RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRN (Homo sapiens)

Ensembl gene IDs: ENSG00000054356

Ensembl transcript IDs: ENST00000295718.7, ENST00000409251.7, ENST00000412847.5, ENST00000423636.6, ENST00000440552.5, ENST00000442029.5, ENST00000443981.5, ENST00000446182.5, ENST00000451506.5, ENST00000460801.5, ENST00000462351.5, ENST00000476930.1, ENST00000477819.1, ENST00000486480.1, ENST00000489650.1, ENST00000497977.1, ENST00000606213.5

Found 631 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATaGCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCT +
Preference number: 1 (lower is better)
Translates to: SSWLQHPHGMPWALG*PRLWHARLGRRAPS
Trigger: AGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTaGGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: CPFLSSWLQHPHGMP*ALGCPRLWHARLGR
Trigger: CCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCGGACAGAGGCTGGGCTaGCCGCCAAGGGGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGGQRLG*PPRGPR
Trigger: CCTGGGGCCCCTTGGCGGGCAGCCCAGCCTCTGTCC...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR GCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGACAGAGGCTGGGCTaGCCGCCAAGGGGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWGQRLG*PPRGPR
Trigger: CCTGGGGCCCCTTGGCGGGCAGCCCAGCCTCTGTCC...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR GCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACGGACAGAGGCTGGGCTaGCCGCCAAGGGGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: ALACEAGQACPFWLSLPDGQRLG*PPRGPR
Trigger: CCTGGGGCCCCTTGGCGGGCAGCCCAGCCTCTGTCC...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTCTGGCATGCGAGGCTaGGCAGGCGTGCCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGSGMRG*AGVPLL
Trigger: CAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGA...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGGGATGCCCCAGGCTCTaGCATGCGAGGCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGGCPRL*HARLGR
Trigger: CCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCC...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGCCCAAGAGGTGGCTaGTGGGGCAGTGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: GSGMPQALACEAGQACPFCPRGG*WGSEEW
Trigger: CCACTCCTCACTGCCCCACCAGCCACCTCTTGGGCA...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR TCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTGGCTGGTGGGGCAGTaGGGAGTGGGTACACAGAGA +
Preference number: 2 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGWLVGQ*GVGTQR
Trigger: TCTCTGTGTACCCACTCCTCACTGCCCCACCAGCCA...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAAAGAGGGACAGAGGCTaGGCTGCCCGCCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGKRDRG*AARQGA
Trigger: GGCCCCTTGGCGGGCAGCCCAGCCTCTGTCCCTCTT...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR TCA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTGGCTGGTGGGGCAGTaGGGAGTGGGTACACAGAGA +
Preference number: 2 (lower is better)
Translates to: GMPQALACEAGQACPFWLWLVGQ*GVGTQR
Trigger: TCTCTGTGTACCCACTCCTCACTGCCCCACCAGCCA...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACAAGAGGGACAGAGGCTaGGCTGCCCGCCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: PGVATLHPILPYWSIGGHKRDRG*AARQGA
Trigger: GGCCCCTTGGCGGGCAGCCCAGCCTCTGTCCCTCTT...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR GCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCGGACAGAGGCTGGGCTaGCCGCCAAGGGGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: QARECRQEKALGRIATHVGQRLG*PPRGPR
Trigger: CCTGGGGCCCCTTGGCGGGCAGCCCAGCCTCTGTCC...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGAAGAGGGACAGAGGCTaGGCTGCCCGCCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: VATLHPILPYWSIGGHTQKRDRG*AARQGA
Trigger: GGCCCCTTGGCGGGCAGCCCAGCCTCTGTCCCTCTT...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR GCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACTCCTCTCCTCCTGGCTaGAGCACCCCCATGGGATGC +
Preference number: 2 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHSSPPG*STPMGC
Trigger: GCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGA...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR CCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGTGCCCAAGAGGTGGCTaGTGGGGCAGTGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: VATLHPILPYWSIGGHTQCPRGG*WGSEEW
Trigger: CCACTCCTCACTGCCCCACCAGCCACCTCTTGGGCA...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR CCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACATCTGGCATGCGAGGCTaGGCAGGCGTGCCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTSGMRG*AGVPLL
Trigger: CAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGA...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR GCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTCTCCTCCTGGCTaGAGCACCCCCATGGGATGC +
Preference number: 2 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMSSPPG*STPMGC
Trigger: GCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGA...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAAAGAGGGACAGAGGCTaGGCTGCCCGCCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGKRDRG*AARQGA
Trigger: GGCCCCTTGGCGGGCAGCCCAGCCTCTGTCCCTCTT...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGGATGCCCCAGGCTCTaGCATGCGAGGCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRGCPRL*HARLGR
Trigger: CCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCTGCCCAAGAGGTGGCTaGTGGGGCAGTGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: QARECRQEKALGRIATHVCPRGG*WGSEEW
Trigger: CCACTCCTCACTGCCCCACCAGCCACCTCTTGGGCA...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR TCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCTGGCTGGTGGGGCAGTaGGGAGTGGGTACACAGAGA +
Preference number: 2 (lower is better)
Translates to: QARECRQEKALGRIATHVWLVGQ*GVGTQR
Trigger: TCTCTGTGTACCCACTCCTCACTGCCCCACCAGCCA...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR GCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCAGCACCCCCATGGGATaGCCTGGGCTCTGGGATGCC +
Preference number: 2 (lower is better)
Translates to: PILPYWSIGGHTQMFRELSTPMG*PGLWDA
Trigger: GGCATCCCAGAGCCCAGGGCATCCCATGGGGGTGCT...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGTGGGGCAGTGAGGAGTaGGTACACAGAGATGCTCAC +
Preference number: 2 (lower is better)
Translates to: VATLHPILPYWSIGGHTQWGSEE*VHRDAH
Trigger: GTGAGCATCTCTGTGTACCCACTCCTCACTGCCCCA...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR CCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGATGCCCAAGAGGTGGCTaGTGGGGCAGTGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGCPRGG*WGSEEW
Trigger: CCACTCCTCACTGCCCCACCAGCCACCTCTTGGGCA...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp TGTCGGAGCACACCTTGTAAGCGTTGGAGAACTGGGGAGGTGACTTGCAAAAGGGCGCCTCGGAGCAAGTaGCTTCTCCTGTGGTCTCGC +
Preference number: 2 (lower is better)
Translates to: CRSTPCKRWRTGEVTCKRAPRSK*LLLWSR
Trigger: GCGAGACCACAGGAGAAGCCACTTGCTCCGAGGCGC...CCTTTTGCAAGTCACCTCCCCAGTTCTCCAACGCTTACAAGGTGTGCTCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606213.5
3UTR-3UTR GCA 90 bp TGGGACATGAGTTGTCGGAGCACACCTTGTAAGCGTTGGAGAACTGGGGAGGTGGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCTC +
Preference number: 2 (lower is better)
Translates to: WDMSCRSTPCKRWRTGEVGESRA*GQIDSL
Trigger: GAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACC...CACCTCCCCAGTTCTCCAACGCTTACAAGGTGTGCTCCGACAACTCATGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606213.5
3UTR-3UTR CCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCCAGGCGTGCCCCTTCTaGCTTTCCCTTCCTGACTCT +
Preference number: 2 (lower is better)
Translates to: RECRQEKALGRIATHVLSQACPF*LSLPDS
Trigger: AGAGTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTG...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGCAGGCGTGCCCCTTCTaGCTTTCCCTTCCTGACTCT +
Preference number: 2 (lower is better)
Translates to: FLEMFSCARRREVEQRMVQACPF*LSLPDS
Trigger: AGAGTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTG...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR CCA 90 bp CTCCATCTCCTGAGAGATCACATACTGGGTGAGGTCATCGTGCCAGGACAATCCACACCTTGTAAGCGTTaGAGAACTGGGGAGGTGACT +
Preference number: 2 (lower is better)
Translates to: LHLLRDHILGEVIVPGQSTPCKR*RTGEVT
Trigger: AGTCACCTCCCCAGTTCTCCAACGCTTACAAGGTGT...GGATTGTCCTGGCACGATGACCTCACCCAGTATGTGATCTCTCAGGAGATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606213.5
3UTR GCA 72 bp CATCCTGAATACAGACTTCCAGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCTCCCAGGCGCCTCGGAG +
Preference number: 3 (lower is better)
Translates to: HPEYRLPGESRA*GQIDSLPGASE
Trigger: CTCCGAGGCGCCTGGGAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTATTCAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606213.5
3UTR CCA 72 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTaGAGCATAGGGGGACACACACAGATGTTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: PGVATLHPILPY*SIGGHTQMFRE
Trigger: TTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
3UTR-3UTR CAA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTAGGCTCTGGGTAGAATaGCTACCCATGTCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPRLWVE*LPMSFP
Trigger: AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCT...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
3UTR-3UTR CAA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGTCTAGAAATGTTCTCTaGCGCCAGAAGGAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: FLEMFSCARRREVEQRMVSRNVL*RQKERG
Trigger: ACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGA...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCGCCTGCCAGAGGGGCTaGGGCGGGGCTTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPACQRG*GGACRS
Trigger: GGAGCGGCAAGCCCCGCCTCAGCCCCTCTGGCAGGC...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCGAGCCGCAGCGACGCTaGCGGGAGCCTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGEPQRR*REPARG
Trigger: CCCTCTGGCAGGCTCCCGCCAGCGTCGCTGCGGCTC...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCCCAGCAGGGGCCGCGTaGAGGCCGGTGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFPAGAA*RPVCPL
Trigger: CAGAGGGCACACCGGCCTCCACGCGGCCCCTGCTGG...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGGGACAGAGGCTGGGCTaGCCGCCAAGGGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGGQRLG*PPRGPR
Trigger: CCTGGGGCCCCTTGGCGGGCAGCCCAGCCTCTGTCC...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
72% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR GCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCCCTGGCCCTGCTGGGTaGTGGCAACTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFPGPAG*WQLLGQ
Trigger: CTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGG...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGCGCACCAGGACGGGGTaGTGCTGTGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGRTRTG*CCGSWG
Trigger: GCCCCAGCTCCCACAGCAGCACCCCGTCCTGGTGCG...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCGAGCCGCAGCGACGCTaGCGGGAGCCTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSEPQRR*REPARG
Trigger: CCCTCTGGCAGGCTCCCGCCAGCGTCGCTGCGGCTC...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCCCAGCAGGGGCCGCGTaGAGGCCGGTGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSPAGAA*RPVCPL
Trigger: CAGAGGGCACACCGGCCTCCACGCGGCCCCTGCTGG...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCAAGAGGGACAGAGGCTaGGCTGCCCGCCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGKRDRG*AARQGA
Trigger: GGCCCCTTGGCGGGCAGCCCAGCCTCTGTCCCTCTT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGCTGCTGGGCGGGCTaGGGGCTGTCCTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSCCWAG*GLSCHR
Trigger: ACGGTGGCAGGACAGCCCTCAGCCCGCCCAGCAGCA...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTCACTGCAGTGCACGATaGTGGGGCAGGAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GMPQALACEAGQACPFWLHCSAR*WGRSGP
Trigger: GGGGCCGCTCCTGCCCCATCATCGTGCACTGCAGTG...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCCGGCTGCTGCTCCCTTaGTCTGGCAGCCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGRLLLP*SGSLGT
Trigger: GGTGCCAAGGCTGCCAGAGCAAGGGAGCAGCAGCCG...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCCCTCTGCCCGGCTGCTaGTCCCTTGCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPPLPGC*SLALAA
Trigger: GGCTGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGG...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCGCTCTGCTGTGTCTCTaGCCTCCACCGGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFALLCL*PPPAPP
Trigger: TGGAGGGGCCGGTGGAGGGCAGAGACACAGCAGAGC...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCCAGCCCAGCCACACCTaGCAGGGCCACCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGQPSHT*QGHQSE
Trigger: CTCACTCTGGTGGCCCTGGCAGGTGTGGCTGGGCTG...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCAGCACCCCCATGGGATaGCCTGGGCTCTGGGATGCC +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFSTPMG*PGLWDA
Trigger: GGCATCCCAGAGCCCAGGGCATCCCATGGGGGTGCT...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCGAGGCGGGGTCTACATaGCCCTCTCGCTGCAACGCG +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFEAGST*PSRCNA
Trigger: CGCGTTGCAGCGAGAGGGGCATGTAGACCCCGCCTC...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTGCTCTGGCAGCCTTaGCACCCTGGCCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGLLWQP*HPGPAG
Trigger: CCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAA...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGGCTGTCCTGCCACCGTaGGCTGGCTCTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGAVLPP*AGSGPV
Trigger: CACTGGGCCAGAGCCAGCCCACGGTGGCAGGACAGC...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCCAGCAGGGGCCGCGTaGAGGCCGGTGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWPAGAA*RPVCPL
Trigger: CAGAGGGCACACCGGCCTCCACGCGGCCCCTGCTGG...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCAGGGGGCCGACACTaGCCATCCCTGGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWAGGRH*PSLGSP
Trigger: AGGGCTCCCCAGGGATGGTCAGTGTCGGCCCCCTGC...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATGCTGCTGGGCGGGCTaGGGGCTGTCCTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGCCWAG*GLSCHR
Trigger: ACGGTGGCAGGACAGCCCTCAGCCCGCCCAGCAGCA...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCCGGCTGCTGCTCCCTTaGTCTGGCAGCCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPRLLLP*SGSLGT
Trigger: GGTGCCAAGGCTGCCAGAGCAAGGGAGCAGCAGCCG...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCCCTCTGCCCGGCTGCTaGTCCCTTGCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSPLPGC*SLALAA
Trigger: GGCTGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGG...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGACAGCGGCCAGCCTCTaGAGAGCCGCATCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGTAASL*RAASGC
Trigger: GCAGCCAGATGCGGCTCTGCAGAGGCTGGCCGCTGT...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTGCTCTGCTGTGTCTCTaGCCTCCACCGGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GMPQALACEAGQACPFWLALLCL*PPPAPP
Trigger: TGGAGGGGCCGGTGGAGGGCAGAGACACAGCAGAGC...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGGCGCTCCTTGTCTTaGTGCCGCGCATGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGRRSLS*CRACCR
Trigger: GCGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCT...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCGGCCGGTGTGCCCTCTaGCGGCCAGCTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSGRCAL*RPAEEV
Trigger: CACTTCCTCAGCTGGCCGGCAGAGGGCACACCGGCC...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTCCTCTCCTCCTGGCTaGAGCACCCCCATGGGATGC +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFSSPPG*STPMGC
Trigger: GCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGA...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCGGCCCTGCTGGGTGCTaGCAACTCCTGGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFGPAGC*QLLGQI
Trigger: TATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCC...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCACAGCGGGCCCTGCGTaGCTATGTAGGCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGTAGPA*LCRLAS
Trigger: GGATGCCAGCCTACATAGCCACGCAGGGCCCGCTGT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCGGCCAGCTGAGGAAGTaGAACTGCGTGAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGGQLRK*NCVSVR
Trigger: GCGCACGCTCACGCAGTTCCACTTCCTCAGCTGGCC...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATCCAGCAGGGGCCGCGTaGAGGCCGGTGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDPAGAA*RPVCPL
Trigger: CAGAGGGCACACCGGCCTCCACGCGGCCCCTGCTGG...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCACAAGGCCAGGCCGCTaGTCACGGACATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGTRPGR*SRTCSR
Trigger: CCTGGAGCATGTCCGTGACCAGCGGCCTGGCCTTGT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCAAGAGGGACAGAGGCTaGGCTGCCCGCCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSKRDRG*AARQGA
Trigger: GGCCCCTTGGCGGGCAGCCCAGCCTCTGTCCCTCTT...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCAGGTTGAGCAGCGCATaGTGGGAGGGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGRLSSA*WEGGGR
Trigger: CCTCCCACCACCCTCCCACCATGCGCTGCTCAACCT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCAGGGGGCCGACACTaGCCATCCCTGGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALAGGRH*PSLGSP
Trigger: AGGGCTCCCCAGGGATGGTCAGTGTCGGCCCCCTGC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGTGCTGCTGGGCGGGCTaGGGGCTGTCCTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALCCWAG*GLSCHR
Trigger: ACGGTGGCAGGACAGCCCTCAGCCCGCCCAGCAGCA...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAGCCGGATGCGGAAGGTaGGGGCTGGTCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGAGCGR*GLVPPH
Trigger: GTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGC...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000423636.6
CDS-3UTR TCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGGCCGGATGCGGAAGGTaGGGGCTGGTCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLAGCGR*GLVPPH
Trigger: GTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGC...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000423636.6
CDS-3UTR TCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGCACTGCAGTGCACGATaGTGGGGCAGGAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLHCSAR*WGRSGP
Trigger: GGGGCCGCTCCTGCCCCATCATCGTGCACTGCAGTG...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTGGTGGGGCAGTaGGGAGTGGGTACACAGAGA +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFWLVGQ*GVGTQR
Trigger: TCTCTGTGTACCCACTCCTCACTGCCCCACCAGCCA...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTAGTCCTCTGCCCGGCTaGTGCTCCCTTGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GMPQALACEAGQACPFWLSPLPG*CSLALA
Trigger: TGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGGACT...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCCTCTGGGGAGTCCTCTaGCCGGCTGCTGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSLWGVL*PAAAPL
Trigger: CAAGGGAGCAGCAGCCGGGCAGAGGACTCCCCAGAG...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCAGGCGCTCCTTGTCTTaGTGCCGCGCATGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSRRSLS*CRACCR
Trigger: GCGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCT...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCATGTTGCCCTCCCCCTaGGCGGTGGCACAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGMLPSP*AVAQVF
Trigger: AAACACCTGTGCCACCGCGCAGGGGGAGGGCAACAT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGGCCGGTGTGCCCTCTaGCGGCCAGCTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGGRCAL*RPAEEV
Trigger: CACTTCCTCAGCTGGCCGGCAGAGGGCACACCGGCC...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCAGCACCCCCATGGGATaGCCTGGGCTCTGGGATGCC +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSSTPMG*PGLWDA
Trigger: GGCATCCCAGAGCCCAGGGCATCCCATGGGGGTGCT...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTCCTCTCCTCCTGGCTaGAGCACCCCCATGGGATGC +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPSSPPG*STPMGC
Trigger: GCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGA...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCAGCCCTCTGAGACCCTaGAGCCATCACGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGSPLRP*SHHGSQ
Trigger: TTGGCTCCCGTGATGGCTCCAGGGTCTCAGAGGGCT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCGTGTCACAGGGGGTCTaGCAGCTTTGGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFVSQGV*QLWEAQ
Trigger: CTGAGCCTCCCAAAGCTGCCAGACCCCCTGTGACAC...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACGCTGTCCTGCCACCGTaGGCTGGCTCTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDAVLPP*AGSGPV
Trigger: CACTGGGCCAGAGCCAGCCCACGGTGGCAGGACAGC...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAGCTGTCCTGCCACCGTaGGCTGGCTCTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGAVLPP*AGSGPV
Trigger: CACTGGGCCAGAGCCAGCCCACGGTGGCAGGACAGC...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAAGGTAGTGTCACCATaGGCCCCCTCAGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGKVVSP*APSGPR
Trigger: CCTGGGGCCTGAGGGGGCCCATGGTGACACTACCTT...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCATGTCCATGTTGGCTTaGGCCGGCTCCTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFMSMLA*AGSSHQ
Trigger: CTGGTGCGAGGAGCCGGCCCAAGCCAACATGGACAT...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCGCCAGAAGTCTGCGATaGTATGGGACAGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGARSLR*YGTAGP
Trigger: AGGGCCCGCTGTCCCATACCATCGCAGACTTCTGGC...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFGGTLI*PVAVTL
Trigger: CAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCC...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGAAGAGGGACAGAGGCTaGGCTGCCCGCCAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLKRDRG*AARQGA
Trigger: GGCCCCTTGGCGGGCAGCCCAGCCTCTGTCCCTCTT...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTGCCCAAGAGGTGGCTaGTGGGGCAGTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPCPRGG*WGSEEW
Trigger: CCACTCCTCACTGCCCCACCAGCCACCTCTTGGGCA...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCTCTGGCATGCGAGGCTaGGCAGGCGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSSGMRG*AGVPLL
Trigger: CAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGA...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGATGCCCCAGGCTCTaGCATGCGAGGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWGCPRL*HARLGR
Trigger: CCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCC...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACGCAGGGGGCCGACACTaGCCATCCCTGGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHAGGRH*PSLGSP
Trigger: AGGGCTCCCCAGGGATGGTCAGTGTCGGCCCCCTGC...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGCACACTGCTCACCCGTaGAGGCTCCGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLHTAHP*RLRWTL
Trigger: GAGGGTCCACCGGAGCCTTCACGGGTGAGCAGTGTG...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACCACACTGCTCACCCGTaGAGGCTCCGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDHTAHP*RLRWTL
Trigger: GAGGGTCCACCGGAGCCTTCACGGGTGAGCAGTGTG...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACCTGGGCTGCGTCGCTaGACTGGGAGGACACACTGC +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGPGLRR*TGRTHC
Trigger: GCAGTGTGTCCTCCCAGTTCAGCGACGCAGCCCAGG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATCACTGCAGTGCACGATaGTGGGGCAGGAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDHCSAR*WGRSGP
Trigger: GGGGCCGCTCCTGCCCCATCATCGTGCACTGCAGTG...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCCAGAAGGAGAGAGGTTaGGCAGCGCATGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPQKERG*AAHGGR
Trigger: CCTCCCACCATGCGCTGCTCAACCTCTCTCCTTCTG...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR GCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCACCAGGTCTCTTGGGTaGCAAGCCAGACCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFTRSLG*QARPVP
Trigger: AGGGACAGGTCTGGCTTGGCACCCAAGAGACCTGGT...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCCCCCAGCTCCACCTTTaGCCACTGGTGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGPQLHL*PLVVVE
Trigger: TTCCACAACCACCAGTGGGCAAAGGTGGAGCTGGGG...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGCCTGGCCCTGCTGGGTaGTGGCAACTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALPGPAG*WQLLGQ
Trigger: CTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGG...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACGGCTGCTGCTCCCTTaGTCTGGCAGCCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGRLLLP*SGSLGT
Trigger: GGTGCCAAGGCTGCCAGAGCAAGGGAGCAGCAGCCG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACTCTGGGGAGTCCTCTaGCCGGCTGCTGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGLWGVL*PAAAPL
Trigger: CAAGGGAGCAGCAGCCGGGCAGAGGACTCCCCAGAG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCGCGGGCTGGAAGCTCTaGTGTGTCTCTGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSAGWKL*CVSALH
Trigger: GTGGAGGGCAGAGACACAGCAGAGCTTCCAGCCCGC...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCGGGAAGGACTGCAGCTaGCTCCTCCCTCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSGKDCS*LLPLSH
Trigger: GTGGGACAGAGGGAGGAGGCAGCTGCAGTCCTTCCC...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCTGCTGCCGCGCATGCTaGCGCACACACAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSCCRAC*RTHRAT
Trigger: TGTGGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCA...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGCTGCCGCGCATGCTaGCGCACACACAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSCCRAC*RTHRAT
Trigger: TGTGGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCA...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGCCTCCCAGGCGCCTCGGAGCAAGTGGCTTCTCCTGTGGTCTCGCAGCCGGTCGTCCCTCTGCCCACATaGACCCCGTGTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SLPGASEQVASPVVSQPVVPLPT*TPCPSP
Trigger: GGGAGAAGGACACGGGGTGCATGTGGGCAGAGGGAC...GACCGGCTGCGAGACCACAGGAGAAGCCACTTGCTCCGAGGCGCCTGGGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCCAGGACCAGGTCTCTTaGGTGCCAAGCCAGACCTGT +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFQDQVS*VPSQTC
Trigger: ACAGGTCTGGCTTGGCACCCAAGAGACCTGGTCCTG...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCCAGGGGCGGAGCCAGTaGGGATGTCCTGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFQGRSQ*GCPVKA
Trigger: TGCTTTTACAGGACATCCCCACTGGCTCCGCCCCTG...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGTTGCTCTGGCAGCCTTaGCACCCTGGCCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLLLWQP*HPGPAG
Trigger: CCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAA...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGCTGCTCCCTTGCTCTaGCAGCCTTGGCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGAAPLL*QPWHPG
Trigger: GCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGC...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAGCTGCTCCCTTGCTCTaGCAGCCTTGGCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGAAPLL*QPWHPG
Trigger: GCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGC...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTGGGCTTGGCACCTGCTaGACTTCACTGGAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GMPQALACEAGQACPFWLGLGTC*TSLEVG
Trigger: CCCTACCTCCAGTGAAGTCCAGCAGGTGCCAAGCCC...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGGGGGTCTGGCAGCTTTaGGAGGCTCAGAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGGVWQL*EAQRRQ
Trigger: CTGTCTCCTCTGAGCCTCCCAAAGCTGCCAGACCCC...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
67% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCGTGGCCATGTGCTaGCGGCACAGGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPFVAMC*RHRSWY
Trigger: GTACCAGGACCTGTGCCGCCAGCACATGGCCACGAA...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCGCTGCGTCGCTGAACTaGGAGGACACACTGCTCACC +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPAASLN*EDTLLT
Trigger: GGTGAGCAGTGTGTCCTCCCAGTTCAGCGACGCAGC...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGGGAGCCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGCCTGCCACTCCTTaGCAAGGCGGTCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: GGAGCGDPPPHSSILEHRGPATP*QGGPGS
Trigger: GGAACCGGGACCGCCTTGCCAAGGAGTGGCAGGCCC...CCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATGGGCCTGCCACTCCTTaGCAAGGCGGTCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDGPATP*QGGPGS
Trigger: GGAACCGGGACCGCCTTGCCAAGGAGTGGCAGGCCC...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCCTCCCCCTGCGCGGTaGCACAGGTGTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGPPPAR*HRCLAL
Trigger: CAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGG...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACCCTCCCCCTGCGCGGTaGCACAGGTGTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDPPPAR*HRCLAL
Trigger: CAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGG...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPGGTLI*PVAVTL
Trigger: CAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCC...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATCTGGCATGCGAGGCTaGGCAGGCGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGSGMRG*AGVPLL
Trigger: CAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGA...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGTCTGGCATGCGAGGCTaGGCAGGCGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLSGMRG*AGVPLL
Trigger: CAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGA...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGGTTCGTAACTCAGTaGAGGGTGGGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGRFVTQ*RVGRLW
Trigger: CCACAGCCTCCCCACCCTTCACTGAGTTACGAACCT...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCAGGTTCGTAACTCAGTaGAGGGTGGGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPRFVTQ*RVGRLW
Trigger: CCACAGCCTCCCCACCCTTCACTGAGTTACGAACCT...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCGGTTCCGCAGGTaGTCCTCCATGTATGCCAGA +
Preference number: 4 (lower is better)
Translates to: GMPQALACEAGQACPFWLSRFRR*SSMYAR
Trigger: TCTGGCATACATGGAGGATCACCTGCGGAACCGGGA...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGTCCCGGTTCCGCAGGTaGTCCTCCATGTATGCCAGA +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGSRFRR*SSMYAR
Trigger: TCTGGCATACATGGAGGATCACCTGCGGAACCGGGA...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCAGCGGTCACACTGCTTaGCACCATCCTCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSSGHTA*HHPPPA
Trigger: CGCTGGTGGAGGATGGTGTCAAGCAGTGTGACCGCT...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGGCTGGTGGGGCAGTaGGGAGTGGGTACACAGAGA +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSWLVGQ*GVGTQR
Trigger: TCTCTGTGTACCCACTCCTCACTGCCCCACCAGCCA...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGTTGGCACCCTGGCCCTaGTGGGTGCTGGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWLAPWP*WVLATP
Trigger: AGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAA...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCAGGTTCTGCTCATTGTaGCGGATGCGGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGRFCSL*RMRKVR
Trigger: CCTCACCTTCCGCATCCGGCACAATGAGCAGAACCT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCGCCAAAGACAGGTTCTaGTCATTGTGCCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGAKDRF*SLCRMR
Trigger: CCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGC...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGTGCTGCCGCGCATGCTaGCGCACACACAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLCCRAC*RTHRAT
Trigger: TGTGGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCA...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGTCTTGCTGCCGCGCATaGTGCCGCACACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWSCCRA*CRTHRA
Trigger: GGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCAAGA...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGACTTCGTGGCCATGTaGTGGCGGCACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGDFVAM*WRHRSW
Trigger: CCAGGACCTGTGCCGCCAGCACATGGCCACGAAGTC...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACGGCCGGTGTGCCCTCTaGCGGCCAGCTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHGRCAL*RPAEEV
Trigger: CACTTCCTCAGCTGGCCGGCAGAGGGCACACCGGCC...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR GCA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTACTTGTTCACCTTCCTaGGGAAGTCCAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GMPQALACEAGQACPFWLTCSPS*GSPAGA
Trigger: GGCCCCTGCTGGACTTCCGCAGGAAGGTGAACAAGT...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACCGCTGGTCACGGACATaGTCCAGGGTGGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDRWSRT*SRVAAM
Trigger: CATCGCTGCCACCCTGGAGCATGTCCGTGACCAGCG...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTCAAATAGACAGCCGTaGGCACTAACGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGSNRQP*ALTALQ
Trigger: CTGCAGCGCCGTTAGTGCCCACGGCTGTCTATTTGA...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGCCCCACTCCCACCTaGCACTGCCCAAACAAGCCA +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSCPTPT*HCPNKP
Trigger: TGGCTTGTTTGGGCAGTGCCAGGTGGGAGTGGGGCA...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATTTGCTCTGGCAGCCTTaGCACCCTGGCCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDLLWQP*HPGPAG
Trigger: CCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAA...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCTGCTCCCTTGCTCTaGCAGCCTTGGCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALAAPLL*QPWHPG
Trigger: GCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCCTTCTCATAGCCCTCTaGGGAGTCCTCTGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSLLIAL*GVLCPA
Trigger: AGCCGGGCAGAGGACTCCCCAGAGGGCTATGAGAAG...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGATCTGGCTGCACAGCTaGGGAAGCAGGCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGIWLHS*GSRLLS
Trigger: GGAGAGAAGCCTGCTTCCCCAGCTGTGCAGCCAGAT...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACTGCAGAGCCGCATCTaGCTGCACAGCTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGLQSRI*LHSWGS
Trigger: GCTTCCCCAGCTGTGCAGCCAGATGCGGCTCTGCAG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCAGAGGAGACAGGGCTTaGCACCTGCTGGACTTCACT +
Preference number: 4 (lower is better)
Translates to: GSGMPQALACEAGQACPFRGDRA*HLLDFT
Trigger: AGTGAAGTCCAGCAGGTGCCAAGCCCTGTCTCCTCT...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCAGAGGAGACAGGGCTTaGCACCTGCTGGACTTCACT +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGRGDRA*HLLDFT
Trigger: AGTGAAGTCCAGCAGGTGCCAAGCCCTGTCTCCTCT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCGGTGGCACAGGTGTTTaGCTCTGCTTGGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGGGTGV*LCLVGT
Trigger: TGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACC...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAACAGCGGGCCCTGCGTaGCTATGTAGGCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGTAGPA*LCRLAS
Trigger: GGATGCCAGCCTACATAGCCACGCAGGGCCCGCTGT...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAGGCCAGCTGAGGAAGTaGAACTGCGTGAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGGQLRK*NCVSVR
Trigger: GCGCACGCTCACGCAGTTCCACTTCCTCAGCTGGCC...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACAAGGCCAGGCCGCTaGTCACGGACATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGTRPGR*SRTCSR
Trigger: CCTGGAGCATGTCCGTGACCAGCGGCCTGGCCTTGT...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTGGGGCAGTGAGGAGTaGGTACACAGAGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGWGSEE*VHRDAH
Trigger: GTGAGCATCTCTGTGTACCCACTCCTCACTGCCCCA...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACTGCCCAAGAGGTGGCTaGTGGGGCAGTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDCPRGG*WGSEEW
Trigger: CCACTCCTCACTGCCCCACCAGCCACCTCTTGGGCA...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGCAGGCGTGCCCCTTCTaGCTTTCCCTTCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGQACPF*LSLPDS
Trigger: AGAGTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTG...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGAGGTTGAGCAGCGCATaGTGGGAGGGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLRLSSA*WEGGGR
Trigger: CCTCCCACCACCCTCCCACCATGCGCTGCTCAACCT...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGGCGCCTCGGAGCAAGTaGCTTCTCCTGTGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLAPRSK*LLLWSR
Trigger: GCGAGACCACAGGAGAAGCCACTTGCTCCGAGGCGC...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423636.6
CDS-3UTR TCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACCAGAAGGAGAGAGGTTaGGCAGCGCATGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDQKERG*AAHGGR
Trigger: CCTCCCACCATGCGCTGCTCAACCTCTCTCCTTCTG...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACAGAAGGAGAGAGGTTaGGCAGCGCATGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGQKERG*AAHGGR
Trigger: CCTCCCACCATGCGCTGCTCAACCTCTCTCCTTCTG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGAGTCCTCTGCCCGGCTaGTGCTCCCTTGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALSPLPG*CSLALA
Trigger: TGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGGACT...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGAGAGCCGCATCTGGCTaGACAGCTGGGGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALRAASG*TAGEAG
Trigger: GCCTGCTTCCCCAGCTGTGCAGCCAGATGCGGCTCT...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGGGGAGCCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGAAGGACTGCAGCTaGCTCCTCCCTCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GGAGCGDPPPHSSILEHRGKDCS*LLPLSH
Trigger: GTGGGACAGAGGGAGGAGGCAGCTGCAGTCCTTCCC...CCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGCGCTCCTTGTCTTGCTaGCGCGCATGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALRSLSC*RACCRT
Trigger: TGTGCGGCAGCATGCGCGGCAGCAAGACAAGGAGCG...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAATGTTGCCCTCCCCCTaGGCGGTGGCACAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGMLPSP*AVAQVF
Trigger: AAACACCTGTGCCACCGCGCAGGGGGAGGGCAACAT...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCGCACCATCACTGCAGTaGACGATGATGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSAPSLQ*TMMGQE
Trigger: CTCCTGCCCCATCATCGTGCACTGCAGTGATGGTGC...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR GCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGGACAGAGGCTGGGCTaGCCGCCAAGGGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDGQRLG*PPRGPR
Trigger: CCTGGGGCCCCTTGGCGGGCAGCCCAGCCTCTGTCC...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR GCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGGGACAGAGGCTGGGCTaGCCGCCAAGGGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMGQRLG*PPRGPR
Trigger: CCTGGGGCCCCTTGGCGGGCAGCCCAGCCTCTGTCC...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACAGCACCCCCATGGGATaGCCTGGGCTCTGGGATGCC +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHSTPMG*PGLWDA
Trigger: GGCATCCCAGAGCCCAGGGCATCCCATGGGGGTGCT...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGAGCCCTCTGAGACCCTaGAGCCATCACGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLSPLRP*SHHGSQ
Trigger: TTGGCTCCCGTGATGGCTCCAGGGTCTCAGAGGGCT...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAGGGCTTGGCACCTGCTaGACTTCACTGGAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGGLGTC*TSLEVG
Trigger: CCCTACCTCCAGTGAAGTCCAGCAGGTGCCAAGCCC...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGGCTTGGCACCTGCTaGACTTCACTGGAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWGLGTC*TSLEVG
Trigger: CCCTACCTCCAGTGAAGTCCAGCAGGTGCCAAGCCC...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAGGGGTCTGGCAGCTTTaGGAGGCTCAGAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGGVWQL*EAQRRQ
Trigger: CTGTCTCCTCTGAGCCTCCCAAAGCTGCCAGACCCC...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAACCGTGGGCTGGCTCTaGCCCAGTGGGCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGTVGWL*PSGLFF
Trigger: GAAGAAAAGCCCACTGGGCCAGAGCCAGCCCACGGT...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGGGAGCCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGCAGCACTGAGCGCATaGGTGAGGTGCTGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GGAGCGDPPPHSSILEHRAALSA*VRCCAQ
Trigger: CTGCGCACAGCACCTCACCCATGCGCTCAGTGCTGC...CCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATGCAGCACTGAGCGCATaGGTGAGGTGCTGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDAALSA*VRCCAQ
Trigger: CTGCGCACAGCACCTCACCCATGCGCTCAGTGCTGC...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGTTCGTGGCCATGTGCTaGCGGCACAGGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGFVAMC*RHRSWY
Trigger: GTACCAGGACCTGTGCCGCCAGCACATGGCCACGAA...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGCTGCGTCGCTGAACTaGGAGGACACACTGCTCACC +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGAASLN*EDTLLT
Trigger: GGTGAGCAGTGTGTCCTCCCAGTTCAGCGACGCAGC...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGGCTGCGTCGCTGAACTaGGAGGACACACTGCTCACC +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLAASLN*EDTLLT
Trigger: GGTGAGCAGTGTGTCCTCCCAGTTCAGCGACGCAGC...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATACAGCGGGCCCTGCGTaGCTATGTAGGCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDTAGPA*LCRLAS
Trigger: GGATGCCAGCCTACATAGCCACGCAGGGCCCGCTGT...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGAAGTCTGCGATGGTATaGGACAGCGGGCCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLKSAMV*DSGPCV
Trigger: CACGCAGGGCCCGCTGTCCCATACCATCGCAGACTT...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCCAGAAGTCTGCGATaGTATGGGACAGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWARSLR*YGTAGP
Trigger: AGGGCCCGCTGTCCCATACCATCGCAGACTTCTGGC...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCCAGCTGAGGAAGTaGAACTGCGTGAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALGQLRK*NCVSVR
Trigger: GCGCACGCTCACGCAGTTCCACTTCCTCAGCTGGCC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGACAAGGCCAGGCCGCTaGTCACGGACATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALTRPGR*SRTCSR
Trigger: CCTGGAGCATGTCCGTGACCAGCGGCCTGGCCTTGT...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACGGATGCCCCAGGCTCTaGCATGCGAGGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHGCPRL*HARLGR
Trigger: CCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCC...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp CCAGGTGAGAGCAGAGCCTGCGGTCAAATAGACAGCCTCCCAGGCGCCTCGGAGGCGCCTCGGAGCAAGTaGCTTCTCCTGTGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: PGESRACGQIDSLPGASEAPRSK*LLLWSR
Trigger: GCGAGACCACAGGAGAAGCCACTTGCTCCGAGGCGC...CTCCGAGGCGCCTGGGAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR TCA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTATGCGCTCCATCTCCTaGGAGATCACATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: GMPQALACEAGQACPFWLMRSIS*EITYWV
Trigger: CACCCAGTATGTGATCTCTCAGGAGATGGAGCGCAT...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCGGGGCTTCTGATCAGTaGCGATGTAGCCATATTCCT +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGGASDQ*RCSHIP
Trigger: AGGAATATGGCTACATCGTCACTGATCAGAAGCCCC...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACTCCCGGTTCCGCAGGTaGTCCTCCATGTATGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDSRFRR*SSMYAR
Trigger: TCTGGCATACATGGAGGATCACCTGCGGAACCGGGA...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GGGGGAGCCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGTGGCTGGTGGGGCAGTaGGGAGTGGGTACACAGAGA +
Preference number: 4 (lower is better)
Translates to: GGAGCGDPPPHSSILEHRWLVGQ*GVGTQR
Trigger: TCTCTGTGTACCCACTCCTCACTGCCCCACCAGCCA...CCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACGCCGGATGCGGAAGGTaGGGGCTGGTCCCACCACAT +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHAGCGR*GLVPPH
Trigger: ATGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGC...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS-3UTR GCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACTTGGCACCCTGGCCCTaGTGGGTGCTGGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHLAPWP*WVLATP
Trigger: AGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAA...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCAGGTTCTGCTCATTGTaGCGGATGCGGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSRFCSL*RMRKVR
Trigger: CCTCACCTTCCGCATCCGGCACAATGAGCAGAACCT...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCGCCAAAGACAGGTTCTaGTCATTGTGCCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSAKDRF*SLCRMR
Trigger: CCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGC...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCTCCGGTGGACCCTCTaGCCGGTTGAACAAGGACTT +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWLRWTL*PVEQGL
Trigger: AAGTCCTTGTTCAACCGGGCAGAGGGTCCACCGGAG...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGATGTTGCCCTCCCCCTaGGCGGTGGCACAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALMLPSP*AVAQVF
Trigger: AAACACCTGTGCCACCGCGCAGGGGGAGGGCAACAT...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACGGCATCCGAGGGTCATaGTCAATAATGGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDGIRGS*SIMGLA
Trigger: CGCCAGCCCCATTATTGAGCATGACCCTCGGATGCC...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACGCACCATCACTGCAGTaGACGATGATGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDAPSLQ*TMMGQE
Trigger: CTCCTGCCCCATCATCGTGCACTGCAGTGATGGTGC...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCCTCCTTCACTCCTTTTaGCATGCGGTTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGLLHSF*HAVQDH
Trigger: ATGGTCCTGAACCGCATGGCAAAAGGAGTGAAGGAG...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACCGCTGGTCACGGACATaGTCCAGGGTGGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHRWSRT*SRVAAM
Trigger: CATCGCTGCCACCCTGGAGCATGTCCGTGACCAGCG...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCACACCTTGTAAGCGTTaGAGAACTGGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGTPCKR*RTGEVT
Trigger: AGTCACCTCCCCAGTTCTCCAACGCTTACAAGGTGT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGTGCCAGGACAATCCTTaGGACATGAGTTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGCQDNP*DMSCRS
Trigger: GCTCCGACAACTCATGTCCCAAGGATTGTCCTGGCA...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGCAGGACCAGGTCTCTTaGGTGCCAAGCCAGACCTGT +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLQDQVS*VPSQTC
Trigger: ACAGGTCTGGCTTGGCACCCAAGAGACCTGGTCCTG...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACTTCTTCCTGCACCCTTaGGCAGTAGCTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDFFLHP*AVAAAG
Trigger: CCCTGCTGCAGCTACTGCCCAAGGGTGCAGGAAGAA...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACTGGGGTGTCCAGGCATaGGGGATGTGCGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHWGVQA*GMCGLE
Trigger: TTCCAGCCCGCACATCCCCCATGCCTGGACACCCCA...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATGGGGTCTGGCAGCTTTaGGAGGCTCAGAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDGVWQL*EAQRRQ
Trigger: CTGTCTCCTCTGAGCCTCCCAAAGCTGCCAGACCCC...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTGGCGGCACAGGTCCTaGTACTCAAAGGTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPWRHRS*YSKVVS
Trigger: TGACACTACCTTTGAGTACCAGGACCTGTGCCGCCA...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCGTGGCTATGTAGGCTaGCATCCGAGGGTCATGCTC +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGRGYVG*HPRVML
Trigger: GAGCATGACCCTCGGATGCCAGCCTACATAGCCACG...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALGGTLI*PVAVTL
Trigger: CAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp AGCCTCCCAGGCGCCTCGGAGCAAGTGGCTTCTCCTGTGGTCTCGCAGCCGGTCAAGTGGCTTCTCCTGTaGTCTCGCAGCCGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SLPGASEQVASPVVSQPVKWLLL*SRSRSL
Trigger: TAGAGACCGGCTGCGAGACCACAGGAGAAGCCACTT...GACCGGCTGCGAGACCACAGGAGAAGCCACTTGCTCCGAGGCGCCTGGGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR TCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATCCCTGGGGAGCCCTCTaGGACCCTGGAGCCATCACG +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDPWGAL*DPGAIT
Trigger: CGTGATGGCTCCAGGGTCTCAGAGGGCTCCCCAGGG...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGCCCTGGGGAGCCCTCTaGGACCCTGGAGCCATCACG +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMPWGAL*DPGAIT
Trigger: CGTGATGGCTCCAGGGTCTCAGAGGGCTCCCCAGGG...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCAGCAGCCCAGAGTCTTaGAAAAGCTGGGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSSSPES*KSWAGE
Trigger: TTCACCTGCCCAGCTTTTTCAAGACTCTGGGCTGCT...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGTGGTCCCCAAATATaGCCTTGGAGGCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWGGPQI*PWRQFC
Trigger: GCAGAACTGCCTCCAAGGGCATATTTGGGGACCACC...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATCCTCTGCCCGGCTGCTaGTCCCTTGCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDPLPGC*SLALAA
Trigger: GGCTGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGG...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAACAGGGCTTGGCACCTaGTGGACTTCACTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGTGLGT*WTSLEV
Trigger: TACCTCCAGTGAAGTCCAGCAGGTGCCAAGCCCTGT...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACAGGGCTTGGCACCTaGTGGACTTCACTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGTGLGT*WTSLEV
Trigger: TACCTCCAGTGAAGTCCAGCAGGTGCCAAGCCCTGT...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGAGGTTCTGCTCATTGTaGCGGATGCGGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWRFCSL*RMRKVR
Trigger: CCTCACCTTCCGCATCCGGCACAATGAGCAGAACCT...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACAGGTGTTTGGCTCTaGTTGGTAGGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGTGVWL*LVGTEG
Trigger: GCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGT...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCCGCTCCGAGAAGGGCTaGTCTCCACCTTCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSRSEKG*SPPSVL
Trigger: TAAAACTGAAGGTGGAGAGCAGCCCTTCTCGGAGCG...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCATCCGAGGGTCATaGTCAATAATGGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALGIRGS*SIMGLA
Trigger: CGCCAGCCCCATTATTGAGCATGACCCTCGGATGCC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATGCACCATCACTGCAGTaGACGATGATGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDAPSLQ*TMMGQE
Trigger: CTCCTGCCCCATCATCGTGCACTGCAGTGATGGTGC...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATGTCTCTAAGTCCCTCTaGCCACATGCACCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDVSKSL*PHAPRV
Trigger: GACACGGGGTGCATGTGGGCAGAGGGACTTAGAGAC...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423636.6
CDS-3UTR GCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTCAAACTGGTCCTTTTaGCATGCGGTTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGSNWSF*HAVQDH
Trigger: ATGGTCCTGAACCGCATGGCAAAAGGACCAGTTTGA...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443981.5
CDS-3UTR CCA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCACACCTTGTAAGCGTTaGAGAACTGGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPTPCKR*RTGEVT
Trigger: AGTCACCTCCCCAGTTCTCCAACGCTTACAAGGTGT...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACCTTTGCCCACTGGTaGTTGTGGAAGCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLTFAHW*LWKPML
Trigger: CAGCATCGGCTTCCACAACCACCAGTGGGCAAAGGT...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGTCCACCTTTGCCCACTaGTGGTTGTGGAAGCCGATG +
Preference number: 4 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWSTFAH*WLWKPM
Trigger: CATCGGCTTCCACAACCACCAGTGGGCAAAGGTGGA...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATATCTGGCTGCACAGCTaGGGAAGCAGGCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDIWLHS*GSRLLS
Trigger: GGAGAGAAGCCTGCTTCCCCAGCTGTGCAGCCAGAT...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGATCTGGCTGCACAGCTaGGGAAGCAGGCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALIWLHS*GSRLLS
Trigger: GGAGAGAAGCCTGCTTCCCCAGCTGTGCAGCCAGAT...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATTTCTTCCTGCACCCTTaGGCAGTAGCTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDFFLHP*AVAAAG
Trigger: CCCTGCTGCAGCTACTGCCCAAGGGTGCAGGAAGAA...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACTGGGGTGTCCAGGCATaGGGGATGTGCGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHWGVQA*GMCGLE
Trigger: TTCCAGCCCGCACATCCCCCATGCCTGGACACCCCA...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCGGAAGGTGAGGGCTaGTCCCACCACACTGATGTT +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALAEGEG*SHHTDV
Trigger: AACATCAGTGTGGTGGGACCAGCCCTCACCTTCCGC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCCCTGTCTGCAAGATTTaGAGCCCTGTCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSPVCKI*SPVCAS
Trigger: GGAAGCACAGACAGGGCTCCAAATCTTGCAGACAGG...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCAGGGCAAATTCAAACTaGTCCTTAGAGCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGRANSN*SLERTR
Trigger: CCTTGTCCGCTCTAAGGACCAGTTTGAATTTGCCCT...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGCAGGCGTGCCCCTTCTaGCTTTCCCTTCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALQACPF*LSLPDS
Trigger: AGAGTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTG...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAAGCAGCCCAGAGTCTTaGAAAAGCTGGGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGSSPES*KSWAGE
Trigger: TTCACCTGCCCAGCTTTTTCAAGACTCTGGGCTGCT...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACAGCAGCCCAGAGTCTTaGAAAAGCTGGGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDSSPES*KSWAGE
Trigger: TTCACCTGCCCAGCTTTTTCAAGACTCTGGGCTGCT...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATCCTGGGCTGCGTCGCTaGACTGGGAGGACACACTGC +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDPGLRR*TGRTHC
Trigger: GCAGTGTGTCCTCCCAGTTCAGCGACGCAGCCCAGG...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALGESRA*GQIDSR
Trigger: ACGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGGCGGGCTGGAAGCTCTaGTGTGTCTCTGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VATLHPILPYWSIGGHTQAGWKL*CVSALH
Trigger: GTGGAGGGCAGAGACACAGCAGAGCTTCCAGCCCGC...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCCAAAGACAGGTTCTaGTCATTGTGCCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALAKDRF*SLCRMR
Trigger: CCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTTGGAGCCCTGTCTGTaGTTCCAGTTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSLEPCL*FQFRLH
Trigger: GTGAAGTCTGAACTGGAAGCACAGACAGGGCTCCAA...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGTGTCCCACTCCTGTCTaGAAGATTTGGAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGCPTPV*KIWSPV
Trigger: GACAGGGCTCCAAATCTTGCAGACAGGAGTGGGACA...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACAGCGCATGGGTGAGGTaGTGTGCGCAGTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHSAWVR*CAQFGE
Trigger: TTCCCCAAACTGCGCACAGCACCTCACCCATGCGCT...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATCAGCCCAGCCACACCTaGCAGGGCCACCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDQPSHT*QGHQSE
Trigger: CTCACTCTGGTGGCCCTGGCAGGTGTGGCTGGGCTG...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGTCTTGCTGCCGCGCATaGTGCCGCACACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: VATLHPILPYWSIGGHTQSCCRA*CRTHRA
Trigger: GGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCAAGA...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATACAGGTGTTTGGCTCTaGTTGGTAGGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDTGVWL*LVGTEG
Trigger: GCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGT...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGACAGGTGTTTGGCTCTaGTTGGTAGGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALTGVWL*LVGTEG
Trigger: GCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGT...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCCCACCTTCAGTTTTATaGGGGCATGGTCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSPPSVL*GHGHRA
Trigger: TGCCCTATGACCATGCCCGCATAAAACTGAAGGTGG...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCGCTCCGAGAAGGGCTaGTCTCCACCTTCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGRSEKG*SPPSVL
Trigger: TAAAACTGAAGGTGGAGAGCAGCCCTTCTCGGAGCG...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGCATCTGCCAGAAGTCTaGGATGGTATGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALHLPEV*DGMGQR
Trigger: CCGCTGTCCCATACCATCGCAGACTTCTGGCAGATG...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACTCTCCCACACCATCTaGCAGAAGTCTGCGATGGTA +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGLSHTI*QKSAMV
Trigger: TACCATCGCAGACTTCTGGCAGATGGTGTGGGAGAG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCCTCCTTCACTCCTTTTaGCATGCGGTTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSLLHSF*HAVQDH
Trigger: ATGGTCCTGAACCGCATGGCAAAAGGAGTGAAGGAG...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCAGGTGAGAGCAGAGCCTGCGGTCAAATAGACAGCCTCCCAGGCGCCTCGGAGGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: PGESRACGQIDSLPGASEGESRA*GQIDSL
Trigger: GAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACC...CTCCGAGGCGCCTGGGAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR CCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGTGCCAGGACAATCCTTaGGACATGAGTTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGCQDNP*DMSCRS
Trigger: GCTCCGACAACTCATGTCCCAAGGATTGTCCTGGCA...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGACCTTTGCCCACTGGTaGTTGTGGAAGCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALTFAHW*LWKPML
Trigger: CAGCATCGGCTTCCACAACCACCAGTGGGCAAAGGT...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGGGAGCCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGTCCACCTTTGCCCACTaGTGGTTGTGGAAGCCGATG +
Preference number: 4 (lower is better)
Translates to: GGAGCGDPPPHSSILEHRSTFAH*WLWKPM
Trigger: CATCGGCTTCCACAACCACCAGTGGGCAAAGGTGGA...CCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGTCCACCTTTGCCCACTaGTGGTTGTGGAAGCCGATG +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALSTFAH*WLWKPM
Trigger: CATCGGCTTCCACAACCACCAGTGGGCAAAGGTGGA...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACCCTGTCTGCAAGATTTaGAGCCCTGTCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDPVCKI*SPVCAS
Trigger: GGAAGCACAGACAGGGCTCCAAATCTTGCAGACAGG...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACTTCGTGGCCATGTGCTaGCGGCACAGGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHFVAMC*RHRSWY
Trigger: GTACCAGGACCTGTGCCGCCAGCACATGGCCACGAA...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACAAGTCTGCGATGGTATaGGACAGCGGGCCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHKSAMV*DSGPCV
Trigger: CACGCAGGGCCCGCTGTCCCATACCATCGCAGACTT...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGGGCAGGAGAAGGCTCTaGGTAGAATTGCTACCCATG +
Preference number: 4 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLGRRRL*VELLPM
Trigger: CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCC...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACGCGGAAGGTGAGGGCTaGTCCCACCACATTCTGATC +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHAEGEG*SHHILI
Trigger: GATCAGAATGTGGTGGGACCAGCCCTCACCTTCCGC...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS-3UTR TCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACATACAGACTTCCAGGTaGGAGCAGAGCCTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHIQTSR*EQSLRS
Trigger: TGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTAT...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACACAATCCTTGGGACATaGGTTGTCGGAGCACACCTT +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDTILGT*VVGAHL
Trigger: AAGGTGTGCTCCGACAACTCATGTCCCAAGGATTGT...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACTGGGTGAGGTCATCGTaGCAGGACAATCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: PGVATLHPILPYWSIGGHWVRSS*QDNPWD
Trigger: GTCCCAAGGATTGTCCTGGCACGATGACCTCACCCA...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACCAGGTCTCTTGGGTaGCAAGCCAGACCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHTRSLG*QARPVP
Trigger: AGGGACAGGTCTGGCTTGGCACCCAAGAGACCTGGT...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTCTGGGGAGTCCTCTaGCCGGCTGCTGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVLWGVL*PAAAPL
Trigger: CAAGGGAGCAGCAGCCGGGCAGAGGACTCCCCAGAG...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCACAGCGGCCAGCCTCTaGAGAGCCGCATCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVTAASL*RAASGC
Trigger: GCAGCCAGATGCGGCTCTGCAGAGGCTGGCCGCTGT...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACTTGGAGCCCTGTCTGTaGTTCCAGTTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDLEPCL*FQFRLH
Trigger: GTGAAGTCTGAACTGGAAGCACAGACAGGGCTCCAA...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGTGTCCCACTCCTGTCTaGAAGATTTGGAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALCPTPV*KIWSPV
Trigger: GACAGGGCTCCAAATCTTGCAGACAGGAGTGGGACA...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACAGCGCATGGGTGAGGTaGTGTGCGCAGTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHSAWVR*CAQFGE
Trigger: TTCCCCAAACTGCGCACAGCACCTCACCCATGCGCT...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCAGGCGCTCCTTGTCTTaGTGCCGCGCATGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVRRSLS*CRACCR
Trigger: GCGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCT...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCCGCACCAGGACGGGGTaGTGCTGTGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSRTRTG*CCGSWG
Trigger: GCCCCAGCTCCCACAGCAGCACCCCGTCCTGGTGCG...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCGGCAGGAAGTCAGGATaGCGGTTCTTTTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSGRKSG*RFFLML
Trigger: CAACATCAAAAAGAACCGGCATCCTGACTTCCTGCC...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACCACCTTCAGTTTTATaGGGGCATGGTCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGPPSVL*GHGHRA
Trigger: TGCCCTATGACCATGCCCGCATAAAACTGAAGGTGG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATCGCTCCGAGAAGGGCTaGTCTCCACCTTCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDRSEKG*SPPSVL
Trigger: TAAAACTGAAGGTGGAGAGCAGCCCTTCTCGGAGCG...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGGCCGGTGTGCCCTCTaGCGGCCAGCTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRGRCAL*RPAEEV
Trigger: CACTTCCTCAGCTGGCCGGCAGAGGGCACACCGGCC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGTCACTCCTTTTGCCATaGGGTTCAGGACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGSLLLP*GSGPCR
Trigger: TCGACATGGTCCTGAACCGCATGGCAAAAGGAGTGA...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATCTGGTCCTTTTGCCATaGGGTTCAGGACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDLVLLP*GSGPCR
Trigger: TCGACATGGTCCTGAACCGCATGGCAAAAGGACCAG...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443981.5
CDS-3UTR CCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACCAGGACCAGGTCTCTTaGGTGCCAAGCCAGACCTGT +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHQDQVS*VPSQTC
Trigger: ACAGGTCTGGCTTGGCACCCAAGAGACCTGGTCCTG...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGCTGCAGAGCCGCATCTaGCTGCACAGCTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMLQSRI*LHSWGS
Trigger: GCTTCCCCAGCTGTGCAGCCAGATGCGGCTCTGCAG...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGGGGGGATGTGCGGGCTaGAAGCTCTGCTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: VATLHPILPYWSIGGHTQGGCAG*KLCCVS
Trigger: AGAGACACAGCAGAGCTTCCAGCCCGCACATCCCCC...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGAAGGTAGTGTCACCATaGGCCCCCTCAGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMKVVSP*APSGPR
Trigger: CCTGGGGCCTGAGGGGGCCCATGGTGACACTACCTT...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGGCCAGCTGAGGAAGTaGAACTGCGTGAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDGQLRK*NCVSVR
Trigger: GCGCACGCTCACGCAGTTCCACTTCCTCAGCTGGCC...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCTCTGGCATGCGAGGCTaGGCAGGCGTGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVSGMRG*AGVPLL
Trigger: CAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGA...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATGGCAGGAGAAGGCTCTaGGTAGAATTGCTACCCATG +
Preference number: 4 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDGRRRL*VELLPM
Trigger: CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCC...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACCCCATTCTTCCATACTaGAGCATAGGGGGACACACA +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDPILPY*SIGGHT
Trigger: TGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGAAGGGGGAGCCGGGTGTaGCGACCCTCCACCCCATTC +
Preference number: 4 (lower is better)
Translates to: LEMFSCARRREVEQRMVGRGSRV*RPSTPF
Trigger: GAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCCT...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCCCCTGGGGAGCCCTCTaGGACCCTGGAGCCATCACG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELPWGAL*DPGAIT
Trigger: CGTGATGGCTCCAGGGTCTCAGAGGGCTCCCCAGGG...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTCACTGCAGTGCACGATaGTGGGGCAGGAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPHCSAR*WGRSGP
Trigger: GGGGCCGCTCCTGCCCCATCATCGTGCACTGCAGTG...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCCCTGGCCCTGCTGGGTaGTGGCAACTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELPGPAG*WQLLGQ
Trigger: CTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGG...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCTTGGCACCCTGGCCCTaGTGGGTGCTGGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVLAPWP*WVLATP
Trigger: AGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAA...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCAGAGCCGCATCTGGCTaGACAGCTGGGGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVRAASG*TAGEAG
Trigger: GCCTGCTTCCCCAGCTGTGCAGCCAGATGCGGCTCT...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGCTCTGCTGTGTCTCTaGCCTCCACCGGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRALLCL*PPPAPP
Trigger: TGGAGGGGCCGGTGGAGGGCAGAGACACAGCAGAGC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGGGGAGCCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGTTGGAGCCCTGTCTGTaGTTCCAGTTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: GGAGCGDPPPHSSILEHRLEPCL*FQFRLH
Trigger: GTGAAGTCTGAACTGGAAGCACAGACAGGGCTCCAA...CCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCGCTCCTTGTCTTGCTaGCGCGCATGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVRSLSC*RACCRT
Trigger: TGTGCGGCAGCATGCGCGGCAGCAAGACAAGGAGCG...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGAGCACCCCCATGGGATaGCCTGGGCTCTGGGATGCC +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRSTPMG*PGLWDA
Trigger: GGCATCCCAGAGCCCAGGGCATCCCATGGGGGTGCT...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCTGGGGTGTCCAGGCATaGGGGATGTGCGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVWGVQA*GMCGLE
Trigger: TTCCAGCCCGCACATCCCCCATGCCTGGACACCCCA...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGTGTCACAGGGGGTCTaGCAGCTTTGGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTVSQGV*QLWEAQ
Trigger: CTGAGCCTCCCAAAGCTGCCAGACCCCCTGTGACAC...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATACCGTGGGCTGGCTCTaGCCCAGTGGGCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDTVGWL*PSGLFF
Trigger: GAAGAAAAGCCCACTGGGCCAGAGCCAGCCCACGGT...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACTGGGGCAGTGAGGAGTaGGTACACAGAGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHWGSEE*VHRDAH
Trigger: GTGAGCATCTCTGTGTACCCACTCCTCACTGCCCCA...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCGGATGCCCCAGGCTCTaGCATGCGAGGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSGCPRL*HARLGR
Trigger: CCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCC...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCAGGGGGAGCCGGGTGTaGCGACCCTCCACCCCATTC +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELRGSRV*RPSTPF
Trigger: GAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCCT...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCAGGGCAAATTCAAACTaGTCCTTTTGCCATGCGGTT +
Preference number: 4 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSRANSN*SFCHAV
Trigger: AACCGCATGGCAAAAGGACCAGTTTGAATTTGCCCT...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443981.5
CDS-3UTR TCA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCCCTCCATTGTTTTCTTaGTATCAGCTCCAACATTTA +
Preference number: 4 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGPPLFS*YQLQHL
Trigger: TAAATGTTGGAGCTGATATCAAGAAAACAATGGAGG...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCAGCGGTCACACTGCTTaGCACCATCCTCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVSGHTA*HHPPPA
Trigger: CGCTGGTGGAGGATGGTGTCAAGCAGTGTGACCGCT...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACACCCCAGCTCCACCTTTaGCCACTGGTGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTPQLHL*PLVVVE
Trigger: TTCCACAACCACCAGTGGGCAAAGGTGGAGCTGGGG...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGGGTGGTCCCCAAATATaGCCTTGGAGGCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VATLHPILPYWSIGGHTQGGPQI*PWRQFC
Trigger: GCAGAACTGCCTCCAAGGGCATATTTGGGGACCACC...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGAGTCCTCTGCCCGGCTaGTGCTCCCTTGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRSPLPG*CSLALA
Trigger: TGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGGACT...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCACAGCGGCCAGCCTCTaGAGAGCCGCATCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSTAASL*RAASGC
Trigger: GCAGCCAGATGCGGCTCTGCAGAGGCTGGCCGCTGT...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGCGGGCTGGAAGCTCTaGTGTGTCTCTGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRAGWKL*CVSALH
Trigger: GTGGAGGGCAGAGACACAGCAGAGCTTCCAGCCCGC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGAGGGAAGGACTGCAGCTaGCTCCTCCCTCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LEMFSCARRREVEQRMVGGKDCS*LLPLSH
Trigger: GTGGGACAGAGGGAGGAGGCAGCTGCAGTCCTTCCC...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGAGCGCATGGGTGAGGTaGTGTGCGCAGTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMSAWVR*CAQFGE
Trigger: TTCCCCAAACTGCGCACAGCACCTCACCCATGCGCT...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCCAGCCCAGCCACACCTaGCAGGGCCACCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSQPSHT*QGHQSE
Trigger: CTCACTCTGGTGGCCCTGGCAGGTGTGGCTGGGCTG...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGATCTTGCTGCCGCGCATaGTGCCGCACACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGSCCRA*CRTHRA
Trigger: GGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCAAGA...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGCGCTCCTTGTCTTGCTaGCGCGCATGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRRSLSC*RACCRT
Trigger: TGTGCGGCAGCATGCGCGGCAGCAAGACAAGGAGCG...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGACTTCGTGGCCATGTaGTGGCGGCACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRDFVAM*WRHRSW
Trigger: CCAGGACCTGTGCCGCCAGCACATGGCCACGAAGTC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGGCATCCGAGGGTCATaGTCAATAATGGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDGIRGS*SIMGLA
Trigger: CGCCAGCCCCATTATTGAGCATGACCCTCGGATGCC...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGCACCATCACTGCAGTaGACGATGATGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTAPSLQ*TMMGQE
Trigger: CTCCTGCCCCATCATCGTGCACTGCAGTGATGGTGC...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR GCA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACCTAGAAATGTTCTCTTaGGCCAGAAGGAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ALACEAGQACPFWLSLPDLEMFS*ARRREV
Trigger: AACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR GCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCACATGCCCCTCTCGCTaGAACGCGGCCAACCGCAGG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELTCPSR*NAANRR
Trigger: CCTGCGGTTGGCCGCGTTGCAGCGAGAGGGGCATGT...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS-3UTR GCA 90 bp CCTGCCCCACTCCCACCTGGCACTGCCCAAACAAGCCATCCTGAATACAGACTTGTCTCTAAGTCCCTCTaGCCACATGCACCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: PAPLPPGTAQTSHPEYRLVSKSL*PHAPRV
Trigger: GACACGGGGTGCATGTGGGCAGAGGGACTTAGAGAC...AAGTCTGTATTCAGGATGGCTTGTTTGGGCAGTGCCAGGTGGGAGTGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR CCA 90 bp CGGTCAAATAGACAGCCTCCCAGGCGCCTCGGAGCAAGTGGCTTCTCCTGTGGTTGCCAGGACAATCCTTaGGACATGAGTTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RSNRQPPRRLGASGFSCGCQDNP*DMSCRS
Trigger: GCTCCGACAACTCATGTCCCAAGGATTGTCCTGGCA...ACCACAGGAGAAGCCACTTGCTCCGAGGCGCCTGGGAGGCTGTCTATTTGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR CCA 90 bp CTGCCCCACTCCCACCTGGCACTGCCCAAACAAGCCATCCTGAATACAGACTTCCAGGACCAGGTCTCTTaGGTGCCAAGCCAGACCTGT +
Preference number: 4 (lower is better)
Translates to: LPHSHLALPKQAILNTDFQDQVS*VPSQTC
Trigger: ACAGGTCTGGCTTGGCACCCAAGAGACCTGGTCCTG...GAAGTCTGTATTCAGGATGGCTTGTTTGGGCAGTGCCAGGTGGGAGTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGGCCCTGCTGGGTGCTaGCAACTCCTGGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRGPAGC*QLLGQI
Trigger: TATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGGCGGAAGGTGAGGGCTaGTCCCACCACACTGATGTT +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMAEGEG*SHHTDV
Trigger: AACATCAGTGTGGTGGGACCAGCCCTCACCTTCCGC...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACCCTGTCTGCAAGATTTaGAGCCCTGTCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHPVCKI*SPVCAS
Trigger: GGAAGCACAGACAGGGCTCCAAATCTTGCAGACAGG...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGCAGCACTGAGCGCATaGGTGAGGTGCTGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRAALSA*VRCCAQ
Trigger: CTGCGCACAGCACCTCACCCATGCGCTCAGTGCTGC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAAAGGTAGTGTCACCATaGGCCCCCTCAGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGKVVSP*APSGPR
Trigger: CCTGGGGCCTGAGGGGGCCCATGGTGACACTACCTT...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCCCTCCCCCTGCGCGGTaGCACAGGTGTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELPPPAR*HRCLAL
Trigger: CAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGG...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATCGTGGCTATGTAGGCTaGCATCCGAGGGTCATGCTC +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDRGYVG*HPRVML
Trigger: GAGCATGACCCTCGGATGCCAGCCTACATAGCCACG...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCGCCAGAAGTCTGCGATaGTATGGGACAGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVARSLR*YGTAGP
Trigger: AGGGCCCGCTGTCCCATACCATCGCAGACTTCTGGC...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGGGAGCCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGAGGGCAAATTCAAACTaGTCCTTAGAGCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: GGAGCGDPPPHSSILEHRRANSN*SLERTR
Trigger: CCTTGTCCGCTCTAAGGACCAGTTTGAATTTGCCCT...CCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATCAGGCGTGCCCCTTCTaGCTTTCCCTTCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDQACPF*LSLPDS
Trigger: AGAGTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTG...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp TGTCGGAGCACACCTTGTAAGCGTTGGAGAACTGGGGAGGTGACTTGCAAAAGGCCTTCTCCCGAACCGTaGGCACTAACGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CRSTPCKRWRTGEVTCKRPSPEP*ALTALQ
Trigger: CTGCAGCGCCGTTAGTGCCCACGGTTCGGGAGAAGG...CCTTTTGCAAGTCACCTCCCCAGTTCTCCAACGCTTACAAGGTGTGCTCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR TCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGATACAGACTTCCAGGTaGGAGCAGAGCCTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMIQTSR*EQSLRS
Trigger: TGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTAT...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGACCCTCTGCCCGGTTaGACAAGGACTTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRDPLPG*TRTSWP
Trigger: TGGCCACGAAGTCCTTGTTCAACCGGGCAGAGGGTC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGCACACTGCTCACCCGTaGAGGCTCCGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVHTAHP*RLRWTL
Trigger: GAGGGTCCACCGGAGCCTTCACGGGTGAGCAGTGTG...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGCCTGGGCTGCGTCGCTaGACTGGGAGGACACACTGC +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVPGLRR*TGRTHC
Trigger: GCAGTGTGTCCTCCCAGTTCAGCGACGCAGCCCAGG...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGAGCGGTCACACTGCTTaGCACCATCCTCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRSGHTA*HHPPPA
Trigger: CGCTGGTGGAGGATGGTGTCAAGCAGTGTGACCGCT...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTGESRA*GQIDSR
Trigger: ACGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACC...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTGGGTGAGGTCATCGTaGCAGGACAATCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMWVRSS*QDNPWD
Trigger: GTCCCAAGGATTGTCCTGGCACGATGACCTCACCCA...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCCCCAGCTCCACCTTTaGCCACTGGTGGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVPQLHL*PLVVVE
Trigger: TTCCACAACCACCAGTGGGCAAAGGTGGAGCTGGGG...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATACAGGGCTTGGCACCTaGTGGACTTCACTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDTGLGT*WTSLEV
Trigger: TACCTCCAGTGAAGTCCAGCAGGTGCCAAGCCCTGT...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCGACTTCGTGGCCATGTaGTGGCGGCACAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELDFVAM*WRHRSW
Trigger: CCAGGACCTGTGCCGCCAGCACATGGCCACGAAGTC...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACACATCTGCCAGAAGTCTaGGATGGTATGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTHLPEV*DGMGQR
Trigger: CCGCTGTCCCATACCATCGCAGACTTCTGGCAGATG...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCCGCTGGTCACGGACATaGTCCAGGGTGGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELRWSRT*SRVAAM
Trigger: CATCGCTGCCACCCTGGAGCATGTCCGTGACCAGCG...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCTCCTCTCCTCCTGGCTaGAGCACCCCCATGGGATGC +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELSSPPG*STPMGC
Trigger: GCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGA...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTGTCCCTCTGCCCACATaGACCCCGTGTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPVPLPT*TPCPSP
Trigger: GGGAGAAGGACACGGGGTGCATGTGGGCAGAGGGAC...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423636.6
CDS-3UTR CCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGTGCCAGGACAATCCTTaGGACATGAGTTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: VATLHPILPYWSIGGHTQCQDNP*DMSCRS
Trigger: GCTCCGACAACTCATGTCCCAAGGATTGTCCTGGCA...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCAGGGGCGGAGCCAGTaGGGATGTCCTGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVQGRSQ*GCPVKA
Trigger: TGCTTTTACAGGACATCCCCACTGGCTCCGCCCCTG...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCGGCCCTGCTGGGTGCTaGCAACTCCTGGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSGPAGC*QLLGQI
Trigger: TATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCC...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGCTTCTCATAGCCCTCTaGGGAGTCCTCTGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRLLIAL*GVLCPA
Trigger: AGCCGGGCAGAGGACTCCCCAGAGGGCTATGAGAAG...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTCTGCAGAGCCGCATCTaGCTGCACAGCTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPLQSRI*LHSWGS
Trigger: GCTTCCCCAGCTGTGCAGCCAGATGCGGCTCTGCAG...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAGGGGGATGTGCGGGCTaGAAGCTCTGCTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGGGCAG*KLCCVS
Trigger: AGAGACACAGCAGAGCTTCCAGCCCGCACATCCCCC...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAAGAGGAGACAGGGCTTaGCACCTGCTGGACTTCACT +
Preference number: 4 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTRGDRA*HLLDFT
Trigger: AGTGAAGTCCAGCAGGTGCCAAGCCCTGTCTCCTCT...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGTGGCGGCACAGGTCCTaGTACTCAAAGGTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: VATLHPILPYWSIGGHTQWRHRS*YSKVVS
Trigger: TGACACTACCTTTGAGTACCAGGACCTGTGCCGCCA...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGATGTCCATGTTGGCTTaGGCCGGCTCCTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRMSMLA*AGSSHQ
Trigger: CTGGTGCGAGGAGCCGGCCCAAGCCAACATGGACAT...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGAGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: LEMFSCARRREVEQRMVGGGTLI*PVAVTL
Trigger: CAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCC...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTGGGGCAGTGAGGAGTaGGTACACAGAGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMWGSEE*VHRDAH
Trigger: GTGAGCATCTCTGTGTACCCACTCCTCACTGCCCCA...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTTGCCCAAGAGGTGGCTaGTGGGGCAGTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPCPRGG*WGSEEW
Trigger: CCACTCCTCACTGCCCCACCAGCCACCTCTTGGGCA...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACCCCATTCTTCCATACTaGAGCATAGGGGGACACACA +
Preference number: 4 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHPILPY*SIGGHT
Trigger: TGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp TGGGACATGAGTTGTCGGAGCACACCTTGTAAGCGTTGGAGAACTGGGGAGGTGATACAGACTTCCAGGTaGGAGCAGAGCCTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: WDMSCRSTPCKRWRTGEVIQTSR*EQSLRS
Trigger: TGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTAT...CACCTCCCCAGTTCTCCAACGCTTACAAGGTGTGCTCCGACAACTCATGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR TCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGATGCGCTCCATCTCCTaGGAGATCACATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMMRSIS*EITYWV
Trigger: CACCCAGTATGTGATCTCTCAGGAGATGGAGCGCAT...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCGACCCTCTGCCCGGTTaGACAAGGACTTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSDPLPG*TRTSWP
Trigger: TGGCCACGAAGTCCTTGTTCAACCGGGCAGAGGGTC...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGAGATGCCGGTTCTTTTTaGTGTTGCCCTCCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LEMFSCARRREVEQRMVGDAGSF*CCPPPA
Trigger: CGCAGGGGGAGGGCAACATCAAAAAGAACCGGCATC...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAGATGCCGGTTCTTTTTaGTGTTGCCCTCCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGDAGSF*CCPPPA
Trigger: CGCAGGGGGAGGGCAACATCAAAAAGAACCGGCATC...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCAGCGGTCACACTGCTTaGCACCATCCTCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELSGHTA*HHPPPA
Trigger: CGCTGGTGGAGGATGGTGTCAAGCAGTGTGACCGCT...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCTGGCTGGTGGGGCAGTaGGGAGTGGGTACACAGAGA +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELWLVGQ*GVGTQR
Trigger: TCTCTGTGTACCCACTCCTCACTGCCCCACCAGCCA...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR GCA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGAACCAGGTCTCTTGGGTaGCAAGCCAGACCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LEMFSCARRREVEQRMVGTRSLG*QARPVP
Trigger: AGGGACAGGTCTGGCTTGGCACCCAAGAGACCTGGT...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGAGAGCCGCATCTGGCTaGACAGCTGGGGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVRAASG*TAGEAG
Trigger: GCCTGCTTCCCCAGCTGTGCAGCCAGATGCGGCTCT...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGACTCCGGTGGACCCTCTaGCCGGTTGAACAAGGACTT +
Preference number: 4 (lower is better)
Translates to: LEMFSCARRREVEQRMVGLRWTL*PVEQGL
Trigger: AAGTCCTTGTTCAACCGGGCAGAGGGTCCACCGGAG...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGAACTTGTTCACCTTCCTaGGGAAGTCCAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LEMFSCARRREVEQRMVGTCSPS*GSPAGA
Trigger: GGCCCCTGCTGGACTTCCGCAGGAAGGTGAACAAGT...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGCAGGGGCGGAGCCAGTaGGGATGTCCTGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRQGRSQ*GCPVKA
Trigger: TGCTTTTACAGGACATCCCCACTGGCTCCGCCCCTG...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCAGCCCTCTGAGACCCTaGAGCCATCACGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELSPLRP*SHHGSQ
Trigger: TTGGCTCCCGTGATGGCTCCAGGGTCTCAGAGGGCT...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCCTTCTCATAGCCCTCTaGGGAGTCCTCTGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELLLIAL*GVLCPA
Trigger: AGCCGGGCAGAGGACTCCCCAGAGGGCTATGAGAAG...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCGGGGGATGTGCGGGCTaGAAGCTCTGCTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELGGCAG*KLCCVS
Trigger: AGAGACACAGCAGAGCTTCCAGCCCGCACATCCCCC...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTGTGTCACAGGGGGTCTaGCAGCTTTGGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPVSQGV*QLWEAQ
Trigger: CTGAGCCTCCCAAAGCTGCCAGACCCCCTGTGACAC...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGACCAGCCCTGCTTGTTaGGTCACATCAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMTSPAC*VTSAKD
Trigger: GTCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGT...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTGGCGGCACAGGTCCTaGTACTCAAAGGTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMWRHRS*YSKVVS
Trigger: TGACACTACCTTTGAGTACCAGGACCTGTGCCGCCA...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCATGTCCATGTTGGCTTaGGCCGGCTCCTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSMSMLA*AGSSHQ
Trigger: CTGGTGCGAGGAGCCGGCCCAAGCCAACATGGACAT...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGACGTGGCTATGTAGGCTaGCATCCGAGGGTCATGCTC +
Preference number: 4 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGRGYVG*HPRVML
Trigger: GAGCATGACCCTCGGATGCCAGCCTACATAGCCACG...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGACAGGCGTGCCCCTTCTaGCTTTCCCTTCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGQACPF*LSLPDS
Trigger: AGAGTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTG...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGGGCAGGAGAAGGCTCTaGGTAGAATTGCTACCCATG +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMGRRRL*VELLPM
Trigger: CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCC...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGAGGTTGAGCAGCGCATaGTGGGAGGGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVRLSSA*WEGGGR
Trigger: CCTCCCACCACCCTCCCACCATGCGCTGCTCAACCT...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTAGGTTCGTAACTCAGTaGAGGGTGGGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPRFVTQ*RVGRLW
Trigger: CCACAGCCTCCCCACCCTTCACTGAGTTACGAACCT...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGACCCTCTGCCCGGTTaGACAAGGACTTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVDPLPG*TRTSWP
Trigger: TGGCCACGAAGTCCTTGTTCAACCGGGCAGAGGGTC...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCGATGCCGGTTCTTTTTaGTGTTGCCCTCCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELDAGSF*CCPPPA
Trigger: CGCAGGGGGAGGGCAACATCAAAAAGAACCGGCATC...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTGAGAGATCACATACTGGGTGAGGTCATCGTGCCAGGACAATCCTTGGGACATACCAGGTCTCTTGGGTaGCAAGCCAGACCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LRDHILGEVIVPGQSLGHTRSLG*QARPVP
Trigger: AGGGACAGGTCTGGCTTGGCACCCAAGAGACCTGGT...ATGTCCCAAGGATTGTCCTGGCACGATGACCTCACCCAGTATGTGATCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR GCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAGGTGGTCCCCAAATATaGCCTTGGAGGCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGGGPQI*PWRQFC
Trigger: GCAGAACTGCCTCCAAGGGCATATTTGGGGACCACC...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTCTCCGGTGGACCCTCTaGCCGGTTGAACAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPLRWTL*PVEQGL
Trigger: AAGTCCTTGTTCAACCGGGCAGAGGGTCCACCGGAG...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGCCACCTTCAGTTTTATaGGGGCATGGTCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMPPSVL*GHGHRA
Trigger: TGCCCTATGACCATGCCCGCATAAAACTGAAGGTGG...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTACTTGTTCACCTTCCTaGGGAAGTCCAGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPTCSPS*GSPAGA
Trigger: GGCCCCTGCTGGACTTCCGCAGGAAGGTGAACAAGT...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATACACCTTGTAAGCGTTaGAGAACTGGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDTPCKR*RTGEVT
Trigger: AGTCACCTCCCCAGTTCTCCAACGCTTACAAGGTGT...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp AGCCAGTGGGGATGTCCTGTAAAAGCAGCTCTCCAGCAGGACCAGGTCTCTTGGACACCTTGTAAGCGTTaGAGAACTGGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: SQWGCPVKAALQQDQVSWTPCKR*RTGEVT
Trigger: AGTCACCTCCCCAGTTCTCCAACGCTTACAAGGTGT...CCAAGAGACCTGGTCCTGCTGGAGAGCTGCTTTTACAGGACATCCCCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGACCTTTGCCCACTGGTaGTTGTGGAAGCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRTFAHW*LWKPML
Trigger: CAGCATCGGCTTCCACAACCACCAGTGGGCAAAGGT...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTTCTTCCTGCACCCTTaGGCAGTAGCTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSFFLHP*AVAAAG
Trigger: CCCTGCTGCAGCTACTGCCCAAGGGTGCAGGAAGAA...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGAAGTCTGCGATGGTATaGGACAGCGGGCCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVKSAMV*DSGPCV
Trigger: CACGCAGGGCCCGCTGTCCCATACCATCGCAGACTT...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGTGGGGCAGTGAGGAGTaGGTACACAGAGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRWGSEE*VHRDAH
Trigger: GTGAGCATCTCTGTGTACCCACTCCTCACTGCCCCA...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CCA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATCCCATTCTTCCATACTaGAGCATAGGGGGACACACA +
Preference number: 4 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDPILPY*SIGGHT
Trigger: TGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp GGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTATACAGACTTCCAGGTaGGAGCAGAGCCTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: GNVGRRRLWVELLPMSFPIQTSR*EQSLRS
Trigger: TGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTAT...AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp TGTCGGAGCACACCTTGTAAGCGTTGGAGAACTGGGGAGGTGACTTGCAAAAGGATGCGCTCCATCTCCTaGGAGATCACATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: CRSTPCKRWRTGEVTCKRMRSIS*EITYWV
Trigger: CACCCAGTATGTGATCTCTCAGGAGATGGAGCGCAT...CCTTTTGCAAGTCACCTCCCCAGTTCTCCAACGCTTACAAGGTGTGCTCCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR TCA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCGGGGCTTCTGATCAGTaGCGATGTAGCCATATTCCT +
Preference number: 4 (lower is better)
Translates to: QARECRQEKALGRIATHVGASDQ*RCSHIP
Trigger: AGGAATATGGCTACATCGTCACTGATCAGAAGCCCC...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTGAGAGATCACATACTGGGTGAGGTCATCGTGCCAGGACAATCCTTGGGACATTGGGTGAGGTCATCGTaGCAGGACAATCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LRDHILGEVIVPGQSLGHWVRSS*QDNPWD
Trigger: GTCCCAAGGATTGTCCTGGCACGATGACCTCACCCA...ATGTCCCAAGGATTGTCCTGGCACGATGACCTCACCCAGTATGTGATCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGTGTCCCACTCCTGTCTaGAAGATTTGGAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRCPTPV*KIWSPV
Trigger: GACAGGGCTCCAAATCTTGCAGACAGGAGTGGGACA...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGGCAGGAAGTCAGGATaGCGGTTCTTTTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTGRKSG*RFFLML
Trigger: CAACATCAAAAAGAACCGGCATCCTGACTTCCTGCC...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGGGCAGGAAGTCAGGATaGCGGTTCTTTTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMGRKSG*RFFLML
Trigger: CAACATCAAAAAGAACCGGCATCCTGACTTCCTGCC...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCCATCTGCCAGAAGTCTaGGATGGTATGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELHLPEV*DGMGQR
Trigger: CCGCTGTCCCATACCATCGCAGACTTCTGGCAGATG...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGACTCTCCCACACCATCTaGCAGAAGTCTGCGATGGTA +
Preference number: 4 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGLSHTI*QKSAMV
Trigger: TACCATCGCAGACTTCTGGCAGATGGTGTGGGAGAG...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSGESRA*GQIDSL
Trigger: GAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACC...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTCAAATAGACAGCCGTaGGCACTAACGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSSNRQP*ALTALQ
Trigger: CTGCAGCGCCGTTAGTGCCCACGGCTGTCTATTTGA...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGACCAGCCCTGCTTGTTaGGTCACATCAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRTSPAC*VTSAKD
Trigger: GTCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGT...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCGGTGGCACAGGTGTTTaGCTCTGCTTGGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSGGTGV*LCLVGT
Trigger: TGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACC...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGAGGGCAAATTCAAACTaGTCCTTAGAGCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMRANSN*SLERTR
Trigger: CCTTGTCCGCTCTAAGGACCAGTTTGAATTTGCCCT...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCAAGTGGCTTCTCCTGTaGTCTCGCAGCCGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELKWLLL*SRSRSL
Trigger: TAGAGACCGGCTGCGAGACCACAGGAGAAGCCACTT...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423636.6
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGTCACTCCTTTTGCCATaGGGTTCAGGACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRSLLLP*GSGPCR
Trigger: TCGACATGGTCCTGAACCGCATGGCAAAAGGAGTGA...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGCTCCTTCACTCCTTTTaGCATGCGGTTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRLLHSF*HAVQDH
Trigger: ATGGTCCTGAACCGCATGGCAAAAGGAGTGAAGGAG...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR GCA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACACTAGAAATGTTCTCTTaGGCCAGAAGGAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTLEMFS*ARRREV
Trigger: AACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCACCAGCCCTGCTTGTTaGGTCACATCAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELTSPAC*VTSAKD
Trigger: GTCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGT...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGTGGCACAGGTGTTTaGCTCTGCTTGGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVGGTGV*LCLVGT
Trigger: TGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACC...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR TCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGATGCGCTCCATCTCCTaGGAGATCACATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVMRSIS*EITYWV
Trigger: CACCCAGTATGTGATCTCTCAGGAGATGGAGCGCAT...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGCAGGAGAAGGCTCTaGGTAGAATTGCTACCCATG +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVGRRRL*VELLPM
Trigger: CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCC...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CCA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCCCCATTCTTCCATACTaGAGCATAGGGGGACACACA +
Preference number: 4 (lower is better)
Translates to: RECRQEKALGRIATHVLSPILPY*SIGGHT
Trigger: TGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR TCA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGCCACATTCTGATCAGTaGCGATGTAGCCATATTCCT +
Preference number: 4 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRPHSDQ*RCSHIP
Trigger: AGGAATATGGCTACATCGTCACTGATCAGAATGTGG...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS-3UTR GCA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGTCACTCCTTTTGCCATaGGGTTCAGGACCATGTCGA +
Preference number: 4 (lower is better)
Translates to: FLEMFSCARRREVEQRMVSLLLP*GSGPCR
Trigger: TCGACATGGTCCTGAACCGCATGGCAAAAGGAGTGA...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR GCA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGACTAGAAATGTTCTCTTaGGCCAGAAGGAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LEMFSCARRREVEQRMVGLEMFS*ARRREV
Trigger: AACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR TCA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGCCTCCATTGTTTTCTTaGTATCAGCTCCAACATTTA +
Preference number: 4 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMPPLFS*YQLQHL
Trigger: TAAATGTTGGAGCTGATATCAAGAAAACAATGGAGG...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR TCA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCCCTCCATTGTTTTCTTaGTATCAGCTCCAACATTTA +
Preference number: 4 (lower is better)
Translates to: PILPYWSIGGHTQMFRELPPLFS*YQLQHL
Trigger: TAAATGTTGGAGCTGATATCAAGAAAACAATGGAGG...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCGCTGCCAGGCGCTCCTaGTCTTGCTGCCGCGCATGC +
Preference number: 5 (lower is better)
Translates to: GSGMPQALACEAGQACPFAARRS*SCCRAC
Trigger: GCATGCGCGGCAGCAAGACAAGGAGCGCCTGGCAGC...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp AGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGAGCAGGGCCTGCCACTCCTaGGCAAGGCGGTCCCGGTTC +
Preference number: 5 (lower is better)
Translates to: RAPKCESEAGPGLRSRGSRACHS*ARRSRF
Trigger: GAACCGGGACCGCCTTGCCAAGGAGTGGCAGGCCCT...GCTCCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS GCA 90 bp CCCGGCTGCTGCTCCCTTGCTCTGGCAGCCTTGGCACCCTGGCCCTaGTGGGTGCTGGCAACTCCTGGGCCAGATAGAGCAGCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PGCCSLALAALAPWP*WVLATPGPDRAAQS
Trigger: ACTCTGGGCTGCTCTATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGCAGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 90 bp TGGGGAGTCCTCTGCCCGGCTGCTGCTCCCTTGCTCTGGCAGCCTTaGCACCCTGGCCCTGCTGGGTGCTGGCAACTCCTGGGCCAGATA +
Preference number: 5 (lower is better)
Translates to: WGVLCPAAAPLLWQP*HPGPAGCWQLLGQI
Trigger: TATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGGACTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS-3UTR CAA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTTTGCCCACTGGTGGTaGTGGAAGCCGATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GSGMPQALACEAGQACPFFAHWW*WKPMLG
Trigger: GCCCAGCATCGGCTTCCACAACCACCAGTGGGCAAA...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTGGTGCTGTGCGCAGTTaGGGGAAGGACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GMPQALACEAGQACPFWLGAVRS*GKDCSC
Trigger: GCAGCTGCAGTCCTTCCCCAAACTGCGCACAGCACC...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCAGGCGCTCCTTGTCTaGCTGCCGCGCATGCTGCCG +
Preference number: 5 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGQALLV*LPRMLP
Trigger: CGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCTG...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCAGGCGCTCCTTGTCTaGCTGCCGCGCATGCTGCCG +
Preference number: 5 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWQALLV*LPRMLP
Trigger: CGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCTG...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGGCTGCCAGGCGCTCCTaGTCTTGCTGCCGCGCATGC +
Preference number: 5 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGAARRS*SCCRAC
Trigger: GCATGCGCGGCAGCAAGACAAGGAGCGCCTGGCAGC...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACGCTGCCAGGCGCTCCTaGTCTTGCTGCCGCGCATGC +
Preference number: 5 (lower is better)
Translates to: ALACEAGQACPFWLSLPDAARRS*SCCRAC
Trigger: GCATGCGCGGCAGCAAGACAAGGAGCGCCTGGCAGC...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTGGACCCTCTGCCCGGTaGAACAAGGACTTCGTGGCC +
Preference number: 5 (lower is better)
Translates to: GMPQALACEAGQACPFWLGPSAR*NKDFVA
Trigger: GGCCACGAAGTCCTTGTTCAACCGGGCAGAGGGTCC...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGGATGTCCATGTTGGCTaGGGCCGGCTCCTCGCACCA +
Preference number: 5 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGDVHVG*GRLLAP
Trigger: TGGTGCGAGGAGCCGGCCCAAGCCAACATGGACATC...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCCGGTGGCACAGGTGTTaGGCTCTGCTTGGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: GSGMPQALACEAGQACPFRWHRC*ALLGRH
Trigger: GTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCG...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCCCAGAAGGAGAGAGGTaGAGCAGCGCATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGPEGER*SSAWWE
Trigger: CTCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGG...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS GCA 90 bp AATAGACAGCCTCCCTACGAGGCGGGGTCTACATGCCCCTCTCGCTaGAACGCGGCCAACCGCAGGCGGGTGCTGACGACACCTCCACCC +
Preference number: 5 (lower is better)
Translates to: NRQPPYEAGSTCPSR*NAANRRRVLTTPPP
Trigger: GGGTGGAGGTGTCGTCAGCACCCGCCTGCGGTTGGCCGCGTTGCAGCGAGAGGGGCATGTAGACCCCGCCTCGTAGGGAGGCTGTCTATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451506.5
CDS GCA 90 bp AGCCTGCGGTCAAATAGACAGCCTCCCTACGAGGCGGGGTCTACATaGCCCTCTCGCTGCAACGCGGCCAACCGCAGGCGGGTGCTGACG +
Preference number: 5 (lower is better)
Translates to: SLRSNRQPPYEAGST*PSRCNAANRRRVLT
Trigger: CGTCAGCACCCGCCTGCGGTTGGCCGCGTTGCAGCGAGAGGGGCATGTAGACCCCGCCTCGTAGGGAGGCTGTCTATTTGACCGCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451506.5
CDS-3UTR CAA 90 bp GGCTCTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCGACAGGTTCTGCTCATaGTGCCGGATGCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GSGMPQALACEAGQACPFDRFCS*CRMRKV
Trigger: CACCTTCCGCATCCGGCACAATGAGCAGAACCTGTC...GAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGAGGGCCTGCCACTCCTaGGCAAGGCGGTCCCGGTTC +
Preference number: 5 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALRACHS*ARRSRF
Trigger: GAACCGGGACCGCCTTGCCAAGGAGTGGCAGGCCCT...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGGGTGTTTGGCTCTGCTaGGTAGGCACAGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGGVWLC*VGTEGL
Trigger: CAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACC...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS GCA 90 bp CTAGTCCTTCCTTCTCATAGCCCTCTGGGGAGTCCTCTGCCCGGCTaGTGCTCCCTTGCTCTGGCAGCCTTGGCACCCTGGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LVLPSHSPLGSPLPG*CSLALAALAPWPCW
Trigger: CCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGGACTCCCCAGAGGGCTATGAGAAGGAAGGACTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS-3UTR CAA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGGCAGGACCAGGTCTCTaGGGTGCCAAGCCAGACCTG +
Preference number: 5 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLAGPGL*GAKPDL
Trigger: CAGGTCTGGCTTGGCACCCAAGAGACCTGGTCCTGC...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCGGTGTTTGGCTCTGCTaGGTAGGCACAGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSGVWLC*VGTEGL
Trigger: CAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACC...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS TCA 90 bp GGCCTGGGCTGCGTCGCTGAACTGGGAGGACACACTGCTCACCCGTaGAGGCTCCGGTGGACCCTCTGCCCGGTTGAACAAGGACTTCGT +
Preference number: 5 (lower is better)
Translates to: GLGCVAELGGHTAHP*RLRWTLCPVEQGLR
Trigger: ACGAAGTCCTTGTTCAACCGGGCAGAGGGTCCACCGGAGCCTTCACGGGTGAGCAGTGTGTCCTCCCAGTTCAGCGACGCAGCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS-3UTR CAA 90 bp GGCAGAGCGCCCAAGTGTGAGTCAGAGGCAGGCCCGGGGCTGAGAAGCAGGGGGGTGCCAGGACAATCCTaGGGACATGAGTTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: GRAPKCESEAGPGLRSRGVPGQS*GHELSE
Trigger: CTCCGACAACTCATGTCCCAAGGATTGTCCTGGCAC...CCCCCTGCTTCTCAGCCCCGGGCCTGCCTCTGACTCACACTTGGGCGCTCTGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATGCAGGACCAGGTCTCTaGGGTGCCAAGCCAGACCTG +
Preference number: 5 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDAGPGL*GAKPDL
Trigger: CAGGTCTGGCTTGGCACCCAAGAGACCTGGTCCTGC...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGTTTGCCCACTGGTGGTaGTGGAAGCCGATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGFAHWW*WKPMLG
Trigger: GCCCAGCATCGGCTTCCACAACCACCAGTGGGCAAA...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGGGTGTTTGGCTCTGCTaGGTAGGCACAGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLGVWLC*VGTEGL
Trigger: CAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACC...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCGGTTCTTTTTGATGTaGCCCTCCCCCTGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWRFFLM*PSPCAV
Trigger: CACCGCGCAGGGGGAGGGCAACATCAAAAAGAACCG...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCCAGAAGGAGAGAGGTaGAGCAGCGCATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWPEGER*SSAWWE
Trigger: CTCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGG...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CAA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGGGGCTGAGGCGGGGCTaGCCGCTCCCCACCTCCCTA +
Preference number: 5 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMGLRRG*PLPTSL
Trigger: TAGGGAGGTGGGGAGCGGCAAGCCCCGCCTCAGCCC...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS GCA 90 bp GCTGCTCCCTTGCTCTGGCAGCCTTGGCACCCTGGCCCTGCTGGGTaGTGGCAACTCCTGGGCCAGATAGAGCAGCCCAGAGTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: AAPLLWQPWHPGPAG*WQLLGQIEQPRVLK
Trigger: TTTCAAGACTCTGGGCTGCTCTATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS GCA 90 bp TTTGATGTTGCCCTCCCCCTGCGCGGTGGCACAGGTGTTTGGCTCTaGTTGGTAGGCACAGAGGGCCTGCCACTCCTTGGCAAGGCGGTC +
Preference number: 5 (lower is better)
Translates to: FDVALPLRGGTGVWL*LVGTEGLPLLGKAV
Trigger: GACCGCCTTGCCAAGGAGTGGCAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGGGCAACATCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS-3UTR CAA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGTTTCTTCCTGCACCCTaGGGCAGTAGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLFLPAP*GSSCSR
Trigger: CCTGCTGCAGCTACTGCCCAAGGGTGCAGGAAGAAA...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCCTTCACCAGCCCTGCTaGTTGGGTCACATCAGCCAA +
Preference number: 5 (lower is better)
Translates to: PGSGMRGWAGVPLLAFPSLHQPC*LGHISQ
Trigger: TTGGCTGATGTGACCCAACAAGCAGGGCTGGTGAAG...GGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATCGGTTCTTTTTGATGTaGCCCTCCCCCTGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDRFFLM*PSPCAV
Trigger: CACCGCGCAGGGGGAGGGCAACATCAAAAAGAACCG...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGAGGATGCCGGTTCTTTTaGATGTTGCCCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGGCRFF*MLPSPC
Trigger: GCAGGGGGAGGGCAACATCAAAAAGAACCGGCATCC...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS CCA 90 bp CTGGTGGTTGTGGAAGCCGATGCTGGGCAGCAGGGGCGGAGCCAGTaGGGATGTCCTGTAAAAGCAGCTCTCCAGCAGGACCAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LVVVEADAGQQGRSQ*GCPVKAALQQDQVS
Trigger: AGAGACCTGGTCCTGCTGGAGAGCTGCTTTTACAGGACATCCCCACTGGCTCCGCCCCTGCTGCCCAGCATCGGCTTCCACAACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000412847.5
ENST00000423636.6
ENST00000440552.5
ENST00000442029.5
ENST00000446182.5
ENST00000462351.5
ENST00000476930.1
CDS CCA 90 bp GCTCCCTTGCTCTGGCAGCCTTGGCACCCTGGCCCTGCTGGGTGCTaGCAACTCCTGGGCCAGATAGAGCAGCCCAGAGTCTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: APLLWQPWHPGPAGC*QLLGQIEQPRVLKK
Trigger: CTTTTTCAAGACTCTGGGCTGCTCTATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 90 bp AGAGTGAGCAGCACTGAGCGCATGGGTGAGGTGCTGTGCGCAGTTTaGGGAAGGACTGCAGCTGCCTCCTCCCTCTGTCCCACTCCTGTC +
Preference number: 5 (lower is better)
Translates to: RVSSTERMGEVLCAV*GRTAAASSLCPTPV
Trigger: GACAGGAGTGGGACAGAGGGAGGAGGCAGCTGCAGTCCTTCCCCAAACTGCGCACAGCACCTCACCCATGCGCTCAGTGCTGCTCACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
ENST00000486480.1
ENST00000489650.1
CDS-3UTR CAA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGACAGGTTCTGCTCATaGTGCCGGATGCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALDRFCS*CRMRKV
Trigger: CACCTTCCGCATCCGGCACAATGAGCAGAACCTGTC...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGCACCAGCCCTGCTTGTaGGGTCACATCAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWHQPCL*GHISQR
Trigger: TCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGTG...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACACCAGCCCTGCTTGTaGGGTCACATCAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGHQPCL*GHISQR
Trigger: TCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGTG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGACTTCACCAGCCCTGCTaGTTGGGTCACATCAGCCAA +
Preference number: 5 (lower is better)
Translates to: PFLSSWLQHPHGMPWALGLHQPC*LGHISQ
Trigger: TTGGCTGATGTGACCCAACAAGCAGGGCTGGTGAAG...TCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACGGACCCTCTGCCCGGTaGAACAAGGACTTCGTGGCC +
Preference number: 5 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHGPSAR*NKDFVA
Trigger: GGCCACGAAGTCCTTGTTCAACCGGGCAGAGGGTCC...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATAGGGCCTGCCACTCCTaGGCAAGGCGGTCCCGGTTC +
Preference number: 5 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDRACHS*ARRSRF
Trigger: GAACCGGGACCGCCTTGCCAAGGAGTGGCAGGCCCT...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACCGGTGGCACAGGTGTTaGGCTCTGCTTGGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: PGVATLHPILPYWSIGGHRWHRC*ALLGRH
Trigger: GTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCG...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp GGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTAGGCTCTGGGTAGAATaGCTACCCATGTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GMPQALACEAGQACPFWLRLWVE*LPMSFP
Trigger: AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCT...AAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CAA 90 bp CTGGGATGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTCTAGAAATGTTCTCTaGCGCCAGAAGGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: LGCPRLWHARLGRRAPSGSRNVL*RQKERG
Trigger: ACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGA...GCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS TCA 90 bp GGCTGTTTTCCTCCCGACTCAGGCTCCAGTGGTCCTTACCAGTTGTaGCATCAGGCTGCCCTGGGCATAGTGTTCCCTGGGCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: GCFPPDSGSSGPYQL*HQAALGIVFPGPGE
Trigger: CTCCCCTGGCCCAGGGAACACTATGCCCAGGGCAGCCTGATGTCACAACTGGTAAGGACCACTGGAGCCTGAGTCGGGAGGAAAACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CCA 90 bp GGCCCTGCTGACCTCATATACGTGGTAGAGGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTGCTTGACACCATCCTCCACCAGCGG +
Preference number: 5 (lower is better)
Translates to: GPADLIYVVEGGTLI*PVAVTLLDTILHQR
Trigger: CCGCTGGTGGAGGATGGTGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGGTCAGCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CCA 90 bp TCTGCCGGCCAGCTCATATACGTGGTAGAGGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTGCTTGACACCATCCTCCACCAGCGG +
Preference number: 5 (lower is better)
Translates to: SAGQLIYVVEGGTLI*PVAVTLLDTILHQR
Trigger: CCGCTGGTGGAGGATGGTGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGCTGGCCGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497977.1
CDS-3UTR CAA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGTCCCCAAATATGCCCTaGGAGGCAGTTCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLSPNMP*EAVLLK
Trigger: CTTCAGCAGAACTGCCTCCAAGGGCATATTTGGGGA...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATCTTCACCAGCCCTGCTaGTTGGGTCACATCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDLHQPC*LGHISQ
Trigger: TTGGCTGATGTGACCCAACAAGCAGGGCTGGTGAAG...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS TCA 90 bp TGCGGGCATGGTCATAGGGCAGGAAGTCAGGATGCCGGTTCTTTTTaGTGTTGCCCTCCCCCTGCGCGGTGGCACAGGTGTTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: CGHGHRAGSQDAGSF*CCPPPARWHRCLAL
Trigger: CAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGGGCAACATCAAAAAGAACCGGCATCCTGACTTCCTGCCCTATGACCATGCCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS GCA 90 bp AAGGTCAGGCTTGCTCCAGCCCCATGTGGTCTCCATCCTCTGTCTTaGTCTGCCAAGCAGCAGGCAGGGCCCATGTGGGCTGGGAACATT +
Preference number: 5 (lower is better)
Translates to: KVRLAPAPCGLHPLS*SAKQQAGPMWAGNI
Trigger: AATGTTCCCAGCCCACATGGGCCCTGCCTGCTGCTTGGCAGAGCAAGACAGAGGATGGAGACCACATGGGGCTGGAGCAAGCCTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS CCA 90 bp CCAGTGGGCTTTTCTTCTCTAGCAGGACAGGTGTCACAGGGGGTCTaGCAGCTTTGGGAGGCTCAGAGGAGACAGGGCTTGGCACCTGCT +
Preference number: 5 (lower is better)
Translates to: PVGFSSLAGQVSQGV*QLWEAQRRQGLAPA
Trigger: AGCAGGTGCCAAGCCCTGTCTCCTCTGAGCCTCCCAAAGCTGCCAGACCCCCTGTGACACCTGTCCTGCTAGAGAAGAAAAGCCCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 90 bp GTTCTTTTTGATGTTGCCCTCCCCCTGCGCGGTGGCACAGGTGTTTaGCTCTGCTTGGTAGGCACAGAGGGCCTGCCACTCCTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: VLFDVALPLRGGTGV*LCLVGTEGLPLLGK
Trigger: CTTGCCAAGGAGTGGCAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGGGCAACATCAAAAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 90 bp GAGCCAGGGCTGGAGGCAAAGAACCAGAGCTGGTGTGGGTGGCATTaGGCTCGCCTTGTCACTTGCAAGCTAGGTGCCCAAGCTATGCAC +
Preference number: 5 (lower is better)
Translates to: EPGLEAKNQSWCGWH*ARLVTCKLGAQAMH
Trigger: GTGCATAGCTTGGGCACCTAGCTTGCAAGTGACAAGGCGAGCCCAATGCCACCCACACCAGCTCTGGTTCTTTGCCTCCAGCCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS-3UTR CAA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGTTTGCCCACTGGTGGTaGTGGAAGCCGATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VATLHPILPYWSIGGHTQFAHWW*WKPMLG
Trigger: GCCCAGCATCGGCTTCCACAACCACCAGTGGGCAAA...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp CTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGATTCCCCAAATATGCCCTaGGAGGCAGTTCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LSSPPGCSTPMGCPGLWDSPNMP*EAVLLK
Trigger: CTTCAGCAGAACTGCCTCCAAGGGCATATTTGGGGA...ATCCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACCACCAGCCCTGCTTGTaGGGTCACATCAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: PGVATLHPILPYWSIGGHHQPCL*GHISQR
Trigger: TCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGTG...GTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGGTGCTGTGCGCAGTTaGGGGAAGGACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTGAVRS*GKDCSC
Trigger: GCAGCTGCAGTCCTTCCCCAAACTGCGCACAGCACC...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGGGTGCTGTGCGCAGTTaGGGGAAGGACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMGAVRS*GKDCSC
Trigger: GCAGCTGCAGTCCTTCCCCAAACTGCGCACAGCACC...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGACAGGCGCTCCTTGTCTaGCTGCCGCGCATGCTGCCG +
Preference number: 5 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGQALLV*LPRMLP
Trigger: CGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCTG...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GGGGGAGCCGGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGTCTCCTTCACTCCTTTaGCCATGCGGTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: GGAGCGDPPPHSSILEHRSPSLL*PCGSGP
Trigger: TGGTCCTGAACCGCATGGCAAAAGGAGTGAAGGAGA...CCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCCGGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp TGTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGTCTCCTTCACTCCTTTaGCCATGCGGTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: CPFLSSWLQHPHGMPWALSPSLL*PCGSGP
Trigger: TGGTCCTGAACCGCATGGCAAAAGGAGTGAAGGAGA...CAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGAGGCTCTGGGTAGAATaGCTACCCATGTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWRLWVE*LPMSFP
Trigger: AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCT...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS-3UTR CAA 90 bp GTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGCCAGAAGGAGAGAGGTaGAGCAGCGCATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: VATLHPILPYWSIGGHTQPEGER*SSAWWE
Trigger: CTCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGG...CTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CAA 90 bp AGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGTTCAAACTGGTCCTTTaGCCATGCGGTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: RLWHARLGRRAPSGFPFLFKLVL*PCGSGP
Trigger: TGGTCCTGAACCGCATGGCAAAAGGACCAGTTTGAA...CAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443981.5
CDS GCA 90 bp AACTGGTCCTTAGAGCGGACAAGGCCAGGCCGCTGGTCACGGACATaGTCCAGGGTGGCAGCGATGTCAATCTCCTTCACTCCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: NWSLERTRPGRWSRT*SRVAAMSISFTPFA
Trigger: GGCAAAAGGAGTGAAGGAGATTGACATCGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGCCTTGTCCGCTCTAAGGACCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000460801.5
ENST00000462351.5
ENST00000497977.1
CDS CCA 90 bp CACCAGGTTCACCTCATATACGTGGTAGAGGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTGCTTGACACCATCCTCCACCAGCGG +
Preference number: 5 (lower is better)
Translates to: HQVHLIYVVEGGTLI*PVAVTLLDTILHQR
Trigger: CCGCTGGTGGAGGATGGTGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGGTGAACCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS CCA 90 bp AGAAAGGAGCCAGGGCTGGAGGCAAAGAACCAGAGCTGGTGTGGGTaGCATTGGGCTCGCCTTGTCACTTGCAAGCTAGGTGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: RKEPGLEAKNQSWCG*HWARLVTCKLGAQA
Trigger: AGCTTGGGCACCTAGCTTGCAAGTGACAAGGCGAGCCCAATGCCACCCACACCAGCTCTGGTTCTTTGCCTCCAGCCCTGGCTCCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CCA 90 bp CTCCATCCTCTGTCTTGCTCTGCCAAGCAGCAGGCAGGGCCCATGTaGGCTGGGAACATTTCAAGGGGGCATCAGCAACAGGCCTGGATA +
Preference number: 5 (lower is better)
Translates to: LHPLSCSAKQQAGPM*AGNISRGHQQQAWI
Trigger: TATCCAGGCCTGTTGCTGATGCCCCCTTGAAATGTTCCCAGCCCACATGGGCCCTGCCTGCTGCTTGGCAGAGCAAGACAGAGGATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS-3UTR CAA 90 bp GTCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGTCTAGAAATGTTCTCTaGCGCCAGAAGGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: VLSSPPGCSTPMGCPGLWSRNVL*RQKERG
Trigger: ACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGA...CCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS-3UTR CAA 90 bp GCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCTTCCTGACTCTAGAAATGTTCTCTaGCGCCAGAAGGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: ALACEAGQACPFWLSLPDSRNVL*RQKERG
Trigger: ACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGA...GTCAGGAAGGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS TCA 90 bp CCTTGGACCTCAGACCTTTCTCCACTGCCCCTGACCACAACTCAGTaGGGAGCAGGGGGCTTCTCCGTCTCTCAATGGACCCATCTAACC +
Preference number: 5 (lower is better)
Translates to: PWTSDLSPLPLTTTQ*GAGGFSVSQWTHLT
Trigger: GGTTAGATGGGTCCATTGAGAGACGGAGAAGCCCCCTGCTCCTCACTGAGTTGTGGTCAGGGGCAGTGGAGAAAGGTCTGAGGTCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS GCA 90 bp GCTGGTCCCACCACACTGATGTTGATGAAGCTGCCTGAGGACATGTaGACATGCTCAGCCAGGATCTCCAGCAGCTTCACTCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: AGPTTLMLMKLPEDM*TCSARISSSFTPAA
Trigger: GGCTGCAGGAGTGAAGCTGCTGGAGATCCTGGCTGAGCATGTGCACATGTCCTCAGGCAGCTTCATCAACATCAGTGTGGTGGGACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000423636.6
ENST00000462351.5
CDS GCA 90 bp TTCACCAGCCCTGCTTGTTGGGTCACATCAGCCAAAGACAGGTTCTaGTCATTGTGCCGGATGCGGAAGGTGAGGGCTGGTCCCACCACA +
Preference number: 5 (lower is better)
Translates to: FTSPACWVTSAKDRF*SLCRMRKVRAGPTT
Trigger: TGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
ENST00000486480.1
CDS GCA 90 bp CCTGCTTGTTGGGTCACATCAGCCAAAGACAGGTTCTGCTCATTGTaGCGGATGCGGAAGGTGAGGGCTGGTCCCACCACACTGCCAGAT +
Preference number: 5 (lower is better)
Translates to: PACWVTSAKDRFCSL*RMRKVRAGPTTLPD
Trigger: ATCTGGCAGTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486480.1
ENST00000489650.1
CDS GCA 90 bp CAGTTCAGACTTCACCAGCCCTGCAGGGAGGACAAAGGTCAGGCTTaGTCCAGCCCCATGTGGTCTCCATCCTCTGTCTTGCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: QFRLHQPCREDKGQA*SSPMWSPSSVLLCQ
Trigger: TTGGCAGAGCAAGACAGAGGATGGAGACCACATGGGGCTGGAGCAAGCCTGACCTTTGTCCTCCCTGCAGGGCTGGTGAAGTCTGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS CCA 90 bp TCCTCTGTCTTGCTCTGCCAAGCAGCAGGCAGGGCCCATGTGGGCTaGGAACATTTCAAGGGGGCATCAGCAACAGGCCTGGATATATCC +
Preference number: 5 (lower is better)
Translates to: SSVLLCQAAGRAHVG*EHFKGASATGLDIS
Trigger: GGATATATCCAGGCCTGTTGCTGATGCCCCCTTGAAATGTTCCCAGCCCACATGGGCCCTGCCTGCTGCTTGGCAGAGCAAGACAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS-3UTR CAA 90 bp TGCCCCAGGCTCTGGCATGCGAGGCTGGGCAGGCGTGCCCCTTCTGGCTTTCCCCCCTCCATTGTTTTCTaGATATCAGCTCCAACATTT +
Preference number: 5 (lower is better)
Translates to: CPRLWHARLGRRAPSGFPPSIVF*ISAPTF
Trigger: AAATGTTGGAGCTGATATCAAGAAAACAATGGAGGG...GGGAAAGCCAGAAGGGGCACGCCTGCCCAGCCTCGCATGCCAGAGCCTGGGGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp GGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGACAGGTTCTGCTCATaGTGCCGGATGCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GDPPPHSSILEHRGTHTDDRFCS*CRMRKV
Trigger: CACCTTCCGCATCCGGCACAATGAGCAGAACCTGTC...ATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp GGGTGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACTCCTGTCTGCAAGATTaGGAGCCCTGTCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GCGDPPPHSSILEHRGTHSCLQD*EPCLCF
Trigger: GAAGCACAGACAGGGCTCCAAATCTTGCAGACAGGA...GTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp CTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGGACCCTCTGCCCGGTaGAACAAGGACTTCGTGGCC +
Preference number: 5 (lower is better)
Translates to: LHPILPYWSIGGHTQMFRGPSAR*NKDFVA
Trigger: GGCCACGAAGTCCTTGTTCAACCGGGCAGAGGGTCC...CCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS TCA 90 bp CTGCTCAGGACCACTAGTAGCTTTTCCACCCAGACACAGCTATTGTaGGCCTCTCGAGGTCGGAGTTTCTCCTCCCTCTTCCTCGCAGGG +
Preference number: 5 (lower is better)
Translates to: LLRTTSSFSTQTQLL*ASRGRSFSSLFLAG
Trigger: CCCTGCGAGGAAGAGGGAGGAGAAACTCCGACCTCGAGAGGCTCACAATAGCTGTGTCTGGGTGGAAAAGCTACTAGTGGTCCTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS GCA 90 bp CCTGCTTGTTGGGTCACATCAGCCAAAGACAGGTTCTGCTCATTGTaGCGGATGCGGAAGGTGAGGGCTGGTCCCACCACACTGATGTTG +
Preference number: 5 (lower is better)
Translates to: PACWVTSAKDRFCSL*RMRKVRAGPTTLML
Trigger: CAACATCAGTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000423636.6
ENST00000462351.5
CDS GCA 90 bp CTCCCTCTGTCCCACTCCTGTCTGCAAGATTTGGAGCCCTGTCTGTaGTTCCAGTTCAGACTTCACCAGCCCTGCAGGGAGGACAAAGGT +
Preference number: 5 (lower is better)
Translates to: LPLSHSCLQDLEPCL*FQFRLHQPCREDKG
Trigger: ACCTTTGTCCTCCCTGCAGGGCTGGTGAAGTCTGAACTGGAAGCACAGACAGGGCTCCAAATCTTGCAGACAGGAGTGGGACAGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS-3UTR CAA 90 bp GCCAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGGTGCCAGGACAATCCTaGGGACATGAGTTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: ARPGNVGRRRLWVELLPMVPGQS*GHELSE
Trigger: CTCCGACAACTCATGTCCCAAGGATTGTCCTGGCAC...CATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCTGCCCCACTCCCACCTGGCACTGCCCAAACAAGCCATCCTGAATACAGACTTGTGCCAGGACAATCCTaGGGACATGAGTTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: PAPLPPGTAQTSHPEYRLVPGQS*GHELSE
Trigger: CTCCGACAACTCATGTCCCAAGGATTGTCCTGGCAC...AAGTCTGTATTCAGGATGGCTTGTTTGGGCAGTGCCAGGTGGGAGTGGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606213.5
CDS-3UTR CAA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCTTTCTTCCTGCACCCTaGGGCAGTAGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QARECRQEKALGRIATHVFLPAP*GSSCSR
Trigger: CCTGCTGCAGCTACTGCCCAAGGGTGCAGGAAGAAA...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCGATGTCCATGTTGGCTaGGGCCGGCTCCTCGCACCA +
Preference number: 5 (lower is better)
Translates to: RECRQEKALGRIATHVLSDVHVG*GRLLAP
Trigger: TGGTGCGAGGAGCCGGCCCAAGCCAACATGGACATC...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGACGGTGGCACAGGTGTTaGGCTCTGCTTGGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGRWHRC*ALLGRH
Trigger: GTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCG...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGACGGTTCTTTTTGATGTaGCCCTCCCCCTGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: PPHSSILEHRGTHTDVQGRFFLM*PSPCAV
Trigger: CACCGCGCAGGGGGAGGGCAACATCAAAAAGAACCG...TCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp CAGGCCAGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCGGATGCCGGTTCTTTTaGATGTTGCCCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: QARECRQEKALGRIATHVGCRFF*MLPSPC
Trigger: GCAGGGGGAGGGCAACATCAAAAAGAACCGGCATCC...GACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCTGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS TCA 90 bp CATCAGCCAAAGACAGGTTCTGCTCATTGTGCCGGATGCGGAAGGTaGGGGCTGGTCCCACCACACTGCCAGATAGGAGCTATGTTACTG +
Preference number: 5 (lower is better)
Translates to: HQPKTGSAHCAGCGR*GLVPPHCQIGAMLL
Trigger: CAGTAACATAGCTCCTATCTGGCAGTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486480.1
ENST00000489650.1
CDS GCA 90 bp CTCCCTCTGTCCCACTCCTGTCTGCAAGATTTGGAGCCCTGTCTGTaGTTCCAGTTCAGACTTCACCAGCCCTGCTTGTTGGGTCACATC +
Preference number: 5 (lower is better)
Translates to: LPLSHSCLQDLEPCL*FQFRLHQPCLLGHI
Trigger: GATGTGACCCAACAAGCAGGGCTGGTGAAGTCTGAACTGGAAGCACAGACAGGGCTCCAAATCTTGCAGACAGGAGTGGGACAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
ENST00000486480.1
CDS-3UTR CAA 90 bp TCCTTTCCTCTCCTCCTGGCTGCAGCACCCCCATGGGATGCCCTGGGCTCTGGGCCCTCCATTGTTTTCTaGATATCAGCTCCAACATTT +
Preference number: 5 (lower is better)
Translates to: SFPLLLAAAPPWDALGSGPSIVF*ISAPTF
Trigger: AAATGTTGGAGCTGATATCAAGAAAACAATGGAGGG...CCCAGAGCCCAGGGCATCCCATGGGGGTGCTGCAGCCAGGAGGAGAGGAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGATGTCCATGTTGGCTaGGGCCGGCTCCTCGCACCA +
Preference number: 5 (lower is better)
Translates to: FLEMFSCARRREVEQRMVDVHVG*GRLLAP
Trigger: TGGTGCGAGGAGCCGGCCCAAGCCAACATGGACATC...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS-3UTR CAA 90 bp TGTGGCGACCCTCCACCCCATTCTTCCATACTGGAGCATAGGGGGACACACACATCTCCTTCACTCCTTTaGCCATGCGGTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: CGDPPPHSSILEHRGTHTSPSLL*PCGSGP
Trigger: TGGTCCTGAACCGCATGGCAAAAGGAGTGAAGGAGA...TGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGGGTGGAGGGTCGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS GCA 90 bp GGGGCTGGGGCCAAGCCTGGGATTGAGGTCGCAGAGATATTTACCTaGTTGTTGGGTCACATCAGCCAAAGACAGGTTCTGCTCATTGTG +
Preference number: 5 (lower is better)
Translates to: GAGAKPGIEVAEIFT*LLGHISQRQVLLIV
Trigger: CACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGTAAATATCTCTGCGACCTCAATCCCAGGCTTGGCCCCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS CCA 90 bp ACCCCAACCCCTCAACTCGGGACATTGTGCTACTGCTTGTCTCCCTaGAGCAGTCTCACTTCAGCACAGGCATTCTGTGGCTGCGTTATA +
Preference number: 5 (lower is better)
Translates to: TPTPQLGTLCYCLSP*SSLTSAQAFCGCVI
Trigger: TATAACGCAGCCACAGAATGCCTGTGCTGAAGTGAGACTGCTCCAGGGAGACAAGCAGTAGCACAATGTCCCGAGTTGAGGGGTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS-3UTR CAA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTTTCTTCCTGCACCCTaGGGCAGTAGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RECRQEKALGRIATHVLSFLPAP*GSSCSR
Trigger: CCTGCTGCAGCTACTGCCCAAGGGTGCAGGAAGAAA...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCGGATGCCGGTTCTTTTaGATGTTGCCCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: RECRQEKALGRIATHVLSGCRFF*MLPSPC
Trigger: GCAGGGGGAGGGCAACATCAAAAAGAACCGGCATCC...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS GCA 90 bp AGTTCCAGCGGTCCCAGGAACCCTGGCTGCCTGTCACTTATCTACTaGTCAGGACCACTAGTAGCTTTTCCACCCAGACACAGCTATTGT +
Preference number: 5 (lower is better)
Translates to: SSSGPRNPGCLSLIY*SGPLVAFPPRHSYC
Trigger: ACAATAGCTGTGTCTGGGTGGAAAAGCTACTAGTGGTCCTGAGCAGTAGATAAGTGACAGGCAGCCAGGGTTCCTGGGACCGCTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS GCA 90 bp AGATATTTACCTGCTTGTTGGGTCACATCAGCCAAAGACAGGTTCTaGTCATTGTGCCGGATGCGGAAGGTGAGGGCTGGTCCCACCACA +
Preference number: 5 (lower is better)
Translates to: RYLPACWVTSAKDRF*SLCRMRKVRAGPTT
Trigger: TGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGTAAATATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS CCA 90 bp TCCCAGGCCGGTTCAAATTCTAAGTTCCAGCGGTCCCAGGAACCCTaGCTGCCTGTCACTTATCTACTGCTCAGGACCACTAGTAGCTTT +
Preference number: 5 (lower is better)
Translates to: SQAGSNSKFQRSQEP*LPVTYLLLRTTSSF
Trigger: AAAGCTACTAGTGGTCCTGAGCAGTAGATAAGTGACAGGCAGCCAGGGTTCCTGGGACCGCTGGAACTTAGAATTTGAACCGGCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CCA 90 bp GGGCCAAGCCTGGGATTGAGGTCGCAGAGATATTTACCTGCTTGTTaGGTCACATCAGCCAAAGACAGGTTCTGCTCATTGTGCCGGATG +
Preference number: 5 (lower is better)
Translates to: GPSLGLRSQRYLPAC*VTSAKDRFCSLCRM
Trigger: CATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGTAAATATCTCTGCGACCTCAATCCCAGGCTTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS-3UTR CAA 90 bp CTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGGGATCCTGTCTGCAAGATTaGGAGCCCTGTCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: LEMFSCARRREVEQRMVGSCLQD*EPCLCF
Trigger: GAAGCACAGACAGGGCTCCAAATCTTGCAGACAGGA...TCCCACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295718.7
ENST00000409251.7
CDS TCA 90 bp CTCATGGGGTTTGTCAGAGTAGAGGGACAAACTCAGTGGGTGATCTaGGCTGTCTTCTTCCCACCCTCAGGTACAGCTATTGGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LMGFVRVEGQTQWVI*AVFFPPSGTAIGAR
Trigger: TCTGGCTCCAATAGCTGTACCTGAGGGTGGGAAGAAGACAGCTCAGATCACCCACTGAGTTTGTCCCTCTACTCTGACAAACCCCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476930.1
CDS-3UTR CAA 90 bp AGGGAATGTAGGCAGGAGAAGGCTCTGGGTAGAATTGCTACCCATGTCCTTTCCTCCTGTCTGCAAGATTaGGAGCCCTGTCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: RECRQEKALGRIATHVLSSCLQD*EPCLCF
Trigger: GAAGCACAGACAGGGCTCCAAATCTTGCAGACAGGA...GGAAAGGACATGGGTAGCAATTCTACCCAGAGCCTTCTCCTGCCTACATTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS-3UTR CAA 90 bp TTTCTAGAAATGTTCTCTTGCGCCAGAAGGAGAGAGGTTGAGCAGCGCATGGTGAGGCTCTGGGTAGAATaGCTACCCATGTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: FLEMFSCARRREVEQRMVRLWVE*LPMSFP
Trigger: AGGAAAGGACATGGGTAGCAATTCTACCCAGAGCCT...CACCATGCGCTGCTCAACCTCTCTCCTTCTGGCGCAAGAGAACATTTCTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000443981.5
CDS TCA 90 bp TTGTCCTTTATGACCTTTCTGCTTTGGGAGTCACCTGCATACTCCTaGTATCCCTGCAAGCCAGAACCAGGGAAGACCTTCTTAGGGGTT +
Preference number: 5 (lower is better)
Translates to: LSFMTFLLWESPAYS*YPCKPEPGKTFLGV
Trigger: AACCCCTAAGAAGGTCTTCCCTGGTTCTGGCTTGCAGGGATATCAGGAGTATGCAGGTGACTCCCAAAGCAGAAAGGTCATAAAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS TCA 90 bp TTCTCCGTCTCTCAATGGACCCATCTAACCTGCCCTTGTCCTTTATaGCCTTTCTGCTTTGGGAGTCACCTGCATACTCCTGATATCCCT +
Preference number: 5 (lower is better)
Translates to: FSVSQWTHLTCPCPL*PFCFGSHLHTPDIP
Trigger: AGGGATATCAGGAGTATGCAGGTGACTCCCAAAGCAGAAAGGTCATAAAGGACAAGGGCAGGTTAGATGGGTCCATTGAGAGACGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS-3UTR CAA 90 bp CCCATTCTTCCATACTGGAGCATAGGGGGACACACACAGATGTTCAGGGAACTCCCCTCCATTGTTTTCTaGATATCAGCTCCAACATTT +
Preference number: 5 (lower is better)
Translates to: PILPYWSIGGHTQMFRELPSIVF*ISAPTF
Trigger: AAATGTTGGAGCTGATATCAAGAAAACAATGGAGGG...GAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGAAGAATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
CDS CCA 90 bp TTGGAACTTCACAGTCCTTCAGCTATAGGACCAGGTGACTTAGAATaGCTTCATAGGAGTCCACATGGTTTTCTAGCTCATTGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: LELHSPSAIGPGDLE*LHRSPHGFLAHWLL
Trigger: TAACAGCCAATGAGCTAGAAAACCATGTGGACTCCTATGAAGCCATTCTAAGTCACCTGGTCCTATAGCTGAAGGACTGTGAAGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CCA 90 bp CAGGTGCAGGGAGAGAGATTCATAGAATTACTGCAGGAGAGGTTTTaGCCAAATTCTGAAAGAGGAATTTCCTTCCCAAATATGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QVQGERFIELLQERF*PNSERGISFPNMEK
Trigger: CTTTTCCATATTTGGGAAGGAAATTCCTCTTTCAGAATTTGGCCAAAACCTCTCCTGCAGTAATTCTATGAATCTCTCTCCCTGCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462351.5
ENST00000477819.1
CDS CCA 90 bp GTGCTAGGTCTGGCACACAATAGGTGCTCAATACATGGTAGCAGGTaGCAACTATTAATGATAATACATCATCATATTAAGAGACACTTC +
Preference number: 5 (lower is better)
Translates to: VLGLAHNRCSIHGSR*QLLMIIHHHIKRHF
Trigger: GAAGTGTCTCTTAATATGATGATGTATTATCATTAATAGTTGCCACCTGCTACCATGTATTGAGCACCTATTGTGTGCCAGACCTAGCAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS TCA 90 bp AGAGAGATTCATAGAATTACTGCAGGAGAGGTTTTGGCCAAATTCTaGAAGAGGAATTTCCTTCCCAAATATGGAAAAGCATCCTATAAT +
Preference number: 5 (lower is better)
Translates to: REIHRITAGEVLAKF*KRNFLPKYGKASYN
Trigger: ATTATAGGATGCTTTTCCATATTTGGGAAGGAAATTCCTCTTTCAGAATTTGGCCAAAACCTCTCCTGCAGTAATTCTATGAATCTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477819.1
CDS CCA 90 bp AGAGCTAAATTAGGTTCAATTAACGTAGGTCTTAATCTCAGTCTTTaGGTATCCTTATCTTCCCTGTCTAATATACACTTAGCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: RAKLGSINVGLNLSL*VSLSSLSNIHLAVS
Trigger: GCTAACAGCTAAGTGTATATTAGACAGGGAAGATAAGGATACCCAAAGACTGAGATTAAGACCTACGTTAATTGAACCTAATTTAGCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS GCA 72 bp TGCCGCTCCCCACCTCCCTACGAGGCGGGGTCTACATaGCCCTCTCGCTGCAACGCGGCCAACCGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: CRSPPPYEAGST*PSRCNAANRRR
Trigger: CCGCCTGCGGTTGGCCGCGTTGCAGCGAGAGGGGCATGTAGACCCCGCCTCGTAGGGAGGTGGGGAGCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS GCA 72 bp GTCCAGCAGGGGCCGCGTGGAGGCCGGTGTGCCCTCTaGCGGCCAGCTGAGGAAGTGGAACTGCGTGAGCGT +
Preference number: 6 (lower is better)
Translates to: VQQGPRGGRCAL*RPAEEVELRER
Trigger: ACGCTCACGCAGTTCCACTTCCTCAGCTGGCCGGCAGAGGGCACACCGGCCTCCACGCGGCCCCTGCTGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
ENST00000462351.5
CDS GCA 72 bp TCAGGCCCCAGGGCTGCCAGGCGCTCCTTGTCTTGCTaGCGCGCATGCTGCCGCACACACAGAGCCACAGCC +
Preference number: 6 (lower is better)
Translates to: SGPRAARRSLSC*RACCRTHRATA
Trigger: GGCTGTGGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCTGGCAGCCCTGGGGCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
ENST00000486480.1
CDS GCA 72 bp CCTCCCTACGAGGCGGGGTCTACATGCCCCTCTCGCTaGAACGCGGCCAACCGCAGGCGGGTGCTGACGACA +
Preference number: 6 (lower is better)
Translates to: PPYEAGSTCPSR*NAANRRRVLTT
Trigger: TGTCGTCAGCACCCGCCTGCGGTTGGCCGCGTTGCAGCGAGAGGGGCATGTAGACCCCGCCTCGTAGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451506.5
CDS GCA 72 bp AGGGCTGCCAGGCGCTCCTTGTCTTGCTGCCGCGCATaGTGCCGCACACACAGAGCCACAGCCAGAGCCACC +
Preference number: 6 (lower is better)
Translates to: RAARRSLSCCRA*CRTHRATARAT
Trigger: GGTGGCTCTGGCTGTGGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCTGGCAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
ENST00000486480.1
CDS GCA 72 bp GCCCTCCCCCTGCGCGGTGGCACAGGTGTTTGGCTCTaGTTGGTAGGCACAGAGGGCCTGCCACTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: ALPLRGGTGVWL*LVGTEGLPLLG
Trigger: GCCAAGGAGTGGCAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CAA 90 bp CTTCTCATAGCCCTCTGGGGAGTCCTCTGCCCGGCTGCTGCTCCCTaGCTCTGGCAGCCTTGGCACCCTGGCCCTGCTGGGTGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: LLIALWGVLCPAAAP*LWQPWHPGPAGCWQ
Trigger: TTGCCAGCACCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGGACTCCCCAGAGGGCTATGAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CAA 90 bp GATGTTGCCCTCCCCCTGCGCGGTGGCACAGGTGTTTGGCTCTGCTaGGTAGGCACAGAGGGCCTGCCACTCCTTGGCAAGGCGGTCCCG +
Preference number: 6 (lower is better)
Translates to: DVALPLRGGTGVWLC*VGTEGLPLLGKAVP
Trigger: CGGGACCGCCTTGCCAAGGAGTGGCAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGGGCAACATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS GCA 72 bp CCTTCTCATAGCCCTCTGGGGAGTCCTCTGCCCGGCTaGTGCTCCCTTGCTCTGGCAGCCTTGGCACCCTGG +
Preference number: 6 (lower is better)
Translates to: PSHSPLGSPLPG*CSLALAALAPW
Trigger: CCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCAGCAGCCGGGCAGAGGACTCCCCAGAGGGCTATGAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 72 bp CAGAGAGGAGCTGGCCCCAGCTCCACCTTTGCCCACTaGTGGTTGTGGAAGCCGATGCTGGGCAGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: QRGAGPSSTFAH*WLWKPMLGSRG
Trigger: GCCCCTGCTGCCCAGCATCGGCTTCCACAACCACCAGTGGGCAAAGGTGGAGCTGGGGCCAGCTCCTCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000412847.5
ENST00000423636.6
ENST00000440552.5
ENST00000442029.5
ENST00000446182.5
ENST00000462351.5
ENST00000476930.1
CDS CCA 72 bp CTCTGGCAGCCTTGGCACCCTGGCCCTGCTGGGTGCTaGCAACTCCTGGGCCAGATAGAGCAGCCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: LWQPWHPGPAGC*QLLGQIEQPRV
Trigger: GACTCTGGGCTGCTCTATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 72 bp GCCTCCCAGGCGCCTCGGAGCAAGTGGCTTCTCCTGTaGTCTCGCAGCCGGTCTCTAAGTCCCTCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: ASQAPRSKWLLL*SRSRSLSPSAH
Trigger: GTGGGCAGAGGGACTTAGAGACCGGCTGCGAGACCACAGGAGAAGCCACTTGCTCCGAGGCGCCTGGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423636.6
ENST00000442029.5
ENST00000606213.5
CDS GCA 72 bp GAGGGGACAGAGAGGAGCTGGCCCCAGCTCCACCTTTaGCCACTGGTGGTTGTGGAAGCCGATGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: EGTERSWPQLHL*PLVVVEADAGQ
Trigger: CTGCCCAGCATCGGCTTCCACAACCACCAGTGGGCAAAGGTGGAGCTGGGGCCAGCTCCTCTCTGTCCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000412847.5
ENST00000423636.6
ENST00000440552.5
ENST00000442029.5
ENST00000446182.5
ENST00000462351.5
ENST00000476930.1
CDS GCA 72 bp TGCTCCCTTGCTCTGGCAGCCTTGGCACCCTGGCCCTaGTGGGTGCTGGCAACTCCTGGGCCAGATAGAGCA +
Preference number: 6 (lower is better)
Translates to: CSLALAALAPWP*WVLATPGPDRA
Trigger: TGCTCTATCTGGCCCAGGAGTTGCCAGCACCCAGCAGGGCCAGGGTGCCAAGGCTGCCAGAGCAAGGGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS GCA 72 bp TCAAATAGACAGCCTCCCTACGAGGCGGGGTCTACATaGCCCTCTCGCTGCAACGCGGCCAACCGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SNRQPPYEAGST*PSRCNAANRRR
Trigger: CCGCCTGCGGTTGGCCGCGTTGCAGCGAGAGGGGCATGTAGACCCCGCCTCGTAGGGAGGCTGTCTATTTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451506.5
CDS CCA 72 bp CCACCTTTGCCCACTGGTGGTTGTGGAAGCCGATGCTaGGCAGCAGGGGCGGAGCCAGTGGGGATGTCCTGT +
Preference number: 6 (lower is better)
Translates to: PPLPTGGCGSRC*AAGAEPVGMSC
Trigger: ACAGGACATCCCCACTGGCTCCGCCCCTGCTGCCCAGCATCGGCTTCCACAACCACCAGTGGGCAAAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000412847.5
ENST00000423636.6
ENST00000440552.5
ENST00000442029.5
ENST00000446182.5
ENST00000462351.5
ENST00000476930.1
CDS CCA 72 bp GCTCTGCTTGGTAGGCACAGAGGGCCTGCCACTCCTTaGCAAGGCGGTCCCGGTTCCGCAGGTGATCCTCCA +
Preference number: 6 (lower is better)
Translates to: ALLGRHRGPATP*QGGPGSAGDPP
Trigger: TGGAGGATCACCTGCGGAACCGGGACCGCCTTGCCAAGGAGTGGCAGGCCCTCTGTGCCTACCAAGCAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 72 bp GATGTTGCCCTCCCCCTGCGCGGTGGCACAGGTGTTTaGCTCTGCTTGGTAGGCACAGAGGGCCTGCCACTC +
Preference number: 6 (lower is better)
Translates to: DVALPLRGGTGV*LCLVGTEGLPL
Trigger: GAGTGGCAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGGGCAACATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS GCA 72 bp GCTTTGGGAGGCTCAGAGGAGACAGGGCTTGGCACCTaGTGGACTTCACTGGAGGTAGGGCTGGCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: ALGGSEETGLGT*WTSLEVGLAVG
Trigger: CCCCACTGCCAGCCCTACCTCCAGTGAAGTCCAGCAGGTGCCAAGCCCTGTCTCCTCTGAGCCTCCCAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 72 bp GTGGAAGCCGATGCTGGGCAGCAGGGGCGGAGCCAGTaGGGATGTCCTGTAAAAGCAGCTCTCCAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: VEADAGQQGRSQ*GCPVKAALQQD
Trigger: GTCCTGCTGGAGAGCTGCTTTTACAGGACATCCCCACTGGCTCCGCCCCTGCTGCCCAGCATCGGCTTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000412847.5
ENST00000423636.6
ENST00000440552.5
ENST00000442029.5
ENST00000446182.5
ENST00000462351.5
ENST00000476930.1
CDS GCA 72 bp AGAGTGAGCAGCACTGAGCGCATGGGTGAGGTGCTGTaGGCAGTTTGGGGAAGGACTGCAGCTGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RVSSTERMGEVL*AVWGRTAAASS
Trigger: GGAGGAGGCAGCTGCAGTCCTTCCCCAAACTGCGCACAGCACCTCACCCATGCGCTCAGTGCTGCTCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
ENST00000486480.1
ENST00000489650.1
CDS TCA 72 bp CCTCCCGACTCAGGCTCCAGTGGTCCTTACCAGTTGTaGCATCAGGCTGCCCTGGGCATAGTGTTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: PPDSGSSGPYQL*HQAALGIVFPG
Trigger: CCCAGGGAACACTATGCCCAGGGCAGCCTGATGTCACAACTGGTAAGGACCACTGGAGCCTGAGTCGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CCA 72 bp TCAAACTGGTCCTTAGAGCGGACAAGGCCAGGCCGCTaGTCACGGACATGCTCCAGGGTGGCAGCGATGTCA +
Preference number: 6 (lower is better)
Translates to: SNWSLERTRPGR*SRTCSRVAAMS
Trigger: TGACATCGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGCCTTGTCCGCTCTAAGGACCAGTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000460801.5
ENST00000462351.5
ENST00000497977.1
CDS CAA 90 bp GGAGCCAGGGCTGGAGGCAAAGAACCAGAGCTGGTGTGGGTGGCATaGGGCTCGCCTTGTCACTTGCAAGCTAGGTGCCCAAGCTATGCA +
Preference number: 6 (lower is better)
Translates to: GARAGGKEPELVWVA*GSPCHLQARCPSYA
Trigger: TGCATAGCTTGGGCACCTAGCTTGCAAGTGACAAGGCGAGCCCAATGCCACCCACACCAGCTCTGGTTCTTTGCCTCCAGCCCTGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS TCA 72 bp GGTCATAGGGCAGGAAGTCAGGATGCCGGTTCTTTTTaGTGTTGCCCTCCCCCTGCGCGGTGGCACAGGTGT +
Preference number: 6 (lower is better)
Translates to: GHRAGSQDAGSF*CCPPPARWHRC
Trigger: ACACCTGTGCCACCGCGCAGGGGGAGGGCAACATCAAAAAGAACCGGCATCCTGACTTCCTGCCCTATGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS GCA 72 bp TTAGAGCGGACAAGGCCAGGCCGCTGGTCACGGACATaGTCCAGGGTGGCAGCGATGTCAATCTCCTTCACT +
Preference number: 6 (lower is better)
Translates to: LERTRPGRWSRT*SRVAAMSISFT
Trigger: AGTGAAGGAGATTGACATCGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGCCTTGTCCGCTCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000460801.5
ENST00000462351.5
ENST00000497977.1
CDS CCA 72 bp GGTTCAGGAGTCTGGGGATCCAGTAACGGGGACCACTaGGGATCAGAACTGTACCCTCTGCCCTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: GSGVWGSSNGDH*GSELYPLPCSS
Trigger: TGAGCTGCAGGGCAGAGGGTACAGTTCTGATCCCCAGTGGTCCCCGTTACTGGATCCCCAGACTCCTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476930.1
CDS CAA 72 bp GCTGGAGGCAAAGAACCAGAGCTGGTGTGGGTGGCATaGGGCTCGCCTTGTCACTTGCAAGCTAGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: AGGKEPELVWVA*GSPCHLQARCP
Trigger: TGGGCACCTAGCTTGCAAGTGACAAGGCGAGCCCAATGCCACCCACACCAGCTCTGGTTCTTTGCCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CAA 90 bp CCAGTTCAGACTTCACCAGCCCTGCAGGGAGGACAAAGGTCAGGCTaGCTCCAGCCCCATGTGGTCTCCATCCTCTGTCTTGCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: PVQTSPALQGGQRSG*LQPHVVSILCLALP
Trigger: TGGCAGAGCAAGACAGAGGATGGAGACCACATGGGGCTGGAGCAAGCCTGACCTTTGTCCTCCCTGCAGGGCTGGTGAAGTCTGAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS CAA 90 bp AGCCCTGCTTGTTGGGTCACATCAGCCAAAGACAGGTTCTGCTCATaGTGCCGGATGCGGAAGGTGAGGGCTGGTCCCACCACACTGCCA +
Preference number: 6 (lower is better)
Translates to: SPACWVTSAKDRFCS*CRMRKVRAGPTTLP
Trigger: TGGCAGTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486480.1
CDS CAA 90 bp AGCCCTGCTTGTTGGGTCACATCAGCCAAAGACAGGTTCTGCTCATaGTGCCGGATGCGGAAGGTGAGGGCTGGTCCCACCACACTGATG +
Preference number: 6 (lower is better)
Translates to: SPACWVTSAKDRFCS*CRMRKVRAGPTTLM
Trigger: CATCAGTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295718.7
ENST00000423636.6
ENST00000462351.5
CDS CAA 90 bp GGGAGGACAACCCCAACCCCTCAACTCGGGACATTGTGCTACTGCTaGTCTCCCTGGAGCAGTCTCACTTCAGCACAGGCATTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: GRTTPTPQLGTLCYC*SPWSSLTSAQAFCG
Trigger: GCCACAGAATGCCTGTGCTGAAGTGAGACTGCTCCAGGGAGACAAGCAGTAGCACAATGTCCCGAGTTGAGGGGTTGGGGTTGTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS TCA 72 bp TCAGACCTTTCTCCACTGCCCCTGACCACAACTCAGTaGGGAGCAGGGGGCTTCTCCGTCTCTCAATGGACC +
Preference number: 6 (lower is better)
Translates to: SDLSPLPLTTTQ*GAGGFSVSQWT
Trigger: GGTCCATTGAGAGACGGAGAAGCCCCCTGCTCCTCACTGAGTTGTGGTCAGGGGCAGTGGAGAAAGGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS TCA 72 bp TCCCACATCCATTGTCCCCTTGCTGTGGGGCCCTGCTaGCCTCATATACGTGGTAGAGGGAGGCACCCTCAT +
Preference number: 6 (lower is better)
Translates to: SHIHCPLAVGPC*PHIRGRGRHPH
Trigger: ATGAGGGTGCCTCCCTCTACCACGTATATGAGGTCAGCAGGGCCCCACAGCAAGGGGACAATGGATGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS TCA 72 bp AAGACAGGTTCTGCTCATTGTGCCGGATGCGGAAGGTaGGGGCTGGTCCCACCACACTGCCAGATAGGAGCT +
Preference number: 6 (lower is better)
Translates to: KTGSAHCAGCGR*GLVPPHCQIGA
Trigger: AGCTCCTATCTGGCAGTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486480.1
ENST00000489650.1
CDS GCA 72 bp CGCTCCGAGAAGGGCTGCTCTCCACCTTCAGTTTTATaGGGGCATGGTCATAGGGCAGGAAGTCAGGATGCC +
Preference number: 6 (lower is better)
Translates to: RSEKGCSPPSVL*GHGHRAGSQDA
Trigger: GGCATCCTGACTTCCTGCCCTATGACCATGCCCGCATAAAACTGAAGGTGGAGAGCAGCCCTTCTCGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CAA 72 bp GAGCTGGTGTGGGTGGCATTGGGCTCGCCTTGTCACTaGCAAGCTAGGTGCCCAAGCTATGCACCTGGAACA +
Preference number: 6 (lower is better)
Translates to: ELVWVALGSPCH*QARCPSYAPGT
Trigger: TGTTCCAGGTGCATAGCTTGGGCACCTAGCTTGCAAGTGACAAGGCGAGCCCAATGCCACCCACACCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CAA 90 bp TTACCTGCTTGTTGGGTCACATCAGCCAAAGACAGGTTCTGCTCATaGTGCCGGATGCGGAAGGTGAGGGCTGGTCCCACCACACTGCCA +
Preference number: 6 (lower is better)
Translates to: LPACWVTSAKDRFCS*CRMRKVRAGPTTLP
Trigger: TGGCAGTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS GCA 72 bp GCCTGCGGTCAAATAGACAGCCTTCCTCATCTCGCATaGCTCCCCCAACCCATATTCTCCCCGAGCTTCATG +
Preference number: 6 (lower is better)
Translates to: ACGQIDSLPHLA*LPQPIFSPSFM
Trigger: CATGAAGCTCGGGGAGAATATGGGTTGGGGGAGGCATGCGAGATGAGGAAGGCTGTCTATTTGACCGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440552.5
CDS GCA 72 bp CATCCTGAATACAGACTTCCAGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCTCCCTACGAGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: HPEYRLPGESRA*GQIDSLPTRRG
Trigger: ACCCCGCCTCGTAGGGAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTATTCAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451506.5
CDS GCA 72 bp TCCCACTCCTGTCTGCAAGATTTGGAGCCCTGTCTGTaGTTCCAGTTCAGACTTCACCAGCCCTGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: SHSCLQDLEPCL*FQFRLHQPCRE
Trigger: CTCCCTGCAGGGCTGGTGAAGTCTGAACTGGAAGCACAGACAGGGCTCCAAATCTTGCAGACAGGAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS CCA 72 bp TTTTCTTCTCTAGCAGGACAGGTGTCACAGGGGGTCTaGCAGCTTTGGGAGGCTCAGAGGAGACAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: FSSLAGQVSQGV*QLWEAQRRQGL
Trigger: CAAGCCCTGTCTCCTCTGAGCCTCCCAAAGCTGCCAGACCCCCTGTGACACCTGTCCTGCTAGAGAAGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 72 bp TCTGCCCGGTTGAACAAGGACTTCGTGGCCATGTGCTaGCGGCACAGGTCCTGGTACTCAAAGGTAGTGTCA +
Preference number: 6 (lower is better)
Translates to: SARLNKDFVAMC*RHRSWYSKVVS
Trigger: TGACACTACCTTTGAGTACCAGGACCTGTGCCGCCAGCACATGGCCACGAAGTCCTTGTTCAACCGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
CDS CCA 72 bp CACCTCATATACGTGGTAGAGGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTGCTTGACACCATCCTC +
Preference number: 6 (lower is better)
Translates to: HLIYVVEGGTLI*PVAVTLLDTIL
Trigger: GAGGATGGTGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000443981.5
CDS CCA 72 bp GTTCTGCTCATTGTGCCGGATGCGGAAGGTGAGGGCTaGTCCCACCACATTCTGATCAGTGACGATGTAGCC +
Preference number: 6 (lower is better)
Translates to: VLLIVPDAEGEG*SHHILISDDVA
Trigger: GGCTACATCGTCACTGATCAGAATGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409251.7
CDS CCA 72 bp GACCTCATATACGTGGTAGAGGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTGCTTGACACCATCCTC +
Preference number: 6 (lower is better)
Translates to: DLIYVVEGGTLI*PVAVTLLDTIL
Trigger: GAGGATGGTGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CCA 72 bp CAGCTCATATACGTGGTAGAGGGAGGCACCCTCATCTaGCCAGTAGCGGTCACACTGCTTGACACCATCCTC +
Preference number: 6 (lower is better)
Translates to: QLIYVVEGGTLI*PVAVTLLDTIL
Trigger: GAGGATGGTGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCCCTCTACCACGTATATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497977.1
CDS CAA 72 bp ACCCCAACCCCTCAACTCGGGACATTGTGCTACTGCTaGTCTCCCTGGAGCAGTCTCACTTCAGCACAGGCA +
Preference number: 6 (lower is better)
Translates to: TPTPQLGTLCYC*SPWSSLTSAQA
Trigger: TGCCTGTGCTGAAGTGAGACTGCTCCAGGGAGACAAGCAGTAGCACAATGTCCCGAGTTGAGGGGTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS GCA 72 bp CATCCTGAATACAGACTTCCAGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCTAGCCCATCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: HPEYRLPGESRA*GQIDSLAHPSS
Trigger: GGAGGAGGGATGGGCTAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTATTCAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446182.5
CDS GCA 72 bp ACAACCCCAACCCCTCAACTCGGGACATTGTGCTACTaGTTGTCTCCCTGGAGCAGTCTCACTTCAGCACAG +
Preference number: 6 (lower is better)
Translates to: TTPTPQLGTLCY*LSPWSSLTSAQ
Trigger: CTGTGCTGAAGTGAGACTGCTCCAGGGAGACAAGCAGTAGCACAATGTCCCGAGTTGAGGGGTTGGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS GCA 72 bp CTGGTGACTTCAAGGGTGTCAGTCTTGCCACATCCCTaGTCTGGCCCTCTGCCATTCTTTATGACCACCCAG +
Preference number: 6 (lower is better)
Translates to: LVTSRVSVLPHP*SGPLPFFMTTQ
Trigger: CTGGGTGGTCATAAAGAATGGCAGAGGGCCAGAGCAGGGATGTGGCAAGACTGACACCCTTGAAGTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS GCA 72 bp GGTCCCAGGAACCCTGGCTGCCTGTCACTTATCTACTaGTCAGGACCACTAGTAGCTTTTCCACCCAGACAC +
Preference number: 6 (lower is better)
Translates to: GPRNPGCLSLIY*SGPLVAFPPRH
Trigger: GTGTCTGGGTGGAAAAGCTACTAGTGGTCCTGAGCAGTAGATAAGTGACAGGCAGCCAGGGTTCCTGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CCA 72 bp CCTCAACTCGGGACATTGTGCTACTGCTTGTCTCCCTaGAGCAGTCTCACTTCAGCACAGGCATTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: PQLGTLCYCLSP*SSLTSAQAFCG
Trigger: GCCACAGAATGCCTGTGCTGAAGTGAGACTGCTCCAGGGAGACAAGCAGTAGCACAATGTCCCGAGTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CAA 72 bp CCAGGACAATCCTGTCAGGAAAGAGGACAGCGTAAGTaGGTTCAGGAGTCTGGGGATCCAGTAACGGGGACC +
Preference number: 6 (lower is better)
Translates to: PGQSCQERGQRK*VQESGDPVTGT
Trigger: GGTCCCCGTTACTGGATCCCCAGACTCCTGAACCAACTTACGCTGTCCTCTTTCCTGACAGGATTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476930.1
CDS CAA 90 bp GCTGGGGCCAAGCCTGGGATTGAGGTCGCAGAGATATTTACCTGCTaGTTGGGTCACATCAGCCAAAGACAGGTTCTGCTCATTGTGCCG +
Preference number: 6 (lower is better)
Translates to: AGAKPGIEVAEIFTC*LGHISQRQVLLIVP
Trigger: CGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGTAAATATCTCTGCGACCTCAATCCCAGGCTTGGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS GCA 72 bp TCCCACTCCTGTCTGCAAGATTTGGAGCCCTGTCTGTaGTTCCAGTTCAGACTTCACCAGCCCTGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SHSCLQDLEPCL*FQFRLHQPCLL
Trigger: CAACAAGCAGGGCTGGTGAAGTCTGAACTGGAAGCACAGACAGGGCTCCAAATCTTGCAGACAGGAGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295718.7
ENST00000409251.7
ENST00000423636.6
ENST00000462351.5
ENST00000486480.1
CDS GCA 72 bp TGGAGCAGTCTCACTTCAGCACAGGCATTCTGTGGCTaGGTTATATTCAGACTTGGGGTCCCCTTGGACCTC +
Preference number: 6 (lower is better)
Translates to: WSSLTSAQAFCG*VIFRLGVPLDL
Trigger: GAGGTCCAAGGGGACCCCAAGTCTGAATATAACGCAGCCACAGAATGCCTGTGCTGAAGTGAGACTGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CCA 72 bp TCCCTGGAGCAGTCTCACTTCAGCACAGGCATTCTGTaGCTGCGTTATATTCAGACTTGGGGTCCCCTTGGA +
Preference number: 6 (lower is better)
Translates to: SLEQSHFSTGIL*LRYIQTWGPLG
Trigger: TCCAAGGGGACCCCAAGTCTGAATATAACGCAGCCACAGAATGCCTGTGCTGAAGTGAGACTGCTCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CAA 72 bp AGGCCATCATCTACTCTTCCCACATCCATTGTCCCCTaGCTGTGGGGCCCTGCTGACCTCATATACGTGGTA +
Preference number: 6 (lower is better)
Translates to: RPSSTLPTSIVP*LWGPADLIYVV
Trigger: TACCACGTATATGAGGTCAGCAGGGCCCCACAGCAAGGGGACAATGGATGTGGGAAGAGTAGATGATGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CAA 90 bp AGCAGGGGGCTTCTCCGTCTCTCAATGGACCCATCTAACCTGCCCTaGTCCTTTATGACCTTTCTGCTTTGGGAGTCACCTGCATACTCC +
Preference number: 6 (lower is better)
Translates to: SRGLLRLSMDPSNLP*SFMTFLLWESPAYS
Trigger: GGAGTATGCAGGTGACTCCCAAAGCAGAAAGGTCATAAAGGACAAGGGCAGGTTAGATGGGTCCATTGAGAGACGGAGAAGCCCCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CAA 90 bp GGGGCCAAGCCTGGGATTGAGGTCGCAGAGATATTTACCTGCTTGTaGGGTCACATCAGCCAAAGACAGGTTCTGCTCATTGTGCCGGAT +
Preference number: 6 (lower is better)
Translates to: GAKPGIEVAEIFTCL*GHISQRQVLLIVPD
Trigger: ATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGTAAATATCTCTGCGACCTCAATCCCAGGCTTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS TCA 72 bp ACACTTCTGCCCAAGTCCAAGGGGATAGCTTTCTGGTaGCTTCAAGGGTGTCAGTCTTGCCACATCCCTGCT +
Preference number: 6 (lower is better)
Translates to: TLLPKSKGIAFW*LQGCQSCHIPA
Trigger: AGCAGGGATGTGGCAAGACTGACACCCTTGAAGTCACCAGAAAGCTATCCCCTTGGACTTGGGCAGAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS GCA 72 bp CATCCTGAATACAGACTTCCAGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCTTCCTCATCTCGCATGC +
Preference number: 6 (lower is better)
Translates to: HPEYRLPGESRA*GQIDSLPHLAC
Trigger: GCATGCGAGATGAGGAAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTATTCAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440552.5
CDS CCA 72 bp GGTTCAAATTCTAAGTTCCAGCGGTCCCAGGAACCCTaGCTGCCTGTCACTTATCTACTGCTCAGGACCACT +
Preference number: 6 (lower is better)
Translates to: GSNSKFQRSQEP*LPVTYLLLRTT
Trigger: AGTGGTCCTGAGCAGTAGATAAGTGACAGGCAGCCAGGGTTCCTGGGACCGCTGGAACTTAGAATTTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS TCA 72 bp ATGACCTTTCTGCTTTGGGAGTCACCTGCATACTCCTaGTATCCCTGCAAGCCAGAACCAGGGAAGACCTTC +
Preference number: 6 (lower is better)
Translates to: MTFLLWESPAYS*YPCKPEPGKTF
Trigger: GAAGGTCTTCCCTGGTTCTGGCTTGCAGGGATATCAGGAGTATGCAGGTGACTCCCAAAGCAGAAAGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS GCA 72 bp CATCCTGAATACAGACTTCCAGGTGAGAGCAGAGCCTaGGGTCAAATAGACAGCCTGCAATTTTCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: HPEYRLPGESRA*GQIDSLQFSPE
Trigger: CTCTGGGGAAAATTGCAGGCTGTCTATTTGACCGCAGGCTCTGCTCTCACCTGGAAGTCTGTATTCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412847.5
CDS GCA 72 bp GCCAAGCCTGGGATTGAGGTCGCAGAGATATTTACCTaGTTGTTGGGTCACATCAGCCAAAGACAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: AKPGIEVAEIFT*LLGHISQRQVL
Trigger: CAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGTAAATATCTCTGCGACCTCAATCCCAGGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS GCA 72 bp CTTGTCCTTTATGACCTTTCTGCTTTGGGAGTCACCTaGATACTCCTGATATCCCTGCAAGCCAGAACCAGG +
Preference number: 6 (lower is better)
Translates to: LVLYDLSALGVT*ILLISLQARTR
Trigger: CCTGGTTCTGGCTTGCAGGGATATCAGGAGTATGCAGGTGACTCCCAAAGCAGAAAGGTCATAAAGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CAA 72 bp CTTCTCCGTCTCTCAATGGACCCATCTAACCTGCCCTaGTCCTTTATGACCTTTCTGCTTTGGGAGTCACCT +
Preference number: 6 (lower is better)
Translates to: LLRLSMDPSNLP*SFMTFLLWESP
Trigger: AGGTGACTCCCAAAGCAGAAAGGTCATAAAGGACAAGGGCAGGTTAGATGGGTCCATTGAGAGACGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CAA 72 bp AAGCCTGGGATTGAGGTCGCAGAGATATTTACCTGCTaGTTGGGTCACATCAGCCAAAGACAGGTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: KPGIEVAEIFTC*LGHISQRQVLL
Trigger: GAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGTAAATATCTCTGCGACCTCAATCCCAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489650.1
CDS TCA 72 bp TTTGTCTTAGTGGGGACTCACGTTCTCCCATTTGTCTaGAATATTTCTCTTTCCCCTGCTTGGCCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: FVLVGTHVLPFV*NISLSPAWPLP
Trigger: GGGCAGAGGCCAAGCAGGGGAAAGAGAAATATTTCAGACAAATGGGAGAACGTGAGTCCCCACTAAGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS TCA 72 bp CTCAGGTACAGCTATTGGAGCCAGACCACCTGGGTTTaGATCCTGCCTTTGCTACTGATGAATTATGTAACC +
Preference number: 6 (lower is better)
Translates to: LRYSYWSQTTWV*ILPLLLMNYVT
Trigger: GGTTACATAATTCATCAGTAGCAAAGGCAGGATTCAAACCCAGGTGGTCTGGCTCCAATAGCTGTACCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476930.1
CDS CAA 72 bp CCTCAGGTACAGCTATTGGAGCCAGACCACCTGGGTTaGAATCCTGCCTTTGCTACTGATGAATTATGTAAC +
Preference number: 6 (lower is better)
Translates to: PQVQLLEPDHLG*NPAFATDELCN
Trigger: GTTACATAATTCATCAGTAGCAAAGGCAGGATTCAAACCCAGGTGGTCTGGCTCCAATAGCTGTACCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476930.1
CDS CCA 72 bp CACAGTCCTTCAGCTATAGGACCAGGTGACTTAGAATaGCTTCATAGGAGTCCACATGGTTTTCTAGCTCAT +
Preference number: 6 (lower is better)
Translates to: HSPSAIGPGDLE*LHRSPHGFLAH
Trigger: ATGAGCTAGAAAACCATGTGGACTCCTATGAAGCCATTCTAAGTCACCTGGTCCTATAGCTGAAGGACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460801.5
CDS CAA 72 bp CTCTGTGCCTTTATCATAAGTCTCTATGAACGCTTTTaGACTCTAGACAGGACACACACACACACACACACA +
Preference number: 6 (lower is better)
Translates to: LCAFIISLYERF*TLDRTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTCCTGTCTAGAGTCAAAAAGCGTTCATAGAGACTTATGATAAAGGCACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CAA 72 bp GTAACGTATGTAACGGGTGGTATGTCTTTCTTTGCTTaGGCCACCAGGAAACTCAGAGCTAAATTAGGTTCA +
Preference number: 6 (lower is better)
Translates to: VTYVTGGMSFFA*ATRKLRAKLGS
Trigger: TGAACCTAATTTAGCTCTGAGTTTCCTGGTGGCCAAAGCAAAGAAAGACATACCACCCGTTACATACGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CCA 72 bp GGAGAGAGATTCATAGAATTACTGCAGGAGAGGTTTTaGCCAAATTCTGAAAGAGGAATTTCCTTCCCAAAT +
Preference number: 6 (lower is better)
Translates to: GERFIELLQERF*PNSERGISFPN
Trigger: ATTTGGGAAGGAAATTCCTCTTTCAGAATTTGGCCAAAACCTCTCCTGCAGTAATTCTATGAATCTCTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462351.5
ENST00000477819.1
CDS CCA 72 bp TTGTTTCTCTTTTACATTAGTAACGTATGTAACGGGTaGTATGTCTTTCTTTGCTTTGGCCACCAGGAAACT +
Preference number: 6 (lower is better)
Translates to: LFLFYISNVCNG*YVFLCFGHQET
Trigger: AGTTTCCTGGTGGCCAAAGCAAAGAAAGACATACCACCCGTTACATACGTTACTAATGTAAAAGAGAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CAA 90 bp TTTACATTAGTAACGTATGTAACGGGTGGTATGTCTTTCTTTGCTTaGGCCACCAGGAAACTCAGAGCTAAATTAGGTTCAATTAACGTA +
Preference number: 6 (lower is better)
Translates to: FTLVTYVTGGMSFFA*ATRKLRAKLGSINV
Trigger: TACGTTAATTGAACCTAATTTAGCTCTGAGTTTCCTGGTGGCCAAAGCAAAGAAAGACATACCACCCGTTACATACGTTACTAATGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462351.5
CDS CCA 72 bp AATATACACTTAGCTGTTAGCTTCTTACCTCGGTTTTaGTGGTTTTATAGTTTGATCTCTGTGCCTTTATCA +
Preference number: 6 (lower is better)
Translates to: NIHLAVSFLPRF*WFYSLISVPLS
Trigger: TGATAAAGGCACAGAGATCAAACTATAAAACCACCAAAACCGAGGTAAGAAGCTAACAGCTAAGTGTATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462351.5