAACAGGGTGTGCCAAAGTCGGGGGAGGGCT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTGGTCACAACCACCTaGGGTTTGCTGCGAGCGCCA +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALVTTT*GLLRAP
Trigger: TGGCGCTCGCAGCAAACCCAAGGTGGTTGTGACCAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 90 bp GAGGCTGTCGTTGGCCTTGAGCCGCTCCGTGTGCTCCGCCATGTCTaGGATGGGAATTGGCGGGTGGCTAAGCATGCCTGGAGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: EAVVGLEPLRVLRHV*DGNWRVAKHAWSLE
Trigger: TTCCAGACTCCAGGCATGCTTAGCCACCCGCCAATTCCCATCGCAGACATGGCGGAGCACACGGAGCGGCTCAAGGCCAACGACAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000589851.1
ENST00000592099.5
CDS CCA 90 bp ATCGAAGCCGCCATACTGCTTCTGGTCGCCGGGATGGAACGTGGGTaGCAGCACAGAGAAGCGAGCTGCAATATAGGGCCGGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: IEAAILLLVAGMERG*QHREASCNIGPGHL
Trigger: GAGGTGCCCCGGCCCTATATTGCAGCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGGCTTCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 90 bp CGGGTTGCAGGTCTTGACTCTCCGCAGGAAAGCCAGGAAGGGCGTTaGGTATTCGGGCACGCCATGGTCCGGCCACGCCGTAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: RVAGLDSPQESQEGR*VFGHAMVRPRRKLE
Trigger: TTCCAGTTTACGGCGTGGCCGGACCATGGCGTGCCCGAATACCCAACGCCCTTCCTGGCTTTCCTGCGGAGAGTCAAGACCTGCAACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACCTTCTTGCCCTTCTaGTTCCAGGTCACTCGTGGC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATFLPF*FQVTRG
Trigger: GCCACGAGTGACCTGGAACAAGAAGGGCAAGAAGGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGAGGACAGTAAGCTaGGCATGGACTGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARRTVS*AWTVIS
Trigger: GGAGATCACAGTCCATGCCAAGCTTACTGTCCTCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACAGGCAGGAAGTCCTaGAACCAGGTGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATGRKS*NQVISG
Trigger: CCCTGAGATCACCTGGTTCAAGGACTTCCTGCCTGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCCTGATCGCAGCTGTTaGATGCGTCCATTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAPDRSC*MRPLLA
Trigger: TGCCAGCAATGGACGCATCAAACAGCTGCGATCAGG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTTGTGCTTCTGCCAGTaGCCCACGGGGTGCTCCGGT +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPLCFCQ*PTGCSG
Trigger: ACCGGAGCACCCCGTGGGCAACTGGCAGAAGCACAA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGCGTGATGAGCTTCTaGGTGGTACGGCCATCCACA +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACVMSF*VVRPST
Trigger: TGTGGATGGCCGTACCACCAAGAAGCTCATCACGCA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGGGCGACGCTGGGCTaGCCGTTGAGCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGATLG*PLSRLK
Trigger: CTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCAGCGGGGTCAGGAATaGGCCTCCACGAGACTTGCG +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVQRGQE*ASTRLA
Trigger: CGCAAGTCTCGTGGAGGCCAATTCCTGACCCCGCTG...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGGGTTCTGAGTCCTaGCGTTTACTATGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARGSES*RLLWGF
Trigger: GAAGCCCCATAGTAAACGCAAGGACTCAGAACCCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262963.10
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTGTTCAGGAGGCATTaGGTGCGGGGTTCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALFRRH*VRGSES
Trigger: GGACTCAGAACCCCGCACCAAATGCCTCCTGAACAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCAGCTTGAGGCTGTCGTaGGCCTTGAGCCGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPSLRLS*ALSRSV
Trigger: CACGGAGCGGCTCAAGGCCAACGACAGCCTCAAGCT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGGCGGGTTGCAGGTCTaGACTCTCCGCAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPGGLQV*TLRRKA
Trigger: GGCTTTCCTGCGGAGAGTCAAGACCTGCAACCCGCC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCGGCATCTGGCGGGTaGCAGGTCTTGACTCTCCGC +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPASGG*QVLTLR
Trigger: GCGGAGAGTCAAGACCTGCAACCCGCCAGATGCCGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGAGTTAGCCAGCCGCTaGAACTCGAGTTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAELASR*NSSSMP
Trigger: TGGCATGGAACTCGAGTTCAAGCGGCTGGCTAACTC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACCACGATCGTCGAATaGTTCTCCCACAGCATGCGC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATTIVE*FSHSMR
Trigger: GCGCATGCTGTGGGAGAACAATTCGACGATCGTGGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCGGGGTTCTGAGTCCTaGCGTTTACTGTCGGGTTTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGARGSES*RLLSGL
Trigger: CAAACCCGACAGTAAACGCAAGGACTCAGAACCCCG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCACGGCCACCGTGTATTaGACGATGGCCCCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPTATVY*TMAPLR
Trigger: GCGCAACGGGGCCATCGTCAAATACACGGTGGCCGT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGTTCTTGGGCGAGACTaGGTCCCGCAGGAACGTCCG +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVVLGRD*VPQERP
Trigger: CGGACGTTCCTGCGGGACCAAGTCTCGCCCAAGAAC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTCACCTTGAAGTTCTaGGGCGAGACTTGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAFTLKF*GETWSR
Trigger: GCGGGACCAAGTCTCGCCCAAGAACTTCAAGGTGAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 90 bp GGTTATCGAAGCCGCCATACTGCTTCTGGTCGCCGGGATGGAACGTaGGTGGCAGCACAGAGAAGCGAGCTGCAATATAGGGCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: GYRSRHTASGRRDGT*VAAQRSELQYRAGA
Trigger: TGCCCCGGCCCTATATTGCAGCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGGCTTCGATAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTATCTCGTACTCCGAGTaGGGGCTCAGGCCGCCGATG +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGISYSE*GLRPPM
Trigger: CATCGGCGGCCTGAGCCCCAACTCGGAGTACGAGAT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAAGAGGAGCTCGTACTaGATGATACTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAKRSSY*MILSCR
Trigger: GCGGCAGGAGAGTATCATCAAGTACGAGCTCCTCTT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCAAGGCGTACTCCGTGTaGGGCTTCAGGTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVKAYSV*GFRSST
Trigger: GGTGGAGGACCTGAAGCCCAACACGGAGTACGCCTT...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTCACCTTGAAGTTCTaGGGCGAGATGGACTGCAGC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAFTLKF*GEMDCS
Trigger: GCTGCAGTCCATCTCGCCCAAGAACTTCAAGGTGAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262963.10
ENST00000592099.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTTGCCGTTGAGCAGGTaGAAGGCAGTCCAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVLPLSR*KAVQAV
Trigger: CACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCACGCTGGGCTTGCCGTaGAGCAGGTTGAAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPTLGLP*SRLKAV
Trigger: GACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGGGCGAGGTCGGCATaGTTCAGGAGGCATTTGGTG +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVGARSA*FRRHLV
Trigger: CACCAAATGCCTCCTGAACAATGCCGACCTCGCCCC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCATGCCGTTCACCTCCTaGGGTTCCGGGTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPMPFTS*GSGSSE
Trigger: CTCAGAGGACCCGGAACCCAAGGAGGTGAACGGCAT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTACATACGTGGCCCCCTaGTGCACGCCTGATGCCGTG +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGTYVAP*CTPDAV
Trigger: CACGGCATCAGGCGTGCACAAGGGGGCCACGTATGT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGTGTGGGCTCGCACTaGGAGGTCATAGGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGRVGSH*EVIGRV
Trigger: GACACGGCCTATGACCTCCAAGTGCGAGCCCACACG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCTGATCGCAGCTGTTaGATGCGTCCATTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASDRSC*MRPLLA
Trigger: TGCCAGCAATGGACGCATCAAACAGCTGCGATCAGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS TCA 90 bp ATCCACGATGGGCTGGGGGTCCGGGTTATCCAGCTGGAAGGGGTCTaGGAAGGGACTGGCTGCAAAGGTAGGCTCGCTCTTCTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: IHDGLGVRVIQLEGV*EGTGCKGRLALLKH
Trigger: GTGCTTCAGAAGAGCGAGCCTACCTTTGCAGCCAGTCCCTTCTCAGACCCCTTCCAGCTGGATAACCCGGACCCCCAGCCCATCGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000589851.1
ENST00000592099.5
CDS TCA 90 bp CTGTGGGCACACTATCAGCCCATTCCCTGTCCTCTTCCTCTTGCCTaGAGCCTCCACGGGGGAGGGCTGGTTCTTACCTGTCGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: LWAHYQPIPCPLPLA*SLHGGGLVLTCRVC
Trigger: GCAAACCCGACAGGTAAGAACCAGCCCTCCCCCGTGGAGGCTTCAGGCAAGAGGAAGAGGACAGGGAATGGGCTGATAGTGTGCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS GCA 90 bp TCTCCTGTGGGCACACTATCAGCCCATTCCCTGTCCTCTTCCTCTTaGCTGAAGCCTCCACGGGGGAGGGCTGGTTCTTACCTGTCGGGT +
Preference number: 5 (lower is better)
Translates to: SPVGTLSAHSLSSSS*LKPPRGRAGSYLSG
Trigger: ACCCGACAGGTAAGAACCAGCCCTCCCCCGTGGAGGCTTCAGGCAAGAGGAAGAGGACAGGGAATGGGCTGATAGTGTGCCCACAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CCA 90 bp GCGCTGAGAGTTGACCTTCTTGCCCTTCTTGTTCCAGGTCACTCGTaGCTTGGGGTCACCCGTGGCCTGACACACGAAAGAGGCCACACC +
Preference number: 5 (lower is better)
Translates to: ALRVDLLALLVPGHS*LGVTRGLTHERGHT
Trigger: GGTGTGGCCTCTTTCGTGTGTCAGGCCACGGGTGACCCCAAGCCACGAGTGACCTGGAACAAGAAGGGCAAGAAGGTCAACTCTCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262963.10
ENST00000586065.1
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
ENST00000592099.5
CDS CCA 90 bp GCTACCCAGCGGGGTCAGGAATTGGCCTCCACGAGACTTGCGCAGTaGCACCATCACAATGAAATAGCTCTGGACAGGCACGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ATQRGQELASTRLAQ*HHHNEIALDRHGAL
Trigger: CAGAGCCCCGTGCCTGTCCAGAGCTATTTCATTGTGATGGTGCCACTGCGCAAGTCTCGTGGAGGCCAATTCCTGACCCCGCTGGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 90 bp AGGCCTCGAGCCGAGCGTCAGATGGGGCAACGTCTGCAGAGACAATaGAGGGCTGTGAGAGGCGAGTGGGGAAATCCAGGAGACCTTCAT +
Preference number: 5 (lower is better)
Translates to: RPRAERQMGQRLQRQ*RAVRGEWGNPGDLH
Trigger: ATGAAGGTCTCCTGGATTTCCCCACTCGCCTCTCACAGCCCTCCATTGTCTCTGCAGACGTTGCCCCATCTGACGCTCGGCTCGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGACGCCGATCTGGTCCTaGGGTTCTTTGATAAACCTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGATPIWS*GSLINL
Trigger: CAGGTTTATCAAAGAACCCAAGGACCAGATCGGCGT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTGTTTGATGCGTCCATaGCTGGCACTAGGATCCACA +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGACLMRP*LALGST
Trigger: TGTGGATCCTAGTGCCAGCAATGGACGCATCAAACA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGGAGTCCCGGGAGCTTaGGGGAGAGATTTCACCGTG +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGGVPGA*GRDFTV
Trigger: CACGGTGAAATCTCTCCCCAAAGCTCCCGGGACTCC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGACACAGGATCTGGGTaGCCCGAGTCCCACGTGATG +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGDTGSG*PESHVM
Trigger: CATCACGTGGGACTCGGGCAACCCAGATCCTGTGTC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGGGCCCGTCTTGGCTCTaGGATTTATATTCGATGACG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAGPSWL*DLYSMT
Trigger: CGTCATCGAATATAAATCCAAGAGCCAAGACGGGCC...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTCACTGGAGCCATTCTaGTGCAGAGAGAATGTCCTG +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGASLEPF*CRENVL
Trigger: CAGGACATTCTCTCTGCACAAGAATGGCTCCAGTGA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTGAATGTGCCAAGTATTaGAAGGCGGCGGCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGECAKY*KAAAGA
Trigger: GGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCCCAGCACTGCTCCCTaGGTCACAACCACCTTGGGT +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGPSTAP*VTTTLG
Trigger: ACCCAAGGTGGTTGTGACCAAGGGAGCAGTGCTGGG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS CCA 90 bp TTCCCTGTCCTCTTCCTCTTGCCTGAAGCCTCCACGGGGGAGGGCTaGTTCTTACCTGTCGGGTTTGCTGTTCCCGAAAGCAGACACAGG +
Preference number: 5 (lower is better)
Translates to: FPVLFLLPEASTGEG*FLPVGFAVPESRHR
Trigger: CCTGTGTCTGCTTTCGGGAACAGCAAACCCGACAGGTAAGAACCAGCCCTCCCCCGTGGAGGCTTCAGGCAAGAGGAAGAGGACAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCACCTTCTTGCCCTTCTaGTTCCAGGTCACTCGTGGC +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPTFLPF*FQVTRG
Trigger: GCCACGAGTGACCTGGAACAAGAAGGGCAAGAAGGT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCCGGAGGACAGTAAGCTaGGCATGGACTGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPRRTVS*AWTVIS
Trigger: GGAGATCACAGTCCATGCCAAGCTTACTGTCCTCCG...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCAGGTGATGTTCACGTaGCCCCCTGGCATGATCTCG +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGQVMFT*PPGMIS
Trigger: CGAGATCATGCCAGGGGGCAACGTGAACATCACCTG...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGCTGATACGGCCCGTCTaGGCTCTTGGATTTATATTC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGALIRPV*ALGFIF
Trigger: GAATATAAATCCAAGAGCCAAGACGGGCCGTATCAG...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCTGCGTGATGAGCTTCTaGGTGGTACGGCCATCCACA +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPCVMSF*VVRPST
Trigger: TGTGGATGGCCGTACCACCAAGAAGCTCATCACGCA...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTTGTTCAGGAGGCATTaGGTGCGGGGTTCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVLFRRH*VRGSES
Trigger: GGACTCAGAACCCCGCACCAAATGCCTCCTGAACAA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCGAGTTAGCCAGCCGCTaGAACTCGAGTTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPELASR*NSSSMP
Trigger: TGGCATGGAACTCGAGTTCAAGCGGCTGGCTAACTC...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGTTCACCAGGCGGTTCTaGAACTTGTTACAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGAFTRRF*NLLQGR
Trigger: TCTGCCTTGTAACAAGTTCAAGAACCGCCTGGTGAA...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTTTGGTCACAACCACCTaGGGTTTGCTGCGAGCGCCA +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGLVTTT*GLLRAP
Trigger: TGGCGCTCGCAGCAAACCCAAGGTGGTTGTGACCAA...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCTTCACCTTGAAGTTCTaGGGCGAGACTTGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVFTLKF*GETWSR
Trigger: GCGGGACCAAGTCTCGCCCAAGAACTTCAAGGTGAA...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS TCA 90 bp GCCCTGCAGTTGTGGTGTCCTCCAGAGGGGAACTCTTTAGGCCAGTaGAAGGGCCAGCAGGTTGGTCCAGGGGTCCTCAGTAGAAGTTGT +
Preference number: 5 (lower is better)
Translates to: ALQLWCPPEGNSLGQ*KGQQVGPGVLSRSC
Trigger: ACAACTTCTACTGAGGACCCCTGGACCAACCTGCTGGCCCTTTCACTGGCCTAAAGAGTTCCCCTCTGGAGGACACCACAACTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS GCA 90 bp GAGGCTGTCGTTGGCCTTGAGCCGCTCCGTGTGCTCCGCCATGTCTaGGATGGGAATTGGCGGGTGGCTAAGCATGCTTTCAAAGTGAAA +
Preference number: 5 (lower is better)
Translates to: EAVVGLEPLRVLRHV*DGNWRVAKHAFKVK
Trigger: TTTCACTTTGAAAGCATGCTTAGCCACCCGCCAATTCCCATCGCAGACATGGCGGAGCACACGGAGCGGCTCAAGGCCAACGACAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588552.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTACCACGATCGTCGAATaGTTCTCCCACAGCATGCGC +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGTTIVE*FSHSMR
Trigger: GCGCATGCTGTGGGAGAACAATTCGACGATCGTGGT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGCTGGGGCGAACCATGGCTTTAGGTaGCATAGTGGTCAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: ECAKYLKAAAGAREVAGANHGFR*HSGQSF
Trigger: GAAGCTTTGACCACTATGCAACCTAAAGCCATGGTT...CGCCCCAGCGACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000592099.5
CDS CCA 90 bp AGGACAGTAAGCTTGGCATGGACTGTGATCTCCCCAACCGAGTTCTaGGCCACACACTCGTACACGTTTTCATCCCGCGGTGTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RTVSLAWTVISPTEF*ATHSYTFSSRGVLS
Trigger: GCTGAGGACACCGCGGGATGAAAACGTGTACGAGTGTGTGGCCCAGAACTCGGTTGGGGAGATCACAGTCCATGCCAAGCTTACTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCACGCCGATCTGGTCCTaGGGTTCTTTGATAAACCTG +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPTPIWS*GSLINL
Trigger: CAGGTTTATCAAAGAACCCAAGGACCAGATCGGCGT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp GGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTCGGCCCGTCTTGGCTCTaGGATTTATATTCGATGACG +
Preference number: 5 (lower is better)
Translates to: GKEECAKYLKAAAGAREVGPSWL*DLYSMT
Trigger: CGTCATCGAATATAAATCCAAGAGCCAAGACGGGCC...GACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS-3UTR CAA 90 bp AGGAAAGGAGGAATGTGCCAAGTATTTGAAGGCGGCGGCCGGTGCCAGGGAGGTAAGAGGAGCTCGTACTaGATGATACTCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: RKGGMCQVFEGGGRCQGGKRSSY*MILSCR
Trigger: GCGGCAGGAGAGTATCATCAAGTACGAGCTCCTCTT...ACCTCCCTGGCACCGGCCGCCGCCTTCAAATACTTGGCACATTCCTCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS TCA 90 bp AGGGGCGAGGTCGGCATTGTTCAGGAGGCATTTGGTGCGGGGTTCTaGGTCCTTGCGTTTACTTTAGGAGAAGCAAGCGGAACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: RGEVGIVQEAFGAGF*VLAFTLGEASGTVQ
Trigger: CTGGACTGTTCCGCTTGCTTCTCCTAAAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACAATGCCGACCTCGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS TCA 90 bp AGGGGCGAGGTCGGCATTGTTCAGGAGGCATTTGGTGCGGGGTTCTaGGTCCTTGCGTTTACTGTCGGGTTTGTTCTTGTAGAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: RGEVGIVQEAFGAGF*VLAFTVGFVLVEQD
Trigger: ATCCTGCTCTACAAGAACAAACCCGACAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACAATGCCGACCTCGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS-3UTR CAA 90 bp TGTGCCCCACCCTCCTCTGGTTCTGGGGAGCACTCCTATTTGCTCACCATCCCCAACCATGGCTTTAGGTaGCATAGTGGTCAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: CAPPSSGSGEHSYLLTIPNHGFR*HSGQSF
Trigger: GAAGCTTTGACCACTATGCAACCTAAAGCCATGGTT...GGGGATGGTGAGCAAATAGGAGTGCTCCCCAGAACCAGAGGAGGGTGGGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS TCA 90 bp TTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGCCCTaGGACTGTTACTGGTTGGATAAGGGAGATCAAGGTCCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: FLQRHNKSPPVGAGP*DCYWLDKGDQGPRR
Trigger: CCTCCGAGGACCTTGATCTCCCTTATCCAACCAGTAACAGTCTCAGGGCCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS TCA 90 bp TTGAAGATAGGGGTTAAGAGGAGAAGCCAAGCCACTGGCCTGCTTTaGGCCCTAGCTCTGCCATTCCCATGCTGTGTGACCTTGATCAAG +
Preference number: 5 (lower is better)
Translates to: LKIGVKRRSQATGLL*ALALPFPCCVTLIK
Trigger: CTTGATCAAGGTCACACAGCATGGGAATGGCAGAGCTAGGGCTCAAAGCAGGCCAGTGGCTTGGCTTCTCCTCTTAACCCCTATCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS GCA 90 bp TGGTCTCCTCTGGAAAATGGTGCTCATATTTCCTGTTTGTCCCCCTaGCTATCGACACCACAAGGAGGCTTATCTCAGCCCTGGGATGTG +
Preference number: 5 (lower is better)
Translates to: WSPLENGAHISCLSP*LSTPQGGLSQPWDV
Trigger: CACATCCCAGGGCTGAGATAAGCCTCCTTGTGGTGTCGATAGGCAGGGGGACAAACAGGAAATATGAGCACCATTTTCCAGAGGAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS-3UTR CAA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAAGGTGGGCGCCATGCTaGGCAGCGACCTCCGATCTC +
Preference number: 5 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRRWAPC*AATSDL
Trigger: GAGATCGGAGGTCGCTGCCAAGCATGGCGCCCACCT...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS TCA 90 bp TTCAATCTGCAGGGCTCCTCGAATCGGAGTGCTTTCAAAGGTTTCTaGTCGCAGCTGTTTGATGCGTCCATTGCTGGCACTAGGATCCAC +
Preference number: 5 (lower is better)
Translates to: FNLQGSSNRSAFKGF*SQLFDASIAGTRIH
Trigger: GTGGATCCTAGTGCCAGCAATGGACGCATCAAACAGCTGCGATCAGAAACCTTTGAAAGCACTCCGATTCGAGGAGCCCTGCAGATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS GCA 90 bp GGTCGGCATTGTTCAGGAGGCATTTGGTGCGGGGTTCTGAGTCCTTaGGTTTACTTTAGGAGAAGCAAGCGGAACAGTCCAGTTAGTAGT +
Preference number: 5 (lower is better)
Translates to: GRHCSGGIWCGVLSP*VYFRRSKRNSPVSS
Trigger: ACTACTAACTGGACTGTTCCGCTTGCTTCTCCTAAAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACAATGCCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS-3UTR CAA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGACCTTCTTGCCCTTCTaGTTCCAGGTCACTCGTGGC +
Preference number: 5 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGTFLPF*FQVTRG
Trigger: GCCACGAGTGACCTGGAACAAGAAGGGCAAGAAGGT...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS-3UTR CAA 90 bp CAATTCCTTTCTTTCTTGCAAAGGCACAATAAATCCCCACCAGTAGGCGCTGGGCGGAGGACAGTAAGCTaGGCATGGACTGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: QFLSFLQRHNKSPPVGAGRRTVS*AWTVIS
Trigger: GGAGATCACAGTCCATGCCAAGCTTACTGTCCTCCG...CCCAGCGCCTACTGGTGGGGATTTATTGTGCCTTTGCAAGAAAGAAAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS TCA 90 bp CTTAAAGGTGTCTTGGACCCAAAGAGTGAGGAGCAAGATTTATTGTaGAGAGCAAAAGAACAAAGCTTCCACAGCGTGGAAGGGGACCCG +
Preference number: 5 (lower is better)
Translates to: LKGVLDPKSEEQDLL*RAKEQSFHSVEGDP
Trigger: CGGGTCCCCTTCCACGCTGTGGAAGCTTTGTTCTTTTGCTCTTCACAATAAATCTTGCTCCTCACTCTTTGGGTCCAAGACACCTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS-3UTR CAA 90 bp AATTACCTTTCTCGCTTGAACCCATCTGAGTTGGATCAGCCTTTTGTCATCAGAACGCCGATCTGGTCCTaGGGTTCTTTGATAAACCTG +
Preference number: 5 (lower is better)
Translates to: NYLSRLNPSELDQPFVIRTPIWS*GSLINL
Trigger: CAGGTTTATCAAAGAACCCAAGGACCAGATCGGCGT...TCTGATGACAAAAGGCTGATCCAACTCAGATGGGTTCAAGCGAGAAAGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS GCA 72 bp CGGGCTTGCACGTTCCGCGGCGCGCTGGCCGGGGCCTaGTCGCCTGTGCGGGTGACCACGGACTCGCTGGGG +
Preference number: 6 (lower is better)
Translates to: RACTFRGALAGA*SPVRVTTDSLG
Trigger: CCCCAGCGAGTCCGTGGTCACCCGCACAGGCGAGCAGGCCCCGGCCAGCGCGCCGCGGAACGTGCAAGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 90 bp GGCACGGGTGGCAGCCAGCGGAGAAGGACGGTCCCGGCCGAGGCGTaGCCGGCCGCCTCCAGAATCTGCGGGTGGCCACGGGGCGTGTCC +
Preference number: 6 (lower is better)
Translates to: GTGGSQRRRTVPAEA*PAASRICGWPRGVS
Trigger: GGACACGCCCCGTGGCCACCCGCAGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGACCGTCCTTCTCCGCTGGCTGCCACCCGTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 90 bp CGGGCAGGGCCCAGGGCACCGGCCTCCCGCACGGCCACCGTGTATTaGACGATGGCCCCGTTGCGCTCGGCGGGCACGGGTGGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: RAGPRAPASRTATVY*TMAPLRSAGTGGSQ
Trigger: CTGGCTGCCACCCGTGCCCGCCGAGCGCAACGGGGCCATCGTCAAATACACGGTGGCCGTGCGGGAGGCCGGTGCCCTGGGCCCTGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS TCA 72 bp AGATGGACTGCAGCGTGCGCTGCCGCACCACGGGGGTaGAGGCGCCCAGGCCCTGCGGCGAGCGGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: RWTAACAAAPRG*RRPGPAASGPP
Trigger: TGGCGGCCCGCTCGCCGCAGGGCCTGGGCGCCTTCACCCCCGTGGTGCGGCAGCGCACGCTGCAGTCCATCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp GTTTGGACTGCAGCGTGCGCTGCCGCACCACGGGGGTaGAGGCGCCCAGGCCCTGCGGCGAGCGGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: VWTAACAAAPRG*RRPGPAASGPP
Trigger: TGGCGGCCCGCTCGCCGCAGGGCCTGGGCGCCTTCACCCCCGTGGTGCGGCAGCGCACGCTGCAGTCCAAAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp CCTTCCGCGGCGGCGCGCTGGGCACATCCTCGTCGGTaGGGACGACCACGGGCGAGCTCTCGGGCCCTGGTC +
Preference number: 6 (lower is better)
Translates to: PSAAARWAHPRR*GRPRASSRALV
Trigger: GACCAGGGCCCGAGAGCTCGCCCGTGGTCGTCCGCACCGACGAGGATGTGCCCAGCGCGCCGCCGCGGAAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp CGGTGCCAGCCGGGGGCTCCCAGCGTGCCAGCAGGCTaGCCTCGGGGGTCTGCTGCACCGACAGGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: RCQPGAPSVPAG*PRGSAAPTGLG
Trigger: GCCCAACCCTGTCGGTGCAGCAGACCCCCGAGGGCAGCCTGCTGGCACGCTGGGAGCCCCCGGCTGGCACCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp ACTGCAGGCGGTAGCCCAGCACCTGGTCCTCCGCGGTaGCAGCCGGGGGCTCCCAGCGTGCCAGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: TAGGSPAPGPPR*QPGAPSVPAGC
Trigger: GCAGCCTGCTGGCACGCTGGGAGCCCCCGGCTGGCACCGCGGAGGACCAGGTGCTGGGCTACCGCCTGCAGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp GTCCCGGCCGAGGCGTTGCCGGCCGCCTCCAGAATCTaGGGGTGGCCACGGGGCGTGTCCTCCGGGATGCTC +
Preference number: 6 (lower is better)
Translates to: VPAEALPAASRI*GWPRGVSSGML
Trigger: GAGCATCCCGGAGGACACGCCCCGTGGCCACCCGCAGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp GCAGCCAGCGGAGAAGGACGGTCCCGGCCGAGGCGTTaGCGGCCGCCTCCAGAATCTGCGGGTGGCCACGGG +
Preference number: 6 (lower is better)
Translates to: AASGEGRSRPRR*RPPPESAGGHG
Trigger: CCCGTGGCCACCCGCAGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGACCGTCCTTCTCCGCTGGCTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 72 bp GGCAGCCAGCGGAGAAGGACGGTCCCGGCCGAGGCGTaGCCGGCCGCCTCCAGAATCTGCGGGTGGCCACGG +
Preference number: 6 (lower is better)
Translates to: GSQRRRTVPAEA*PAASRICGWPR
Trigger: CCGTGGCCACCCGCAGATTCTGGAGGCGGCCGGCAACGCCTCGGCCGGGACCGTCCTTCTCCGCTGGCTGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 90 bp CTGGGCTGGGCTCCCCCGGCTCTGCCCCGCTTCACATCGTGGCTGTaGCATGGGATCCGAGCGGAGCCCGAGCGCCAGCGGCTCGCGGCG +
Preference number: 6 (lower is better)
Translates to: LGWAPPALPRFTSWL*HGIRAEPERQRLAA
Trigger: CGCCGCGAGCCGCTGGCGCTCGGGCTCCGCTCGGATCCCATGCAACAGCCACGATGTGAAGCGGGGCAGAGCCGGGGGAGCCCAGCCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS TCA 72 bp CCAGGGCACCGGCCTCCCGCACGGCCACCGTGTATTTaGCGATGGCCCCGTTGCGCTCGGCGGGCACGGGTG +
Preference number: 6 (lower is better)
Translates to: PGHRPPARPPCI*RWPRCARRARV
Trigger: CACCCGTGCCCGCCGAGCGCAACGGGGCCATCGTCAAATACACGGTGGCCGTGCGGGAGGCCGGTGCCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp TCCCAGCGTGCCAGCAGGCTGCCCTCGGGGGTCTGCTaGACCGACAGGGTTGGGCGGCCCAGCACTGCTCCC +
Preference number: 6 (lower is better)
Translates to: SQRASRLPSGVC*TDRVGRPSTAP
Trigger: GGGAGCAGTGCTGGGCCGCCCAACCCTGTCGGTGCAGCAGACCCCCGAGGGCAGCCTGCTGGCACGCTGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp GAATCTGCGGGTGGCCACGGGGCGTGTCCTCCGGGATaGTCAGGACCTCGGCTGCCTCCTCGCCCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: ESAGGHGACPPG*SGPRLPPRPGR
Trigger: GCGGCCTGGGCGAGGAGGCAGCCGAGGTCCTGAGCATCCCGGAGGACACGCCCCGTGGCCACCCGCAGATTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 72 bp GCCGAGGCGTTGCCGGCCGCCTCCAGAATCTGCGGGTaGCCACGGGGCGTGTCCTCCGGGATGCTCAGGACC +
Preference number: 6 (lower is better)
Translates to: AEALPAASRICG*PRGVSSGMLRT
Trigger: GGTCCTGAGCATCCCGGAGGACACGCCCCGTGGCCACCCGCAGATTCTGGAGGCGGCCGGCAACGCCTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 72 bp TTTGACGATGGCCCCGTTGCGCTCGGCGGGCACGGGTaGCAGCCAGCGGAGAAGGACGGTCCCGGCCGAGGC +
Preference number: 6 (lower is better)
Translates to: FDDGPVALGGHG*QPAEKDGPGRG
Trigger: GCCTCGGCCGGGACCGTCCTTCTCCGCTGGCTGCCACCCGTGCCCGCCGAGCGCAACGGGGCCATCGTCAAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 72 bp CCCAGGGCACCGGCCTCCCGCACGGCCACCGTGTATTaGACGATGGCCCCGTTGCGCTCGGCGGGCACGGGT +
Preference number: 6 (lower is better)
Translates to: PRAPASRTATVY*TMAPLRSAGTG
Trigger: ACCCGTGCCCGCCGAGCGCAACGGGGCCATCGTCAAATACACGGTGGCCGTGCGGGAGGCCGGTGCCCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 90 bp GCACCGGCCTCCCGCACGGCCACCGTGTATTTGACGATGGCCCCGTaGCGCTCGGCGGGCACGGGTGGCAGCCAGCGGAGAAGGACGGTC +
Preference number: 6 (lower is better)
Translates to: APASRTATVYLTMAP*RSAGTGGSQRRRTV
Trigger: GACCGTCCTTCTCCGCTGGCTGCCACCCGTGCCCGCCGAGCGCAACGGGGCCATCGTCAAATACACGGTGGCCGTGCGGGAGGCCGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp CTCCCCCGGCTCTGCCCCGCTTCACATCGTGGCTGTTaGATGGGATCCGAGCGGAGCCCGAGCGCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: LPRLCPASHRGC*MGSERSPSASG
Trigger: GCCGCTGGCGCTCGGGCTCCGCTCGGATCCCATGCAACAGCCACGATGTGAAGCGGGGCAGAGCCGGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CCA 72 bp AGCGCGGGGCCACGCGGCGGACTCGCACGTAGAGGTTaGCAGGTGAGGAGTAGCGCACGCCGGCGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: SAGPRGGLARRG*QVRSSARRRCW
Trigger: CCAACAGCGCCGGCGTGCGCTACTCCTCACCTGCCAACCTCTACGTGCGAGTCCGCCGCGTGGCCCCGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp CCCGGCTCTGCCCCGCTTCACATCGTGGCTGTTGCATaGGATCCGAGCGGAGCCCGAGCGCCAGCGGCTCGC +
Preference number: 6 (lower is better)
Translates to: PGSAPLHIVAVA*DPSGARAPAAR
Trigger: GCGAGCCGCTGGCGCTCGGGCTCCGCTCGGATCCCATGCAACAGCCACGATGTGAAGCGGGGCAGAGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CCA 72 bp GGCTGGGCTCCCCCGGCTCTGCCCCGCTTCACATCGTaGCTGTTGCATGGGATCCGAGCGGAGCCCGAGCGC +
Preference number: 6 (lower is better)
Translates to: GWAPPALPRFTS*LLHGIRAEPER
Trigger: GCGCTCGGGCTCCGCTCGGATCCCATGCAACAGCCACGATGTGAAGCGGGGCAGAGCCGGGGGAGCCCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CAA 72 bp GCTCCCCCGGCTCTGCCCCGCTTCACATCGTGGCTGTaGCATGGGATCCGAGCGGAGCCCGAGCGCCAGCGG +
Preference number: 6 (lower is better)
Translates to: APPALPRFTSWL*HGIRAEPERQR
Trigger: CCGCTGGCGCTCGGGCTCCGCTCGGATCCCATGCAACAGCCACGATGTGAAGCGGGGCAGAGCCGGGGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CAA 72 bp GAAGGGGCCAGGGCCCCGGCGCGTGTGGGCTCGCACTaGGAGGTCATAGGCCGTGTCGGGCTTCAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: EGARAPARVGSH*EVIGRVGLQAL
Trigger: CAGGGCCTGAAGCCCGACACGGCCTATGACCTCCAAGTGCGAGCCCACACGCGCCGGGGCCCTGGCCCCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp TGCACAATCATGGTGGTCGCGCTGAGCATCCGGGCTTaGACGTTCCGCGGCGCGCTGGCCGGGGCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: CTIMVVALSIRA*TFRGALAGACS
Trigger: CGAGCAGGCCCCGGCCAGCGCGCCGCGGAACGTGCAAGCCCGGATGCTCAGCGCGACCACCATGATTGTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp CTGCACAATCATGGTGGTCGCGCTGAGCATCCGGGCTaGCACGTTCCGCGGCGCGCTGGCCGGGGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: LHNHGGRAEHPG*HVPRRAGRGLL
Trigger: GAGCAGGCCCCGGCCAGCGCGCCGCGGAACGTGCAAGCCCGGATGCTCAGCGCGACCACCATGATTGTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp CAGACACCATGCCAGGGCCCCAGGTGGGCGCCATGCTaGGCAGCGACCTCCGATCTCCGCCCTGGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: QTPCQGPRWAPC*AATSDLRPGGG
Trigger: TCCCCCTCCAGGGCGGAGATCGGAGGTCGCTGCCAAGCATGGCGCCCACCTGGGGCCCTGGCATGGTGTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586065.1
ENST00000587303.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
CDS CCA 72 bp AGACACCATGCCAGGGCCCCAGGTGGGCGCCATGCTTaGCAGCGACCTCCGATCTCCGCCCTGGAGGGGGAT +
Preference number: 6 (lower is better)
Translates to: RHHARAPGGRHA*QRPPISALEGD
Trigger: ATCCCCCTCCAGGGCGGAGATCGGAGGTCGCTGCCAAGCATGGCGCCCACCTGGGGCCCTGGCATGGTGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586065.1
ENST00000587303.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
CDS CCA 72 bp GTCGGTGCGGACGACCACGGGCGAGCTCTCGGGCCCTaGTCCCACCTCTGTGTGAGCGACAGTCGTGATGCG +
Preference number: 6 (lower is better)
Translates to: VGADDHGRALGP*SHLCVSDSRDA
Trigger: CGCATCACGACTGTCGCTCACACAGAGGTGGGACCAGGGCCCGAGAGCTCGCCCGTGGTCGTCCGCACCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 72 bp CAGGCTGCCCTCGGGGGTCTGCTGCACCGACAGGGTTaGGCGGCCCAGCACTGCTCCCTTGGTCACAACCAC +
Preference number: 6 (lower is better)
Translates to: QAALGGLLHRQG*AAQHCSLGHNH
Trigger: GTGGTTGTGACCAAGGGAGCAGTGCTGGGCCGCCCAACCCTGTCGGTGCAGCAGACCCCCGAGGGCAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 72 bp CCGTGTAGCGGTCCTCGGAGGGCGGGAACTCCAGGGTaGCCAGGGGCGTCGAGTCCTCACGGCCAAACTGCA +
Preference number: 6 (lower is better)
Translates to: PCSGPRRAGTPG*PGASSPHGQTA
Trigger: TGCAGTTTGGCCGTGAGGACTCGACGCCCCTGGCCACCCTGGAGTTCCCGCCCTCCGAGGACCGCTACACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 72 bp GCAGGCTGCCCTCGGGGGTCTGCTGCACCGACAGGGTaGGGCGGCCCAGCACTGCTCCCTTGGTCACAACCA +
Preference number: 6 (lower is better)
Translates to: AGCPRGSAAPTG*GGPALLPWSQP
Trigger: TGGTTGTGACCAAGGGAGCAGTGCTGGGCCGCCCAACCCTGTCGGTGCAGCAGACCCCCGAGGGCAGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 90 bp TCAGCATCAGGCTTGGGGGCGACGCTGGGCTTGCCGTTGAGCAGGTaGAAGGCAGTCCAGGCGGTGACCGTCTGCTGGAGGCCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SASGLGATLGLPLSR*KAVQAVTVCWRPPR
Trigger: CCTGGGCGGCCTCCAGCAGACGGTCACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCCCAAGCCTGATGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp GGGGATGCCGTTCACCTCCTTGGGTTCCGGGTCCTCTaGGCCCAGCGGTCGGTAGCGGACGCTGTAGCCCAC +
Preference number: 6 (lower is better)
Translates to: GDAVHLLGFRVL*AQRSVADAVAH
Trigger: GTGGGCTACAGCGTCCGCTACCGACCGCTGGGCTCAGAGGACCCGGAACCCAAGGAGGTGAACGGCATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp TTGAAGTTCTTGGGCGAGATGGACTGCAGCGTGCGCTaGCGCACCACGGGGGTGAAGGCGCCCAGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LKFLGEMDCSVR*RTTGVKAPRPC
Trigger: GCAGGGCCTGGGCGCCTTCACCCCCGTGGTGCGGCAGCGCACGCTGCAGTCCATCTCGCCCAAGAACTTCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588552.5
ENST00000592099.5
CDS GCA 72 bp CCGGGCTCCAGGCCCCGGTTATCGAAGCCGCCATACTaGTTCTGGTCGCCGGGATGGAACGTGGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: PGSRPRLSKPPY*FWSPGWNVGGS
Trigger: GCTGCCACCCACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGGCTTCGATAACCGGGGCCTGGAGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp AGCAGGTTGAAGGCAGTCCAGGCGGTGACCGTCTGCTaGAGGCCGCCCAGGCTGCTGCCGCGATTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SRLKAVQAVTVC*RPPRLLPRLVS
Trigger: GCTGACCAATCGCGGCAGCAGCCTGGGCGGCCTCCAGCAGACGGTCACCGCCTGGACTGCCTTCAACCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp GGCTTGGGGGCGACGCTGGGCTTGCCGTTGAGCAGGTaGAAGGCAGTCCAGGCGGTGACCGTCTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GLGATLGLPLSR*KAVQAVTVCWR
Trigger: CCTCCAGCAGACGGTCACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCCCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS GCA 72 bp CTGCCCACGGTGGTCAGCAGGCTGTCGTCCACGTTGTaGTTCTGCCAGTTGCCCACGGGGTGCTCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: LPTVVSRLSSTL*FCQLPTGCSGS
Trigger: GGAACCGGAGCACCCCGTGGGCAACTGGCAGAAGCACAACGTGGACGACAGCCTGCTGACCACCGTGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp CGCGGCGGACTTCTCGAAGCTCTCGCACGTAGAGGTTaGCAGGTGAGGAGTAGCGCACGCCGGCGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: RGGLLEALARRG*QVRSSARRRCW
Trigger: CCAACAGCGCCGGCGTGCGCTACTCCTCACCTGCCAACCTCTACGTGCGAGAGCTTCGAGAAGTCCGCCGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS TCA 72 bp ACGGGCGAGCTCTCGGGCCCTGGTCCCACCTCTGTGTaGGCGACAGTCGTGATGCGGTACTGGGTCCACTTC +
Preference number: 6 (lower is better)
Translates to: TGELSGPGPTSV*ATVVMRYWVHF
Trigger: GAAGTGGACCCAGTACCGCATCACGACTGTCGCTCACACAGAGGTGGGACCAGGGCCCGAGAGCTCGCCCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 72 bp CACAGCCTCCAACGAGCAGGACCACAAGGAGGCCCATaGGACCAACCACAGACACCATGCCAGGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: HSLQRAGPQGGP*DQPQTPCQGPR
Trigger: CCTGGGGCCCTGGCATGGTGTCTGTGGTTGGTCCCATGGGCCTCCTTGTGGTCCTGCTCGTTGGAGGCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262963.10
ENST00000586065.1
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
ENST00000592099.5
CDS CCA 72 bp GGTCTTGACTCTCCGCAGGAAAGCCAGGAAGGGCGTTaGGTATTCGGGCACGCCATGGTCCGGCCACGCCGT +
Preference number: 6 (lower is better)
Translates to: GLDSPQESQEGR*VFGHAMVRPRR
Trigger: ACGGCGTGGCCGGACCATGGCGTGCCCGAATACCCAACGCCCTTCCTGGCTTTCCTGCGGAGAGTCAAGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp TCAGCATCAGGCTTGGGGGCGACGCTGGGCTTGCCGTaGAGCAGGTTGAAGGCAGTCCAGGCGGTGACCGTC +
Preference number: 6 (lower is better)
Translates to: SASGLGATLGLP*SRLKAVQAVTV
Trigger: GACGGTCACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCCCAAGCCTGATGCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp AAGCCGTCAGCATCAGGCTTGGGGGCGACGCTGGGCTaGCCGTTGAGCAGGTTGAAGGCAGTCCAGGCGGTG +
Preference number: 6 (lower is better)
Translates to: KPSASGLGATLG*PLSRLKAVQAV
Trigger: CACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCCCAAGCCTGATGCTGACGGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp ACCACGATGGGGCCGGCATCTGGCGGGTTGCAGGTCTaGACTCTCCGCAGGAAAGCCAGGAAGGGCGTTGGG +
Preference number: 6 (lower is better)
Translates to: TTMGPASGGLQV*TLRRKARKGVG
Trigger: CCCAACGCCCTTCCTGGCTTTCCTGCGGAGAGTCAAGACCTGCAACCCGCCAGATGCCGGCCCCATCGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp GGGCGGCCCAGCACTGCTCCCTTGGTCACAACCACCTaGGGTTTGCTGCGAGCGCCATCGCCCTTCATGGTG +
Preference number: 6 (lower is better)
Translates to: GRPSTAPLVTTT*GLLRAPSPFMV
Trigger: CACCATGAAGGGCGATGGCGCTCGCAGCAAACCCAAGGTGGTTGTGACCAAGGGAGCAGTGCTGGGCCGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 90 bp ATGAAGCCGTCAGCATCAGGCTTGGGGGCGACGCTGGGCTTGCCGTaGAGCAGGTTGAAGGCAGTCCAGGCGGTGACCGTCTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: MKPSASGLGATLGLP*SRLKAVQAVTVCWR
Trigger: CCTCCAGCAGACGGTCACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCCCAAGCCTGATGCTGACGGCTTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp CGGGCCCTGGTCCCACCTCTGTGTGAGCGACAGTCGTaGTGCGGTACTGGGTCCACTTCTCCAAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: RALVPPLCERQS*CGTGSTSPRPP
Trigger: TGGAGGCCTTGGAGAAGTGGACCCAGTACCGCATCACGACTGTCGCTCACACAGAGGTGGGACCAGGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS GCA 72 bp ACGGTGGTCAGCAGGCTGTCGTCCACGTTGTGCTTCTaGCAGTTGCCCACGGGGTGCTCCGGTTCCATGGTG +
Preference number: 6 (lower is better)
Translates to: TVVSRLSSTLCF*QLPTGCSGSMV
Trigger: CACCATGGAACCGGAGCACCCCGTGGGCAACTGGCAGAAGCACAACGTGGACGACAGCCTGCTGACCACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS GCA 72 bp GGGATGGAACGTGGGTGGCAGCACAGAGAAGCGAGCTaGAATATAGGGCCGGGGCACCTCCAGCTGACGCGA +
Preference number: 6 (lower is better)
Translates to: GMERGWQHREAS*NIGPGHLQLTR
Trigger: TCGCGTCAGCTGGAGGTGCCCCGGCCCTATATTGCAGCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS GCA 72 bp GTTGGCCTTGAGCCGCTCCGTGTGCTCCGCCATGTCTaGGATGGGAATTGGCGGGTGGCTAAGCATGCCTGG +
Preference number: 6 (lower is better)
Translates to: VGLEPLRVLRHV*DGNWRVAKHAW
Trigger: CCAGGCATGCTTAGCCACCCGCCAATTCCCATCGCAGACATGGCGGAGCACACGGAGCGGCTCAAGGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000589851.1
ENST00000592099.5
CDS CCA 72 bp TCCAGGCCCCGGTTATCGAAGCCGCCATACTGCTTCTaGTCGCCGGGATGGAACGTGGGTGGCAGCACAGAG +
Preference number: 6 (lower is better)
Translates to: SRPRLSKPPYCF*SPGWNVGGSTE
Trigger: CTCTGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGGCTTCGATAACCGGGGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp GGCGGCCCAGCACTGCTCCCTTGGTCACAACCACCTTaGGTTTGCTGCGAGCGCCATCGCCCTTCATGGTGT +
Preference number: 6 (lower is better)
Translates to: GGPALLPWSQPP*VCCERHRPSWC
Trigger: ACACCATGAAGGGCGATGGCGCTCGCAGCAAACCCAAGGTGGTTGTGACCAAGGGAGCAGTGCTGGGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 90 bp ACCATGATGAAGCCGTCAGCATCAGGCTTGGGGGCGACGCTGGGCTaGCCGTTGAGCAGGTTGAAGGCAGTCCAGGCGGTGACCGTCTGC +
Preference number: 6 (lower is better)
Translates to: TMMKPSASGLGATLG*PLSRLKAVQAVTVC
Trigger: GCAGACGGTCACCGCCTGGACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCCCAAGCCTGATGCTGACGGCTTCATCATGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp GGGCTGGGGGTCCGGGTTATCCAGCTGGAAGGGGTCTaGGAAGGGACTGGCTGCAAAGGTAGGCTCGCTCTT +
Preference number: 6 (lower is better)
Translates to: GLGVRVIQLEGV*EGTGCKGRLAL
Trigger: AAGAGCGAGCCTACCTTTGCAGCCAGTCCCTTCTCAGACCCCTTCCAGCTGGATAACCCGGACCCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000589851.1
ENST00000592099.5
CDS GCA 72 bp CCAGCACTGCTCCCTTGGTCACAACCACCTTGGGTTTaGTGCGAGCGCCATCGCCCTTCATGGTGTAGGCGG +
Preference number: 6 (lower is better)
Translates to: PALLPWSQPPWV*CERHRPSWCRR
Trigger: CCGCCTACACCATGAAGGGCGATGGCGCTCGCAGCAAACCCAAGGTGGTTGTGACCAAGGGAGCAGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CCA 72 bp ACAAGCTGTGGGGGCAGCCGGGCATCCCCTCTCCTGTaGGCACACTATCAGCCCATTCCCTGTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: TSCGGSRASPLL*AHYQPIPCPLP
Trigger: AGGAAGAGGACAGGGAATGGGCTGATAGTGTGCCCACAGGAGAGGGGATGCCCGGCTGCCCCCACAGCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CAA 90 bp CTCTCCTGTGGGCACACTATCAGCCCATTCCCTGTCCTCTTCCTCTaGCCTGAAGCCTCCACGGGGGAGGGCTGGTTCTTACCTGTCGGG +
Preference number: 6 (lower is better)
Translates to: LSCGHTISPFPVLFL*PEASTGEGWFLPVG
Trigger: CCCGACAGGTAAGAACCAGCCCTCCCCCGTGGAGGCTTCAGGCAAGAGGAAGAGGACAGGGAATGGGCTGATAGTGTGCCCACAGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS GCA 72 bp GTTGGCCTTGAGCCGCTCCGTGTGCTCCGCCATGTCTaGGATGGGAATTGGCGGGTGGCTAAGCATGCTTTC +
Preference number: 6 (lower is better)
Translates to: VGLEPLRVLRHV*DGNWRVAKHAF
Trigger: GAAAGCATGCTTAGCCACCCGCCAATTCCCATCGCAGACATGGCGGAGCACACGGAGCGGCTCAAGGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588552.5
CDS CCA 72 bp GCCATACTGCTTCTGGTCGCCGGGATGGAACGTGGGTaGCAGCACAGAGAAGCGAGCTGCAATATAGGGCCG +
Preference number: 6 (lower is better)
Translates to: AILLLVAGMERG*QHREASCNIGP
Trigger: CGGCCCTATATTGCAGCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAAGCAGTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp CCATCCACGATGGGCTGGGGGTCCGGGTTATCCAGCTaGAAGGGGTCTGAGAAGGGACTGGCTGCAAAGGTA +
Preference number: 6 (lower is better)
Translates to: PSTMGWGSGLSS*KGSEKGLAAKV
Trigger: TACCTTTGCAGCCAGTCCCTTCTCAGACCCCTTCCAGCTGGATAACCCGGACCCCCAGCCCATCGTGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000589851.1
ENST00000592099.5
CDS CCA 72 bp CCGCTCCGTGTGCTCCGCCATGTCTGCGATGGGAATTaGCGGGTGGCTAAGCATGCCTGGAGTCTGGAAGTT +
Preference number: 6 (lower is better)
Translates to: PLRVLRHVCDGN*RVAKHAWSLEV
Trigger: AACTTCCAGACTCCAGGCATGCTTAGCCACCCGCCAATTCCCATCGCAGACATGGCGGAGCACACGGAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262963.10
ENST00000588012.5
ENST00000589851.1
ENST00000592099.5
CDS CCA 72 bp GCCGAGCGTCAGATGGGGCAACGTCTGCAGAGACAATaGAGGGCTGTGAGAGGCGAGTGGGGAAATCCAGGA +
Preference number: 6 (lower is better)
Translates to: AERQMGQRLQRQ*RAVRGEWGNPG
Trigger: TCCTGGATTTCCCCACTCGCCTCTCACAGCCCTCCATTGTCTCTGCAGACGTTGCCCCATCTGACGCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS CAA 72 bp ATCCATGTCCTCTGGGCTACCCAGCGGGGTCAGGAATaGGCCTCCACGAGACTTGCGCAGTGGCACCATCAC +
Preference number: 6 (lower is better)
Translates to: IHVLWATQRGQE*ASTRLAQWHHH
Trigger: GTGATGGTGCCACTGCGCAAGTCTCGTGGAGGCCAATTCCTGACCCCGCTGGGTAGCCCAGAGGACATGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp CCTCCACGGGGGAGGGCTGGTTCTTACCTGTCGGGTTaGCTGTTCCCGAAAGCAGACACAGGTGAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: PPRGRAGSYLSG*LFPKADTGEKG
Trigger: CCCCTTCTCACCTGTGTCTGCTTTCGGGAACAGCAAACCCGACAGGTAAGAACCAGCCCTCCCCCGTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CAA 90 bp TGGCCGTCAGGAAGATACACCATGATGAAGCCGTCAGCATCAGGCTaGGGGGCGACGCTGGGCTTGCCGTTGAGCAGGTTGAAGGCAGTC +
Preference number: 6 (lower is better)
Translates to: WPSGRYTMMKPSASG*GATLGLPLSRLKAV
Trigger: GACTGCCTTCAACCTGCTCAACGGCAAGCCCAGCGTCGCCCCCAAGCCTGATGCTGACGGCTTCATCATGGTGTATCTTCCTGACGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp GTCCCGGGAGCTTTGGGGAGAGATTTCACCGTGATCTaGGCAACCGCCTCAATGACGCCCAGGCTGGACATG +
Preference number: 6 (lower is better)
Translates to: VPGALGRDFTVI*ATASMTPRLDM
Trigger: CATGTCCAGCCTGGGCGTCATTGAGGCGGTTGCTCAGATCACGGTGAAATCTCTCCCCAAAGCTCCCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp ATGGCCGGCCGCTGGGTTCGTAGCATCTTCACCGTCTaGAAGATGTCCACCACGCCTTCATACCGCATCCGC +
Preference number: 6 (lower is better)
Translates to: MAGRWVRSIFTV*KMSTTPSYRIR
Trigger: GCGGATGCGGTATGAAGGCGTGGTGGACATCTTTCAGACGGTGAAGATGCTACGAACCCAGCGGCCGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS GCA 72 bp TCAGCAGGCTGTCGTCCACGTTGTGCTTCTGCCAGTTaGCCACGGGGTGCTCCGGTTCCATGGTGTAGTAGA +
Preference number: 6 (lower is better)
Translates to: SAGCRPRCASAS*PRGAPVPWCSR
Trigger: TCTACTACACCATGGAACCGGAGCACCCCGTGGGCAACTGGCAGAAGCACAACGTGGACGACAGCCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS GCA 72 bp GGCACACTATCAGCCCATTCCCTGTCCTCTTCCTCTTaGCTGAAGCCTCCACGGGGGAGGGCTGGTTCTTAC +
Preference number: 6 (lower is better)
Translates to: GTLSAHSLSSSS*LKPPRGRAGSY
Trigger: GTAAGAACCAGCCCTCCCCCGTGGAGGCTTCAGGCAAGAGGAAGAGGACAGGGAATGGGCTGATAGTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CCA 72 bp CCTTCTTGCCCTTCTTGTTCCAGGTCACTCGTGGCTTaGGGTCACCCGTGGCCTGACACACGAAAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: PSCPSCSRSLVA*GHPWPDTRKRP
Trigger: TGGCCTCTTTCGTGTGTCAGGCCACGGGTGACCCCAAGCCACGAGTGACCTGGAACAAGAAGGGCAAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262963.10
ENST00000586065.1
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
ENST00000592099.5
CDS CCA 72 bp GATGTCCTGGATGAGCTCTTCCAGATCCATGTCCTCTaGGCTACCCAGCGGGGTCAGGAATTGGCCTCCACG +
Preference number: 6 (lower is better)
Translates to: DVLDELFQIHVL*ATQRGQELAST
Trigger: CGTGGAGGCCAATTCCTGACCCCGCTGGGTAGCCCAGAGGACATGGATCTGGAAGAGCTCATCCAGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp AGCCGCCATACTGCTTCTGGTCGCCGGGATGGAACGTaGGTGGCAGCACAGAGAAGCGAGCTGCAATATAGG +
Preference number: 6 (lower is better)
Translates to: SRHTASGRRDGT*VAAQRSELQYR
Trigger: CCTATATTGCAGCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp TTATCGAAGCCGCCATACTGCTTCTGGTCGCCGGGATaGAACGTGGGTGGCAGCACAGAGAAGCGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: LSKPPYCFWSPG*NVGGSTEKRAA
Trigger: TGCAGCTCGCTTCTCTGTGCTGCCACCCACGTTCCATCCCGGCGACCAGAAGCAGTATGGCGGCTTCGATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp CTCTTCCTCTTGCCTGAAGCCTCCACGGGGGAGGGCTaGTTCTTACCTGTCGGGTTTGCTGTTCCCGAAAGC +
Preference number: 6 (lower is better)
Translates to: LFLLPEASTGEG*FLPVGFAVPES
Trigger: GCTTTCGGGAACAGCAAACCCGACAGGTAAGAACCAGCCCTCCCCCGTGGAGGCTTCAGGCAAGAGGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CCA 72 bp GGTGAGGGGCGAGGTCGGCATTGTTCAGGAGGCATTTaGTGCGGGGTTCTGAGTCCTTGCGTTTACTGTCGG +
Preference number: 6 (lower is better)
Translates to: GEGRGRHCSGGI*CGVLSPCVYCR
Trigger: CCGACAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACAATGCCGACCTCGCCCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp GGAAGATACACCATGATGAAGCCGTCAGCATCAGGCTaGGGGGCGACGCTGGGCTTGCCGTTGAGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: GRYTMMKPSASG*GATLGLPLSRL
Trigger: CAACCTGCTCAACGGCAAGCCCAGCGTCGCCCCCAAGCCTGATGCTGACGGCTTCATCATGGTGTATCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp GGGCACACTATCAGCCCATTCCCTGTCCTCTTCCTCTaGCCTGAAGCCTCCACGGGGGAGGGCTGGTTCTTA +
Preference number: 6 (lower is better)
Translates to: GHTISPFPVLFL*PEASTGEGWFL
Trigger: TAAGAACCAGCCCTCCCCCGTGGAGGCTTCAGGCAAGAGGAAGAGGACAGGGAATGGGCTGATAGTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS TCA 72 bp GGGGTTAAGAGGAGAAGCCAAGCCACTGGCCTGCTTTaGGCCCTAGCTCTGCCATTCCCATGCTGTGTGACC +
Preference number: 6 (lower is better)
Translates to: GVKRRSQATGLL*ALALPFPCCVT
Trigger: GGTCACACAGCATGGGAATGGCAGAGCTAGGGCTCAAAGCAGGCCAGTGGCTTGGCTTCTCCTCTTAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS GCA 72 bp GAGGGGCGAGGTCGGCATTGTTCAGGAGGCATTTGGTaGGGGGTTCTGAGTCCTTGCGTTTACTGTCGGGTT +
Preference number: 6 (lower is better)
Translates to: EGRGRHCSGGIW*GVLSPCVYCRV
Trigger: AACCCGACAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACAATGCCGACCTCGCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS GCA 72 bp GTTGGGAATTGGGCGATGACCGCTCTAGCTACTTCCTaGTGGATAGGGGCGAAGAAGGGGCCCTGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: VGNWAMTALATS*WIGAKKGPCSC
Trigger: ACAACTGCAGGGCCCCTTCTTCGCCCCTATCCAGCAGGAAGTAGCTAGAGCGGTCATCGCCCAATTCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CCA 72 bp TCGTACACGTTTTCATCCCGCGGTGTCCTCAGCGGCTaGATCCTCAGCACTGCCCCTGCACTCTCATCAAAC +
Preference number: 6 (lower is better)
Translates to: SYTFSSRGVLSG*ILSTAPALSSN
Trigger: GTTTGATGAGAGTGCAGGGGCAGTGCTGAGGATCCAGCCGCTGAGGACACCGCGGGATGAAAACGTGTACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000592099.5
CDS CCA 72 bp GGTGAGGGGCGAGGTCGGCATTGTTCAGGAGGCATTTaGTGCGGGGTTCTGAGTCCTTGCGTTTACTATGGG +
Preference number: 6 (lower is better)
Translates to: GEGRGRHCSGGI*CGVLSPCVYYG
Trigger: CCCATAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACAATGCCGACCTCGCCCCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262963.10
CDS CCA 72 bp CCGCTCCGTGTGCTCCGCCATGTCTGCGATGGGAATTaGCGGGTGGCTAAGCATGCTTTCAAAGTGAAACCC +
Preference number: 6 (lower is better)
Translates to: PLRVLRHVCDGN*RVAKHAFKVKP
Trigger: GGGTTTCACTTTGAAAGCATGCTTAGCCACCCGCCAATTCCCATCGCAGACATGGCGGAGCACACGGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588552.5
CDS CCA 72 bp GTTGACCTTCTTGCCCTTCTTGTTCCAGGTCACTCGTaGCTTGGGGTCACCCGTGGCCTGACACACGAAAGA +
Preference number: 6 (lower is better)
Translates to: VDLLALLVPGHS*LGVTRGLTHER
Trigger: TCTTTCGTGTGTCAGGCCACGGGTGACCCCAAGCCACGAGTGACCTGGAACAAGAAGGGCAAGAAGGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262963.10
ENST00000586065.1
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
ENST00000592099.5
CDS CCA 72 bp AGCTTGGCATGGACTGTGATCTCCCCAACCGAGTTCTaGGCCACACACTCGTACACGTTTTCATCCCGCGGT +
Preference number: 6 (lower is better)
Translates to: SLAWTVISPTEF*ATHSYTFSSRG
Trigger: ACCGCGGGATGAAAACGTGTACGAGTGTGTGGCCCAGAACTCGGTTGGGGAGATCACAGTCCATGCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000592099.5
CDS CCA 72 bp CGGGGTCAGGAATTGGCCTCCACGAGACTTGCGCAGTaGCACCATCACAATGAAATAGCTCTGGACAGGCAC +
Preference number: 6 (lower is better)
Translates to: RGQELASTRLAQ*HHHNEIALDRH
Trigger: GTGCCTGTCCAGAGCTATTTCATTGTGATGGTGCCACTGCGCAAGTCTCGTGGAGGCCAATTCCTGACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CCA 72 bp GGTGAGGGGCGAGGTCGGCATTGTTCAGGAGGCATTTaGTGCGGGGTTCTGAGTCCTTGCGTTTACTTTAGG +
Preference number: 6 (lower is better)
Translates to: GEGRGRHCSGGI*CGVLSPCVYFR
Trigger: CCTAAAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACAATGCCGACCTCGCCCCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CAA 90 bp CTCTTCCAGATCCATGTCCTCTGGGCTACCCAGCGGGGTCAGGAATaGGCCTCCACGAGACTTGCGCAGTGGCACCATCACAATGAAATA +
Preference number: 6 (lower is better)
Translates to: LFQIHVLWATQRGQE*ASTRLAQWHHHNEI
Trigger: TATTTCATTGTGATGGTGCCACTGCGCAAGTCTCGTGGAGGCCAATTCCTGACCCCGCTGGGTAGCCCAGAGGACATGGATCTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp TTAATGCGTCTCATTTCCACAGGGTCCTTGGGGTGGTaGGGGGCGAGGTCGGCATTGTTCAGGAGGCATTTG +
Preference number: 6 (lower is better)
Translates to: LMRLISTGSLGW*GARSALFRRHL
Trigger: CAAATGCCTCCTGAACAATGCCGACCTCGCCCCTCACCACCCCAAGGACCCTGTGGAAATGAGACGCATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000589851.1
ENST00000592099.5
CDS GCA 72 bp GAGGGGCGAGGTCGGCATTGTTCAGGAGGCATTTGGTaGGGGGTTCTGAGTCCTTGCGTTTACTTTAGGAGA +
Preference number: 6 (lower is better)
Translates to: EGRGRHCSGGIW*GVLSPCVYFRR
Trigger: TCTCCTAAAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACAATGCCGACCTCGCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CCA 72 bp TGCCTATCGACACCACAAGGAGGCTTATCTCAGCCCTaGGATGTGCCCCATGGGGCCACTACAATTGCTATC +
Preference number: 6 (lower is better)
Translates to: CLSTPQGGLSQP*DVPHGATTIAI
Trigger: GATAGCAATTGTAGTGGCCCCATGGGGCACATCCCAGGGCTGAGATAAGCCTCCTTGTGGTGTCGATAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CCA 72 bp TATTGTGAAGAGCAAAAGAACAAAGCTTCCACAGCGTaGAAGGGGACCCGAGTGGGTTGCCGCTGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: YCEEQKNKASTA*KGTRVGCRCCL
Trigger: CAGGCAGCAGCGGCAACCCACTCGGGTCCCCTTCCACGCTGTGGAAGCTTTGTTCTTTTGCTCTTCACAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CCA 72 bp AGCCCTCCCTGCTGTCAAGTCAAGTCGGGGAGGACATaGGGCTTACTTCTTGTAGAGCAGGATAGCAATGAC +
Preference number: 6 (lower is better)
Translates to: SPPCCQVKSGRT*GLLLVEQDSND
Trigger: GTCATTGCTATCCTGCTCTACAAGAAGTAAGCCCCATGTCCTCCCCGACTTGACTTGACAGCAGGGAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CAA 72 bp GATAAGGGAGATCAAGGTCCTCGGAGGACAGTAAGCTaGGCATGGACTGTGATCTCCCCAACCGAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: DKGDQGPRRTVS*AWTVISPTEFW
Trigger: CCAGAACTCGGTTGGGGAGATCACAGTCCATGCCAAGCTTACTGTCCTCCGAGGACCTTGATCTCCCTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590509.5
CDS TCA 72 bp TGTGAGCCCATTGTACTGGATCTTGTAGGGTGTGGGTaGGTTGTAGTTGTCAGGGAACTCCCAGCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: CEPIVLDLVGCG*VVVVRELPAEQ
Trigger: CTGCTCAGCTGGGAGTTCCCTGACAACTACAACTCACCCACACCCTACAAGATCCAGTACAATGGGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp CAGGGCTCCTCGAATCGGAGTGCTTTCAAAGGTTTCTaGTCGCAGCTGTTTGATGCGTCCATTGCTGGCACT +
Preference number: 6 (lower is better)
Translates to: QGSSNRSAFKGF*SQLFDASIAGT
Trigger: AGTGCCAGCAATGGACGCATCAAACAGCTGCGATCAGAAACCTTTGAAAGCACTCCGATTCGAGGAGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS CCA 72 bp CCCATGGGGCCACTACAATTGCTATCCTCATTGAACTaGACACAGGCAGCCTCTACCCCAAATCTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PMGPLQLLSSLN*TQAASTPNLAE
Trigger: CTCAGCAAGATTTGGGGTAGAGGCTGCCTGTGTCCAGTTCAATGAGGATAGCAATTGTAGTGGCCCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CCA 72 bp CCATCTAAACAGGACACCCCAACTGCTGTTGGGAATTaGGCGATGACCGCTCTAGCTACTTCCTGCTGGATA +
Preference number: 6 (lower is better)
Translates to: PSKQDTPTAVGN*AMTALATSCWI
Trigger: TATCCAGCAGGAAGTAGCTAGAGCGGTCATCGCCCAATTCCCAACAGCAGTTGGGGTGTCCTGTTTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CAA 90 bp TCATTGAACTGGACACAGGCAGCCTCTACCCCAAATCTTGCTGAGTaGAAGATAGGGGTTAAGAGGAGAAGCCAAGCCACTGGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: SLNWTQAASTPNLAE*KIGVKRRSQATGLL
Trigger: AAGCAGGCCAGTGGCTTGGCTTCTCCTCTTAACCCCTATCTTCAACTCAGCAAGATTTGGGGTAGAGGCTGCCTGTGTCCAGTTCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS CAA 90 bp TGTGAGCTTTGGTCTCCTCTGGAAAATGGTGCTCATATTTCCTGTTaGTCCCCCTGCCTATCGACACCACAAGGAGGCTTATCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: CELWSPLENGAHISC*SPCLSTPQGGLSQP
Trigger: GGGCTGAGATAAGCCTCCTTGTGGTGTCGATAGGCAGGGGGACAAACAGGAAATATGAGCACCATTTTCCAGAGGAGACCAAAGCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS TCA 72 bp TCTCACTGGAGCCATTCTTGTGCAGAGAGAATGTCCTaGCGCAGAATGTGGCCAGCTCGATGGTATCTAGCA +
Preference number: 6 (lower is better)
Translates to: SHWSHSCAERMS*RRMWPARWYLA
Trigger: TGCTAGATACCATCGAGCTGGCCACATTCTGCGTCAGGACATTCTCTCTGCACAAGAATGGCTCCAGTGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS GCA 72 bp CTGGAAAATGGTGCTCATATTTCCTGTTTGTCCCCCTaGCTATCGACACCACAAGGAGGCTTATCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: LENGAHISCLSP*LSTPQGGLSQP
Trigger: GGGCTGAGATAAGCCTCCTTGTGGTGTCGATAGGCAGGGGGACAAACAGGAAATATGAGCACCATTTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS GCA 72 bp TGTTCAGGAGGCATTTGGTGCGGGGTTCTGAGTCCTTaGGTTTACTGTCGGGTTTGTTCTTGTAGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: CSGGIWCGVLSP*VYCRVCSCRAG
Trigger: TCCTGCTCTACAAGAACAAACCCGACAGTAAACGCAAGGACTCAGAACCCCGCACCAAATGCCTCCTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp ATCGGAGTGCTTTCAAAGGTTTCTGATCGCAGCTGTTaGATGCGTCCATTGCTGGCACTAGGATCCACAGGC +
Preference number: 6 (lower is better)
Translates to: IGVLSKVSDRSC*MRPLLALGSTG
Trigger: GCCTGTGGATCCTAGTGCCAGCAATGGACGCATCAAACAGCTGCGATCAGAAACCTTTGAAAGCACTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587303.5
CDS TCA 72 bp GATACGGCCCGTCTTGGCTCTTGGATTTATATTCGATaGCGTAATAGGACACAGGATCTGGGTTGCCCGAGT +
Preference number: 6 (lower is better)
Translates to: DTARLGSWIYIR*RNRTQDLGCPS
Trigger: ACTCGGGCAACCCAGATCCTGTGTCCTATTACGTCATCGAATATAAATCCAAGAGCCAAGACGGGCCGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp CTGAGCAGAACTGATGTCTTCATGATCATTTTCACCTaGAAGTTCTTGGGCGAGATGGACTGCAGCGTGCGC +
Preference number: 6 (lower is better)
Translates to: LSRTDVFMIIFT*KFLGEMDCSVR
Trigger: GCGCACGCTGCAGTCCATCTCGCCCAAGAACTTCAAGGTGAAAATGATCATGAAGACATCAGTTCTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262963.10
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp TGGTCTCCTCTGGAAAATGGTGCTCATATTTCCTGTTaGTCCCCCTGCCTATCGACACCACAAGGAGGCTTA +
Preference number: 6 (lower is better)
Translates to: WSPLENGAHISC*SPCLSTPQGGL
Trigger: TAAGCCTCCTTGTGGTGTCGATAGGCAGGGGGACAAACAGGAAATATGAGCACCATTTTCCAGAGGAGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS TCA 72 bp TCTCATCAAACTCAATCGTCTCAAAGCGCTGAGAGTTaGCCTTCTTGCCCTTCTTGTTCCAGGTCACTCGTG +
Preference number: 6 (lower is better)
Translates to: SHQTQSSQSAES*PSCPSCSRSLV
Trigger: CACGAGTGACCTGGAACAAGAAGGGCAAGAAGGTCAACTCTCAGCGCTTTGAGACGATTGAGTTTGATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000590509.5
ENST00000591760.5
ENST00000592099.5
CDS TCA 72 bp CCATGTGTACAACAGAGACCTTTAGTGATGATTCTCTaGGACAACTCCTCCCTCCTTTTCCAGGAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: PCVQQRPLVMIL*DNSSLLFQEAL
Trigger: GAGGGCTTCCTGGAAAAGGAGGGAGGAGTTGTCTCAGAGAATCATCACTAAAGGTCTCTGTTGTACACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589851.1
CDS TCA 72 bp TCATTTGGGGTTCCATTTGTAAGATCATCTGTAGCTTaGTGGCCTCAATCCTGTAGTCCCAGCCACTCGGGA +
Preference number: 6 (lower is better)
Translates to: SFGVPFVRSSVA*WPQSCSPSHSG
Trigger: TCCCGAGTGGCTGGGACTACAGGATTGAGGCCATCAAGCTACAGATGATCTTACAAATGGAACCCCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588552.5
CDS CAA 72 bp CTGAGCAGAACTGATGTCTTCATGATCATTTTCACCTaGAAGTTCTTGGGCGAGACTTGGTCCCGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: LSRTDVFMIIFT*KFLGETWSRRN
Trigger: GTTCCTGCGGGACCAAGTCTCGCCCAAGAACTTCAAGGTGAAAATGATCATGAAGACATCAGTTCTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587303.5
ENST00000588012.5
CDS CAA 90 bp GTAACGTGTGGTGGTGATGTCCTCTTTAATCTGATACGGCCCGTCTaGGCTCTTGGATTTATATTCGATGACGTAATAGGACACAGGATC +
Preference number: 6 (lower is better)
Translates to: VTCGGDVLFNLIRPV*ALGFIFDDVIGHRI
Trigger: GATCCTGTGTCCTATTACGTCATCGAATATAAATCCAAGAGCCAAGACGGGCCGTATCAGATTAAAGAGGACATCACCACCACACGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS CAA 72 bp GGTGGTGATGTCCTCTTTAATCTGATACGGCCCGTCTaGGCTCTTGGATTTATATTCGATGACGTAATAGGA +
Preference number: 6 (lower is better)
Translates to: GGDVLFNLIRPV*ALGFIFDDVIG
Trigger: TCCTATTACGTCATCGAATATAAATCCAAGAGCCAAGACGGGCCGTATCAGATTAAAGAGGACATCACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262963.10
ENST00000587303.5
ENST00000588012.5
ENST00000588552.5
ENST00000592099.5
CDS TCA 72 bp ATTGGTGCATTTTACAAACCTCTAGCTACAGAGCGCTaGTTGGTGCATTTTTACAGAGTGCTGATTGGTGCA +
Preference number: 6 (lower is better)
Translates to: IGAFYKPLATER*LVHFYRVLIGA
Trigger: TGCACCAATCAGCACTCTGTAAAAATGCACCAATCAGCGCTCTGTAGCTAGAGGTTTGTAAAATGCACCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588552.5