RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000155093, ENSG00000282185

Ensembl transcript IDs: ENST00000389413.7, ENST00000389416.8, ENST00000389418.9, ENST00000404321.3, ENST00000409483.5, ENST00000631503.1, ENST00000632665.1, ENST00000633393.1, ENST00000633583.1, ENST00000648371.1

Found 919 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTaGCAGCTTCCCCGGCCACTCCTGCACAGTGGATCCACCCTCCCG +
Preference number: 1 (lower is better)
Translates to: EMPNVPCVPGGLTEC*QLPRPLLHSGSTLP
Trigger: CGGGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp TGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTaGACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACA +
Preference number: 1 (lower is better)
Translates to: CRAASLSAASFPGHS*TVDPPSRKWQMTST
Trigger: TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 90 bp TCCTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTaGTCTCCTTCTCTCCCAGGAGGGAAATGTCCCCTCTCTGGGGCC +
Preference number: 1 (lower is better)
Translates to: SSPGREMLAALSELP*SPSLPGGKCPLSGA
Trigger: GGCCCCAGAGAGGGGACATTTCCCTCCTGGGAGAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp AGAGAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTaGTGCCAGCTTCCCCGGCCACTCCTGCACAGTGGATCCACCCTC +
Preference number: 1 (lower is better)
Translates to: REMPNVPCVPGGLTE*CQLPRPLLHSGSTL
Trigger: GAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 90 bp TTCTCACTTCCCTTCCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTaGTCTCCTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGT +
Preference number: 1 (lower is better)
Translates to: FSLPFQALRSACRSP*SPLPGGKCSQPSPS
Trigger: ACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGGAAGGGAAGTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 90 bp TCAAAGAGAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTaGGTGCTGCCAGCTTCCCCGGCCACTCCTGCACAGTGGATCCAC +
Preference number: 1 (lower is better)
Translates to: SKRNAKRALCAGRPH*VLPASPATPAQWIH
Trigger: GTGGATCCACTGTGCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 90 bp CCGGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATaGCAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTA +
Preference number: 1 (lower is better)
Translates to: PATPAQWIHPPESGR*QAHSSWKPPRTCWL
Trigger: TAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CCA 90 bp AGCTTCCCCGGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTaGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTG +
Preference number: 1 (lower is better)
Translates to: SFPGHSCTVDPPSRK*QMTSTLFLETASNV
Trigger: CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 90 bp GAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTaGACCCCACACAGGAAATCTGCAGCCCACACAGCTGCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: EECCGKGGMEVRFLR*TPHRKSAAHTAASV
Trigger: CACAGAGGCAGCTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp CGCAGTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTaGCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTC +
Preference number: 1 (lower is better)
Translates to: RSVDGDAARSCDCLT*PEAAGRSVLSLRLL
Trigger: GAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp CGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTaGTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCACA +
Preference number: 1 (lower is better)
Translates to: RGPGRVRVLPGTLIA*SMPRFVLPGCGYLT
Trigger: TGTGAGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp CGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTaGAGCCCACACAGCTGCCTCTGTGCCGCCTTCCATGTGATCATC +
Preference number: 1 (lower is better)
Translates to: RDGGAFSTLNPTQEI*SPHSCLCAAFHVII
Trigger: GATGATCACATGGAAGGCGGCACAGAGGCAGCTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp CTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCC +
Preference number: 1 (lower is better)
Translates to: LSLRLLPMINSLKEK*QTCLVCRAASLSAA
Trigger: GGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp ATCTATCTAAGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTaGGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACA +
Preference number: 1 (lower is better)
Translates to: IYLRWRNAVGRAGWR*VFYAEPHTGNLQPT
Trigger: TGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCTTAGATAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CCA 90 bp GTGTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATaGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTAC +
Preference number: 1 (lower is better)
Translates to: VFPLVGPLESTIYLR*RNAVGRAGWRCVFY
Trigger: GTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CCA 90 bp AGTACCATCTATCTAAGATGGAGGAATGCTGTGGGAAGGGCGGGATaGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAG +
Preference number: 1 (lower is better)
Translates to: STIYLRWRNAVGRAG*RCVFYAEPHTGNLQ
Trigger: CTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCTTAGATAGATGGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp GACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTaGATTGTTAACACAACTTCAACCAAGAAGGTGAACGGGTGCTTT +
Preference number: 1 (lower is better)
Translates to: DKHTLPGNRLERAGY*IVNTTSTKKVNGCF
Trigger: AAAGCACCCGTTCACCTTCTTGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 90 bp TCGGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTaGTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGAT +
Preference number: 1 (lower is better)
Translates to: SDTQMLFCQIRIIST*LGLHDVKTRGSLSD
Trigger: ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCCGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGGCCTCACTGAGTGCTaGCAGCTTCCCCGGCCACTC +
Preference number: 2 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDGLTEC*QLPRPL
Trigger: GAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGAGAAATGCCAAACGTaGCTTGTGTGCCGGGCGGCC +
Preference number: 2 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDEKCQT*LVCRAA
Trigger: GGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGCCACTCCTGCACAGTaGATCCACCCTCCCGAAAGT +
Preference number: 2 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDATPAQ*IHPPES
Trigger: ACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGGTCCGGGACGTGCCTaGAGGAGCCAGCGGGGGCCT +
Preference number: 2 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLGPGRA*RSQRGP
Trigger: AGGCCCCCGCTGGCTCCTCCAGGCACGTCCCGGACC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGTAACTTTGCAAAGGTaGGGTCAGGGGAGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDVTLQR*GQGSAS
Trigger: GCTGGCACTCCCCTGACCTCACCTTTGCAAAGTTAC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCACAGGTCCGGGACGTaGCTGGAGGAGCCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLHRSGT*LEEPAG
Trigger: CCCCGCTGGCTCCTCCAGGCACGTCCCGGACCTGTG...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCGCCGGGCGGCCTCACTaGGTGCTGCCAGCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSAGRPH*VLPASP
Trigger: CGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGC...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACGCAGCGAGGAGCTGTaGTTGTCTCACTTGCCCCGA +
Preference number: 2 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSRSEEL*LSHLPR
Trigger: TCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGTCACTCTGCTTGGGCTaGCAGGTGTGGCTGACGGGG +
Preference number: 2 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRSLCLG*QVWLTG
Trigger: CCCCGTCAGCCACACCTGTCAGCCCAAGCAGAGTGA...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACAAACGTGCCTTGTGTaGCGGGCGGCCTCACTGAGT +
Preference number: 2 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSQTCLV*RAASLS
Trigger: ACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACTGTGATTGTCTCACTTaGCCCGAAGCTGCAGGACGT +
Preference number: 2 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDCDCLT*PEAAGR
Trigger: ACGTCCTGCAGCTTCGGGGCAAGTGAGACAATCACA...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGGCCGGGCGGCCTCACTaGGTGCTGCCAGCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLAGRPH*VLPASP
Trigger: CGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGC...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCGCGTGCAGGTCGCCCTaGTCTCCTCTCCCGGGAGGG +
Preference number: 2 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPACRSP*SPLPGG
Trigger: CCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGC...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGCCACTCCTGCACAGTaGATCCACCCTCCCGAAAGT +
Preference number: 2 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSATPAQ*IHPPES
Trigger: ACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAAGTGGGCACTACTCATaGGGTGCACAGGTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSSGHYS*GAQVSA
Trigger: GGCAGACACCTGTGCACCCCATGAGTAGTGCCCACT...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTACCCGGCGCAGTGTTaGTGGAGACGCAGCGAGGAG +
Preference number: 2 (lower is better)
Translates to: LSREGNARSPLRVALISFYPAQC*WRRSEE
Trigger: CTCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTA...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGGTCCGGGACGTGCCTaGAGGAGCCAGCGGGGGCCT +
Preference number: 2 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEGPGRA*RSQRGP
Trigger: AGGCCCCCGCTGGCTCCTCCAGGCACGTCCCGGACC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCCCGAAAGTGGCAGATaGCAAGCACACTCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRPESGR*QAHSSW
Trigger: CCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGGAGAAATGCCAAACGTaGCTTGTGTGCCGGGCGGCC +
Preference number: 2 (lower is better)
Translates to: VRSGECQPQVGTTHGVHREKCQT*LVCRAA
Trigger: GGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTC...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAACAAGCACACTCTTCCTaGAAACCGCCTCGAACGTGC +
Preference number: 2 (lower is better)
Translates to: PGSTQCVQVALISSPGREQAHSS*KPPRTC
Trigger: GCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTG...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCTTCAACCAAGAAGGTaGACGGGTGCTTTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDLQPRR*TGALRK
Trigger: TTTTCTTAAAGCACCCGTTCACCTTCTTGGTTGAAG...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGATCTCAATGTTGGGGTaGATCTGTAACTTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRISMLG*ICNFAK
Trigger: CTTTGCAAAGTTACAGATGCACCCCAACATTGAGAT...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCGAAATGTCCCCTCTCTaGGGCCCCACAGGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSEMSPL*GPTGPG
Trigger: TCCCGGACCTGTGGGGCCCCAGAGAGGGGACATTTC...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCGCCGGGCGGCCTCACTaGGTGCTGCCAGCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECAGRPH*VLPASP
Trigger: CGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGC...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGTAACTTTGCAAAGGTaGGGTCAGGGGAGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRVTLQR*GQGSAS
Trigger: GCTGGCACTCCCCTGACCTCACCTTTGCAAAGTTAC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGGCCTCACTGAGTGCTaGCAGCTTCCCCGGCCACTC +
Preference number: 2 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEGLTEC*QLPRPL
Trigger: GAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCCACTTGCCCCGAAGCTaGAGGACGTTCAGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: LSREGNARSPLRVALISFHLPRS*RTFSSV
Trigger: GACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTG...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CAA 90 bp GCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTaGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCAC +
Preference number: 2 (lower is better)
Translates to: AGAWQGSCAPGDPHS*LNAQICSSWLWLSH
Trigger: GTGAGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCTCAGATCATGATTCCTaGCAACATCCGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLSDHDS*QHPWGG
Trigger: CCCACCCCACGGATGTTGTCAGGAATCATGATCTGA...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAATACCCGGCGCAGTGTTaGTGGAGACGCAGCGAGGAG +
Preference number: 2 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEYPAQC*WRRSEE
Trigger: CTCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTA...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCATCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGC +
Preference number: 2 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSSLKEK*QTCLVC
Trigger: GCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGA...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCGAGCCAGCGGGGGCCTaGCAGGGTTCGTGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECEPAGA*QGSCAP
Trigger: GGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTC...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCAAACGTGCCTTGTGTaGCGGGCGGCCTCACTGAGT +
Preference number: 2 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQQTCLV*RAASLS
Trigger: ACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGAGAAATGCCAAACGTaGCTTGTGTGCCGGGCGGCC +
Preference number: 2 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEEKCQT*LVCRAA
Trigger: GGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACCCTCCCGAAAGTaGCAGATGACAAGCACACTC +
Preference number: 2 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSPPSRK*QMTSTL
Trigger: GAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACATCAGATCATGATTCCTaGCAACATCCGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTSDHDS*QHPWGG
Trigger: CCCACCCCACGGATGTTGTCAGGAATCATGATCTGA...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCTGTGATTGTCTCACTTaGCCCGAAGCTGCAGGACGT +
Preference number: 2 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPCDCLT*PEAAGR
Trigger: ACGTCCTGCAGCTTCGGGGCAAGTGAGACAATCACA...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCGGGACCCTCATAGCTTaGTCAATGCCCAGATTTGTT +
Preference number: 2 (lower is better)
Translates to: LSREGNARSPLRVALISFGTLIA*SMPRFV
Trigger: AACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCC...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACAGCCCTCTCCGAGTTaGCCTGATCTCCTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEQPSPS*PDLLLS
Trigger: GGAGAGAAGGAGATCAGGGCAACTCGGAGAGGGCTG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCATCAGATCATGATTCCTaGCAACATCCGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: VDGDAARSCDCLTCPEAASDHDS*QHPWGG
Trigger: CCCACCCCACGGATGTTGTCAGGAATCATGATCTGA...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCGTGCCGCCTTCCATGTaGTCATCTTGGTCAATGAAG +
Preference number: 2 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSVPPSM*SSWSMK
Trigger: CTTCATTGACCAAGATGATCACATGGAAGGCGGCAC...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCGTGCCGCCTTCCATGTaGTCATCTTGGTCAATGAAG +
Preference number: 2 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPVPPSM*SSWSMK
Trigger: CTTCATTGACCAAGATGATCACATGGAAGGCGGCAC...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAAGGGCCCTATTACTATaGAGTTATAATAGAAGACAC +
Preference number: 2 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSRALLL*SYNRRH
Trigger: GTGTCTTCTATTATAACTGCATAGTAATAGGGCCCT...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTTCACTCTGCTTGGGCTaGCAGGTGTGGCTGACGGGG +
Preference number: 2 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSSLCLG*QVWLTG
Trigger: CCCCGTCAGCCACACCTGTCAGCCCAAGCAGAGTGA...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCAGTGGGCACTACTCATaGGGTGCACAGGTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECSGHYS*GAQVSA
Trigger: GGCAGACACCTGTGCACCCCATGAGTAGTGCCCACT...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CAA 90 bp TGCAGCCCACACAGCTGCCTCTGTGCCGCCTTCCATGTGATCATCTaGGTCAATGAAGTGAATTGTCCTATTTCTGGGGTAGGGGGTGAT +
Preference number: 2 (lower is better)
Translates to: CSPHSCLCAAFHVII*VNEVNCPISGVGGD
Trigger: ATCACCCCCTACCCCAGAAATAGGACAATTCACTTCATTGACCAAGATGATCACATGGAAGGCGGCACAGAGGCAGCTGTGTGGGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCAGGGCCCTATTACTATaGAGTTATAATAGAAGACAC +
Preference number: 2 (lower is better)
Translates to: LSREGNARSPLRVALISFRALLL*SYNRRH
Trigger: GTGTCTTCTATTATAACTGCATAGTAATAGGGCCCT...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCCACTTGCCCCGAAGCTaGAGGACGTTCAGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECHLPRS*RTFSSV
Trigger: GACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTG...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGGGACCCTCATAGCTTaGTCAATGCCCAGATTTGTT +
Preference number: 2 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEGTLIA*SMPRFV
Trigger: AACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGGTCCGGGACGTGCCTaGAGGAGCCAGCGGGGGCCT +
Preference number: 2 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDGPGRA*RSQRGP
Trigger: AGGCCCCCGCTGGCTCCTCCAGGCACGTCCCGGACC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCAGCTGACAGGTGTGGCTaGCGGGGCCGTCCATGGTAC +
Preference number: 2 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSADRCG*RGRPWY
Trigger: GTACCATGGACGGCCCCGTCAGCCACACCTGTCAGC...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGAACGTGCTGGCTACTaGATTGTTAACACAACTTCA +
Preference number: 2 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAERAGY*IVNTTS
Trigger: TGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGTCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGC +
Preference number: 2 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQSLKEK*QTCLVC
Trigger: GCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGA...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCATCTCAATGTTGGGGTaGATCTGTAACTTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPISMLG*ICNFAK
Trigger: CTTTGCAAAGTTACAGATGCACCCCAACATTGAGAT...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCCCTCCACCCGTAACTaGATTTTTCCACAAATCTCT +
Preference number: 2 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQPSTRN*IFPQIS
Trigger: AGAGATTTGTGGAAAAATCCAGTTACGGGTGGAGGG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCAAGCACACTCTTCCTaGAAACCGCCTCGAACGTGC +
Preference number: 2 (lower is better)
Translates to: LFFLVVVISQVSIHGGICQAHSS*KPPRTC
Trigger: GCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGACCACCCTCCCGAAAGTaGCAGATGACAAGCACACTC +
Preference number: 2 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRPPSRK*QMTSTL
Trigger: GAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATACCCGGCGCAGTGTTaGTGGAGACGCAGCGAGGAG +
Preference number: 2 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSYPAQC*WRRSEE
Trigger: CTCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTA...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGCGTGCAGGTCGCCCTaGTCTCCTCTCCCGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFACRSP*SPLPGG
Trigger: CCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCGTGCGTTTTCTACGCTaGACCCCACACAGGAAATCT +
Preference number: 2 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECVRFLR*TPHRKS
Trigger: AGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCAC...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCACTTGCCCCGAAGCTaGAGGACGTTCAGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSHLPRS*RTFSSV
Trigger: GACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTG...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAATTAAAGTCAGATCATaGTTCCTGACAACATCCGTG +
Preference number: 2 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEIKVRS*FLTTSV
Trigger: CACGGATGTTGTCAGGAATCATGATCTGACTTTAAT...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGCTGACAGGTGTGGCTaGCGGGGCCGTCCATGGTAC +
Preference number: 2 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDADRCG*RGRPWY
Trigger: GTACCATGGACGGCCCCGTCAGCCACACCTGTCAGC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCGAATCATCTCTACGTaGTTAGGTTTACATGATGTC +
Preference number: 2 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQRIIST*LGLHDV
Trigger: GACATCATGTAAACCTAAGCACGTAGAGATGATTCG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCAGCAGGGCCGGTCGGCTaGTTTCTCACTTCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSAGPVG*FLTSLP
Trigger: TGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGC...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTTTCCCCGGCCACTCCTaGACAGTGGATCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFFPGHS*TVDPPS
Trigger: GGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAA...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGTGAGGTCAGGGGAGTaGCAGCCTCAAGTGGGCACT +
Preference number: 2 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDVRSGE*QPQVGT
Trigger: AGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGAAATGTCCCCTCTCTaGGGCCCCACAGGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFEMSPL*GPTGPG
Trigger: TCCCGGACCTGTGGGGCCCCAGAGAGGGGACATTTC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGACTTCAACCAAGAAGGTaGACGGGTGCTTTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRLQPRR*TGALRK
Trigger: TTTTCTTAAAGCACCCGTTCACCTTCTTGGTTGAAG...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTTCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGC +
Preference number: 2 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSSLKEK*QTCLVC
Trigger: GCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGA...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR GCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTGAACGTGCTGGCTACTaGATTGTTAACACAACTTCA +
Preference number: 2 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSERAGY*IVNTTS
Trigger: TGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTC...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR TCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTATTAAAGTCAGATCATaGTTCCTGACAACATCCGTG +
Preference number: 2 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSIKVRS*FLTTSV
Trigger: CACGGATGTTGTCAGGAATCATGATCTGACTTTAAT...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CAA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACAATGCCAAACGTGCCTaGTGTGCCGGGCGGCCTCAC +
Preference number: 3 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDNAKRA*CAGRPH
Trigger: GTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATT...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp CCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTaGTGCCAGCTTCCCCGGCCACTCCTGCACAGTGGA +
Preference number: 3 (lower is better)
Translates to: PNVPCVPGGLTE*CQLPRPLLHSG
Trigger: TCCACTGTGCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 72 bp AATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTaGGTGCTGCCAGCTTCCCCGGCCACTCCTGCACAG +
Preference number: 3 (lower is better)
Translates to: NAKRALCAGRPH*VLPASPATPAQ
Trigger: CTGTGCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp GCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTaGACAGTGGATCCACCCTCCCGAAAGTGGCAGATG +
Preference number: 3 (lower is better)
Translates to: ASLSAASFPGHS*TVDPPSRKWQM
Trigger: CATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CAA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGTGCTGGCTACTGCATaGTTAACACAACTTCAACCA +
Preference number: 3 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRVLATA*LTQLQP
Trigger: TGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCAC...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CCA 72 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTaGCAGATGACAAGCACACTCTTCCTGGAAACCGCC +
Preference number: 3 (lower is better)
Translates to: GHSCTVDPPSRK*QMTSTLFLETA
Trigger: GGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 72 bp CCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATaGCAAGCACACTCTTCCTGGAAACCGCCTCGAACG +
Preference number: 3 (lower is better)
Translates to: PAQWIHPPESGR*QAHSSWKPPRT
Trigger: CGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 72 bp TGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTaGACCCCACACAGGAAATCTGCAGCCCACACAGCT +
Preference number: 3 (lower is better)
Translates to: CGKGGMEVRFLR*TPHRKSAAHTA
Trigger: AGCTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp AACTCTCTCAAAGAGAAATGCCAAACGTGCCTTGTGTaGCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: NSLKEKCQTCLV*RAASLSAASFP
Trigger: GGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp GATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTaGCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: DGDAARSCDCLT*PEAAGRSVLSL
Trigger: CAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp GGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTaGTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGT +
Preference number: 3 (lower is better)
Translates to: GRVRVLPGTLIA*SMPRFVLPGCG
Trigger: ACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp TGCATCTGTAACTTTGCAAAGGTGAGGTCAGGGGAGTaGCAGCCTCAAGTGGGCACTACTCATGGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: CICNFAKVRSGE*QPQVGTTHGVH
Trigger: GTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCACCTTTGCAAAGTTACAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTaGGTTTTCTACGCTGAACCCCACACAGGAAATCTG +
Preference number: 3 (lower is better)
Translates to: RWRNAVGRAGWR*VFYAEPHTGNL
Trigger: CAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CCA 72 bp CTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATaGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGC +
Preference number: 3 (lower is better)
Translates to: LVGPLESTIYLR*RNAVGRAGWRC
Trigger: GCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CAA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAAATGCCAAACGTGCCTaGTGTGCCGGGCGGCCTCAC +
Preference number: 3 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRNAKRA*CAGRPH
Trigger: GTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATT...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp CGGCTTCTCCCAATGATAAACTCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTG +
Preference number: 3 (lower is better)
Translates to: RLLPMINSLKEK*QTCLVCRAASL
Trigger: CAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGAGTTTATCATTGGGAGAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CCA 72 bp TATCTAAGATGGAGGAATGCTGTGGGAAGGGCGGGATaGAGGTGCGTTTTCTACGCTGAACCCCACACAGGA +
Preference number: 3 (lower is better)
Translates to: YLRWRNAVGRAG*RCVFYAEPHTG
Trigger: TCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCTTAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR TCA 72 bp TCTCAATGTTGGGGTGCATCTGTAACTTTGCAAAGGTaGGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTA +
Preference number: 3 (lower is better)
Translates to: SQCWGASVTLQR*GQGSASLKWAL
Trigger: TAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCACCTTTGCAAAGTTACAGATGCACCCCAACATTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp ACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTaGATTGTTAACACAACTTCAACCAAGAAGGTGAAC +
Preference number: 3 (lower is better)
Translates to: TLPGNRLERAGY*IVNTTSTKKVN
Trigger: GTTCACCTTCTTGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CAA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCGTGCTGGCTACTGCATaGTTAACACAACTTCAACCA +
Preference number: 3 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECVLATA*LTQLQP
Trigger: TGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCAC...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CAA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGTACCCGGCGCAGTGTaGATGGAGACGCAGCGAGGA +
Preference number: 3 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDVPGAV*METQRG
Trigger: TCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTAC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CAA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTAATGCCAAACGTGCCTaGTGTGCCGGGCGGCCTCAC +
Preference number: 3 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFNAKRA*CAGRPH
Trigger: GTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATT...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR-3UTR CAA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTAAACACATCTCAATGTaGGGGTGCATCTGTAACTTT +
Preference number: 3 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFKHISM*GCICNF
Trigger: AAAGTTACAGATGCACCCCAACATTGAGATGTGTTT...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR GCA 72 bp CAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTaGTTAGGTTTACATGATGTCAAAACACGTGGTTCA +
Preference number: 3 (lower is better)
Translates to: QMLFCQIRIIST*LGLHDVKTRGS
Trigger: TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGTCCGGGACGTGCCTaGAGGAGCCAGCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRGPGRA*RSQRGP
Trigger: AGGCCCCCGCTGGCTCCTCCAGGCACGTCCCGGACC...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCACAGGTCCGGGACGTaGCTGGAGGAGCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDHRSGT*LEEPAG
Trigger: CCCCGCTGGCTCCTCCAGGCACGTCCCGGACCTGTG...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGCAGCGAACGCACTGCTaGGCACCTGCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRQRTHC*APAGGG
Trigger: CCCGCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTG...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCGAGACCCGTGGTCCTaGAGGAGGCCCCCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDRDPWS*RRPPSV
Trigger: CACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCG...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACACCAGGATGAGGCGCTaGTGCGTGCGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDTRMRR*CVRRGW
Trigger: CCAGCCCCTCCGCACGCAGCAGCGCCTCATCCTGGT...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCAGCGAACGCACTGCTaGGCACCTGCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDQRTHC*APAGGG
Trigger: CCCGCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTG...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGGGATGAGACGCTGCTaGTGCGTGACGTGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDGMRRC*CVTCAG
Trigger: GCCCGCACACGTCACGCATCAGCAGCGTCTCATCCC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGTACCCGGCGCAGTGTTaGTGGAGACGCAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRYPAQC*WRRSEE
Trigger: CTCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTA...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGTCACTCTGCTTGGGCTaGCAGGTGTGGCTGACGGGG +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRSLCLG*QVWLTG
Trigger: CCCCGTCAGCCACACCTGTCAGCCCAAGCAGAGTGA...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGGCGTCGGAGGGCGTTaGCCAGGGCAGCACCGCCCT +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSGVGGR*PGQHRP
Trigger: AGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGCC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGCTGTCCTGCGCCGTATaGGTCCTGGCGAGCACGTCT +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRLSCAV*VLASTS
Trigger: AGACGTGCTCGCCAGGACCCATACGGCGCAGGACAG...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACAAAAGTCAGCCACGGTaGCGGGCAGCGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDKSQPR*RAAVPG
Trigger: CCCAGGGACCGCTGCCCGCCACCGTGGCTGACTTTT...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGAGGCTGCCGCTCACTaGGGAAGGGCCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSREAAAH*GRALRM
Trigger: CATCCTCAAGGCCCTTCCCCAGTGAGCGGCAGCCTC...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCGACGCTGCTGATGCGTaGCGTGTGCGGGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCDAADA*RVRALR
Trigger: CCTGAGGGCCCGCACACGTCACGCATCAGCAGCGTC...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACTACCCGGCGCAGTGTTaGTGGAGACGCAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDYPAQC*WRRSEE
Trigger: CTCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTA...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACACAGGTCCGGGACGTaGCTGGAGGAGCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSHRSGT*LEEPAG
Trigger: CCCCGCTGGCTCCTCCAGGCACGTCCCGGACCTGTG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCGGTCTGGTGGCCGCGTaGCCATACGCTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCGLVAA*PYAGGT
Trigger: TGTGCCGCCAGCGTATGGCCACGCGGCCACCAGACC...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCGCTGACAGGTGTGGCTaGCGGGGCCGTCCATGGTAC +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCADRCG*RGRPWY
Trigger: GTACCATGGACGGCCCCGTCAGCCACACCTGTCAGC...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGGCGTGCAGGTCGCCCTaGTCTCCTCTCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRACRSP*SPLPGG
Trigger: CCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGC...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGTGCTCCATCGCCTGTaGTGGAGGGGTCTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRVLHRL*WRGLRN
Trigger: ATTCCGAAGACCCCTCCAGCACAGGCGATGGAGCAC...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCGGCCTCACTGAGTGCTaGCAGCTTCCCCGGCCACTC +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCGLTEC*QLPRPL
Trigger: GAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCC...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGCCAGGCATCTGGTTTTaGAGCTCCCCAAACGCAGCG +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRPGIWF*SSPNAA
Trigger: CGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGG...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCGGGCAGCATAGGCACTaGGGGCCGCCATCAGATGGT +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCGQHRH*GPPSDG
Trigger: ACCATCTGATGGCGGCCCTCAGTGCCTATGCTGCCC...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGGATCGGCCCGTCGCTaGACTGGGATGAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSGSARR*TGMRRC
Trigger: GCAGCGTCTCATCCCAGTTCAGCGACGGGCCGATCC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACGAGGGGTGTCAGCATaGCGATCACCACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSRGVSA*RSPRSR
Trigger: GCGGCTGCGTGGTGATCGTCATGCTGACACCCCTCG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCCTCCCGGGAGGGAAATaGTCGCAGCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCLPGGK*SQPSPS
Trigger: ACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGGCGTCGGAGGGCGTTaGCCAGGGCAGCACCGCCCT +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLGVGGR*PGQHRP
Trigger: AGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGCC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGTCCAGGAAGGGCAGGTaGCGTCGGAGGGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRSRKGR*RRRALA
Trigger: GGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGA...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCAGGTCCTCGCGGAGCTaGGTCCGGGACCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLRSSRS*VRDPGG
Trigger: CCCTCCCGGGTCCCGGACCCAGCTCCGCGAGGACCT...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAAAGAGTCGAGACCCGTaGTCCTGCAGGAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSKSRDP*SCRRPP
Trigger: CGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTT...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAACAGCGAACGCACTGCTaGGCACCTGCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PGSTQCVQVALISSPGREQRTHC*APAGGG
Trigger: CCCGCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTG...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACCTGGTAGGCGGCAGTaGCATCTGCACCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSPGRRQ*HLHLGR
Trigger: GCGACCCAGGTGCAGATGCCACTGCCGCCTACCAGG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGTGGGAAGGGCGGGATaGAGGTGCGTTTTCTACGCT +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDVGRAG*RCVFYA
Trigger: AGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCAC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAAGGGATGAGACGCTGCTaGTGCGTGACGTGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PGSTQCVQVALISSPGREGMRRC*CVTCAG
Trigger: GCCCGCACACGTCACGCATCAGCAGCGTCTCATCCC...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGTCAGATCATGATTCCTaGCAACATCCGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRSDHDS*QHPWGG
Trigger: CCCACCCCACGGATGTTGTCAGGAATCATGATCTGA...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTGCCGGGCGGCCTCACTaGGTGCTGCCAGCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLAGRPH*VLPASP
Trigger: CGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGC...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGCGTGCAGGTCGCCCTaGTCTCCTCTCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRACRSP*SPLPGG
Trigger: CCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCGTCAGCGAACGCACTaGTGGGCACCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRRQRTH*WAPAGG
Trigger: GCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTGACG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGGTGCCGCTCCGGCCTaGACCGTCACTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSGAAPA*TVTAMN
Trigger: GTTCATTGCAGTGACGGTGCAGGCCGGAGCGGCACC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACTGTCCTGCGCCGTATaGGTCCTGGCGAGCACGTCT +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSLSCAV*VLASTS
Trigger: AGACGTGCTCGCCAGGACCCATACGGCGCAGGACAG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCACGGAGGGTGGCCTTaGGGCCATCCGCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRHGGWP*GHPPVL
Trigger: GAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGTGTCTCCACGGAGGGTaGCCTTGGGGCCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRCLHGG*PWGHPP
Trigger: AGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACA...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGGAGGCCCCCGAGTGTaGCACTCAGACGATGGACCT +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSGGPRV*HSDDGP
Trigger: AGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGAGCCAGCGGGGGCCTaGCAGGGTTCGTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLEPAGA*QGSCAP
Trigger: GGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGAAATGTCCCCTCTCTaGGGCCCCACAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSEMSPL*GPTGPG
Trigger: TCCCGGACCTGTGGGGCCCCAGAGAGGGGACATTTC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGACCCGACTCCGGTTTaGAGAATTTTCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRDPTPV*RIFSPE
Trigger: CTCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTC...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGACTCCTCGGACCAGGATaGGGCGCTGCTGCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRLLGPG*GAAACG
Trigger: TCCGCACGCAGCAGCGCCTCATCCTGGTCCGAGGAG...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCACATAGGTCAGGATaGTCTCGGAGAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDPHRSG*SRRSGH
Trigger: ATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGG...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCGTGCTCCATCGCCTGTaGTGGAGGGGTCTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCVLHRL*WRGLRN
Trigger: ATTCCGAAGACCCCTCCAGCACAGGCGATGGAGCAC...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCATCAGCCGGCTGCCTCTaGAGGTCCTTCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSSAGCL*RSFRRV
Trigger: TACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGA...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCCATCAGCTCAGCCATaGCGTCCAGCTCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRPSAQP*RPAPGH
Trigger: GTGGCCTGGAGCTGGACGGCATGGCTGAGCTGATGG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACCATGGTCCACGCCTTaGATCAGGCCAGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSPWSTP*IRPAIS
Trigger: GCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCCGCTCTCCCAGGGCTaGCTCGAGCTACTCCATGGT +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRPLSQG*LELLHG
Trigger: ACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGGAGGACGCCCAGGATaGAGGCGAGGGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLGGRPG*RRGRPG
Trigger: CCCTGGTCTCCCTCGCCTGCATCCTGGGCGTCCTCC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGGAACTGCGTCACGGTaGGCGTCTCGTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSGTASR*ASRWSA
Trigger: TGCAGACCAACGAGACGCGCACCGTGACGCAGTTCC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCCTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCLWSLK*SRVAAI
Trigger: TATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAG...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCCCTCGAGCTACTCCATaGTCCACGCCTTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCPRATP*STPCIR
Trigger: CCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGG...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGCAGCGGTCCCTGGGTaGCGATGTACGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLAAVPG*RCTRGS
Trigger: GGAACCCCGCGTACATCGCCACCCAGGGACCGCTGC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCGCGGGCAGCGGTCCCTaGGTGGCGATGTACGCGGGG +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPAGSGP*VAMYAG
Trigger: CCCCGCGTACATCGCCACCCAGGGACCGCTGCCCGC...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCAGTGGGCACTACTCATaGGGTGCACAGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCSGHYS*GAQVSA
Trigger: GGCAGACACCTGTGCACCCCATGAGTAGTGCCCACT...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGCAGGGCCGGTCGGCTaGTTTCTCACTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSAGPVG*FLTSLP
Trigger: TGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCTCCTTCAGGAGGGTATaGATCCGTGCTCCATCGCCT +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCSFRRV*IRAPSP
Trigger: AGGCGATGGAGCACGGATTCATACCCTCCTGAAGGA...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTTCGCTGAGGGCCTCCTaGGCACCCGCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLSLRAS*APAGRL
Trigger: GAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGA...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCGGGATGAGACGCTGCTaGTGCGTGACGTGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFGMRRC*CVTCAG
Trigger: GCCCGCACACGTCACGCATCAGCAGCGTCTCATCCC...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGGATCGGCCCGTCGCTaGACTGGGATGAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRGSARR*TGMRRC
Trigger: GCAGCGTCTCATCCCAGTTCAGCGACGGGCCGATCC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCCCCGAAAGTGGCAGATaGCAAGCACACTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCPESGR*QAHSSW
Trigger: CCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGG...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGCTGACAGGTGTGGCTaGCGGGGCCGTCCATGGTAC +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRADRCG*RGRPWY
Trigger: GTACCATGGACGGCCCCGTCAGCCACACCTGTCAGC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCTTCTGGGGTAGGGGGTaGTGGCGAATCGGATACTCA +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCFWGRG*WRIGYS
Trigger: TGAGTATCCGATTCGCCATCACCCCCTACCCCAGAA...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCGTGCCGGAAAGCTTCTaGAACGCCACGCGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFVPESF*NATRRR
Trigger: GCGCCTGCGCGTGGCGTTGCAGAAGCTTTCCGGCAC...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR GCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCGCCCCGGGCTCCGAATaGGGCTGCTGCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPAPGSE*GCCPSR
Trigger: TCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGC...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGGCTGGACCTCCAATTaGAGGCCGTCGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRGWTSN*RPSLRA
Trigger: GGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGACGTCAGCGAACGCACTaGTGGGCACCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRRQRTH*WAPAGG
Trigger: GCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTGACG...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCAAACGTGCCTTGTGTaGCGGGCGGCCTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRQTCLV*RAASLS
Trigger: ACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGGAGAAATGCCAAACGTaGCTTGTGTGCCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSREKCQT*LVCRAA
Trigger: GGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTC...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGCGCCGTATGGGTCCTaGCGAGCACGTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRAPYGS*RARLRL
Trigger: CAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTGTCTCCACGGAGGGTaGCCTTGGGGCCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFCLHGG*PWGHPP
Trigger: AGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACA...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGCCTGGTAGGCGGCAGTaGCATCTGCACCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHRPGRRQ*HLHLGR
Trigger: GCGACCCAGGTGCAGATGCCACTGCCGCCTACCAGG...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGACTCAGGTCGGTCTGGTaGCCGCGTGGCCATACGCTG +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRLRSVW*PRGHTL
Trigger: CAGCGTATGGCCACGCGGCCACCAGACCGACCTGAG...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCCACGAACGAGCTGTTaGGCTCCGCCTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLPRTSC*APPGRR
Trigger: GCGCCTACCAGGCGGAGCCCAACAGCTCGTTCGTGG...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGCCACGAACGAGCTGTTaGGCTCCGCCTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHRPRTSC*APPGRR
Trigger: GCGCCTACCAGGCGGAGCCCAACAGCTCGTTCGTGG...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAAGTGCCAGCCTCAAGTaGGCACTACTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSSASLK*ALLMGC
Trigger: GCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACT...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCGAGCCAGCGGGGGCCTaGCAGGGTTCGTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPEPAGA*QGSCAP
Trigger: GGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTC...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAAAGGCCTGGGCATTCTTaGGGGTGCACGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PGSTQCVQVALISSPGRERPGHS*GCTQKV
Trigger: TACCTTCTGCGTGCACCCTCAAGAATGCCCAGGCCT...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGAGGCCTGGGCATTCTTaGGGGTGCACGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRRPGHS*GCTQKV
Trigger: TACCTTCTGCGTGCACCCTCAAGAATGCCCAGGCCT...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGGCAGTCTCCTCTTCTaGAGACAGGGAAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSGSLLF*RQGRLR
Trigger: CCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGTCCAGGAGGGACCTTaGGGAGGAAGGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLVQEGP*GGRDSS
Trigger: CGAGGAGTCCCTTCCTCCTCAAGGTCCCTCCTGGAC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCTTTGGCCATCTTGTTaGGAACCATGTCGATCAGGA +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDLWPSC*EPCRSG
Trigger: TCCTGATCGACATGGTTCTCAACAAGATGGCCAAAG...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACGCCCCGGGCTCCGAATaGGGCTGCTGCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYAPGSE*GCCPSR
Trigger: TCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGC...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGGAGGACGCCCAGGATaGAGGCGAGGGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQGGRPG*RRGRPG
Trigger: CCCTGGTCTCCCTCGCCTGCATCCTGGGCGTCCTCC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACACTTGTTTACTTTTCTaGGGAAGTCCAGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDTCLLF*GSPGGT
Trigger: GGTCCCTCCTGGACTTCCGCAGAAAAGTAAACAAGT...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCTCCCGGGAGGGAAATaGTCGCAGCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLLPGGK*SQPSPS
Trigger: ACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCCAGGCTCTACGCAGTaGGTGCAGGTCGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLPGSTQ*VQVALI
Trigger: GATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGGCGTCGGAGGGCGTTaGCCAGGGCAGCACCGCCCT +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATAGVGGR*PGQHRP
Trigger: AGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGCC...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACATCCAGGAAGGGCAGGTaGCGTCGGAGGGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTSRKGR*RRRALA
Trigger: GGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGA...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGAGGTCCTCGCGGAGCTaGGTCCGGGACCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQRSSRS*VRDPGG
Trigger: CCCTCCCGGGTCCCGGACCCAGCTCCGCGAGGACCT...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAAGGTCCTCGCGGAGCTaGGTCCGGGACCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATARSSRS*VRDPGG
Trigger: CCCTCCCGGGTCCCGGACCCAGCTCCGCGAGGACCT...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCCAGGCATCTGGTTTTaGAGCTCCCCAAACGCAGCG +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRPGIWF*SSPNAA
Trigger: CGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACAGGTCTGGTGGCCGCGTaGCCATACGCTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTGLVAA*PYAGGT
Trigger: TGTGCCGCCAGCGTATGGCCACGCGGCCACCAGACC...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCGCCCTCAGGTCGGTCTaGTGGCCGCGTGGCCATACG +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSALRSV*WPRGHT
Trigger: CGTATGGCCACGCGGCCACCAGACCGACCTGAGGGC...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGCAGCGGTCCCTGGGTaGCGATGTACGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQAAVPG*RCTRGS
Trigger: GGAACCCCGCGTACATCGCCACCCAGGGACCGCTGC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGGCGGGCAGCGGTCCCTaGGTGGCGATGTACGCGGGG +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQAGSGP*VAMYAG
Trigger: CCCCGCGTACATCGCCACCCAGGGACCGCTGCCCGC...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCGGGCAGCGGTCCCTaGGTGGCGATGTACGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERAGSGP*VAMYAG
Trigger: CCCCGCGTACATCGCCACCCAGGGACCGCTGCCCGC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCGGGCAGCGGTCCCTaGGTGGCGATGTACGCGGGG +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAAGSGP*VAMYAG
Trigger: CCCCGCGTACATCGCCACCCAGGGACCGCTGCCCGC...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGGAGGCTGCCGCTCACTaGGGAAGGGCCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHREAAAH*GRALRM
Trigger: CATCCTCAAGGCCCTTCCCCAGTGAGCGGCAGCCTC...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAAGCCACTCCTGCACAGTaGATCCACCCTCCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: PGSTQCVQVALISSPGREATPAQ*IHPPES
Trigger: ACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGC...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAATTGCAGGCCGTCGCTaGGGGCCTCCTGAGCACCCG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAIAGRR*GPPEHP
Trigger: CGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAAT...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCGACGCTGCTGATGCGTaGCGTGTGCGGGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCDAADA*RVRALR
Trigger: CCTGAGGGCCCGCACACGTCACGCATCAGCAGCGTC...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGGGATGAGACGCTGCTaGTGCGTGACGTGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQGMRRC*CVTCAG
Trigger: GCCCGCACACGTCACGCATCAGCAGCGTCTCATCCC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCCTCCTCGGACCAGGATaGGGCGCTGCTGCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLLLGPG*GAAACG
Trigger: TCCGCACGCAGCAGCGCCTCATCCTGGTCCGAGGAG...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAAGCGTTGATGTAGTCTaGGTGGCTGTGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSSVDVV*VAVAVL
Trigger: GAGAACAGCCACAGCCACTCAGACTACATCAACGCT...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCGAGGGGTGTCAGCATaGCGATCACCACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSRGVSA*RSPRSR
Trigger: GCGGCTGCGTGGTGATCGTCATGCTGACACCCCTCG...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCACTGGGGAAGGGCCTTaGGGATGGCGTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLTGEGP*GWRSPP
Trigger: AGGAGGTGAACGCCATCCTCAAGGCCCTTCCCCAGT...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGCTTCAACCAAGAAGGTaGACGGGTGCTTTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRLQPRR*TGALRK
Trigger: TTTTCTTAAAGCACCCGTTCACCTTCTTGGTTGAAG...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCGTGCAGGTCGCCCTaGTCTCCTCTCCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERACRSP*SPLPGG
Trigger: CCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGTGCTTAGGTTTACATaGTGTCAAAACACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRVLRFT*CQNTWF
Trigger: GAACCACGTGTTTTGACATCATGTAAACCTAAGCAC...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGCCATGGTCCACGCCTTaGATCAGGCCAGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHRPWSTP*IRPAIS
Trigger: GCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGG...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCACGAGACCCGTGGTCCTaGAGGAGGCCCCCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAARDPWS*RRPPSV
Trigger: CACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCG...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAAGCCCCGGGCTCCGAATaGGGCTGCTGCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEAPGSE*GCCPSR
Trigger: TCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGC...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAACCCGCTGGAAGGCTCTaGTCCTCCTTCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQPAGRL*SSFEGP
Trigger: TGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGG...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCACTGCTGGGCACCTaGAGGAGGCGGGCGACGTCC +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERALLGT*RRRATS
Trigger: GGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGGAGGACGCCCAGGATaGAGGCGAGGGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLGGRPG*RRGRPG
Trigger: CCCTGGTCTCCCTCGCCTGCATCCTGGGCGTCCTCC...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGGAGGACGCCCAGGATaGAGGCGAGGGAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAGGRPG*RRGRPG
Trigger: CCCTGGTCTCCCTCGCCTGCATCCTGGGCGTCCTCC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCACCAGGATGAGGCGCTaGTGCGTGCGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLTRMRR*CVRRGW
Trigger: CCAGCCCCTCCGCACGCAGCAGCGCCTCATCCTGGT...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCTCTCCCACACCATCTaGCAAAAGTCAGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRLSHTI*QKSATV
Trigger: CACCGTGGCTGACTTTTGGCAGATGGTGTGGGAGAG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGGAACTGCGTCACGGTaGGCGTCTCGTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRGTASR*ASRWSA
Trigger: TGCAGACCAACGAGACGCGCACCGTGACGCAGTTCC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAACACTTGCCCCGAAGCTaGAGGACGTTCAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: PGSTQCVQVALISSPGREHLPRS*RTFSSV
Trigger: GACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTG...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACACAGGTCCGGGACGTaGCTGGAGGAGCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEHRSGT*LEEPAG
Trigger: CCCCGCTGGCTCCTCCAGGCACGTCCCGGACCTGTG...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACCACAGGTCCGGGACGTaGCTGGAGGAGCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINHRSGT*LEEPAG
Trigger: CCCCGCTGGCTCCTCCAGGCACGTCCCGGACCTGTG...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTGCAGCCCACACAGCTaGCTCTGTGCCGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFCSPHS*LCAAFH
Trigger: ATGGAAGGCGGCACAGAGGCAGCTGTGTGGGCTGCA...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGTGCAGCCCACACAGCTaGCTCTGTGCCGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHRCSPHS*LCAAFH
Trigger: ATGGAAGGCGGCACAGAGGCAGCTGTGTGGGCTGCA...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCATCTAAGATGGAGGAATaGTGTGGGAAGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSSKMEE*CGKGGM
Trigger: CATCCCGCCCTTCCCACAGCATTCCTCCATCTTAGA...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCTGAGCTCATCTGGCTaGAGCTGGCCGAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSLSSSG*SWPRVR
Trigger: GCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAG...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGCCCTCAGGTCGGTCTaGTGGCCGCGTGGCCATACG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAALRSV*WPRGHT
Trigger: CGTATGGCCACGCGGCCACCAGACCGACCTGAGGGC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGGCCCTCAGGTCGGTCTaGTGGCCGCGTGGCCATACG +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLALRSV*WPRGHT
Trigger: CGTATGGCCACGCGGCCACCAGACCGACCTGAGGGC...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGCCACGAACGAGCTGTTaGGCTCCGCCTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: PPSRKWQMTSTLFLETASPRTSC*APPGRR
Trigger: GCGCCTACCAGGCGGAGCCCAACAGCTCGTTCGTGG...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCCAGGGAGCGGTTCTTaGGCACGTTCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLPGSGS*ARSPPS
Trigger: AGAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGG...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGCAGCGGTCCCTGGGTaGCGATGTACGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAAAVPG*RCTRGS
Trigger: GGAACCCCGCGTACATCGCCACCCAGGGACCGCTGC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGCAATGAACAATTATTaGACAAGAACGGCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRAMNNY*TRTAPV
Trigger: TACAGGGGCCGTTCTTGTCCAATAATTGTTCATTGC...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CAA 72 bp TGGCTGACGGGGCCGTCCATGGTACCCGGCGCAGTGTaGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCA +
Preference number: 4 (lower is better)
Translates to: WLTGPSMVPGAV*METQRGAVIVS
Trigger: TGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTACCATGGACGGCCCCGTCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGGGCAGCATAGGCACTaGGGGCCGCCATCAGATGGT +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQGQHRH*GPPSDG
Trigger: ACCATCTGATGGCGGCCCTCAGTGCCTATGCTGCCC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCGCTGAGGGCCTCCTaGGCACCCGCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGSLRAS*APAGRL
Trigger: GAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGA...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTATTGCAGGCCGTCGCTaGGGGCCTCCTGAGCACCCG +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATIAGRR*GPPEHP
Trigger: CGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAAT...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTATTGCAGGCCGTCGCTaGGGGCCTCCTGAGCACCCG +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAIAGRR*GPPEHP
Trigger: CGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAAT...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCGGCGGAGGCAGTAGATaGGGCCAGAGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCGGGSR*GQRPGG
Trigger: TCCTCCTGGCCTCTGGCCTCATCTACTGCCTCCGCC...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAAGACGCTGCTGATGCGTaGCGTGTGCGGGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEDAADA*RVRALR
Trigger: CCTGAGGGCCCGCACACGTCACGCATCAGCAGCGTC...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACTCCTCGGACCAGGATaGGGCGCTGCTGCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAELLGPG*GAAACG
Trigger: TCCGCACGCAGCAGCGCCTCATCCTGGTCCGAGGAG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCTCCTCGGACCAGGATaGGGCGCTGCTGCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLLLGPG*GAAACG
Trigger: TCCGCACGCAGCAGCGCCTCATCCTGGTCCGAGGAG...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCCGAGGGGTGTCAGCATaGCGATCACCACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLRGVSA*RSPRSR
Trigger: GCGGCTGCGTGGTGATCGTCATGCTGACACCCCTCG...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACAGTCCAGGAGGGACCTTaGGGAGGAAGGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTVQEGP*GGRDSS
Trigger: CGAGGAGTCCCTTCCTCCTCAAGGTCCCTCCTGGAC...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGCTGACAGGTGTGGCTaGCGGGGCCGTCCATGGTAC +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAADRCG*RGRPWY
Trigger: GTACCATGGACGGCCCCGTCAGCCACACCTGTCAGC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCCGGAAAGCTTCTaGAACGCCACGCGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNVPESF*NATRRR
Trigger: GCGCCTGCGCGTGGCGTTGCAGAAGCTTTCCGGCAC...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR GCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGGTGCTCCATCGCCTGTaGTGGAGGGGTCTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHRVLHRL*WRGLRN
Trigger: ATTCCGAAGACCCCTCCAGCACAGGCGATGGAGCAC...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCGAGACCCGTGGTCCTaGAGGAGGCCCCCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLRDPWS*RRPPSV
Trigger: CACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCG...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGCACTGCTGGGCACCTaGAGGAGGCGGGCGACGTCC +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIALLGT*RRRATS
Trigger: GGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGC...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGACCAGGATGAGGCGCTaGTGCGTGCGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQTRMRR*CVRRGW
Trigger: CCAGCCCCTCCGCACGCAGCAGCGCCTCATCCTGGT...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGGGTGCCGCTCCGGCCTaGACCGTCACTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: PPSRKWQMTSTLFLETASGAAPA*TVTAMN
Trigger: GTTCATTGCAGTGACGGTGCAGGCCGGAGCGGCACC...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACCGATCAGGACGTAGGTaGCGCTCCGGCCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYRSGRR*RSGLHR
Trigger: ACGGTGCAGGCCGGAGCGGCACCTACGTCCTGATCG...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGTGCTCCAGGGTCGCTaGGATATCAATCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSVLQGR*DINLFS
Trigger: GCTAAAGAGATTGATATCGCAGCGACCCTGGAGCAC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACACCAGGCTCTACGCAGTaGGTGCAGGTCGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTPGSTQ*VQVALI
Trigger: GATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGACACAGCTGCCTCTGTaGCGCCTTCCATGTGATCAT +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRTQLPL*RLPCDH
Trigger: ATGATCACATGGAAGGCGGCACAGAGGCAGCTGTGT...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCAGGGCGGGATGGAGGTaGGTTTTCTACGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLRAGWR*VFYAEP
Trigger: GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCT...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCCAGGAAGGGCAGGTaGCGTCGGAGGGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGSRKGR*RRRALA
Trigger: GGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGA...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTTCCAGGAAGGGCAGGTaGCGTCGGAGGGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERSRKGR*RRRALA
Trigger: GGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGA...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGCGCCGTATGGGTCCTaGCGAGCACGTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAAPYGS*RARLRL
Trigger: CAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGACTCCATCGCCTGTGCTaGAGGGGTCTTCGGAATCTC +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRLHRLC*RGLRNL
Trigger: GAGATTCCGAAGACCCCTCCAGCACAGGCGATGGAG...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACAGGAGGCCCCCGAGTGTaGCACTCAGACGATGGACCT +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTGGPRV*HSDDGP
Trigger: AGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCC...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAAGAGTCGAGACCCGTaGTCCTGCAGGAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCKSRDP*SCRRPP
Trigger: CGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTT...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCTCTTCCTCGGAAGGCTaGACCTCCAATTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLSSSEG*TSNCRP
Trigger: CGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGA...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGATCTTCCTCGGAAGGCTaGACCTCCAATTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRSSSEG*TSNCRP
Trigger: CGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGA...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCTCAGTGGTCACGTTTTaGACATTGGCGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCSVVTF*TLALTL
Trigger: CAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGA...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTGGTCTGGTGGCCGCGTaGCCATACGCTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLAGLVAA*PYAGGT
Trigger: TGTGCCGCCAGCGTATGGCCACGCGGCCACCAGACC...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGCCCTCAGGTCGGTCTaGTGGCCGCGTGGCCATACG +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEALRSV*WPRGHT
Trigger: CGTATGGCCACGCGGCCACCAGACCGACCTGAGGGC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGCAGCGGTCCCTGGGTaGCGATGTACGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATAAAVPG*RCTRGS
Trigger: GGAACCCCGCGTACATCGCCACCCAGGGACCGCTGC...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCAGCGGTCCCTGGGTaGCGATGTACGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLAAVPG*RCTRGS
Trigger: GGAACCCCGCGTACATCGCCACCCAGGGACCGCTGC...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGAAAAGTCAGCCACGGTaGCGGGCAGCGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLKSQPR*RAAVPG
Trigger: CCCAGGGACCGCTGCCCGCCACCGTGGCTGACTTTT...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCAACTGCTCCTTCGTCTaGACCATGCCGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFNCSFV*TMPGLW
Trigger: CCAGAGACCCGGCATGGTCCAGACGAAGGAGCAGTT...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGAGCCAGCGGGGGCCTaGCAGGGTTCGTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALEPAGA*QGSCAP
Trigger: GGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTC...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACAGAAATGTCCCCTCTCTaGGGCCCCACAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTEMSPL*GPTGPG
Trigger: TCCCGGACCTGTGGGGCCCCAGAGAGGGGACATTTC...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCGGGCAGCATAGGCACTaGGGGCCGCCATCAGATGGT +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCGQHRH*GPPSDG
Trigger: ACCATCTGATGGCGGCCCTCAGTGCCTATGCTGCCC...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGATCTTCTTGCTCCGCCTaGGGAGGCAGGAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRSSCSA*GGRNLS
Trigger: ACTCAAGTTCCTGCCTCCTCAGGCGGAGCAAGAAGA...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCGGCGGAGGCAGTAGATaGGGCCAGAGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGGGGSR*GQRPGG
Trigger: TCCTCCTGGCCTCTGGCCTCATCTACTGCCTCCGCC...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCTCCTTCAGCCTGTGCTaGGAGCTATGGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPSFSLC*ELWRRQ
Trigger: CTGCCTCCGCCATAGCTCTCAGCACAGGCTGAAGGA...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTGGATCGGCCCGTCGCTaGACTGGGATGAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLAGSARR*TGMRRC
Trigger: GCAGCGTCTCATCCCAGTTCAGCGACGGGCCGATCC...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCGAGGGGTGTCAGCATaGCGATCACCACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERARGVSA*RSPRSR
Trigger: GCGGCTGCGTGGTGATCGTCATGCTGACACCCCTCG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCACGAGGGGTGTCAGCATaGCGATCACCACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATARGVSA*RSPRSR
Trigger: GCGGCTGCGTGGTGATCGTCATGCTGACACCCCTCG...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGTCCAGGAGGGACCTTaGGGAGGAAGGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAVQEGP*GGRDSS
Trigger: CGAGGAGTCCCTTCCTCCTCAAGGTCCCTCCTGGAC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTCCAGGAGGGACCTTaGGGAGGAAGGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNVQEGP*GGRDSS
Trigger: CGAGGAGTCCCTTCCTCCTCAAGGTCCCTCCTGGAC...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCACTGGGGAAGGGCCTTaGGGATGGCGTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSTGEGP*GWRSPP
Trigger: AGGAGGTGAACGCCATCCTCAAGGCCCTTCCCCAGT...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCTCACTCTGCTTGGGCTaGCAGGTGTGGCTGACGGGG +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLSLCLG*QVWLTG
Trigger: CCCCGTCAGCCACACCTGTCAGCCCAAGCAGAGTGA...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACTCACTCTGCTTGGGCTaGCAGGTGTGGCTGACGGGG +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNSLCLG*QVWLTG
Trigger: CCCCGTCAGCCACACCTGTCAGCCCAAGCAGAGTGA...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGTAACTTTGCAAAGGTaGGGTCAGGGGAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLVTLQR*GQGSAS
Trigger: GCTGGCACTCCCCTGACCTCACCTTTGCAAAGTTAC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCACGTGGTTCATTAAGTaGTCCCGGGAAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFTWFIK*SREEGQ
Trigger: CTGCCCCTCTTCCCGGGATCACTTAATGAACCACGT...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCTGGCTGGGCTGGATaGTTCAGGACGCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSPGWAG*FRTPQV
Trigger: TACCTGAGGCGTCCTGAAGCATCCAGCCCAGCCAGG...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAACCATGGTCCACGCCTTaGATCAGGCCAGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQPWSTP*IRPAIS
Trigger: GCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGG...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCGAATGCGGCTGCTaGCCCAGCAGATCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFSECGC*PSRSLE
Trigger: TTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGA...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGGCTCCGAATGCGGCTaGTGCCCCAGCAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQGSECG*CPSRSL
Trigger: CAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTCCCGCTGGAAGGCTCTaGTCCTCCTTCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERPAGRL*SSFEGP
Trigger: TGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGG...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTGGCTGGACCTCCAATTaGAGGCCGTCGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLAGWTSN*RPSLRA
Trigger: GGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCC...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAAGGCTGGACCTCCAATTaGAGGCCGTCGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEGWTSN*RPSLRA
Trigger: GGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCC...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACGATCAGGACGTAGGTaGCGCTCCGGCCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAERSGRR*RSGLHR
Trigger: ACGGTGCAGGCCGGAGCGGCACCTACGTCCTGATCG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCGATCAGGACGTAGGTaGCGCTCCGGCCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERARSGRR*RSGLHR
Trigger: ACGGTGCAGGCCGGAGCGGCACCTACGTCCTGATCG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTCGATCAGGACGTAGGTaGCGCTCCGGCCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATRSGRR*RSGLHR
Trigger: ACGGTGCAGGCCGGAGCGGCACCTACGTCCTGATCG...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAACCTTCGTCTGGACCATaGCGGGTCTCTGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQPSSGP*RVSGPS
Trigger: TGAGGGACCAGAGACCCGGCATGGTCCAGACGAAGG...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGCCTTCGTCTGGACCATaGCGGGTCTCTGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PPSRKWQMTSTLFLETASPSSGP*RVSGPS
Trigger: TGAGGGACCAGAGACCCGGCATGGTCCAGACGAAGG...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACTTCCCCGGCCACTCCTaGACAGTGGATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNFPGHS*TVDPPS
Trigger: GGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAA...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACACAAACGTGCCTTGTGTaGCGGGCGGCCTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTQTCLV*RAASLS
Trigger: ACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTG...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCCTCCCGGGAGGGAAATaGTCGCAGCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLLPGGK*SQPSPS
Trigger: ACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCGCGCCGTATGGGTCCTaGCGAGCACGTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGAPYGS*RARLRL
Trigger: CAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGC...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCCTGTCCTGCGCCGTATaGGTCCTGGCGAGCACGTCT +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCLSCAV*VLASTS
Trigger: AGACGTGCTCGCCAGGACCCATACGGCGCAGGACAG...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCTGAGCTCATCTGGCTaGAGCTGGCCGAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLALSSSG*SWPRVR
Trigger: GCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAG...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTCTGAGCTCATCTGGCTaGAGCTGGCCGAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATLSSSG*SWPRVR
Trigger: GCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAG...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCACGGAGGGTGGCCTTaGGGCCATCCGCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAHGGWP*GHPPVL
Trigger: GAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACACGGAGGGTGGCCTTaGGGCCATCCGCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEHGGWP*GHPPVL
Trigger: GAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTGTCTCCACGGAGGGTaGCCTTGGGGCCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLCLHGG*PWGHPP
Trigger: AGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACA...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTTGTCTCCACGGAGGGTaGCCTTGGGGCCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATCLHGG*PWGHPP
Trigger: AGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACA...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCAAGAGTCGAGACCCGTaGTCCTGCAGGAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGKSRDP*SCRRPP
Trigger: CGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTT...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCTCTTTGGAATACGTCTaGCTCTTGACGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCSLEYV*LLTFST
Trigger: AGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGA...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACTTTGTTGTCAACTGTaGCCTTCTCCACATCCTCAG +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSLCCQL*PSPHPQ
Trigger: CTGAGGATGTGGAGAAGGCCACAGTTGACAACAAAG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCACTCAGGTCGGTCTGGTaGCCGCGTGGCCATACGCTG +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATALRSVW*PRGHTL
Trigger: CAGCGTATGGCCACGCGGCCACCAGACCGACCTGAG...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACAGGCCCGTCGCTGAACTaGGATGAGACGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTGPSLN*DETLLM
Trigger: CATCAGCAGCGTCTCATCCCAGTTCAGCGACGGGCC...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCCACGAACGAGCTGTTaGGCTCCGCCTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQPRTSC*APPGRR
Trigger: GCGCCTACCAGGCGGAGCCCAACAGCTCGTTCGTGG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAACCAGGGAGCGGTTCTTaGGCACGTTCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQPGSGS*ARSPPS
Trigger: AGAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGG...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCAAAAGTCAGCCACGGTaGCGGGCAGCGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGKSQPR*RAAVPG
Trigger: CCCAGGGACCGCTGCCCGCCACCGTGGCTGACTTTT...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAAAAAGTCAGCCACGGTaGCGGGCAGCGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATAKSQPR*RAAVPG
Trigger: CCCAGGGACCGCTGCCCGCCACCGTGGCTGACTTTT...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGAAAAGTCAGCCACGGTaGCGGGCAGCGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVKSQPR*RAAVPG
Trigger: CCCAGGGACCGCTGCCCGCCACCGTGGCTGACTTTT...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGACAAGCACACTCTTCCTaGAAACCGCCTCGAACGTGC +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRQAHSS*KPPRTC
Trigger: GCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTG...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTGTGGGAAGGGCGGGATaGAGGTGCGTTTTCTACGCT +
Preference number: 4 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLVGRAG*RCVFYA
Trigger: AGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCAC...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCGAGGAGGCAGGAACTTaGGTTTGCTTTTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFEEAGT*VCFSTR
Trigger: TCGGGTCGAAAAGCAAACTCAAGTTCCTGCCTCCTC...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGGAGGAGGCAGGAACTTaGGTTTGCTTTTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHREEAGT*VCFSTR
Trigger: TCGGGTCGAAAAGCAAACTCAAGTTCCTGCCTCCTC...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGGCGGAGGCAGTAGATaGGGCCAGAGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALGGGSR*GQRPGG
Trigger: TCCTCCTGGCCTCTGGCCTCATCTACTGCCTCCGCC...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCTCCTTCAGCCTGTGCTaGGAGCTATGGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCSFSLC*ELWRRQ
Trigger: CTGCCTCCGCCATAGCTCTCAGCACAGGCTGAAGGA...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGTCCAGGAGGGACCTTaGGGAGGAAGGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLVQEGP*GGRDSS
Trigger: CGAGGAGTCCCTTCCTCCTCAAGGTCCCTCCTGGAC...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTCACTCTGCTTGGGCTaGCAGGTGTGGCTGACGGGG +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLSLCLG*QVWLTG
Trigger: CCCCGTCAGCCACACCTGTCAGCCCAAGCAGAGTGA...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCTCTTGGTCAATGAAGTaGATTGTCCTATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVCRAASLSAASFPGHSCSWSMK*IVLFLG
Trigger: CCCCAGAAATAGGACAATTCACTTCATTGACCAAGA...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGATCATCTTGGTCAATaGAGTGAATTGTCCTATTTC +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDDHLGQ*SELSYF
Trigger: GAAATAGGACAATTCACTTCATTGACCAAGATGATC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGATGTACCTCCTCTCGCTaGCAACGCTGTGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRCTSSR*QRCVLR
Trigger: CCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACA...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGACCACATAGGTCAGGATaGTCTCGGAGAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRPHRSG*SRRSGH
Trigger: ATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGG...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCATCAGCCGGCTGCCTCTaGAGGTCCTTCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAASAGCL*RSFRRV
Trigger: TACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGA...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCATCAGCTCAGCCATaGCGTCCAGCTCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEPSAQP*RPAPGH
Trigger: GTGGCCTGGAGCTGGACGGCATGGCTGAGCTGATGG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCCATCAGCTCAGCCATaGCGTCCAGCTCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLAPSAQP*RPAPGH
Trigger: GTGGCCTGGAGCTGGACGGCATGGCTGAGCTGATGG...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCACCATCAGCTCAGCCATaGCGTCCAGCTCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATAPSAQP*RPAPGH
Trigger: GTGGCCTGGAGCTGGACGGCATGGCTGAGCTGATGG...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTAGGGAAGACTCAGGGTaGTCGGACTTCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLREDSG*SDFFLS
Trigger: GGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCT...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGGCTCCGAATGCGGCTaGTGCCCCAGCAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLGSECG*CPSRSL
Trigger: CAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCC...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGCGTCAGCGAACGCACTaGTGGGCACCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALRQRTH*WAPAGG
Trigger: GCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTGACG...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCCACTTTGAAGGTCACTaGTGGTCCGAGAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFHFEGH*WSENLH
Trigger: GTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTG...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTCTGATGCGTGACGTGTaGGGGCCCTCAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERLMRDV*GPSGRS
Trigger: AGACCGACCTGAGGGCCCGCACACGTCACGCATCAG...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCTGATGCGTGACGTGTaGGGGCCCTCAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLLMRDV*GPSGRS
Trigger: AGACCGACCTGAGGGCCCGCACACGTCACGCATCAG...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACGGAACTGCGTCACGGTaGGCGTCTCGTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYGTASR*ASRWSA
Trigger: TGCAGACCAACGAGACGCGCACCGTGACGCAGTTCC...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAAACTTGTTTACTTTTCTaGGGAAGTCCAGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: PGSTQCVQVALISSPGRETCLLF*GSPGGT
Trigger: GGTCCCTCCTGGACTTCCGCAGAAAAGTAAACAAGT...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGGTGCCGCTCCGGCCTaGACCGTCACTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERGAAPA*TVTAMN
Trigger: GTTCATTGCAGTGACGGTGCAGGCCGGAGCGGCACC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPLWSLK*SRVAAI
Trigger: TATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAG...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGCTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: PPSRKWQMTSTLFLETASLWSLK*SRVAAI
Trigger: TATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAG...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACCCTTCGTCTGGACCATaGCGGGTCTCTGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNPSSGP*RVSGPS
Trigger: TGAGGGACCAGAGACCCGGCATGGTCCAGACGAAGG...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACAGGGCCCTATTACTATaGAGTTATAATAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDRALLL*SYNRRH
Trigger: GTGTCTTCTATTATAACTGCATAGTAATAGGGCCCT...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTTCCCCGGCCACTCCTaGACAGTGGATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLFPGHS*TVDPPS
Trigger: GGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAA...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAATTCCCCGGCCACTCCTaGACAGTGGATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEFPGHS*TVDPPS
Trigger: GGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAA...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGCCTCACTGAGTGCTaGCAGCTTCCCCGGCCACTC +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIGLTEC*QLPRPL
Trigger: GAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCC...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCGAGAAATGCCAAACGTaGCTTGTGTGCCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCEKCQT*LVCRAA
Trigger: GGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTC...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGTGTGATTGTCTCACTTaGCCCGAAGCTGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHRCDCLT*PEAAGR
Trigger: ACGTCCTGCAGCTTCGGGGCAAGTGAGACAATCACA...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACGTGAGGTCAGGGGAGTaGCAGCCTCAAGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYVRSGE*QPQVGT
Trigger: AGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTCCAGGCTCTACGCAGTaGGTGCAGGTCGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATPGSTQ*VQVALI
Trigger: GATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCTAAGATGGAGGAATaGTGTGGGAAGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFSKMEE*CGKGGM
Trigger: CATCCCGCCCTTCCCACAGCATTCCTCCATCTTAGA...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTAGGGCCTGGCTGGGCTaGATGCTTCAGGACGCCTCA +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLARAWLG*MLQDAS
Trigger: TGAGGCGTCCTGAAGCATCCAGCCCAGCCAGGCCCT...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGCGCCGTATGGGTCCTaGCGAGCACGTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALAPYGS*RARLRL
Trigger: CAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGC...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAAGGTCCTCGCGGAGCTaGGTCCGGGACCCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRRSSRS*VRDPGG
Trigger: CCCTCCCGGGTCCCGGACCCAGCTCCGCGAGGACCT...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGCACGGAGGGTGGCCTTaGGGCCATCCGCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALHGGWP*GHPPVL
Trigger: GAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTG...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGGGAGGCCCCCGAGTGTaGCACTCAGACGATGGACCT +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQGGPRV*HSDDGP
Trigger: AGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCC...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGGAGGCCCCCGAGTGTaGCACTCAGACGATGGACCT +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATGGPRV*HSDDGP
Trigger: AGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCC...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCATCTTTGGAATACGTCTaGCTCTTGACGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSSLEYV*LLTFST
Trigger: AGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGA...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTCTCAGGTCGGTCTGGTaGCCGCGTGGCCATACGCTG +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCILRSVW*PRGHTL
Trigger: CAGCGTATGGCCACGCGGCCACCAGACCGACCTGAG...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGGCCCGTCGCTGAACTaGGATGAGACGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAGPSLN*DETLLM
Trigger: CATCAGCAGCGTCTCATCCCAGTTCAGCGACGGGCC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCACGTTCTCCTCCCTCTaGGCCACGAACGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPTFSSL*ATNELL
Trigger: CAACAGCTCGTTCGTGGCCCAGAGGGAGGAGAACGT...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCACGTTCTCCTCCCTCTaGGCCACGAACGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSTFSSL*ATNELL
Trigger: CAACAGCTCGTTCGTGGCCCAGAGGGAGGAGAACGT...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACCCAGGGAGCGGTTCTTaGGCACGTTCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNPGSGS*ARSPPS
Trigger: AGAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGG...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCCCAGGGAGCGGTTCTTaGGCACGTTCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCPGSGS*ARSPPS
Trigger: AGAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGG...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGCGGGCAGCGGTCCCTaGGTGGCGATGTACGCGGGG +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRAGSGP*VAMYAG
Trigger: CCCCGCGTACATCGCCACCCAGGGACCGCTGCCCGC...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCAACTGCTCCTTCGTCTaGACCATGCCGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSNCSFV*TMPGLW
Trigger: CCAGAGACCCGGCATGGTCCAGACGAAGGAGCAGTT...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACAAACTGCTCCTTCGTCTaGACCATGCCGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTNCSFV*TMPGLW
Trigger: CCAGAGACCCGGCATGGTCCAGACGAAGGAGCAGTT...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGAGGCTGCCGCTCACTaGGGAAGGGCCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEEAAAH*GRALRM
Trigger: CATCCTCAAGGCCCTTCCCCAGTGAGCGGCAGCCTC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGGTCCGGGACGTGCCTaGAGGAGCCAGCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRGPGRA*RSQRGP
Trigger: AGGCCCCCGCTGGCTCCTCCAGGCACGTCCCGGACC...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGAAATGTCCCCTCTCTaGGGCCCCACAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATEMSPL*GPTGPG
Trigger: TCCCGGACCTGTGGGGCCCCAGAGAGGGGACATTTC...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAAGTCATCCTGCCACGTaGAACCTGTGCCGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQSHPAT*NLCRKA
Trigger: AGCTTTCCGGCACAGGTTTCACGTGGCAGGATGACT...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR TCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGGCAGCATAGGCACTaGGGGCCGCCATCAGATGGT +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIGQHRH*GPPSDG
Trigger: ACCATCTGATGGCGGCCCTCAGTGCCTATGCTGCCC...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCTCGCTGAGGGCCTCCTaGGCACCCGCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECSLRAS*APAGRL
Trigger: GAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGA...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAACATTGGCGCTCACTTTaGAGGTCACTGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQHWRSL*RSLLVR
Trigger: TCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATG...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCATTGGCGCTCACTTTaGAGGTCACTGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPHWRSL*RSLLVR
Trigger: TCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATG...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCCTTCAGCCTGTGCTaGGAGCTATGGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGSFSLC*ELWRRQ
Trigger: CTGCCTCCGCCATAGCTCTCAGCACAGGCTGAAGGA...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTAGCGTTGATGTAGTCTaGGTGGCTGTGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLSVDVV*VAVAVL
Trigger: GAGAACAGCCACAGCCACTCAGACTACATCAACGCT...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGACTGGGGAAGGGCCTTaGGGATGGCGTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLTGEGP*GWRSPP
Trigger: AGGAGGTGAACGCCATCCTCAAGGCCCTTCCCCAGT...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGGGGAAGGGCCTTaGGGATGGCGTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLATGEGP*GWRSPP
Trigger: AGGAGGTGAACGCCATCCTCAAGGCCCTTCCCCAGT...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCGCAGCGAGGAGCTGTaGTTGTCTCACTTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVRSEEL*LSHLPR
Trigger: TCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCG...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCGCAGCGAGGAGCTGTaGTTGTCTCACTTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQRSEEL*LSHLPR
Trigger: TCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACCGCAGCGAGGAGCTGTaGTTGTCTCACTTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINRSEEL*LSHLPR
Trigger: TCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCG...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTCGCAGCGAGGAGCTGTaGTTGTCTCACTTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATRSEEL*LSHLPR
Trigger: TCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCG...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACATTCTGGGGTAGGGGGTaGTGGCGAATCGGATACTCA +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTFWGRG*WRIGYS
Trigger: TGAGTATCCGATTCGCCATCACCCCCTACCCCAGAA...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGTGCCGCCTTCCATGTaGTCATCTTGGTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLVPPSM*SSWSMK
Trigger: CTTCATTGACCAAGATGATCACATGGAAGGCGGCAC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTGTGGGGAAGGGCCTTaGGGATGGCGTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLCGEGP*GWRSPP
Trigger: AGGAGGTGAACGCCATCCTCAAGGCCCTTCCCCACA...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648371.1
CDS-3UTR GCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTGGTTTTCGGGAGGTCTaGAAGTTCCTGGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLGFREV*KFLVHH
Trigger: GTGATGGACCAGGAACTTGCAGACCTCCCGAAAACC...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCCTGGCTGGGCTGGATaGTTCAGGACGCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAPGWAG*FRTPQV
Trigger: TACCTGAGGCGTCCTGAAGCATCCAGCCCAGCCAGG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCTGGCTGGGCTGGATaGTTCAGGACGCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEPGWAG*FRTPQV
Trigger: TACCTGAGGCGTCCTGAAGCATCCAGCCCAGCCAGG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACCTGGCTGGGCTGGATaGTTCAGGACGCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEPGWAG*FRTPQV
Trigger: TACCTGAGGCGTCCTGAAGCATCCAGCCCAGCCAGG...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTTCAGCCGGCTGCCTCTaGAGGTCCTTCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATSAGCL*RSFRRV
Trigger: TACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGA...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCCGAATGCGGCTaGTGCCCCAGCAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAGSECG*CPSRSL
Trigger: CAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCC...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTGGCTCCGAATGCGGCTaGTGCCCCAGCAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLAGSECG*CPSRSL
Trigger: CAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCC...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGCTCTCCCACACCATCTaGCAAAAGTCAGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: PPSRKWQMTSTLFLETASLSHTI*QKSATV
Trigger: CACCGTGGCTGACTTTTGGCAGATGGTGTGGGAGAG...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGGAACTGCGTCACGGTaGGCGTCTCGTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATGTASR*ASRWSA
Trigger: TGCAGACCAACGAGACGCGCACCGTGACGCAGTTCC...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCACTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAALWSLK*SRVAAI
Trigger: TATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAG...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCCTTCGTCTGGACCATaGCGGGTCTCTGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQPSSGP*RVSGPS
Trigger: TGAGGGACCAGAGACCCGGCATGGTCCAGACGAAGG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGAACGTGCTGGCTACTaGATTGTTAACACAACTTCA +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSERAGY*IVNTTS
Trigger: TGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACAAACGTGCCTTGTGTaGCGGGCGGCCTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEQTCLV*RAASLS
Trigger: ACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTG...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGGAGAAATGCCAAACGTaGCTTGTGTGCCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQEKCQT*LVCRAA
Trigger: GGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTC...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAAGAGAAATGCCAAACGTaGCTTGTGTGCCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEEKCQT*LVCRAA
Trigger: GGCCGCCCGGCACACAAGGCACGTTTGGCATTTCTC...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCGTGAGGTCAGGGGAGTaGCAGCCTCAAGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGVRSGE*QPQVGT
Trigger: AGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGGTGAGGTCAGGGGAGTaGCAGCCTCAAGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQVRSGE*QPQVGT
Trigger: AGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGTGAGGTCAGGGGAGTaGCAGCCTCAAGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATVRSGE*QPQVGT
Trigger: AGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGCCCTCTCCGAGTTaGCCTGATCTCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLQPSPS*PDLLLS
Trigger: GGAGAGAAGGAGATCAGGGCAACTCGGAGAGGGCTG...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCACAGCCCTCTCCGAGTTaGCCTGATCTCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAQPSPS*PDLLLS
Trigger: GGAGAGAAGGAGATCAGGGCAACTCGGAGAGGGCTG...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGCTCCCGGGAGGGAAATaGTCGCAGCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALLPGGK*SQPSPS
Trigger: ACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTACACAGCTGCCTCTGTaGCGCCTTCCATGTGATCAT +
Preference number: 4 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLTQLPL*RLPCDH
Trigger: ATGATCACATGGAAGGCGGCACAGAGGCAGCTGTGT...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTTGCAGCCCACACAGCTaGCTCTGTGCCGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERCSPHS*LCAAFH
Trigger: ATGGAAGGCGGCACAGAGGCAGCTGTGTGGGCTGCA...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGGGCGGGATGGAGGTaGGTTTTCTACGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCRAGWR*VFYAEP
Trigger: GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCT...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCTGTGTTTTGAGGGCCTaGCTGGGCTGGATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPCVLRA*LGWMLQ
Trigger: CTGAAGCATCCAGCCCAGCCAGGCCCTCAAAACACA...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTCTGTCCTGCGCCGTATaGGTCCTGGCGAGCACGTCT +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCILSCAV*VLASTS
Trigger: AGACGTGCTCGCCAGGACCCATACGGCGCAGGACAG...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACCCTCGAGCTACTCCATaGTCCACGCCTTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNPRATP*STPCIR
Trigger: CCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGG...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCTGCACTCCGTCATCTaGAAAGCTGTCTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSLHSVI*KAVSTE
Trigger: CTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAG...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACGAGGGCCCAGGCATCTaGTTTTGGAGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYEGPGI*FWSSPN
Trigger: GTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTC...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGGCCCGTCGCTGAACTaGGATGAGACGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEGPSLN*DETLLM
Trigger: CATCAGCAGCGTCTCATCCCAGTTCAGCGACGGGCC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGGGCCCGTCGCTGAACTaGGATGAGACGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVGPSLN*DETLLM
Trigger: CATCAGCAGCGTCTCATCCCAGTTCAGCGACGGGCC...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACACGTTCTCCTCCCTCTaGGCCACGAACGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNTFSSL*ATNELL
Trigger: CAACAGCTCGTTCGTGGCCCAGAGGGAGGAGAACGT...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCAGATGTGGTAGAGATTaGAGCCTTCATCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFRCGRD*SLHPAS
Trigger: ACTGGCCGGATGAAGGCTCCAATCTCTACCACATCT...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACAACTGCTCCTTCGTCTaGACCATGCCGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYNCSFV*TMPGLW
Trigger: CCAGAGACCCGGCATGGTCCAGACGAAGGAGCAGTT...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGCAAGCACACTCTTCCTaGAAACCGCCTCGAACGTGC +
Preference number: 4 (lower is better)
Translates to: PPSRKWQMTSTLFLETASQAHSS*KPPRTC
Trigger: GCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTG...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGTGGGCACTACTCATaGGGTGCACAGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCSGHYS*GAQVSA
Trigger: GGCAGACACCTGTGCACCCCATGAGTAGTGCCCACT...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGTGCCAGCCTCAAGTaGGCACTACTCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCSASLK*ALLMGC
Trigger: GCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACT...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGAAATGTCCCCTCTCTaGGGCCCCACAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALEMSPL*GPTGPG
Trigger: TCCCGGACCTGTGGGGCCCCAGAGAGGGGACATTTC...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCAGGGCCGGTCGGCTaGTTTCTCACTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERAGPVG*FLTSLP
Trigger: TGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGTCATCCTGCCACGTaGAACCTGTGCCGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCSHPAT*NLCRKA
Trigger: AGCTTTCCGGCACAGGTTTCACGTGGCAGGATGACT...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR TCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTAGGCCTGGGCATTCTTaGGGGTGCACGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATRPGHS*GCTQKV
Trigger: TACCTTCTGCGTGCACCCTCAAGAATGCCCAGGCCT...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTAGGCCTGGGCATTCTTaGGGGTGCACGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLARPGHS*GCTQKV
Trigger: TACCTTCTGCGTGCACCCTCAAGAATGCCCAGGCCT...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACAATACGTCTGGCTCTTaGCGTTCTCCACTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNNTSGS*RSPLRQ
Trigger: CTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATT...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAAATACGTCTGGCTCTTaGCGTTCTCCACTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAANTSGS*RSPLRQ
Trigger: CTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATT...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCATCTTCTTGCTCCGCCTaGGGAGGCAGGAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAASSCSA*GGRNLS
Trigger: ACTCAAGTTCCTGCCTCCTCAGGCGGAGCAAGAAGA...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGTCAGATCATGATTCCTaGCAACATCCGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPSRKWQMTSTLFLETASSDHDS*QHPWGG
Trigger: CCCACCCCACGGATGTTGTCAGGAATCATGATCTGA...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCCCCGAAAGTGGCAGATaGCAAGCACACTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCPESGR*QAHSSW
Trigger: CCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGG...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCCCCGAAAGTGGCAGATaGCAAGCACACTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLPESGR*QAHSSW
Trigger: CCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGG...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTAACTTTGCAAAGGTaGGGTCAGGGGAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNVTLQR*GQGSAS
Trigger: GCTGGCACTCCCCTGACCTCACCTTTGCAAAGTTAC...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGACGTGGTTCATTAAGTaGTCCCGGGAAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLTWFIK*SREEGQ
Trigger: CTGCCCCTCTTCCCGGGATCACTTAATGAACCACGT...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCCTTCAACCAAGAAGGTaGACGGGTGTGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGLQPRR*TGVGKG
Trigger: GCCCTTCCCCACACCCGTTCACCTTCTTGGTTGAAG...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648371.1
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAAGGGAAGACTCAGGGTaGTCGGACTTCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAREDSG*SDFFLS
Trigger: GGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCT...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCCCCGCTGGAAGGCTCTaGTCCTCCTTCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECPAGRL*SSFEGP
Trigger: TGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGG...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACTTTGAAGGTCACTaGTGGTCCGAGAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPHFEGH*WSENLH
Trigger: GTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTG...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCCGATCAGGACGTAGGTaGCGCTCCGGCCTGCACCGT +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECRSGRR*RSGLHR
Trigger: ACGGTGCAGGCCGGAGCGGCACCTACGTCCTGATCG...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCCTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGLWSLK*SRVAAI
Trigger: TATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAG...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACCACTTGCCCCGAAGCTaGAGGACGTTCAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYHLPRS*RTFSSV
Trigger: GACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTG...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACATGTGATTGTCTCACTTaGCCCGAAGCTGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTCDCLT*PEAAGR
Trigger: ACGTCCTGCAGCTTCGGGGCAAGTGAGACAATCACA...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGGGACCCTCATAGCTTaGTCAATGCCCAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRGTLIA*SMPRFV
Trigger: AACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTCAGCCCTCTCCGAGTTaGCCTGATCTCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERQPSPS*PDLLLS
Trigger: GGAGAGAAGGAGATCAGGGCAACTCGGAGAGGGCTG...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCACACAGCTGCCTCTGTaGCGCCTTCCATGTGATCAT +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPTQLPL*RLPCDH
Trigger: ATGATCACATGGAAGGCGGCACAGAGGCAGCTGTGT...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAAGGGCGGGATGGAGGTaGGTTTTCTACGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAERAGWR*VFYAEP
Trigger: GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCT...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTCCTCGAGCTACTCCATaGTCCACGCCTTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATPRATP*STPCIR
Trigger: CCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGG...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTCCAGGCATCTGGTTTTaGAGCTCCCCAAACGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERPGIWF*SSPNAA
Trigger: CGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGG...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATCTTCCTCGGAAGGCTaGACCTCCAATTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATASSSEG*TSNCRP
Trigger: CGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGA...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATTTGAAGGTCACTGCTaGTCCGAGAACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQFEGHC*SENLHV
Trigger: GACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAA...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACGTTCTCCTCCCTCTaGGCCACGAACGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLATFSSL*ATNELL
Trigger: CAACAGCTCGTTCGTGGCCCAGAGGGAGGAGAACGT...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTACGTTCTCCTCCCTCTaGGCCACGAACGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERTFSSL*ATNELL
Trigger: CAACAGCTCGTTCGTGGCCCAGAGGGAGGAGAACGT...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCTACCAACTCAGGAAGTaGAACTGCGTCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCYQLRK*NCVTVR
Trigger: GCGCACCGTGACGCAGTTCCACTTCCTGAGTTGGTA...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTAACTGCTCCTTCGTCTaGACCATGCCGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERNCSFV*TMPGLW
Trigger: CCAGAGACCCGGCATGGTCCAGACGAAGGAGCAGTT...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAAGCACACTCTTCCTaGAAACCGCCTCGAACGTGC +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLQAHSS*KPPRTC
Trigger: GCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTG...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGGCCACTCCTGCACAGTaGATCCACCCTCCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQATPAQ*IHPPES
Trigger: ACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGC...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTAGTGGGCACTACTCATaGGGTGCACAGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLASGHYS*GAQVSA
Trigger: GGCAGACACCTGTGCACCCCATGAGTAGTGCCCACT...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGCAGGGCCGGTCGGCTaGTTTCTCACTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIAGPVG*FLTSLP
Trigger: TGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGC...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGTGGGAAGGGCGGGATaGAGGTGCGTTTTCTACGCT +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEVGRAG*RCVFYA
Trigger: AGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCAC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGGAAGGTGAACGGGTGTaGGGAAGGGCCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVEGERV*GRALRM
Trigger: CATCCTCAAGGCCCTTCCCCACACCCGTTCACCTTC...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648371.1
3UTR CAA 72 bp TGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTaGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: WQGSCAPGDPHS*LNAQICSSWLW
Trigger: CCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCGCCAACGCTGTGTTTTaGGGGCCTGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECANAVF*GPGWAG
Trigger: TCCAGCCCAGCCAGGCCCTCAAAACACAGCGTTGGC...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTTCCTTCAGGAGGGTATaGATCCGTGCTCCATCGCCT +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERSFRRV*IRAPSP
Trigger: AGGCGATGGAGCACGGATTCATACCCTCCTGAAGGA...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGGGCAGTCTCCTCTTCTaGAGACAGGGAAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVGSLLF*RQGRLR
Trigger: CCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCC...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGGCAGTCTCCTCTTCTaGAGACAGGGAAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATAGSLLF*RQGRLR
Trigger: CCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCC...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAAATACGTCTGGCTCTTaGCGTTCTCCACTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAENTSGS*RSPLRQ
Trigger: CTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATT...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGAATACGTCTGGCTCTTaGCGTTCTCCACTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQNTSGS*RSPLRQ
Trigger: CTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATT...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTATTGCAGGCCGTCGCTaGGGGCCTCCTGAGCACCCG +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSIAGRR*GPPEHP
Trigger: CGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAAT...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCATTGGCGCTCACTTTaGAGGTCACTGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLHWRSL*RSLLVR
Trigger: TCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATG...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCAGCGTTGATGTAGTCTaGGTGGCTGTGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLSVDVV*VAVAVL
Trigger: GAGAACAGCCACAGCCACTCAGACTACATCAACGCT...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACAGCGTTGATGTAGTCTaGGTGGCTGTGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYSVDVV*VAVAVL
Trigger: GAGAACAGCCACAGCCACTCAGACTACATCAACGCT...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGATTAAAGTCAGATCATaGTTCCTGACAACATCCGTG +
Preference number: 4 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRIKVRS*FLTTSV
Trigger: CACGGATGTTGTCAGGAATCATGATCTGACTTTAAT...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCCCGAAAGTGGCAGATaGCAAGCACACTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAPESGR*QAHSSW
Trigger: CCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTTTCTGGGGTAGGGGGTaGTGGCGAATCGGATACTCA +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERFWGRG*WRIGYS
Trigger: TGAGTATCCGATTCGCCATCACCCCCTACCCCAGAA...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGATCATCTTGGTCAATaGAGTGAATTGTCCTATTTC +
Preference number: 4 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSDHLGQ*SELSYF
Trigger: GAAATAGGACAATTCACTTCATTGACCAAGATGATC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGGTGCGTTTTCTACGCTaGACCCCACACAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: PPSRKWQMTSTLFLETASVRFLR*TPHRKS
Trigger: AGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCAC...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGGGTTTTCGGGAGGTCTaGAAGTTCCTGGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLGFREV*KFLVHH
Trigger: GTGATGGACCAGGAACTTGCAGACCTCCCGAAAACC...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAGGTTTTCGGGAGGTCTaGAAGTTCCTGGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAGFREV*KFLVHH
Trigger: GTGATGGACCAGGAACTTGCAGACCTCCCGAAAACC...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACGGTTTTCGGGAGGTCTaGAAGTTCCTGGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYGFREV*KFLVHH
Trigger: GTGATGGACCAGGAACTTGCAGACCTCCCGAAAACC...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCATGTACCTCCTCTCGCTaGCAACGCTGTGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAACTSSR*QRCVLR
Trigger: CCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACA...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCTATCATCGTCGTCCTaGACTCCGTCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSLSSSS*TPSSGK
Trigger: CTTTCCAGATGACGGAGTGCAGGACGACGATGATAG...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCGAGACCCGTGGTCCTaGAGGAGGCCCCCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSRDPWS*RRPPSV
Trigger: CACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCG...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCAGGGAAGACTCAGGGTaGTCGGACTTCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGREDSG*SDFFLS
Trigger: GGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCT...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAATCCGAATGCGGCTGCTaGCCCAGCAGATCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLESECGC*PSRSLE
Trigger: TTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGA...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATCCGAATGCGGCTGCTaGCCCAGCAGATCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATASECGC*PSRSLE
Trigger: TTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGA...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGGCTGGACCTCCAATTaGAGGCCGTCGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRGWTSN*RPSLRA
Trigger: GGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCC...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCCTGATGCGTGACGTGTaGGGGCCCTCAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECLMRDV*GPSGRS
Trigger: AGACCGACCTGAGGGCCCGCACACGTCACGCATCAG...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTACCAGGATGAGGCGCTaGTGCGTGCGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSTRMRR*CVRRGW
Trigger: CCAGCCCCTCCGCACGCAGCAGCGCCTCATCCTGGT...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCTCTCCCACACCATCTaGCAAAAGTCAGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQLSHTI*QKSATV
Trigger: CACCGTGGCTGACTTTTGGCAGATGGTGTGGGAGAG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCTCTCCCACACCATCTaGCAAAAGTCAGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLLSHTI*QKSATV
Trigger: CACCGTGGCTGACTTTTGGCAGATGGTGTGGGAGAG...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTGGCCTCACTGAGTGCTaGCAGCTTCCCCGGCCACTC +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICGLTEC*QLPRPL
Trigger: GAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCC...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATGTGTTTTGAGGGCCTaGCTGGGCTGGATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATACVLRA*LGWMLQ
Trigger: CTGAAGCATCCAGCCCAGCCAGGCCCTCAAAACACA...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTTGTGTTTTGAGGGCCTaGCTGGGCTGGATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATCVLRA*LGWMLQ
Trigger: CTGAAGCATCCAGCCCAGCCAGGCCCTCAAAACACA...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGCTCCATCGCCTGTGCTaGAGGGGTCTTCGGAATCTC +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALLHRLC*RGLRNL
Trigger: GAGATTCCGAAGACCCCTCCAGCACAGGCGATGGAG...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACCTGCACTCCGTCATCTaGAAAGCTGTCTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINLHSVI*KAVSTE
Trigger: CTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAG...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCCTGCACTCCGTCATCTaGAAAGCTGTCTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGLHSVI*KAVSTE
Trigger: CTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAG...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCCTGGTAGGCGGCAGTaGCATCTGCACCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICPGRRQ*HLHLGR
Trigger: GCGACCCAGGTGCAGATGCCACTGCCGCCTACCAGG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCTCAGGTCGGTCTGGTaGCCGCGTGGCCATACGCTG +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICLRSVW*PRGHTL
Trigger: CAGCGTATGGCCACGCGGCCACCAGACCGACCTGAG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCAGATGTGGTAGAGATTaGAGCCTTCATCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPRCGRD*SLHPAS
Trigger: ACTGGCCGGATGAAGGCTCCAATCTCTACCACATCT...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAATACCAACTCAGGAAGTaGAACTGCGTCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEYQLRK*NCVTVR
Trigger: GCGCACCGTGACGCAGTTCCACTTCCTGAGTTGGTA...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAATACCAACTCAGGAAGTaGAACTGCGTCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEYQLRK*NCVTVR
Trigger: GCGCACCGTGACGCAGTTCCACTTCCTGAGTTGGTA...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTTACCAACTCAGGAAGTaGAACTGCGTCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATYQLRK*NCVTVR
Trigger: GCGCACCGTGACGCAGTTCCACTTCCTGAGTTGGTA...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCGAGGCTGCCGCTCACTaGGGAAGGGCCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECEAAAH*GRALRM
Trigger: CATCCTCAAGGCCCTTCCCCAGTGAGCGGCAGCCTC...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCAAGCACACTCTTCCTaGAAACCGCCTCGAACGTGC +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAQAHSS*KPPRTC
Trigger: GCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCAAGCACACTCTTCCTaGAAACCGCCTCGAACGTGC +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQQAHSS*KPPRTC
Trigger: GCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCCACCCTCCCGAAAGTaGCAGATGACAAGCACACTC +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAPPSRK*QMTSTL
Trigger: GAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCCACCCTCCCGAAAGTaGCAGATGACAAGCACACTC +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLPPSRK*QMTSTL
Trigger: GAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTCCACCCTCCCGAAAGTaGCAGATGACAAGCACACTC +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERPPSRK*QMTSTL
Trigger: GAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCCACCCTCCCGAAAGTaGCAGATGACAAGCACACTC +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVPPSRK*QMTSTL
Trigger: GAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTTCCTTCAGGAGGGTATaGATCCGTGCTCCATCGCCT +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCISFRRV*IRAPSP
Trigger: AGGCGATGGAGCACGGATTCATACCCTCCTGAAGGA...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGTCCTTCAGGAGGGTATaGATCCGTGCTCCATCGCCT +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALSFRRV*IRAPSP
Trigger: AGGCGATGGAGCACGGATTCATACCCTCCTGAAGGA...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTCATTGGCGCTCACTTTaGAGGTCACTGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIHWRSL*RSLLVR
Trigger: TCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATG...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACGACCCGACTCCGGTTTaGAGAATTTTCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYDPTPV*RIFSPE
Trigger: CTCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTC...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGAGGAGGCAGGAACTTaGGTTTGCTTTTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLEREEAGT*VCFSTR
Trigger: TCGGGTCGAAAAGCAAACTCAAGTTCCTGCCTCCTC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTTCTTCTTGCTCCGCCTaGGGAGGCAGGAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCISSCSA*GGRNLS
Trigger: ACTCAAGTTCCTGCCTCCTCAGGCGGAGCAAGAAGA...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACAGCGTTGATGTAGTCTaGGTGGCTGTGGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINSVDVV*VAVAVL
Trigger: GAGAACAGCCACAGCCACTCAGACTACATCAACGCT...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGCACCGTCACTGCAATaGACAATTATTGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRAPSLQ*TIIGQE
Trigger: TTCTTGTCCAATAATTGTTCATTGCAGTGACGGTGC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAATCAGATCATGATTCCTaGCAACATCCGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLESDHDS*QHPWGG
Trigger: CCCACCCCACGGATGTTGTCAGGAATCATGATCTGA...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGTGCCGCCTTCCATGTaGTCATCTTGGTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLVPPSM*SSWSMK
Trigger: CTTCATTGACCAAGATGATCACATGGAAGGCGGCAC...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCGTGCCGCCTTCCATGTaGTCATCTTGGTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCVPPSM*SSWSMK
Trigger: CTTCATTGACCAAGATGATCACATGGAAGGCGGCAC...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCGGTAAAAGTCCATTaGCGGAACCTTCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERAVKVH*RNLLAP
Trigger: AGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR GCA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACGCGGTAAAAGTCCATTaGCGGAACCTTCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINAVKVH*RNLLAP
Trigger: AGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGC...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCCACATAGGTCAGGATaGTCTCGGAGAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQPHRSG*SRRSGH
Trigger: ATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGACCGCTCTCCCAGGGCTaGCTCGAGCTACTCCATGGT +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRPLSQG*LELLHG
Trigger: ACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGG...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCACTATCATCGTCGTCCTaGACTCCGTCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAALSSSS*TPSSGK
Trigger: CTTTCCAGATGACGGAGTGCAGGACGACGATGATAG...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCACACTTTGAAGGTCACTaGTGGTCCGAGAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATAHFEGH*WSENLH
Trigger: GTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTG...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCTGATGCGTGACGTGTaGGGGCCCTCAGGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICLMRDV*GPSGRS
Trigger: AGACCGACCTGAGGGCCCGCACACGTCACGCATCAG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTGGTGCCGCTCCGGCCTaGACCGTCACTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICGAAPA*TVTAMN
Trigger: GTTCATTGCAGTGACGGTGCAGGCCGGAGCGGCACC...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGGTGCTCCAGGGTCGCTaGGATATCAATCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLVLQGR*DINLFS
Trigger: GCTAAAGAGATTGATATCGCAGCGACCCTGGAGCAC...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGATTCCCCGGCCACTCCTaGACAGTGGATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRFPGHS*TVDPPS
Trigger: GGAGGGTGGATCCACTGTGCAGGAGTGGCCGGGGAA...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGGGACCCTCATAGCTTaGTCAATGCCCAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQGTLIA*SMPRFV
Trigger: AACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCCAGGCTCTACGCAGTaGGTGCAGGTCGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICPGSTQ*VQVALI
Trigger: GATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTACACAGCTGCCTCTGTaGCGCCTTCCATGTGATCAT +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATTQLPL*RLPCDH
Trigger: ATGATCACATGGAAGGCGGCACAGAGGCAGCTGTGT...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTTCTAAGATGGAGGAATaGTGTGGGAAGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERSKMEE*CGKGGM
Trigger: CATCCCGCCCTTCCCACAGCATTCCTCCATCTTAGA...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCCACTTTGAAGGTCACTaGTGGTCCGAGAACCTCTCT +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCHFEGH*WSENLS
Trigger: AGAGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTG...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS-3UTR CCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAATTGCCGGAACCTTCTaGCACCTTCCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAIAGTF*HLPNTP
Trigger: TGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAAT...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR CCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGATTGCCGGAACCTTCTaGCACCTTCCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLIAGTF*HLPNTP
Trigger: TGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAAT...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR CCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAACTTTGTTGTCAACTGTaGCCTTCTCCACATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQLCCQL*PSPHPQ
Trigger: CTGAGGATGTGGAGAAGGCCACAGTTGACAACAAAG...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCCTGGTAGGCGGCAGTaGCATCTGCACCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSPGRRQ*HLHLGR
Trigger: GCGACCCAGGTGCAGATGCCACTGCCGCCTACCAGG...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCCACGAACGAGCTGTTaGGCTCCGCCTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSPRTSC*APPGRR
Trigger: GCGCCTACCAGGCGGAGCCCAACAGCTCGTTCGTGG...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGATGTGGTAGAGATTaGAGCCTTCATCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCRCGRD*SLHPAS
Trigger: ACTGGCCGGATGAAGGCTCCAATCTCTACCACATCT...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACGACCCGACTCCGGTTTaGAGAATTTTCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINDPTPV*RIFSPE
Trigger: CTCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTC...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGAGGAGGCAGGAACTTaGGTTTGCTTTTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIEEAGT*VCFSTR
Trigger: TCGGGTCGAAAAGCAAACTCAAGTTCCTGCCTCCTC...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCCTTTGGCCATCTTGTTaGGAACCATGTCGATCAGGA +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLLWPSC*EPCRSG
Trigger: TCCTGATCGACATGGTTCTCAACAAGATGGCCAAAG...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTTCTTGGTCAATGAAGTaGATTGTCCTATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLSWSMK*IVLFLG
Trigger: CCCCAGAAATAGGACAATTCACTTCATTGACCAAGA...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTGTGCCGCCTTCCATGTaGTCATCTTGGTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLAVPPSM*SSWSMK
Trigger: CTTCATTGACCAAGATGATCACATGGAAGGCGGCAC...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGGTGCGTTTTCTACGCTaGACCCCACACAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVVRFLR*TPHRKS
Trigger: AGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCAC...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGTGCGTTTTCTACGCTaGACCCCACACAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: LPKVADDKHTLPGNRLERVRFLR*TPHRKS
Trigger: AGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCAC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTTCAGCCGGCTGCCTCTaGAGGTCCTTCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICSAGCL*RSFRRV
Trigger: TACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGA...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCCATGGTCCACGCCTTaGATCAGGCCAGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICPWSTP*IRPAIS
Trigger: GCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACTATCATCGTCGTCCTaGACTCCGTCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAELSSSS*TPSSGK
Trigger: CTTTCCAGATGACGGAGTGCAGGACGACGATGATAG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACACTTGTTTACTTTTCTaGGGAAGTCCAGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNTCLLF*GSPGGT
Trigger: GGTCCCTCCTGGACTTCCGCAGAAAAGTAAACAAGT...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGGTGCTCCAGGGTCGCTaGGATATCAATCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQVLQGR*DINLFS
Trigger: GCTAAAGAGATTGATATCGCAGCGACCCTGGAGCAC...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCGTGCTCCAGGGTCGCTaGGATATCAATCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGVLQGR*DINLFS
Trigger: GCTAAAGAGATTGATATCGCAGCGACCCTGGAGCAC...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCAAACGTGCCTTGTGTaGCGGGCGGCCTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICQTCLV*RAASLS
Trigger: ACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTTGTGATTGTCTCACTTaGCCCGAAGCTGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCICDCLT*PEAAGR
Trigger: ACGTCCTGCAGCTTCGGGGCAAGTGAGACAATCACA...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCATCTCAATGTTGGGGTaGATCTGTAACTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSREGNARSPLRVALISFISMLG*ICNFAK
Trigger: CTTTGCAAAGTTACAGATGCACCCCAACATTGAGAT...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTATTGCCGGAACCTTCTaGCACCTTCCAAACACTCCA +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATIAGTF*HLPNTP
Trigger: TGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAAT...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR CCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCCTCCATCGCCTGTGCTaGAGGGGTCTTCGGAATCTC +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECLHRLC*RGLRNL
Trigger: GAGATTCCGAAGACCCCTCCAGCACAGGCGATGGAG...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTTTTGAAGGTCACTGCTaGTCCGAGAACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIFEGHC*SENLHV
Trigger: GACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAA...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCTCAGTGGTCACGTTTTaGACATTGGCGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: STLPKVADDKHTLPGNRLSVVTF*TLALTL
Trigger: CAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGA...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAAAGATGTGGTAGAGATTaGAGCCTTCATCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLERCGRD*SLHPAS
Trigger: ACTGGCCGGATGAAGGCTCCAATCTCTACCACATCT...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GTGAGGTCAGGGGAGTGCCAGCCTCAAGTGGGCACTACTCATGGGGTGCACAGGAACACATCTCAATGTTaGGGTGCATCTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: VRSGECQPQVGTTHGVHRNTSQC*GASVTL
Trigger: CAAAGTTACAGATGCACCCCAACATTGAGATGTGTT...CCTGTGCACCCCATGAGTAGTGCCCACTTGAGGCTGGCACTCCCCTGACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAAACACATCTCAATGTTaGGGTGCATCTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRNTSQC*GASVTL
Trigger: CAAAGTTACAGATGCACCCCAACATTGAGATGTGTT...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAACCATCTATCTAAGATaGAGGAATGCTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQTIYLR*RNAVGR
Trigger: CCTTCCCACAGCATTCCTCCATCTTAGATAGATGGT...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTTTTGAAGGTCACTGCTaGTCCGAGAACCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLAFEGHC*SENLSV
Trigger: GACAGAGAGGTTCTCGGACCAGCAGTGACCTTCAAA...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS-3UTR TCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCAGACGCTGCTGATGCGTaGCGTGTGCGGGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSDAADA*RVRALR
Trigger: CCTGAGGGCCCGCACACGTCACGCATCAGCAGCGTC...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCGCACCGTCACTGCAATaGACAATTATTGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPAPSLQ*TIIGQE
Trigger: TTCTTGTCCAATAATTGTTCATTGCAGTGACGGTGC...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCTTCAACCAAGAAGGTaGACGGGTGCTTTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSLQPRR*TGALRK
Trigger: TTTTCTTAAAGCACCCGTTCACCTTCTTGGTTGAAG...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGTGCGTTTTCTACGCTaGACCCCACACAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIVRFLR*TPHRKS
Trigger: AGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCAC...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTGTGCTCCATCGCCTGTaGTGGAGGGGTCTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICVLHRL*WRGLRN
Trigger: ATTCCGAAGACCCCTCCAGCACAGGCGATGGAGCAC...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCACTTGTTTACTTTTCTaGGGAAGTCCAGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGTCLLF*GSPGGT
Trigger: GGTCCCTCCTGGACTTCCGCAGAAAAGTAAACAAGT...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTACTTGTTTACTTTTCTaGGGAAGTCCAGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERATCLLF*GSPGGT
Trigger: GGTCCCTCCTGGACTTCCGCAGAAAAGTAAACAAGT...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCATCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAASLKEK*QTCLVC
Trigger: GCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGA...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGGGACCCTCATAGCTTaGTCAATGCCCAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLGTLIA*SMPRFV
Trigger: AACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCC...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCCTCGAGCTACTCCATaGTCCACGCCTTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICPRATP*STPCIR
Trigger: CCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCTCTTTGGAATACGTCTaGCTCTTGACGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCSLEYV*LLTFST
Trigger: AGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGA...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGTCAGTGGTCACGTTTTaGACATTGGCGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVSVVTF*TLALTL
Trigger: CAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGA...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCAGTGGTCACGTTTTaGACATTGGCGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINSVVTF*TLALTL
Trigger: CAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGA...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCTTTGTTGTCAACTGTaGCCTTCTCCACATCCTCAG +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLALCCQL*PSPHPQ
Trigger: CTGAGGATGTGGAGAAGGCCACAGTTGACAACAAAG...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCTACCAACTCAGGAAGTaGAACTGCGTCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECYQLRK*NCVTVR
Trigger: GCGCACCGTGACGCAGTTCCACTTCCTGAGTTGGTA...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCGCAATGAACAATTATTaGACAAGAACGGCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPAMNNY*TRTAPV
Trigger: TACAGGGGCCGTTCTTGTCCAATAATTGTTCATTGC...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGCAATGAACAATTATTaGACAAGAACGGCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQAMNNY*TRTAPV
Trigger: TACAGGGGCCGTTCTTGTCCAATAATTGTTCATTGC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACACCATCTATCTAAGATaGAGGAATGCTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNTIYLR*RNAVGR
Trigger: CCTTCCCACAGCATTCCTCCATCTTAGATAGATGGT...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGACCATCTATCTAAGATaGAGGAATGCTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLTIYLR*RNAVGR
Trigger: CCTTCCCACAGCATTCCTCCATCTTAGATAGATGGT...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGGCAGTCTCCTCTTCTaGAGACAGGGAAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRGSLLF*RQGRLR
Trigger: CCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCC...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGGCACCGTCACTGCAATaGACAATTATTGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLAPSLQ*TIIGQE
Trigger: TTCTTGTCCAATAATTGTTCATTGCAGTGACGGTGC...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGCCGGGCGGCCTCACTaGGTGCTGCCAGCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFAGRPH*VLPASP
Trigger: CGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTACGTGGTTCATTAAGTaGTCCCGGGAAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICTWFIK*SREEGQ
Trigger: CTGCCCCTCTTCCCGGGATCACTTAATGAACCACGT...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCGTGCTTAGGTTTACATaGTGTCAAAACACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCVLRFT*CQNTWF
Trigger: GAACCACGTGTTTTGACATCATGTAAACCTAAGCAC...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCATCTTGGTCAATGAAGTaGATTGTCCTATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VDGDAARSCDCLTCPEAASWSMK*IVLFLG
Trigger: CCCCAGAAATAGGACAATTCACTTCATTGACCAAGA...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCCCACATAGGTCAGGATaGTCTCGGAGAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECPHRSG*SRRSGH
Trigger: ATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGG...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTAGGGAAGACTCAGGGTaGTCGGACTTCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICREDSG*SDFFLS
Trigger: GGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCT...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGCACTGCTGGGCACCTaGAGGAGGCGGGCGACGTCC +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDALLGT*RRRATS
Trigger: GGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINSLKEK*QTCLVC
Trigger: GCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGA...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAATCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLESLKEK*QTCLVC
Trigger: GCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGA...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATCTCTCAAAGAGAAATaGCAAACGTGCCTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATASLKEK*QTCLVC
Trigger: GCACACAAGGCACGTTTGGCATTTCTCTTTGAGAGA...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAATCTCAATGTTGGGGTaGATCTGTAACTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQISMLG*ICNFAK
Trigger: CTTTGCAAAGTTACAGATGCACCCCAACATTGAGAT...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGGGACCCTCATAGCTTaGTCAATGCCCAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALGTLIA*SMPRFV
Trigger: AACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCC...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTAGGGCGGGATGGAGGTaGGTTTTCTACGCTGAACCC +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSRAGWR*VFYAEP
Trigger: GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCT...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCTCCATCGCCTGTGCTaGAGGGGTCTTCGGAATCTC +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSLHRLC*RGLRNL
Trigger: GAGATTCCGAAGACCCCTCCAGCACAGGCGATGGAG...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCAAAGAGTCGAGACCCGTaGTCCTGCAGGAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSKSRDP*SCRRPP
Trigger: CGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTT...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCTTTGAAGGTCACTGCTaGTCCGAGAACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECFEGHC*SENLHV
Trigger: GACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAA...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCCCCTCCACCCGTAACTaGATTTTTCCACAAATCTCT +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGPSTRN*IFPQIS
Trigger: AGAGATTTGTGGAAAAATCCAGTTACGGGTGGAGGG...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCCCTCCACCCGTAACTaGATTTTTCCACAAATCTCT +
Preference number: 4 (lower is better)
Translates to: PKVADDKHTLPGNRLERAPSTRN*IFPQIS
Trigger: AGAGATTTGTGGAAAAATCCAGTTACGGGTGGAGGG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAACCATCTATCTAAGATaGAGGAATGCTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATATIYLR*RNAVGR
Trigger: CCTTCCCACAGCATTCCTCCATCTTAGATAGATGGT...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTAGTCATCCTGCCACGTaGAACCTGTGCCGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSSHPAT*NLCRKA
Trigger: AGCTTTCCGGCACAGGTTTCACGTGGCAGGATGACT...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR TCA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCACCGTCACTGCAATaGACAATTATTGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: WQMTSTLFLETASNVLATAPSLQ*TIIGQE
Trigger: TTCTTGTCCAATAATTGTTCATTGCAGTGACGGTGC...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAAGCACCGTCACTGCAATaGACAATTATTGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEAPSLQ*TIIGQE
Trigger: TTCTTGTCCAATAATTGTTCATTGCAGTGACGGTGC...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR TCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACATTAAAGTCAGATCATaGTTCCTGACAACATCCGTG +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNIKVRS*FLTTSV
Trigger: CACGGATGTTGTCAGGAATCATGATCTGACTTTAAT...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCGTGCTTAGGTTTACATaGTGTCAAAACACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGVLRFT*CQNTWF
Trigger: GAACCACGTGTTTTGACATCATGTAAACCTAAGCAC...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGTGCTTAGGTTTACATaGTGTCAAAACACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLVLRFT*CQNTWF
Trigger: GAACCACGTGTTTTGACATCATGTAAACCTAAGCAC...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAATCTTGGTCAATGAAGTaGATTGTCCTATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAESWSMK*IVLFLG
Trigger: CCCCAGAAATAGGACAATTCACTTCATTGACCAAGA...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTTGTACCTCCTCTCGCTaGCAACGCTGTGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICCTSSR*QRCVLR
Trigger: CCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACA...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGCCCCGGGCTCCGAATaGGGCTGCTGCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFAPGSE*GCCPSR
Trigger: TCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCAGGGCCCTATTACTATaGAGTTATAATAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: GRDGGAFSTLNPTQEICSRALLL*SYNRRH
Trigger: GTGTCTTCTATTATAACTGCATAGTAATAGGGCCCT...GCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGAACGTGCTGGCTACTaGATTGTTAACACAACTTCA +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLERAGY*IVNTTS
Trigger: TGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTC...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACATCTCAATGTTGGGGTaGATCTGTAACTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PSRKWQMTSTLFLETASNISMLG*ICNFAK
Trigger: CTTTGCAAAGTTACAGATGCACCCCAACATTGAGAT...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCCGAATCATCTCTACGTaGTTAGGTTTACATGATGTC +
Preference number: 4 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCRIIST*LGLHDV
Trigger: GACATCATGTAAACCTAAGCACGTAGAGATGATTCG...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCTGCACTCCGTCATCTaGAAAGCTGTCTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSLHSVI*KAVSTE
Trigger: CTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAG...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCAGATGTGGTAGAGATTaGAGCCTTCATCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECRCGRD*SLHPAS
Trigger: ACTGGCCGGATGAAGGCTCCAATCTCTACCACATCT...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGGCAATGAACAATTATTaGACAAGAACGGCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SRKWQMTSTLFLETASNVAMNNY*TRTAPV
Trigger: TACAGGGGCCGTTCTTGTCCAATAATTGTTCATTGC...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCAGCAATGAACAATTATTaGACAAGAACGGCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: QMTSTLFLETASNVLATAAMNNY*TRTAPV
Trigger: TACAGGGGCCGTTCTTGTCCAATAATTGTTCATTGC...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CCA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACAACACATCTCAATGTTaGGGTGCATCTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: VADDKHTLPGNRLERAGYNTSQC*GASVTL
Trigger: CAAAGTTACAGATGCACCCCAACATTGAGATGTGTT...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGACCCGACTCCGGTTTaGAGAATTTTCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRDPTPV*RIFSPE
Trigger: CTCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTC...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGATTAAAGTCAGATCATaGTTCCTGACAACATCCGTG +
Preference number: 4 (lower is better)
Translates to: RKWQMTSTLFLETASNVLIKVRS*FLTTSV
Trigger: CACGGATGTTGTCAGGAATCATGATCTGACTTTAAT...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTTGTACCTCCTCTCGCTaGCAACGCTGTGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSCTSSR*QRCVLR
Trigger: CCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACA...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATCCCGCTGGAAGGCTCTaGTCCTCCTTCGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDPAGRL*SSFEGP
Trigger: TGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGG...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGAACGTGCTGGCTACTaGATTGTTAACACAACTTCA +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIERAGY*IVNTTS
Trigger: TGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTC...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR GCA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCGAATCATCTCTACGTaGTTAGGTTTACATGATGTC +
Preference number: 4 (lower is better)
Translates to: KWQMTSTLFLETASNVLARIIST*LGLHDV
Trigger: GACATCATGTAAACCTAAGCACGTAGAGATGATTCG...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATGCAGCCCACACAGCTaGCTCTGTGCCGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSCSPHS*LCAAFH
Trigger: ATGGAAGGCGGCACAGAGGCAGCTGTGTGGGCTGCA...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATCTGAGCTCATCTGGCTaGAGCTGGCCGAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDLSSSG*SWPRVR
Trigger: GCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAG...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGGTCTGGTGGCCGCGTaGCCATACGCTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFGLVAA*PYAGGT
Trigger: TGTGCCGCCAGCGTATGGCCACGCGGCCACCAGACC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CAA 72 bp CACAGCTGCCTCTGTGCCGCCTTCCATGTGATCATCTaGGTCAATGAAGTGAATTGTCCTATTTCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: HSCLCAAFHVII*VNEVNCPISGV
Trigger: TACCCCAGAAATAGGACAATTCACTTCATTGACCAAGATGATCACATGGAAGGCGGCACAGAGGCAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGCCAACGCTGTGTTTTaGGGGCCTGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDANAVF*GPGWAG
Trigger: TCCAGCCCAGCCAGGCCCTCAAAACACAGCGTTGGC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGGCGGAGGCAGTAGATaGGGCCAGAGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFGGGSR*GQRPGG
Trigger: TCCTCCTGGCCTCTGGCCTCATCTACTGCCTCCGCC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCTTTGGCCATCTTGTTaGGAACCATGTCGATCAGGA +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICLWPSC*EPCRSG
Trigger: TCCTGATCGACATGGTTCTCAACAAGATGGCCAAAG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATTACCCGGCGCAGTGTTaGTGGAGACGCAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDYPAQC*WRRSEE
Trigger: CTCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTA...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATCCGCTCTCCCAGGGCTaGCTCGAGCTACTCCATGGT +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDPLSQG*LELLHG
Trigger: ACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGG...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCAGGGCCCTATTACTATaGAGTTATAATAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: KVADDKHTLPGNRLERAGRALLL*SYNRRH
Trigger: GTGTCTTCTATTATAACTGCATAGTAATAGGGCCCT...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCAGAGGGCCCAGGCATCTaGTTTTGGAGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSEGPGI*FWSSPN
Trigger: GTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTC...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGACTTTGTTGTCAACTGTaGCCTTCTCCACATCCTCAG +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRLCCQL*PSPHPQ
Trigger: CTGAGGATGTGGAGAAGGCCACAGTTGACAACAAAG...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTAACACATCTCAATGTTaGGGTGCATCTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCINTSQC*GASVTL
Trigger: CAAAGTTACAGATGCACCCCAACATTGAGATGTGTT...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCTTTGGCCATCTTGTTaGGAACCATGTCGATCAGGA +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSLWPSC*EPCRSG
Trigger: TCCTGATCGACATGGTTCTCAACAAGATGGCCAAAG...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCACCCGAAAGTGGCAGATaGCAAGCACACTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSPESGR*QAHSSW
Trigger: CCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGG...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTCTGGGGTAGGGGGTaGTGGCGAATCGGATACTCA +
Preference number: 4 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSFWGRG*WRIGYS
Trigger: TGAGTATCCGATTCGCCATCACCCCCTACCCCAGAA...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGATCATCTTGGTCAATaGAGTGAATTGTCCTATTTC +
Preference number: 4 (lower is better)
Translates to: DDKHTLPGNRLERAGYCIDHLGQ*SELSYF
Trigger: GAAATAGGACAATTCACTTCATTGACCAAGATGATC...AATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCCGAATCATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATCCGAATGCGGCTGCTaGCCCAGCAGATCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: IRIISTCLGLHDVKTRGSSECGC*PSRSLE
Trigger: TTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGA...TGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGATGATTCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGAGGGCCCTATTACTATaGAGTTATAATAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: MTSTLFLETASNVLATALRALLL*SYNRRH
Trigger: GTGTCTTCTATTATAACTGCATAGTAATAGGGCCCT...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTAGGGCCTGGCTGGGCTaGATGCTTCAGGACGCCTCA +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFRAWLG*MLQDAS
Trigger: TGAGGCGTCCTGAAGCATCCAGCCCAGCCAGGCCCT...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGACCCTCCACCCGTAACTaGATTTTTCCACAAATCTCT +
Preference number: 4 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRPSTRN*IFPQIS
Trigger: AGAGATTTGTGGAAAAATCCAGTTACGGGTGGAGGG...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTTCCTTCAGCCTGTGCTaGGAGCTATGGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFSFSLC*ELWRRQ
Trigger: CTGCCTCCGCCATAGCTCTCAGCACAGGCTGAAGGA...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATCAGCCCTCTCCGAGTTaGCCTGATCTCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDQPSPS*PDLLLS
Trigger: GGAGAGAAGGAGATCAGGGCAACTCGGAGAGGGCTG...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTTCTTTGGAATACGTCTaGCTCTTGACGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSSLEYV*LLTFST
Trigger: AGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGA...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATCCAGGCATCTGGTTTTaGAGCTCCCCAAACGCAGCG +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDPGIWF*SSPNAA
Trigger: CGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGG...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGAGGGCCCAGGCATCTaGTTTTGGAGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDEGPGI*FWSSPN
Trigger: GTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTCCCTCCACCCGTAACTaGATTTTTCCACAAATCTCT +
Preference number: 4 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSPSTRN*IFPQIS
Trigger: AGAGATTTGTGGAAAAATCCAGTTACGGGTGGAGGG...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGTGGGAAGGGCGGGATaGAGGTGCGTTTTCTACGCT +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDVGRAG*RCVFYA
Trigger: AGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCAC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATTCTTCTTGCTCCGCCTaGGGAGGCAGGAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDSSCSA*GGRNLS
Trigger: ACTCAAGTTCCTGCCTCCTCAGGCGGAGCAAGAAGA...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGTAACTTTGCAAAGGTaGGGTCAGGGGAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDVTLQR*GQGSAS
Trigger: GCTGGCACTCCCCTGACCTCACCTTTGCAAAGTTAC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATCACTTGCCCCGAAGCTaGAGGACGTTCAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDHLPRS*RTFSSV
Trigger: GACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTG...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCGAATCATCTCTACGTaGTTAGGTTTACATGATGTC +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICRIIST*LGLHDV
Trigger: GACATCATGTAAACCTAAGCACGTAGAGATGATTCG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATTGTGTTTTGAGGGCCTaGCTGGGCTGGATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDCVLRA*LGWMLQ
Trigger: CTGAAGCATCCAGCCCAGCCAGGCCCTCAAAACACA...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTAGTGGGCACTACTCATaGGGTGCACAGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFSGHYS*GAQVSA
Trigger: GGCAGACACCTGTGCACCCCATGAGTAGTGCCCACT...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATTCAGATCATGATTCCTaGCAACATCCGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDSDHDS*QHPWGG
Trigger: CCCACCCCACGGATGTTGTCAGGAATCATGATCTGA...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTACGTGGTTCATTAAGTaGTCCCGGGAAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFTWFIK*SREEGQ
Trigger: CTGCCCCTCTTCCCGGGATCACTTAATGAACCACGT...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTGATCATCTTGGTCAATaGAGTGAATTGTCCTATTTC +
Preference number: 4 (lower is better)
Translates to: LFFLVVVISQVSIHGGICDHLGQ*SELSYF
Trigger: GAAATAGGACAATTCACTTCATTGACCAAGATGATC...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGCGGTAAAAGTCCATTaGCGGAACCTTCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDAVKVH*RNLLAP
Trigger: AGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR GCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTCTCTCCCACACCATCTaGCAAAAGTCAGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFLSHTI*QKSATV
Trigger: CACCGTGGCTGACTTTTGGCAGATGGTGTGGGAGAG...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGTGCTCCAGGGTCGCTaGGATATCAATCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDVLQGR*DINLFS
Trigger: GCTAAAGAGATTGATATCGCAGCGACCCTGGAGCAC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
3UTR CAA 72 bp TTCATTACAATACCATGTAGAGACATAAGCAATATTTaGGCATCATTCTGTCCGCTCAGTAGGCCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: FITIPCRDISNI*ASFCPLSRPCS
Trigger: GGAACACGGCCTACTGAGCGGACAGAATGATGCCAAAATATTGCTTATGTCTCTACATGGTATTGTAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR TCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTCTTTGGCCATCTTGTTaGGAACCATGTCGATCAGGA +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFLWPSC*EPCRSG
Trigger: TCCTGATCGACATGGTTCTCAACAAGATGGCCAAAG...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp ATCTCTACGTGCTTAGGTTTACATGATGTCAAAACACGTGGTTCATTAAGTGATGAACGTGCTGGCTACTaGATTGTTAACACAACTTCA +
Preference number: 4 (lower is better)
Translates to: ISTCLGLHDVKTRGSLSDERAGY*IVNTTS
Trigger: TGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTC...ATCACTTAATGAACCACGTGTTTTGACATCATGTAAACCTAAGCACGTAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR GCA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGAACGTGCTGGCTACTaGATTGTTAACACAACTTCA +
Preference number: 4 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFERAGY*IVNTTS
Trigger: TGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CCA 90 bp CCTGGGACAGGGCCTCCAGGAAGGGCAGGTGGCGTCGGAGGGCGTTaGCCAGGGCAGCACCGCCCTCCCGACTGTACCTCCTCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: PGTGPPGRAGGVGGR*PGQHRPPDCTSSRC
Trigger: GCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGAGGCCCTGTCCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS-3UTR CAA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCACGGAGGGTGGCCTaGGGGCCATCCGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDPRRVA*GPSACS
Trigger: AGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGG...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGCCAGGGAGCGGTTCTaGGGCACGTTCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDARERF*GTFSSL
Trigger: GAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGGC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGCCCAGGCATCTGGTTTaGGAGCTCCCCAAACGCAGC +
Preference number: 5 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRPRHLV*ELPKRS
Trigger: GCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGG...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 90 bp GCTGGTCCGAGAACCTCCACGTCAGCGAACGCACTGCTGGGCACCTaGAGGAGGCGGGCGACGTCCTCCACCAGCCGCCTTCCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: AGPRTSTSANALLGT*RRRATSSTSRLPSS
Trigger: CGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTGACGTGGAGGTTCTCGGACCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CCA 90 bp TCCACACCACTGTCCACCTTAGGGCTGAGCTCATCTGGCTGGAGCTaGCCGAGGGTCCGCGGCAGGAGGTCCTCGCGGAGCTGGGTCCGG +
Preference number: 5 (lower is better)
Translates to: STPLSTLGLSSSGWS*PRVRGRRSSRSWVR
Trigger: CCGGACCCAGCTCCGCGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS-3UTR CAA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACCACGGAGGGTGGCCTaGGGGCCATCCGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSPRRVA*GPSACS
Trigger: AGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCTTGGTGGAGTCTTCTaGCTCCGCCTGAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDLGGVF*LRLRRQ
Trigger: CTGCCTCCTCAGGCGGAGCAAGAAGACTCCACCAAG...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS TCA 90 bp TCGGAAGGCTGGACCTCCAATTGCAGGCCGTCGCTGAGGGCCTCCTaGGCACCCGCTGGAAGGCTCTGCTCCTCCTTCGAGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SEGWTSNCRPSLRAS*APAGRLCSSFEGPG
Trigger: GCCTGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 90 bp AGGTCACTGCTGGTCCGAGAACCTCCACGTCAGCGAACGCACTGCTaGGCACCTGCAGGAGGCGGGCGACGTCCTCCACCAGCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: RSLLVREPPRQRTHC*APAGGGRRPPPAAF
Trigger: GAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTGACGTGGAGGTTCTCGGACCAGCAGTGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 90 bp CTCCATGGTCCACGCCTTGCATCAGGCCAGCCATCAGCTCAGCCATaGCGTCCAGCTCCAGGCCACTCAGGCCCCTCACCTCAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: LHGPRLASGQPSAQP*RPAPGHSGPSPQPA
Trigger: AGCCGGCTGAGGTGAGGGGCCTGAGTGGCCTGGAGCTGGACGGCATGGCTGAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 90 bp TGTCTGTCCACACCACTGTCCACCTTAGGGCTGAGCTCATCTGGCTaGAGCTGGCCGAGGGTCCGCGGCAGGAGGTCCTCGCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: CLSTPLSTLGLSSSG*SWPRVRGRRSSRSW
Trigger: CCAGCTCCGCGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGACAGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS-3UTR CAA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGAGGCTGGACCTCCAATaGCAGGCCGTCGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRRLDLQ*QAVAEG
Trigger: GCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCT...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACGTGAGCGCGATGAACTaGGTGGAGTCTTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: TCLEEPAGAWQGSCAPGDVSAMN*VESSCS
Trigger: GGAGCAAGAAGACTCCACCAAGTTCATCGCGCTCAC...GTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAAATGCCAAACGTGCCTaGTGTGCCGGGCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSNAKRA*CAGRPH
Trigger: GTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATT...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 90 bp CATCCGCCTGTTCTCCAGACTCTCCCAGGGCCGCTCTCCCAGGGCTaGCTCGAGCTACTCCATGGTCCACGCCTTGCATCAGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: HPPVLQTLPGPLSQG*LELLHGPRLASGQP
Trigger: TGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCTGGGAGAGTCTGGAGAACAGGCGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 90 bp ATGGTGTCTGTCCACACCACTGTCCACCTTAGGGCTGAGCTCATCTaGCTGGAGCTGGCCGAGGGTCCGCGGCAGGAGGTCCTCGCGGAG +
Preference number: 5 (lower is better)
Translates to: MVSVHTTVHLRAELI*LELAEGPRQEVLAE
Trigger: CTCCGCGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGACAGACACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 90 bp CCTGCACTCCGTCATCTGGAAAGCTGTCTCCACGGAGGGTGGCCTTaGGGCCATCCGCCTGTTCTCCAGACTCTCCCAGGGCCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PALRHLESCLHGGWP*GHPPVLQTLPGPLS
Trigger: GGAGAGCGGCCCTGGGAGAGTCTGGAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 90 bp GGACCCGGGAGTGGTCATAGGTCAGCACGGCCAGGGAGCGGTTCTTaGGCACGTTCTCCTCCCTCTGGGCCACGAACGAGCTGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: GPGSGHRSARPGSGS*ARSPPSGPRTSCWA
Trigger: AGCCCAACAGCTCGTTCGTGGCCCAGAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGGCCGTGCTGACCTATGACCACTCCCGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS CCA 90 bp GACCTCCAATTGCAGGCCGTCGCTGAGGGCCTCCTGAGCACCCGCTaGAAGGCTCTGCTCCTCCTTCGAGGGCCCAGGCATCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: DLQLQAVAEGLLSTR*KALLLLRGPRHLVL
Trigger: CAAAACCAGATGCCTGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 90 bp GGTTCTTGGGCACGTTCTCCTCCCTCTGGGCCACGAACGAGCTGTTaGGCTCCGCCTGGTAGGCGCACAGCGCTTCCCACTCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GSWARSPPSGPRTSC*APPGRRTALPTPSP
Trigger: TGGAGAAGGAGTGGGAAGCGCTGTGCGCCTACCAGGCGGAGCCCAACAGCTCGTTCGTGGCCCAGAGGGAGGAGAACGTGCCCAAGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCAGCGGTAAAAGTCCATaGCCGGAACCTTCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LVCRAASLSAASFPGHSCSGKSP*PEPSGT
Trigger: GGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCT...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR CAA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGCTCAATGCCCAGATTaGTTCTTCCTGGTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRAQCPD*FFLVVV
Trigger: AACCACAACCAGGAAGAACAAATCTGGGCATTGAGC...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 90 bp CTTGCAAAGGGGAGGGCTCCAGGTAAGAGTCGAGACCCGTGGTCCTaGAGGAGGCCCCCGAGTGTGGCACTCAGACGATGGACCTCTTGG +
Preference number: 5 (lower is better)
Translates to: LAKGRAPGKSRDPWS*RRPPSVALRRWTSW
Trigger: CCAAGAGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 90 bp TGGAGCTCCCCAAACGCAGCGGCCCCGGGCTCCGAATGCGGCTGCTaGCCCAGCAGATCTTTGGAATACGTCTGGCTCTTGACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: WSSPNAAAPGSECGC*PSRSLEYVWLLTFS
Trigger: GGAGAACGTCAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS-3UTR CAA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAGGCAGGAACTTGAGTTaGCTTTTCGACCCGACTCCG +
Preference number: 5 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSGRNLS*LFDPTP
Trigger: CGGAGTCGGGTCGAAAAGCAAACTCAAGTTCCTGCC...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTGCCAGGGAGCGGTTCTaGGGCACGTTCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLARERF*GTFSSL
Trigger: GAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGGC...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCACTGGGGAAGGGCCTaGAGGATGGCGTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLHWGRA*RMAFTS
Trigger: GGAGGTGAACGCCATCCTCAAGGCCCTTCCCCAGTG...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 90 bp GCGCTGCAGGGCCACGGGCGACACCTCGTAGCGGTAAAAGTCCATTaGCGGAACCTTCTGGCACCTTCCAAACACTCCATCCAGACGCCC +
Preference number: 5 (lower is better)
Translates to: ALQGHGRHLVAVKVH*RNLLAPSKHSIQTP
Trigger: GGGCGTCTGGATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389416.8
CDS-3UTR CAA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCATGGTCCACGCCTaGCATCAGGCCAGCCATCAG +
Preference number: 5 (lower is better)
Translates to: LSREGNARSPLRVALISFSMVHA*HQASHQ
Trigger: CTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGA...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCCCACGGAGGGTGGCCTaGGGGCCATCCGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: STLPKVADDKHTLPGNRLPRRVA*GPSACS
Trigger: AGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGG...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCAAGGCCTGGGCATTCTaGAGGGTGCACGCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLKAWAF*RVHAEG
Trigger: ACCTTCTGCGTGCACCCTCAAGAATGCCCAGGCCTT...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACCCATGTCGAGGGGCCTaGCAAAGGGGAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSRKWQMTSTLFLETASNPCRGA*QRGGLQ
Trigger: CTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATGG...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGCCAGGGAGCGGTTCTaGGGCACGTTCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: STLPKVADDKHTLPGNRLARERF*GTFSSL
Trigger: GAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGGC...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCACCTTTGGCCATCTTGTaGAGAACCATGTCGATCAGG +
Preference number: 5 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSPLAIL*RTMSIR
Trigger: CCTGATCGACATGGTTCTCAACAAGATGGCCAAAGG...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACAAATGCCAAACGTGCCTaGTGTGCCGGGCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTNAKRA*CAGRPH
Trigger: GTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATT...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGGTACCCGGCGCAGTGTaGATGGAGACGCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: PPSRKWQMTSTLFLETASVPGAV*METQRG
Trigger: TCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTAC...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CGGGACGTGCCTGGAGGAGCCAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGAAACACATCTCAATGTaGGGGTGCATCTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: RDVPGGASGGLAGFVCSRKHISM*GCICNF
Trigger: AAAGTTACAGATGCACCCCAACATTGAGATGTGTTT...CCGGGAGCACACGAACCCTGCCAGGCCCCCGCTGGCTCCTCCAGGCACGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS TCA 90 bp GTTCCTCGGGTCGTGATCCATGATGGGGCTAGCGTTGATGTAGTCTaGGTGGCTGTGGCTGTTCTCCGCCTTCAGCAGGACCCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: VPRVVIHDGASVDVV*VAVAVLRLQQDPGV
Trigger: CACTCCCGGGTCCTGCTGAAGGCGGAGAACAGCCACAGCCACTCAGACTACATCAACGCTAGCCCCATCATGGATCACGACCCGAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCCATGTCGAGGGGCCTaGCAAAGGGGAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PKVADDKHTLPGNRLERAPCRGA*QRGGLQ
Trigger: CTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATGG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCCATGTCGAGGGGCCTaGCAAAGGGGAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RKWQMTSTLFLETASNVLPCRGA*QRGGLQ
Trigger: CTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATGG...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTCCATGTCGAGGGGCCTaGCAAAGGGGAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WQMTSTLFLETASNVLATPCRGA*QRGGLQ
Trigger: CTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATGG...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGCCCAGGCATCTGGTTTaGGAGCTCCCCAAACGCAGC +
Preference number: 5 (lower is better)
Translates to: PPSRKWQMTSTLFLETASPRHLV*ELPKRS
Trigger: GCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGG...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCAGGCTGGACCTCCAATaGCAGGCCGTCGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: KVADDKHTLPGNRLERAGRLDLQ*QAVAEG
Trigger: GCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCT...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTAGGCTGGACCTCCAATaGCAGGCCGTCGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: WQMTSTLFLETASNVLATRLDLQ*QAVAEG
Trigger: GCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCT...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGAGGCTGGACCTCCAATaGCAGGCCGTCGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SRKWQMTSTLFLETASNVRLDLQ*QAVAEG
Trigger: GCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCT...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCACATTGGCGCTCACTTaGAAGGTCACTGCTGGTCCG +
Preference number: 5 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLTLALT*KVTAGP
Trigger: CGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGT...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCTCAGTGGTCACGTTTaGGACATTGGCGCTCACTTT +
Preference number: 5 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRLSGHV*DIGAHF
Trigger: AAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGCGACCCGACTCCGGTTaGAAGAATTTTCAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRRPDSG*KNFQSR
Trigger: TCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTCG...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGGCAGGAACTTGAGTTaGCTTTTCGACCCGACTCCG +
Preference number: 5 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLGRNLS*LFDPTP
Trigger: CGGAGTCGGGTCGAAAAGCAAACTCAAGTTCCTGCC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCGTGAGCGCGATGAACTaGGTGGAGTCTTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LPGGKCSQPSPSCPDLLLVSAMN*VESSCS
Trigger: GGAGCAAGAAGACTCCACCAAGTTCATCGCGCTCAC...GAGAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGGCCAGGGAGCGGTTCTaGGGCACGTTCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SRKWQMTSTLFLETASNVARERF*GTFSSL
Trigger: GAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGGC...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAACCTTTGGCCATCTTGTaGAGAACCATGTCGATCAGG +
Preference number: 5 (lower is better)
Translates to: PGSTQCVQVALISSPGREPLAIL*RTMSIR
Trigger: CCTGATCGACATGGTTCTCAACAAGATGGCCAAAGG...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GATCCCGGGAAGAGGGGCAGGGCCGGTCGGCTGGTTTCTCACTTCCCTTCCAGGGCACCTTTGGCCATCTaGTTGAGAACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: DPGKRGRAGRLVSHFPSRAPLAI*LRTMSI
Trigger: GATCGACATGGTTCTCAACAAGATGGCCAAAGGTGC...CCTGGAAGGGAAGTGAGAAACCAGCCGACCGGCCCTGCCCCTCTTCCCGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTCCCCGGCCACTCCTGCATCTCTTTAGCACCTTaGGCCATCTTGTTGAGAACC +
Preference number: 5 (lower is better)
Translates to: LVCRAASLSAASFPGHSCISLAP*AILLRT
Trigger: GGTTCTCAACAAGATGGCCAAAGGTGCTAAAGAGAT...GCAGGAGTGGCCGGGGAAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACCACTGGGGAAGGGCCTaGAGGATGGCGTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: PSRKWQMTSTLFLETASNHWGRA*RMAFTS
Trigger: GGAGGTGAACGCCATCCTCAAGGCCCTTCCCCAGTG...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACAATGCCAAACGTGCCTaGTGTGCCGGGCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: VADDKHTLPGNRLERAGYNAKRA*CAGRPH
Trigger: GTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATT...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACGTGTGGGGAAGGGCCTaGAGGATGGCGTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: VADDKHTLPGNRLERAGYVWGRA*RMAFTS
Trigger: GGAGGTGAACGCCATCCTCAAGGCCCTTCCCCACAC...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648371.1
CDS GCA 90 bp GCGCTGCAGGGCCACGGGCGACACCTCGTAGCGGTAAAAGTCCATTaGCGGAACCTTCTGGCACCTTCCAAACACTCCATCGTTCACACA +
Preference number: 5 (lower is better)
Translates to: ALQGHGRHLVAVKVH*RNLLAPSKHSIVHT
Trigger: TGTGTGAACGATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389413.7
ENST00000389418.9
CDS-3UTR CAA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCTCCATGGTCCACGCCTaGCATCAGGCCAGCCATCAG +
Preference number: 5 (lower is better)
Translates to: STLPKVADDKHTLPGNRLSMVHA*HQASHQ
Trigger: CTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGA...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACCCCAGGCATCTGGTTTaGGAGCTCCCCAAACGCAGC +
Preference number: 5 (lower is better)
Translates to: PSRKWQMTSTLFLETASNPRHLV*ELPKRS
Trigger: GCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGG...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAATCCTCCAGTTTGTCTTaGTTGTCAACTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PGSTQCVQVALISSPGRESSSLS*LSTVAF
Trigger: GAAGGCCACAGTTGACAACAAAGACAAACTGGAGGA...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCTTGGTGGAGTCTTCTaGCTCCGCCTGAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLLGGVF*LRLRRQ
Trigger: CTGCCTCCTCAGGCGGAGCAAGAAGACTCCACCAAG...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GAAATGCCAAACGTGCCTTGTGTGCCGGGCGGCCTCACTGAGTGCTGCCAGCTTTTCTCCAGCCGGTTCTaGTTCTTCAGGTGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: EMPNVPCVPGGLTECCQLFSSRF*FFRWSS
Trigger: GGAGGACCACCTGAAGAACAAGAACCGGCTGGAGAA...AAGCTGGCAGCACTCAGTGAGGCCGCCCGGCACACAAGGCACGTTTGGCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGCCAGGGAGCGGTTCTaGGGCACGTTCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: MTSTLFLETASNVLATALARERF*GTFSSL
Trigger: GAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGGC...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACACTGGGGAAGGGCCTaGAGGATGGCGTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEHWGRA*RMAFTS
Trigger: GGAGGTGAACGCCATCCTCAAGGCCCTTCCCCAGTG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCACTGGGGAAGGGCCTaGAGGATGGCGTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: PKVADDKHTLPGNRLERAHWGRA*RMAFTS
Trigger: GGAGGTGAACGCCATCCTCAAGGCCCTTCCCCAGTG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTACCCGGCGCAGTGTaGATGGAGACGCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: PKVADDKHTLPGNRLERAVPGAV*METQRG
Trigger: TCCTCGCTGCGTCTCCATCAACACTGCGCCGGGTAC...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGTCCATGGTCCACGCCTaGCATCAGGCCAGCCATCAG +
Preference number: 5 (lower is better)
Translates to: SRKWQMTSTLFLETASNVSMVHA*HQASHQ
Trigger: CTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGA...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCACATTGGCGCTCACTTaGAAGGTCACTGCTGGTCCG +
Preference number: 5 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPTLALT*KVTAGP
Trigger: CGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGT...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGTCACGTTTTGGACATaGGCGCTCACTTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRVTFWT*ALTLKV
Trigger: GACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGAC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACCCTTCTCCAGCCGGTTCTaGTTCTTCAGGTGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: WRNAVGRAGWRCVFYAEPFSSRF*FFRWSS
Trigger: GGAGGACCACCTGAAGAACAAGAACCGGCTGGAGAA...GGGTTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGACCTTTGGCCATCTTGTaGAGAACCATGTCGATCAGG +
Preference number: 5 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRPLAIL*RTMSIR
Trigger: CCTGATCGACATGGTTCTCAACAAGATGGCCAAAGG...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 90 bp AACTGCTCCTTCGTCTGGACCATGCCGGGTCTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATATCAATCTCTTTAGCACCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: NCSFVWTMPGLWSLK*SRVAAISISLAPLA
Trigger: GGCCAAAGGTGCTAAAGAGATTGATATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAGACCCGGCATGGTCCAGACGAAGGAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTAAGGCCTGGGCATTCTaGAGGGTGCACGCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: LPKVADDKHTLPGNRLERKAWAF*RVHAEG
Trigger: ACCTTCTGCGTGCACCCTCAAGAATGCCCAGGCCTT...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGAATACGTCTGGCTCTaGACGTTCTCCACTCCGGCA +
Preference number: 5 (lower is better)
Translates to: PSRKWQMTSTLFLETASNEYVWL*TFSTPA
Trigger: TGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTC...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCTCCAGTTTGTCTTTGTaGTCAACTGTGGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LSREGNARSPLRVALISFSSLSL*STVAFS
Trigger: GGAGAAGGCCACAGTTGACAACAAAGACAAACTGGA...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGGCAGGAACTTGAGTTaGCTTTTCGACCCGACTCCG +
Preference number: 5 (lower is better)
Translates to: STLPKVADDKHTLPGNRLGRNLS*LFDPTP
Trigger: CGGAGTCGGGTCGAAAAGCAAACTCAAGTTCCTGCC...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACTTCTCCAGCCGGTTCTaGTTCTTCAGGTGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSRKWQMTSTLFLETASNFSSRF*FFRWSS
Trigger: GGAGGACCACCTGAAGAACAAGAACCGGCTGGAGAA...GTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGGGGACCCTCATAGCTaGCTCAATGCCCAGATTTGT +
Preference number: 5 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQGDPHS*LNAQIC
Trigger: ACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCCC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAAGACATAAGCAATATTTaGGCATCATTCTGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: PGSTQCVQVALISSPGREDISNI*ASFCPL
Trigger: GAGCGGACAGAATGATGCCAAAATATTGCTTATGTC...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS TCA 90 bp TCTCCACATCCTCAGTGGTCACGTTTTGGACATTGGCGCTCACTTTaGAGGTCACTGCTGGTCCGAGAACCTCCACGTCAGCGAACGCAC +
Preference number: 5 (lower is better)
Translates to: SPHPQWSRFGHWRSL*RSLLVREPPRQRTH
Trigger: GTGCGTTCGCTGACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 90 bp GCGCTGCAGGGCCACGGGCGACACCTCGTAGCGGTAAAAGTCCATTaGCGGAACCTTCTGGCACCTTCCAAACACTCCATCTTATTTTCA +
Preference number: 5 (lower is better)
Translates to: ALQGHGRHLVAVKVH*RNLLAPSKHSILFS
Trigger: TGAAAATAAGATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632665.1
CDS-3UTR CAA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAAGCGGTAAAAGTCCATaGCCGGAACCTTCTGGCACC +
Preference number: 5 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAESGKSP*PEPSGT
Trigger: GGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCT...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR CAA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTAGCGGTAAAAGTCCATaGCCGGAACCTTCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LPKVADDKHTLPGNRLERSGKSP*PEPSGT
Trigger: GGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCT...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS-3UTR CAA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGAATACGTCTGGCTCTaGACGTTCTCCACTCCGGCA +
Preference number: 5 (lower is better)
Translates to: WQMTSTLFLETASNVLATEYVWL*TFSTPA
Trigger: TGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTC...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGGAATACGTCTGGCTCTaGACGTTCTCCACTCCGGCA +
Preference number: 5 (lower is better)
Translates to: SRKWQMTSTLFLETASNVEYVWL*TFSTPA
Trigger: TGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTC...CACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCACATTGGCGCTCACTTaGAAGGTCACTGCTGGTCCG +
Preference number: 5 (lower is better)
Translates to: KVADDKHTLPGNRLERAGTLALT*KVTAGP
Trigger: CGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGT...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAACATTGGCGCTCACTTaGAAGGTCACTGCTGGTCCG +
Preference number: 5 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAETLALT*KVTAGP
Trigger: CGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGT...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGTCACGTTTTGGACATaGGCGCTCACTTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQVTFWT*ALTLKV
Trigger: GACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGAC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCGAGGTTTCCTCCAGTTaGTCTTTGTTGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: LSREGNARSPLRVALISFEVSSS*SLLSTV
Trigger: CACAGTTGACAACAAAGACAAACTGGAGGAAACCTC...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGGCAGGAACTTGAGTTaGCTTTTCGACCCGACTCCG +
Preference number: 5 (lower is better)
Translates to: WQMTSTLFLETASNVLATGRNLS*LFDPTP
Trigger: CGGAGTCGGGTCGAAAAGCAAACTCAAGTTCCTGCC...AGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTGAGCGCGATGAACTaGGTGGAGTCTTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: PKVADDKHTLPGNRLERAVSAMN*VESSCS
Trigger: GGAGCAAGAAGACTCCACCAAGTTCATCGCGCTCAC...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTTCTCCAGCCGGTTCTaGTTCTTCAGGTGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RKWQMTSTLFLETASNVLFSSRF*FFRWSS
Trigger: GGAGGACCACCTGAAGAACAAGAACCGGCTGGAGAA...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGGCACCTTTGGCCATCTaGTTGAGAACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: PPSRKWQMTSTLFLETASAPLAI*LRTMSI
Trigger: GATCGACATGGTTCTCAACAAGATGGCCAAAGGTGC...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CTCTCCCGGGAGGGAAATGCTCGCAGCCCTCTCCGAGTTGCCCTGATCTCCTTCGTGCTGGCTACTGCATaGTTAACACAACTTCAACCA +
Preference number: 5 (lower is better)
Translates to: LSREGNARSPLRVALISFVLATA*LTQLQP
Trigger: TGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCAC...GAAGGAGATCAGGGCAACTCGGAGAGGGCTGCGAGCATTTCCCTCCCGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCAATGCCCAGAGTGCTGGCTACTGCATaGTTAACACAACTTCAACCA +
Preference number: 5 (lower is better)
Translates to: PGRVRVLPGTLIACSMPRVLATA*LTQLQP
Trigger: TGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCAC...TCTGGGCATTGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CAGCGGGGGCCTGGCAGGGTTCGTGTGCTCCCGGGGACCCTCATAGCTTGCTCATTCCATGTGATCATCTaGGTCAATGAAGTGAATTGT +
Preference number: 5 (lower is better)
Translates to: QRGPGRVRVLPGTLIACSFHVII*VNEVNC
Trigger: ACAATTCACTTCATTGACCAAGATGATCACATGGAA...TGAGCAAGCTATGAGGGTCCCCGGGAGCACACGAACCCTGCCAGGCCCCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS TCA 90 bp ATACGTCTGGCTCTTGACGTTCTCCACTCCGGCAGTCTCCTCTTCTaGAGACAGGGAAGACTCAGGGTGCTCGGACTTCTTCCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: IRLALDVLHSGSLLF*RQGRLRVLGLLPLH
Trigger: ATGGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTTGCCCCAGCAGATCTTaGGAATACGTCTGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPKVADDKHTLPGNRLERCPSRS*EYVWLL
Trigger: CAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCA...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTGCCCCAGCAGATCTTaGGAATACGTCTGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RKWQMTSTLFLETASNVLCPSRS*EYVWLL
Trigger: CAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCA...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGTCCAGTTTGTCTTTGTaGTCAACTGTGGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PPSRKWQMTSTLFLETASSSLSL*STVAFS
Trigger: GGAGAAGGCCACAGTTGACAACAAAGACAAACTGGA...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATCCTCCAGTTTGTCTTaGTTGTCAACTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQSSSLS*LSTVAF
Trigger: GAAGGCCACAGTTGACAACAAAGACAAACTGGAGGA...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGGCACCTTTGGCCATCTaGTTGAGAACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLAPLAI*LRTMSI
Trigger: GATCGACATGGTTCTCAACAAGATGGCCAAAGGTGC...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GGCCACTCCTGCACAGTGGATCCACCCTCCCGAAAGTGGCAGATGACAAGCACAGCTCAATGCCCAGATTaGTTCTTCCTGGTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: GHSCTVDPPSRKWQMTSTAQCPD*FFLVVV
Trigger: AACCACAACCAGGAAGAACAAATCTGGGCATTGAGC...TGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGATCCACTGTGCAGGAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAAGGGGACCCTCATAGCTaGCTCAATGCCCAGATTTGT +
Preference number: 5 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAEGDPHS*LNAQIC
Trigger: ACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCCC...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACGGGGACCCTCATAGCTaGCTCAATGCCCAGATTTGT +
Preference number: 5 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINGDPHS*LNAQIC
Trigger: ACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCCC...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCAGGCTCTACGCAGTGCGTGCAGGTCGCCCTGATCTCCTCTCCCGGGAGGGAATTCCATGTGATCATCTaGGTCAATGAAGTGAATTGT +
Preference number: 5 (lower is better)
Translates to: PGSTQCVQVALISSPGREFHVII*VNEVNC
Trigger: ACAATTCACTTCATTGACCAAGATGATCACATGGAA...TTCCCTCCCGGGAGAGGAGATCAGGGCGACCTGCACGCACTGCGTAGAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 90 bp TGGGCTGGATGCTTCAGGACGCCTCAGGTAGGTTTTCGGGAGGTCTaGAAGTTCCTGGTCCATCACATACTGAGTATAGTCATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: WAGCFRTPQVGFREV*KFLVHHILSIVILP
Trigger: TGGCAGGATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCTGAGGCGTCCTGAAGCATCCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS-3UTR CAA 90 bp GTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTCCTCCAGTTTGTCTTaGTTGTCAACTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: VADDKHTLPGNRLERAGYSSSLS*LSTVAF
Trigger: GAAGGCCACAGTTGACAACAAAGACAAACTGGAGGA...GTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGGAGGTTTCCTCCAGTTaGTCTTTGTTGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: PPSRKWQMTSTLFLETASEVSSS*SLLSTV
Trigger: CACAGTTGACAACAAAGACAAACTGGAGGAAACCTC...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTCGACCCGACTCCGGTTaGAAGAATTTTCAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PKVADDKHTLPGNRLERARPDSG*KNFQSR
Trigger: TCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTCG...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AGATGGAGGAATGCTGTGGGAAGGGCGGGATGGAGGTGCGTTTTCTACGCTGAACGACCCGACTCCGGTTaGAAGAATTTTCAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: RWRNAVGRAGWRCVFYAERPDSG*KNFQSR
Trigger: TCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTCG...TTCAGCGTAGAAAACGCACCTCCATCCCGCCCTTCCCACAGCATTCCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTCGACCCGACTCCGGTTaGAAGAATTTTCAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: KWQMTSTLFLETASNVLARPDSG*KNFQSR
Trigger: TCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTCG...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGTGCAATGAACAATTATaGGACAAGAACGGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: PPSRKWQMTSTLFLETASCNEQL*DKNGPC
Trigger: ACAGGGGCCGTTCTTGTCCAATAATTGTTCATTGCA...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGCCTTTGGCCATCTTGTaGAGAACCATGTCGATCAGG +
Preference number: 5 (lower is better)
Translates to: RKWQMTSTLFLETASNVLPLAIL*RTMSIR
Trigger: CCTGATCGACATGGTTCTCAACAAGATGGCCAAAGG...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCACCTTTGGCCATCTTGTaGAGAACCATGTCGATCAGG +
Preference number: 5 (lower is better)
Translates to: QMTSTLFLETASNVLATAPLAIL*RTMSIR
Trigger: CCTGATCGACATGGTTCTCAACAAGATGGCCAAAGG...TGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp TGGAGGTGCGTTTTCTACGCTGAACCCCACACAGGAAATCTGCAGCCCACACAGCCTCTGGTAGGGCCTTaGGAGAGTACCATCTATCTA +
Preference number: 5 (lower is better)
Translates to: WRCVFYAEPHTGNLQPTQPLVGP*ESTIYL
Trigger: TAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGG...CTGTGTGGGCTGCAGATTTCCTGTGTGGGGTTCAGCGTAGAAAACGCACCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACCCTCTGGTAGGGCCTTaGGAGAGTACCATCTATCTA +
Preference number: 5 (lower is better)
Translates to: PEAAGRSVLSLRLLPMINPLVGP*ESTIYL
Trigger: TAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGG...GTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTCCTCTGGTAGGGCCTTaGGAGAGTACCATCTATCTA +
Preference number: 5 (lower is better)
Translates to: LPKVADDKHTLPGNRLERPLVGP*ESTIYL
Trigger: TAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGG...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS TCA 90 bp TCTCCACATCCTCAGTGGTCACGTTTTGGACATTGGCGCTCACTTTaGAGGTCACTGCTGGTCCGAGAACCTCTCTGTCTGTCACGATGT +
Preference number: 5 (lower is better)
Translates to: SPHPQWSRFGHWRSL*RSLLVREPLCLSRC
Trigger: ACATCGTGACAGACAGAGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS GCA 90 bp GACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTaGATTGTTAACACAACTTCAACCAAGAAGGTGAACGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: DKHTLPGNRLERAGY*IVNTTSTKKVNGCG
Trigger: CCCACACCCGTTCACCTTCTTGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648371.1
CDS CCA 90 bp TTGTTGTCAACTGTGGCCTTCTCCACATCCTCAGTGGTCACGTTTTaGACATTGGCGCTCACTTTGAAGGTCACTGCTGGTCCGAGAACC +
Preference number: 5 (lower is better)
Translates to: LLSTVAFSTSSVVTF*TLALTLKVTAGPRT
Trigger: GGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGAAGGCCACAGTTGACAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGTCACGTTTTGGACATaGGCGCTCACTTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: MTSTLFLETASNVLATALVTFWT*ALTLKV
Trigger: GACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGAC...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGCTCAGTGGTCACGTTTaGGACATTGGCGCTCACTTT +
Preference number: 5 (lower is better)
Translates to: MTSTLFLETASNVLATALLSGHV*DIGAHF
Trigger: AAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAG...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTCCAGTTTGTCTTTGTaGTCAACTGTGGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RKWQMTSTLFLETASNVLSSLSL*STVAFS
Trigger: GGAGAAGGCCACAGTTGACAACAAAGACAAACTGGA...CAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTTCCTCCAGTTTGTCTTaGTTGTCAACTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LPKVADDKHTLPGNRLERSSSLS*LSTVAF
Trigger: GAAGGCCACAGTTGACAACAAAGACAAACTGGAGGA...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCTTCTCCAGCCGGTTCTaGTTCTTCAGGTGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECFSSRF*FFRWSS
Trigger: GGAGGACCACCTGAAGAACAAGAACCGGCTGGAGAA...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCATCTCTTTAGCACCTTaGGCCATCTTGTTGAGAACC +
Preference number: 5 (lower is better)
Translates to: STLPKVADDKHTLPGNRLISLAP*AILLRT
Trigger: GGTTCTCAACAAGATGGCCAAAGGTGCTAAAGAGAT...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp GCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATCTCTTTAGCACCTTaGGCCATCTTGTTGAGAACC +
Preference number: 5 (lower is better)
Translates to: ADDKHTLPGNRLERAGYCISLAP*AILLRT
Trigger: GGTTCTCAACAAGATGGCCAAAGGTGCTAAAGAGAT...GCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAGACATAAGCAATATTTaGGCATCATTCTGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQDISNI*ASFCPL
Trigger: GAGCGGACAGAATGATGCCAAAATATTGCTTATGTC...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGAATACGTCTGGCTCTaGACGTTCTCCACTCCGGCA +
Preference number: 5 (lower is better)
Translates to: RTFSSVPAASPNDKLSQREYVWL*TFSTPA
Trigger: TGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTC...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGTCCAGTTTGTCTTTGTaGTCAACTGTGGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: MTSTLFLETASNVLATALSSLSL*STVAFS
Trigger: GGAGAAGGCCACAGTTGACAACAAAGACAAACTGGA...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAAGAGGTTTCCTCCAGTTaGTCTTTGTTGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: TLPKVADDKHTLPGNRLEEVSSS*SLLSTV
Trigger: CACAGTTGACAACAAAGACAAACTGGAGGAAACCTC...TTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGAGGTTTCCTCCAGTTaGTCTTTGTTGTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: LPKVADDKHTLPGNRLEREVSSS*SLLSTV
Trigger: CACAGTTGACAACAAAGACAAACTGGAGGAAACCTC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTTGCAATGAACAATTATaGGACAAGAACGGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: KWQMTSTLFLETASNVLACNEQL*DKNGPC
Trigger: ACAGGGGCCGTTCTTGTCCAATAATTGTTCATTGCA...AGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGTGCTGGCTACTGCATaGTTAACACAACTTCAACCA +
Preference number: 5 (lower is better)
Translates to: PKVADDKHTLPGNRLERAVLATA*LTQLQP
Trigger: TGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCAC...AGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGTGCTGGCTACTGCATaGTTAACACAACTTCAACCA +
Preference number: 5 (lower is better)
Translates to: LPKVADDKHTLPGNRLERVLATA*LTQLQP
Trigger: TGGTTGAAGTTGTGTTAACAATGCAGTAGCCAGCAC...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS-3UTR CAA 90 bp CCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAAACACATCTCAATGTaGGGGTGCATCTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: PPSRKWQMTSTLFLETASKHISM*GCICNF
Trigger: AAAGTTACAGATGCACCCCAACATTGAGATGTGTTT...CGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCACTTGCCCCGAAGCTGCAGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAAAAACACATCTCAATGTaGGGGTGCATCTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: SLAPKLQDVQFCPCGFSQKHISM*GCICNF
Trigger: AAAGTTACAGATGCACCCCAACATTGAGATGTGTTT...TTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCTGCAGCTTCGGGGCAAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp ATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCTACTGCATTGGCTCAATGCCCAGATTaGTTCTTCCTGGTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: MTSTLFLETASNVLATALAQCPD*FFLVVV
Trigger: AACCACAACCAGGAAGAACAAATCTGGGCATTGAGC...CAATGCAGTAGCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCGGGGACCCTCATAGCTaGCTCAATGCCCAGATTTGT +
Preference number: 5 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECGDPHS*LNAQIC
Trigger: ACAAATCTGGGCATTGAGCAAGCTATGAGGGTCCCC...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TCCACCCTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGACATAAGCAATATTTaGGCATCATTCTGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: STLPKVADDKHTLPGNRLDISNI*ASFCPL
Trigger: GAGCGGACAGAATGATGCCAAAATATTGCTTATGTC...GAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAGGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTTCCCTCTGGTAGGGCCTTTGGAGAGTACCATCTATCTAAGATGGAGGAATGCCTCAGTGGTCACGTTTaGGACATTGGCGCTCACTTT +
Preference number: 5 (lower is better)
Translates to: VPSGRAFGEYHLSKMEECLSGHV*DIGAHF
Trigger: AAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAG...GCATTCCTCCATCTTAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGCAAAACACATCTCAATGTaGGGGTGCATCTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: VDGDAARSCDCLTCPEAAKHISM*GCICNF
Trigger: AAAGTTACAGATGCACCCCAACATTGAGATGTGTTT...TGCAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTGCTGGCGACATAAGCAATATTTaGGCATCATTCTGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: KVADDKHTLPGNRLERAGDISNI*ASFCPL
Trigger: GAGCGGACAGAATGATGCCAAAATATTGCTTATGTC...GCCAGCACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GACCCTCATAGCTTGCTCAATGCCCAGATTTGTTCTTCCTGGTTGTGGTTATCTTGCCCCAGCAGATCTTaGGAATACGTCTGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: DPHSLLNAQICSSWLWLSCPSRS*EYVWLL
Trigger: CAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCA...AGATAACCACAACCAGGAAGAACAAATCTGGGCATTGAGCAAGCTATGAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAGTCACGTTTTGGACATaGGCGCTCACTTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRVTFWT*ALTLKV
Trigger: GACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGAC...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTGCACCTTTGGCCATCTaGTTGAGAACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: LFFLVVVISQVSIHGGICAPLAI*LRTMSI
Trigger: GATCGACATGGTTCTCAACAAGATGGCCAAAGGTGC...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GTGTTGATGGAGACGCAGCGAGGAGCTGTGATTGTCTCACTTGCCCCGAAGCTGTTCCATGTGATCATCTaGGTCAATGAAGTGAATTGT +
Preference number: 5 (lower is better)
Translates to: VLMETQRGAVIVSLAPKLFHVII*VNEVNC
Trigger: ACAATTCACTTCATTGACCAAGATGATCACATGGAA...CAGCTTCGGGGCAAGTGAGACAATCACAGCTCCTCGCTGCGTCTCCATCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTCCTCTGGTAGGGCCTTaGGAGAGTACCATCTATCTA +
Preference number: 5 (lower is better)
Translates to: LFFLVVVISQVSIHGGICPLVGP*ESTIYL
Trigger: TAGATAGATGGTACTCTCCAAAGGCCCTACCAGAGG...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp TTGTTCTTCCTGGTTGTGGTTATCTCACAGGTAAGCATTCACGGGGGCATCTGTGCTCAATGCCCAGATTaGTTCTTCCTGGTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LFFLVVVISQVSIHGGICAQCPD*FFLVVV
Trigger: AACCACAACCAGGAAGAACAAATCTGGGCATTGAGC...ACAGATGCCCCCGTGAATGCTTACCTGTGAGATAACCACAACCAGGAAGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp CTCCCGAAAGTGGCAGATGACAAGCACACTCTTCCTGGAAACCGCCTCGAACGTTTCCATGTGATCATCTaGGTCAATGAAGTGAATTGT +
Preference number: 5 (lower is better)
Translates to: LPKVADDKHTLPGNRLERFHVII*VNEVNC
Trigger: ACAATTCACTTCATTGACCAAGATGATCACATGGAA...ACGTTCGAGGCGGTTTCCAGGAAGAGTGTGCTTGTCATCTGCCACTTTCGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp AGGACGTTCAGTTCTGTCCCTGCGGCTTCTCCCAATGATAAACTCTCTCAAAGAATCTCTTTAGCACCTTaGGCCATCTTGTTGAGAACC +
Preference number: 5 (lower is better)
Translates to: RTFSSVPAASPNDKLSQRISLAP*AILLRT
Trigger: GGTTCTCAACAAGATGGCCAAAGGTGCTAAAGAGAT...TCTTTGAGAGAGTTTATCATTGGGAGAAGCCGCAGGGACAGAACTGAACGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTCTTGGTGGAGTCTTCTaGCTCCGCCTGAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFLGGVF*LRLRRQ
Trigger: CTGCCTCCTCAGGCGGAGCAAGAAGACTCCACCAAG...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGTGAGCGCGATGAACTaGGTGGAGTCTTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFVSAMN*VESSCS
Trigger: GGAGCAAGAAGACTCCACCAAGTTCATCGCGCTCAC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTGCACCTTTGGCCATCTaGTTGAGAACCATGTCGATC +
Preference number: 5 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFAPLAI*LRTMSI
Trigger: GATCGACATGGTTCTCAACAAGATGGCCAAAGGTGC...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS-3UTR CAA 90 bp GGATACTCAAATGTTATTTTGTCAAATCCGAATCATCTCTACGTGCTTAGGTTTTGCAATGAACAATTATaGGACAAGAACGGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: GYSNVILSNPNHLYVLRFCNEQL*DKNGPC
Trigger: ACAGGGGCCGTTCTTGTCCAATAATTGTTCATTGCA...AAACCTAAGCACGTAGAGATGATTCGGATTTGACAAAATAACATTTGAGTATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CAA 90 bp GCCTGGGACAGGGCCTCCAGGAAGGGCAGGTGGCGTCGGAGGGCGTaGGCCAGGGCAGCACCGCCCTCCCGACTGTACCTCCTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: AWDRASRKGRWRRRA*ARAAPPSRLYLLSL
Trigger: CAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGAGGCCCTGTCCCAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp TGGACTGCACAGGCTCCTCGGACCAGGATGAGGCGCTaGTGCGTGCGGAGGGGCTGGGGATCGGCCCGTCGC +
Preference number: 6 (lower is better)
Translates to: WTAQAPRTRMRR*CVRRGWGSARR
Trigger: GCGACGGGCCGATCCCCAGCCCCTCCGCACGCAGCAGCGCCTCATCCTGGTCCGAGGAGCCTGTGCAGTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CAA 72 bp AGGGCCTCCAGGAAGGGCAGGTGGCGTCGGAGGGCGTaGGCCAGGGCAGCACCGCCCTCCCGACTGTACCTC +
Preference number: 6 (lower is better)
Translates to: RASRKGRWRRRA*ARAAPPSRLYL
Trigger: GAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGAGGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 72 bp GCCCCGCGCCTCTTCCTCGGAAGGCTGGACCTCCAATaGCAGGCCGTCGCTGAGGGCCTCCTGAGCACCCGC +
Preference number: 6 (lower is better)
Translates to: APRLFLGRLDLQ*QAVAEGLLSTR
Trigger: GCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGAGGCGCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 72 bp CTGTCCACCTTAGGGCTGAGCTCATCTGGCTGGAGCTaGCCGAGGGTCCGCGGCAGGAGGTCCTCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: LSTLGLSSSGWS*PRVRGRRSSRS
Trigger: GCTCCGCGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 90 bp CGCTGGAAGGCTCTGCTCCTCCTTCGAGGGCCCAGGCATCTGGTTTaGGAGCTCCCCAAACGCAGCGGCCCCGGGCTCCGAATGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RWKALLLLRGPRHLV*ELPKRSGPGLRMRL
Trigger: CAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp GGGCAGCACCGCCCTCCCGACTGTACCTCCTCTCGCTaGCAACGCTGTGTTTTGAGGGCCTGGCTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GQHRPPDCTSSR*QRCVLRAWLGW
Trigger: CCAGCCCAGCCAGGCCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp CTGAACTGGGATGAGACGCTGCTGATGCGTGACGTGTaGGGGCCCTCAGGTCGGTCTGGTGGCCGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: LNWDETLLMRDV*GPSGRSGGRVA
Trigger: GGCCACGCGGCCACCAGACCGACCTGAGGGCCCGCACACGTCACGCATCAGCAGCGTCTCATCCCAGTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CAA 72 bp GCTCTGCTCCTCCTTCGAGGGCCCAGGCATCTGGTTTaGGAGCTCCCCAAACGCAGCGGCCCCGGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: ALLLLRGPRHLV*ELPKRSGPGLR
Trigger: TCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTCGAAGGAGGAGCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 90 bp CACGATGTAGCCCCGCGCCTCTTCCTCGGAAGGCTGGACCTCCAATaGCAGGCCGTCGCTGAGGGCCTCCTGAGCACCCGCTGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: HDVAPRLFLGRLDLQ*QAVAEGLLSTRWKA
Trigger: AGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGAGGCGCGGGGCTACATCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS TCA 72 bp CCTCGGAAGGCTGGACCTCCAATTGCAGGCCGTCGCTaGGGGCCTCCTGAGCACCCGCTGGAAGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PRKAGPPIAGRR*GPPEHPLEGSA
Trigger: AGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp TCATCCTGCCACGTGAAACCTGTGCCGGAAAGCTTCTaGAACGCCACGCGCAGGCGCTGCAGGGCCACGGGC +
Preference number: 6 (lower is better)
Translates to: SSCHVKPVPESF*NATRRRCRATG
Trigger: GCCCGTGGCCCTGCAGCGCCTGCGCGTGGCGTTGCAGAAGCTTTCCGGCACAGGTTTCACGTGGCAGGATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
CDS GCA 72 bp GGGAGGGCTCCAGGTAAGAGTCGAGACCCGTGGTCCTaGAGGAGGCCCCCGAGTGTGGCACTCAGACGATGG +
Preference number: 6 (lower is better)
Translates to: GRAPGKSRDPWS*RRPPSVALRRW
Trigger: CCATCGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp GGTGACGGTTCTTCCTTGTCTGTGCCGGAAAGCTTCTaGAACGCCACGCGCAGGCGCTGCAGGGCCACGGGC +
Preference number: 6 (lower is better)
Translates to: GDGSSLSVPESF*NATRRRCRATG
Trigger: GCCCGTGGCCCTGCAGCGCCTGCGCGTGGCGTTGCAGAAGCTTTCCGGCACAGACAAGGAAGAACCGTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632665.1
CDS CCA 72 bp ACACCACTGTCCACCTTAGGGCTGAGCTCATCTGGCTaGAGCTGGCCGAGGGTCCGCGGCAGGAGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: TPLSTLGLSSSG*SWPRVRGRRSS
Trigger: CGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 72 bp GCACGTTCTCCTCCCTCTGGGCCACGAACGAGCTGTTaGGCTCCGCCTGGTAGGCGCACAGCGCTTCCCACT +
Preference number: 6 (lower is better)
Translates to: ARSPPSGPRTSC*APPGRRTALPT
Trigger: AGTGGGAAGCGCTGTGCGCCTACCAGGCGGAGCCCAACAGCTCGTTCGTGGCCCAGAGGGAGGAGAACGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS CCA 72 bp AAAAGTCAGCCACGGTGGCGGGCAGCGGTCCCTGGGTaGCGATGTACGCGGGGTTCCTCGGGTCGTGATCCA +
Preference number: 6 (lower is better)
Translates to: KSQPRWRAAVPG*RCTRGSSGRDP
Trigger: TGGATCACGACCCGAGGAACCCCGCGTACATCGCCACCCAGGGACCGCTGCCCGCCACCGTGGCTGACTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS GCA 72 bp CCAGGGCTGCCTCGAGCTACTCCATGGTCCACGCCTTaGATCAGGCCAGCCATCAGCTCAGCCATGCCGTCC +
Preference number: 6 (lower is better)
Translates to: PGLPRATPWSTP*IRPAISSAMPS
Trigger: GGACGGCATGGCTGAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 72 bp GCAAAGGGGAGGGCTCCAGGTAAGAGTCGAGACCCGTaGTCCTGCAGGAGGCCCCCGAGTGTGGCACTCAGA +
Preference number: 6 (lower is better)
Translates to: AKGRAPGKSRDP*SCRRPPSVALR
Trigger: TCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 72 bp CCCAGGGCTGCCTCGAGCTACTCCATGGTCCACGCCTaGCATCAGGCCAGCCATCAGCTCAGCCATGCCGTC +
Preference number: 6 (lower is better)
Translates to: PRAASSYSMVHA*HQASHQLSHAV
Trigger: GACGGCATGGCTGAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 90 bp TCCTGCACTCCGTCATCTGGAAAGCTGTCTCCACGGAGGGTGGCCTaGGGGCCATCCGCCTGTTCTCCAGACTCTCCCAGGGCCGCTCTC +
Preference number: 6 (lower is better)
Translates to: SCTPSSGKLSPRRVA*GPSACSPDSPRAAL
Trigger: GAGAGCGGCCCTGGGAGAGTCTGGAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 90 bp GCAGCGGCCCCGGGCTCCGAATGCGGCTGCTGCCCCAGCAGATCTTaGGAATACGTCTGGCTCTTGACGTTCTCCACTCCGGCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: AAAPGSECGCCPSRS*EYVWLLTFSTPAVS
Trigger: GGAGACTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp GTTCTCCAGACTCTCCCAGGGCCGCTCTCCCAGGGCTaGCTCGAGCTACTCCATGGTCCACGCCTTGCATCA +
Preference number: 6 (lower is better)
Translates to: VLQTLPGPLSQG*LELLHGPRLAS
Trigger: TGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCTGGGAGAGTCTGGAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp CCAAACGCAGCGGCCCCGGGCTCCGAATGCGGCTGCTaGCCCAGCAGATCTTTGGAATACGTCTGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: PNAAAPGSECGC*PSRSLEYVWLL
Trigger: CAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 72 bp CGTCATCTGGAAAGCTGTCTCCACGGAGGGTGGCCTTaGGGCCATCCGCCTGTTCTCCAGACTCTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: RHLESCLHGGWP*GHPPVLQTLPG
Trigger: CCCTGGGAGAGTCTGGAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CCA 72 bp AGTGGTCATAGGTCAGCACGGCCAGGGAGCGGTTCTTaGGCACGTTCTCCTCCCTCTGGGCCACGAACGAGC +
Preference number: 6 (lower is better)
Translates to: SGHRSARPGSGS*ARSPPSGPRTS
Trigger: GCTCGTTCGTGGCCCAGAGGGAGGAGAACGTGCCCAAGAACCGCTCCCTGGCCGTGCTGACCTATGACCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS CAA 72 bp CCGTCATCTGGAAAGCTGTCTCCACGGAGGGTGGCCTaGGGGCCATCCGCCTGTTCTCCAGACTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: PSSGKLSPRRVA*GPSACSPDSPR
Trigger: CCTGGGAGAGTCTGGAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 90 bp GGCGCTGCAGGGCCACGGGCGACACCTCGTAGCGGTAAAAGTCCATaGCCGGAACCTTCTGGCACCTTCCAAACACTCCATCCAGACGCC +
Preference number: 6 (lower is better)
Translates to: GAAGPRATPRSGKSP*PEPSGTFQTLHPDA
Trigger: GGCGTCTGGATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389416.8
CDS GCA 72 bp TCAGCGCGAACTCAAACTGCTCCTTCGTCTGGACCATaGCGGGTCTCTGGTCCCTCAAGTGCTCCAGGGTCG +
Preference number: 6 (lower is better)
Translates to: SARTQTAPSSGP*RVSGPSSAPGS
Trigger: CGACCCTGGAGCACTTGAGGGACCAGAGACCCGGCATGGTCCAGACGAAGGAGCAGTTTGAGTTCGCGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS CAA 72 bp GGTGCTCGGACTTCTTCCTCTCCATGTCGAGGGGCCTaGCAAAGGGGAGGGCTCCAGGTAAGAGTCGAGACC +
Preference number: 6 (lower is better)
Translates to: GARTSSSPCRGA*QRGGLQVRVET
Trigger: GGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATGGAGAGGAAGAAGTCCGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 72 bp CCGGGCTCCGAATGCGGCTGCTGCCCCAGCAGATCTTaGGAATACGTCTGGCTCTTGACGTTCTCCACTCCG +
Preference number: 6 (lower is better)
Translates to: PGSECGCCPSRS*EYVWLLTFSTP
Trigger: CGGAGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 90 bp AAGACTCAGGGTGCTCGGACTTCTTCCTCTCCATGTCGAGGGGCCTaGCAAAGGGGAGGGCTCCAGGTAAGAGTCGAGACCCGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: KTQGARTSSSPCRGA*QRGGLQVRVETRGP
Trigger: AGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATGGAGAGGAAGAAGTCCGAGCACCCTGAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 90 bp GGCGCTGCAGGGCCACGGGCGACACCTCGTAGCGGTAAAAGTCCATaGCCGGAACCTTCTGGCACCTTCCAAACACTCCATCGTTCACAC +
Preference number: 6 (lower is better)
Translates to: GAAGPRATPRSGKSP*PEPSGTFQTLHRSH
Trigger: GTGTGAACGATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389413.7
ENST00000389418.9
CDS CCA 72 bp GTCGAGACCCGTGGTCCTGCAGGAGGCCCCCGAGTGTaGCACTCAGACGATGGACCTCTTGGTAAAGTCTAT +
Preference number: 6 (lower is better)
Translates to: VETRGPAGGPRV*HSDDGPLGKVY
Trigger: ATAGACTTTACCAAGAGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp GGCCACGGGCGACACCTCGTAGCGGTAAAAGTCCATTaGCGGAACCTTCTGGCACCTTCCAAACACTCCATC +
Preference number: 6 (lower is better)
Translates to: GHGRHLVAVKVH*RNLLAPSKHSI
Trigger: GATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000632665.1
CDS CAA 72 bp GGGCCACGGGCGACACCTCGTAGCGGTAAAAGTCCATaGCCGGAACCTTCTGGCACCTTCCAAACACTCCAT +
Preference number: 6 (lower is better)
Translates to: GPRATPRSGKSP*PEPSGTFQTLH
Trigger: ATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000631503.1
ENST00000632665.1
ENST00000633393.1
ENST00000633583.1
CDS CAA 90 bp GGCGCTGCAGGGCCACGGGCGACACCTCGTAGCGGTAAAAGTCCATaGCCGGAACCTTCTGGCACCTTCCAAACACTCCATCTTATTTTC +
Preference number: 6 (lower is better)
Translates to: GAAGPRATPRSGKSP*PEPSGTFQTLHLIF
Trigger: GAAAATAAGATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632665.1
CDS TCA 72 bp GCTCTTGACGTTCTCCACTCCGGCAGTCTCCTCTTCTaGAGACAGGGAAGACTCAGGGTGCTCGGACTTCTT +
Preference number: 6 (lower is better)
Translates to: ALDVLHSGSLLF*RQGRLRVLGLL
Trigger: AAGAAGTCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS TCA 72 bp CCTCAGTGGTCACGTTTTGGACATTGGCGCTCACTTTaGAGGTCACTGCTGGTCCGAGAACCTCCACGTCAG +
Preference number: 6 (lower is better)
Translates to: PQWSRFGHWRSL*RSLLVREPPRQ
Trigger: CTGACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 72 bp CACGTTTTGGACATTGGCGCTCACTTTGAAGGTCACTaGTGGTCCGAGAACCTCCACGTCAGCGAACGCACT +
Preference number: 6 (lower is better)
Translates to: HVLDIGAHFEGH*WSENLHVSERT
Trigger: AGTGCGTTCGCTGACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CCA 72 bp GTTTTGGACATTGGCGCTCACTTTGAAGGTCACTGCTaGTCCGAGAACCTCCACGTCAGCGAACGCACTGCT +
Preference number: 6 (lower is better)
Translates to: VLDIGAHFEGHC*SENLHVSERTA
Trigger: AGCAGTGCGTTCGCTGACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CCA 72 bp CGGAGACCAGGTTCACCTCATAGATGTGGTAGAGATTaGAGCCTTCATCCGGCCAGTAGTGGTAGCACTGCC +
Preference number: 6 (lower is better)
Translates to: RRPGSPHRCGRD*SLHPASSGSTA
Trigger: GGCAGTGCTACCACTACTGGCCGGATGAAGGCTCCAATCTCTACCACATCTATGAGGTGAACCTGGTCTCCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS CAA 90 bp TTCTCCACATCCTCAGTGGTCACGTTTTGGACATTGGCGCTCACTTaGAAGGTCACTGCTGGTCCGAGAACCTCCACGTCAGCGAACGCA +
Preference number: 6 (lower is better)
Translates to: FSTSSVVTFWTLALT*KVTAGPRTSTSANA
Trigger: TGCGTTCGCTGACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CAA 90 bp TCAACTGTGGCCTTCTCCACATCCTCAGTGGTCACGTTTTGGACATaGGCGCTCACTTTGAAGGTCACTGCTGGTCCGAGAACCTCCACG +
Preference number: 6 (lower is better)
Translates to: STVAFSTSSVVTFWT*ALTLKVTAGPRTST
Trigger: CGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGAAGGCCACAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS TCA 72 bp CCTCAGTGGTCACGTTTTGGACATTGGCGCTCACTTTaGAGGTCACTGCTGGTCCGAGAACCTCTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PQWSRFGHWRSL*RSLLVREPLCL
Trigger: CAGACAGAGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS CAA 72 bp TGCTGCCCCAGCAGATCTTTGGAATACGTCTGGCTCTaGACGTTCTCCACTCCGGCAGTCTCCTCTTCTGAA +
Preference number: 6 (lower is better)
Translates to: CCPSRSLEYVWL*TFSTPAVSSSE
Trigger: TTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS CAA 72 bp TCCTCAGTGGTCACGTTTTGGACATTGGCGCTCACTTaGAAGGTCACTGCTGGTCCGAGAACCTCCACGTCA +
Preference number: 6 (lower is better)
Translates to: SSVVTFWTLALT*KVTAGPRTSTS
Trigger: TGACGTGGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CAA 72 bp GCCTTCTCCACATCCTCAGTGGTCACGTTTTGGACATaGGCGCTCACTTTGAAGGTCACTGCTGGTCCGAGA +
Preference number: 6 (lower is better)
Translates to: AFSTSSVVTFWT*ALTLKVTAGPR
Trigger: TCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CAA 90 bp TCAACTGTGGCCTTCTCCACATCCTCAGTGGTCACGTTTTGGACATaGGCGCTCACTTTGAAGGTCACTGCTGGTCCGAGAACCTCTCTG +
Preference number: 6 (lower is better)
Translates to: STVAFSTSSVVTFWT*ALTLKVTAGPRTSL
Trigger: CAGAGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGAAGGCCACAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS TCA 72 bp TGGAGTCTTCTTGCTCCGCCTGAGGAGGCAGGAACTTaGGTTTGCTTTTCGACCCGACTCCGGTTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: WSLLAPPEEAGT*VCFSTRLRFEE
Trigger: TTCTTCAAACCGGAGTCGGGTCGAAAAGCAAACTCAAGTTCCTGCCTCCTCAGGCGGAGCAAGAAGACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS TCA 72 bp CTTGTTTACTTTTCTGCGGAAGTCCAGGAGGGACCTTaGGGAGGAAGGGACTCCTCGGTCATACCAACTCAG +
Preference number: 6 (lower is better)
Translates to: LVYFSAEVQEGP*GGRDSSVIPTQ
Trigger: CTGAGTTGGTATGACCGAGGAGTCCCTTCCTCCTCAAGGTCCCTCCTGGACTTCCGCAGAAAAGTAAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
ENST00000648371.1
CDS CCA 72 bp GTTTTGGACATTGGCGCTCACTTTGAAGGTCACTGCTaGTCCGAGAACCTCTCTGTCTGTCACGATGTAGCC +
Preference number: 6 (lower is better)
Translates to: VLDIGAHFEGHC*SENLSVCHDVA
Trigger: GGCTACATCGTGACAGACAGAGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS CAA 72 bp AACTGTGGCCTTCTCCACATCCTCAGTGGTCACGTTTaGGACATTGGCGCTCACTTTGAAGGTCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: NCGLLHILSGHV*DIGAHFEGHCW
Trigger: CCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGAAGGCCACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CAA 72 bp TCCTCAGTGGTCACGTTTTGGACATTGGCGCTCACTTaGAAGGTCACTGCTGGTCCGAGAACCTCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: SSVVTFWTLALT*KVTAGPRTSLS
Trigger: AGACAGAGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS CAA 90 bp TTCTCCACATCCTCAGTGGTCACGTTTTGGACATTGGCGCTCACTTaGAAGGTCACTGCTGGTCCGAGAACCTCTCTGTCTGTCACGATG +
Preference number: 6 (lower is better)
Translates to: FSTSSVVTFWTLALT*KVTAGPRTSLSVTM
Trigger: CATCGTGACAGACAGAGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS CAA 90 bp TTTGTTGTCAACTGTGGCCTTCTCCACATCCTCAGTGGTCACGTTTaGGACATTGGCGCTCACTTTGAAGGTCACTGCTGGTCCGAGAAC +
Preference number: 6 (lower is better)
Translates to: FVVNCGLLHILSGHV*DIGAHFEGHCWSEN
Trigger: GTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTGACCACTGAGGATGTGGAGAAGGCCACAGTTGACAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS GCA 72 bp TGCTTCAGGACGCCTCAGGTAGGTTTTCGGGAGGTCTaGAAGTTCCTGGTCCATCACATACTGAGTATAGTC +
Preference number: 6 (lower is better)
Translates to: CFRTPQVGFREV*KFLVHHILSIV
Trigger: GACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCTGAGGCGTCCTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000404321.3
ENST00000409483.5
CDS GCA 72 bp CACGTTTTGGACATTGGCGCTCACTTTGAAGGTCACTaGTGGTCCGAGAACCTCTCTGTCTGTCACGATGTA +
Preference number: 6 (lower is better)
Translates to: HVLDIGAHFEGH*WSENLSVCHDV
Trigger: TACATCGTGACAGACAGAGAGGTTCTCGGACCAGCAGTGACCTTCAAAGTGAGCGCCAATGTCCAAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389413.7
CDS TCA 72 bp AGGAACTTGAGTTTGCTTTTCGACCCGACTCCGGTTTaGAGAATTTTCAGTCCAGAGGTTTCCTCCAGTTTG +
Preference number: 6 (lower is better)
Translates to: RNLSLLFDPTPV*RIFSPEVSSSL
Trigger: CAAACTGGAGGAAACCTCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTCGAAAAGCAAACTCAAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5
CDS CAA 72 bp CAGGAACTTGAGTTTGCTTTTCGACCCGACTCCGGTTaGAAGAATTTTCAGTCCAGAGGTTTCCTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: QELEFAFRPDSG*KNFQSRGFLQF
Trigger: AAACTGGAGGAAACCTCTGGACTGAAAATTCTTCAAACCGGAGTCGGGTCGAAAAGCAAACTCAAGTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389413.7
ENST00000389416.8
ENST00000389418.9
ENST00000409483.5