RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRM (Homo sapiens)

Ensembl gene IDs: ENSG00000173482

Ensembl transcript IDs: ENST00000332175.12, ENST00000400053.8, ENST00000400060.8, ENST00000577468.2, ENST00000577827.5, ENST00000578093.1, ENST00000578571.5, ENST00000578600.1, ENST00000578698.1, ENST00000578916.2, ENST00000580170.6, ENST00000580838.1, ENST00000580949.1, ENST00000583153.2, ENST00000583289.5

Found 921 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCGGTaGCAAGGAGTACGGGATTTGGCAACTGTGGCTGTGTGTGTGTTT +
Preference number: 1 (lower is better)
Translates to: VLFSLPAVYAALGSR*QGVRDLATVAVCVF
Trigger: AAACACACACACAGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR CCA 90 bp ATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTaGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACC +
Preference number: 1 (lower is better)
Translates to: IEKSSSLLHKYHGTS*LCGMKGIVCRAVYT
Trigger: GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTAGGCAGCAGCATTACTaGGATTGGGCAGTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: YAALGSRWQGVRDLATVARQQHY*DWAVQA
Trigger: TGCTTGCACTGCCCAATCCCAGTAATGCTGCTGCCT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCTTGGCTTTGTGGTATaGAAGGGATTGTTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: YAALGSRWQGVRDLATVALGFVV*KGLFAE
Trigger: CTCTGCAAACAATCCCTTTCATACCACAAAGCCAAG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAACCAGCTGTCTACGCTaGTCTAGGAAGCCGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVTSCLR*SRKPVA
Trigger: TGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGGT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAAACGTCTTGGCTTTGTaGTATGAAAGGGATTGTTTG +
Preference number: 2 (lower is better)
Translates to: PAVYAALGSRWQGVRDLANVLAL*YERDCL
Trigger: CAAACAATCCCTTTCATACCACAAAGCCAAGACGTT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCTTGGCTTTGTGGTATaGAAGGGATTGTTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHLGFVV*KGLFAE
Trigger: CTCTGCAAACAATCCCTTTCATACCACAAAGCCAAG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCAGCATTACTGGGATTaGGCAGTGCAAGCAATTTTA +
Preference number: 2 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSQHYWD*AVQAIL
Trigger: TAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAACGTCTTGGCTTTGTaGTATGAAAGGGATTGTTTG +
Preference number: 2 (lower is better)
Translates to: QHYWDWAVQAILETLSWANVLAL*YERDCL
Trigger: CAAACAATCCCTTTCATACCACAAAGCCAAGACGTT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCAACGTCTTGGCTTTGTaGTATGAAAGGGATTGTTTG +
Preference number: 2 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSNVLAL*YERDCL
Trigger: CAAACAATCCCTTTCATACCACAAAGCCAAGACGTT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCAGTCTTCATCTCTTTTaGACAAATACCATGGAACGT +
Preference number: 2 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSSLHLF*TNTMER
Trigger: ACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR CAA 90 bp AATTATGCAAAGCAAAATAAGCATATTGAGAAGTCTTCATCTCTTTaGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGG +
Preference number: 2 (lower is better)
Translates to: NYAKQNKHIEKSSSL*HKYHGTSWLCGMKG
Trigger: CCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATGCTTATTTTGCTTTGCATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR CCA 72 bp AGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCGGTaGCAAGGAGTACGGGATTTGGCAACTGTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: SLPAVYAALGSR*QGVRDLATVAV
Trigger: CACAGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGGTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAATACCATGGAACGTCTaGGCTTTGTGGTATGAAAGG +
Preference number: 3 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAIPWNV*ALWYER
Trigger: CCTTTCATACCACAAAGCCAAGACGTTCCATGGTAT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGCAGCATTACTGGGATaGGGCAGTGCAAGCAATTTT +
Preference number: 3 (lower is better)
Translates to: YAALGSRWQGVRDLATVAAALLG*GSASNF
Trigger: AAAATTGCTTGCACTGCCCAATCCCAGTAATGCTGC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR GCA 72 bp TATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTaGTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTT +
Preference number: 3 (lower is better)
Translates to: YSCALQFTSCLR*SRKPVARSTGF
Trigger: AAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCAAGGAGTACGGGATTaGGCAACTGTGGCTGTGTGT +
Preference number: 3 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSQGVRD*ATVAVC
Trigger: ACACACAGCCACAGTTGCCAAATCCCGTACTCCTTG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTGGAACGTCTTGGCTTaGTGGTATGAAAGGGATTGT +
Preference number: 3 (lower is better)
Translates to: QHYWDWAVQAILETLSWAWNVLA*WYERDC
Trigger: ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTGGAACGTCTTGGCTTaGTGGTATGAAAGGGATTGT +
Preference number: 3 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSWNVLA*WYERDC
Trigger: ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAATACCATGGAACGTCTaGGCTTTGTGGTATGAAAGG +
Preference number: 3 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQIPWNV*ALWYER
Trigger: CCTTTCATACCACAAAGCCAAGACGTTCCATGGTAT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTATACCATGGAACGTCTaGGCTTTGTGGTATGAAAGG +
Preference number: 3 (lower is better)
Translates to: QHYWDWAVQAILETLSWAIPWNV*ALWYER
Trigger: CCTTTCATACCACAAAGCCAAGACGTTCCATGGTAT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGCAGCATTACTGGGATaGGGCAGTGCAAGCAATTTT +
Preference number: 3 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHAALLG*GSASNF
Trigger: AAAATTGCTTGCACTGCCCAATCCCAGTAATGCTGC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAAGTCTTCATCTCTTTaGCACAAATACCATGGAACG +
Preference number: 3 (lower is better)
Translates to: QHYWDWAVQAILETLSWAKSSSL*HKYHGT
Trigger: CGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAAGTCTTCATCTCTTTaGCACAAATACCATGGAACG +
Preference number: 3 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQKSSSL*HKYHGT
Trigger: CGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR CCA 72 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTaGTATGAAAGGGATTGTTTGCAGAGCTGTTTACAC +
Preference number: 3 (lower is better)
Translates to: SFAQIPWNVLAL*YERDCLQSCLH
Trigger: GTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR CCA 72 bp TCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTaGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: SSSLLHKYHGTS*LCGMKGIVCRA
Trigger: AGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
3UTR-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATAAGTCTTCATCTCTTTaGCACAAATACCATGGAACG +
Preference number: 3 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHKSSSL*HKYHGT
Trigger: CGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACTCTTGCTCCCCGACTaGCTGGCGGTGCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLALLLPD*LAVPRR
Trigger: CCTGCGGGGCACCGCCAGTCAGTCGGGGAGCAAGAG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGCCCCACTCGGCGTCTaGCGCCGCTGGCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAAPLGV*RRWQRE
Trigger: CTCCCTCTGCCAGCGGCGCCAGACGCCGAGTGGGGC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATGGCTCTGGGGAGGGTaGCTGTGGAAGAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAWLWGG*LWKRLR
Trigger: GCGCAGCCTCTTCCACAGTCACCCTCCCCAGAGCCA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGTGCTGAAGGAGGTCTaGCACCCGGATGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAVLKEV*HPDGGV
Trigger: CACCCCGCCATCCGGGTGGCAGACCTCCTTCAGCAC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTAAAGAGGCAGCCACCTaGGAACGTCTCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAKEAAT*ERLARR
Trigger: GCGGCGGGCGAGACGTTCTCAGGTGGCTGCCTCTTT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAAGCAGGTGGGCTCTCTaGCCCTCAGGTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLASRWAL*PSGLPE
Trigger: CTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACTCCTGCCACGGTCCTaGCGATGGCACTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLALLPRS*RWHCTG
Trigger: TCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCGCAGAACGTCCCACTaGGGCCTCCCCCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVARRTSH*GLPRSS
Trigger: GCTTGAACGGGGGAGGCCGCAGTGGGACGTTCTGCG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGCGGGCTCTTGGACTTaGCTTGCCGCACGAATCCCA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAAGSWT*LAARIP
Trigger: TGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAAGAGGCGAGCTGAGGTaGGGCAATAGGAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLARGELR*GNRNGW
Trigger: CCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACTCGGGTTCTGGGACTaGTTTCGGAGTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLALGFWD*FRSGSS
Trigger: GGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCCTACAGAGGCGAGCTaGGGTGGGGCAATAGGAACG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAPTEAS*GGAIGT
Trigger: CGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGCGGGCTCTTGGACTTaGCTTGCCGCACGAATCCCA +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAAGSWT*LAARIP
Trigger: TGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGGGACTGCACCAGGCTaGTGGTATCGCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAGTAPG*WYRWPL
Trigger: CAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGGCCAGCCCAGGAACTaGAATTGCTGCACCATCCGA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAGQPRN*NCCTIR
Trigger: TCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGCCCCGCAGGCCGGCTaGAGGGAGCGCTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTAPQAG*RERSRH
Trigger: GTGACGTGAGCGCTCCCTTCAGCCGGCCTGCGGGGC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGGCCAGCCAGTGAAGTaGAACTGTCTGATCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAGQPVK*NCLISR
Trigger: CCGAGAGATCAGACAGTTTCACTTCACTGGCTGGCC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGCCAAGCCCCCAAAGTaGCAACAGTTGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAAKPPK*QQLQKS
Trigger: GGACTTCTGCAACTGTTGGCACTTTGGGGGCTTGGC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGGGGCAACAGTGCGATaGTGCAGTCCTCTACTCGCA +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAGATVR*CSPLLA
Trigger: TGCGAGTAGAGGACTGCAGCATCGCACTGTTGCCCC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACCGATGGCACTGCACTaGAAGGTAGCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAPMALH*KVANWP
Trigger: TGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGTATCCACAGGTAGGTaGCTCCTACAGAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAVSTGR*LLQRRA
Trigger: AGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATAC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGCTCGTGGAATCGACTaGCTGCCGGTCATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAARGID*LPVIPA
Trigger: AGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGGAGCGCTTAGACACTaGTGTGTCCCTGTACATCGG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAGALRH*CVPVHR
Trigger: CCGATGTACAGGGACACACCAGTGTCTAAGCGCTCC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGCTCTAGGAAGCCGGTaGCAAGGAGTACGGGATTTG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAALGSR*QGVRDL
Trigger: CAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGCCGCGAGTAGTTTGTaGGCGCGGCCGGGCGGGACC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQAASSL*ARPGGT
Trigger: GGTCCCGCCCGGCCGCGCTCACAAACTACTCGCGGC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGTCCCCTCATGGTGCTaGGTGCGGGCCGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAVPSWC*VRAGPL
Trigger: GAGCGGCCCGGCCCGCACTCAGCACCATGAGGGGAC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGTGCGTGTCCATGAATaGGAAAGCCTCGTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAVRVHE*ESLVAV
Trigger: AACTGCGACGAGGCTTTCTCATTCATGGACACGCAC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCCTCATGGTGCTGAGTaGGGGCCGGGCCGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSPHGAE*GPGRSP
Trigger: CGGGGAGCGGCCCGGCCCGCACTCAGCACCATGAGG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATCATCTCCTGTCGGGTaGTGCTCATGGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLASSPVG*CSWSLS
Trigger: GGAAAGAGACCATGAGCAGCACCCGACAGGAGATGA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCCTCGTCGCAGTTTGTaGCCTGCTCAGCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAPRRSL*PAQHSS
Trigger: AGAGCTATGCTGAGCAGGGCACAAACTGCGACGAGG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATCCCATGGTGCAGACTaGCCTTCAAAGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLASHGAD*PSKKLS
Trigger: CGAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGCCCCACTCGGCGTCTaGCGCCGCTGGCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSAPLGV*RRWQRE
Trigger: CTCCCTCTGCCAGCGGCGCCAGACGCCGAGTGGGGC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAAAAGGCTGCGCAGCTTaGAGGCTGTCTGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAKGCAA*RLSAGN
Trigger: ATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGTCGGGTGCTGCTCATaGTCTCTTTCCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAVGCCS*SLSASW
Trigger: CCAAGAAGCGGAAAGAGACCATGAGCAGCACCCGAC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACAAATTCCACCTGGATaGGGCCGTGTCTGTGTACTC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAQIPPG*GRVCVL
Trigger: GAGTACACAGACACGGCCCCATCCAGGTGGAATTTG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAAGGCAGCAGCATTACTaGGATTGGGCAGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLARQQHY*DWAVQA
Trigger: TGCTTGCACTGCCCAATCCCAGTAATGCTGCTGCCT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGTCCCCTCATGGTGCTaGGTGCGGGCCGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGVPSWC*VRAGPL
Trigger: GAGCGGCCCGGCCCGCACTCAGCACCATGAGGGGAC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGGGCAGGTTTCAGCATaGCTGTCACGGTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAGQVSA*LSRYCQ
Trigger: CTGACAATACCGTGACAGTCATGCTGAAACCTGCCC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGTGCGTGTCCATGAATaGGAAAGCCTCGTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAVRVHE*ESLVAV
Trigger: AACTGCGACGAGGCTTTCTCATTCATGGACACGCAC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGCGCTGCTCGGCGGCTaGGGGAAAAGCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTALLGG*GKSEPG
Trigger: TCCTGGCTCGCTTTTCCCGCAGCCGCCGAGCAGCGC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCCTCATGGTGCTGAGTaGGGGCCGGGCCGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHPHGAE*GPGRSP
Trigger: CGGGGAGCGGCCCGGCCCGCACTCAGCACCATGAGG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACATCTCGCACATCAATaGCCTGTAACCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAHLAHQ*PVTRAC
Trigger: ACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACTTGCAGTGTTTTCGTaGCACACCATCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLALAVFS*HTILQK
Trigger: CTTCTGGAGGATGGTGTGGCACGAAAACACTGCAAG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCCATTGTACTCCTCTTaGCACTTGTCCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAPLYSS*HLSTWR
Trigger: TCGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTGCTCCCCGACTGACTaGCGGTGCCCCGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGCSPTD*RCPAGR
Trigger: CCGGCCTGCGGGGCACCGCCAGTCAGTCGGGGAGCA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATGCACTATGAGTTCTTaGCTTTCCTTCCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLACTMSS*LSFRPS
Trigger: AGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGGCTGCTGGTATCGCTaGCCATTGTGTGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAGCWYR*PLCGFH
Trigger: ATGAAACCCACACAATGGCCAGCGATACCAGCAGCC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGCAGTGCACCACCAGTaGGCCTGCACTGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVAVHHQ*ACTGRA
Trigger: AGCCCGCCCAGTGCAGGCCCACTGGTGGTGCACTGC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATACAGAGACCTAACTTaGGAAGCAGGCACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAYRDLT*EAGTEV
Trigger: CACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTTTCTGGCCAGTACTGTaGACACAACTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAFWPVL*TQLGRI
Trigger: GATCCTGCCCAGTTGTGTCCACAGTACTGGCCAGAA...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGAGACAAATTCCACCTaGATGGGGCCGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAETNST*MGPCLC
Trigger: ACACAGACACGGCCCCATCCAGGTGGAATTTGTCTC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAATCCATCTTGGGGTCTaGCGGCATTGTAAATGCGGA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAIHLGV*RHCKCG
Trigger: TCCGCATTTACAATGCCGCCAGACCCCAAGATGGAT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCTCGGTTCCGGTTGCTaGGCTCGCCGCCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQLGSGC*ARRLSP
Trigger: AGGGGAGAGGCGGCGAGCTCAGCAACCGGAACCGAG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR TCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCTCGGTTCCGGTTGCTaGGCTCGCCGCCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSLGSGC*ARRLSP
Trigger: AGGGGAGAGGCGGCGAGCTCAGCAACCGGAACCGAG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCCTTCACGTAGACATTaGGTAACCCCGGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAPSRRH*VTPEEN
Trigger: ATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGACATTGGTGTATGGTaGCAGGTTAGTGATCGTGTG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLADIGVW*QVSDRV
Trigger: CACACGATCACTAACCTGTCACCATACACCAATGTC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATGGCATAGAGGGTGCTaGTATTTTGGTGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAWHRGC*YFGGEL
Trigger: CAGTTCACCACCAAAATATCAGCACCCTCTATGCCA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACCGACTGACTGGCGGTaGCCCGCAGGCCGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRPTDWR*PAGRLK
Trigger: CTTCAGCCGGCCTGCGGGGCACCGCCAGTCAGTCGG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACCAGAGCCTGTCTCCTaGCACGGTCCTGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVPEPVS*HGPADG
Trigger: GCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACTTCAGTGCGAATCATaGAGCGGTACTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLALQCES*SGTFQH
Trigger: ATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTTACTGCTCCTCTGTTTaGACCATGTTCACCCTCCGT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAYCSSV*TMFTLR
Trigger: ACGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTA...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCGCAGAACGTCCCACTaGGGCCTCCCCCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTRRTSH*GLPRSS
Trigger: GCTTGAACGGGGGAGGCCGCAGTGGGACGTTCTGCG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACGCAGAACGTCCCACTaGGGCCTCCCCCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVRRTSH*GLPRSS
Trigger: GCTTGAACGGGGGAGGCCGCAGTGGGACGTTCTGCG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGGCGGCTTCGAGCCTaGCGCCGGACGGCGATGTCA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQRRLRA*RRTAMS
Trigger: TGACATCGCCGTCCGGCGCCAGGCTCGAAGCCGCCT...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGGAAGTGAGGAGTCCTaGTACATGGATGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAGSEES*YMDVLT
Trigger: TGTTAGGACATCCATGTACCAGGACTCCTCACTTCC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCTTGTATGGATTCAGTaGGAACAGCACCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVALVWIQ*EQHLGG
Trigger: ACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGAACTGGTTTGTTGCTaGAGGCCCAAAACCCTTAGC +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAELVCC*RPKTLS
Trigger: GCTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGCAGTGCACCACCAGTaGGCCTGCACTGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSAVHHQ*ACTGRA
Trigger: AGCCCGCCCAGTGCAGGCCCACTGGTGGTGCACTGC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTAAGGAGTACGGGATTTaGCAACTGTGGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAKEYGI*QLWLCV
Trigger: CACACACAGCCACAGTTGCCAAATCCCGTACTCCTT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGAGCCAGGAGATCGCTaGGGCTCCGGAGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCREPGDR*GSGGLR
Trigger: TCGCAGCCCTCCGGAGCCTCAGCGATCTCCTGGCTC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCAGCATGAAAGAACCTaGTGGCATCCATGGATCAGA +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAQHERT*WHPWIR
Trigger: TCTGATCCATGGATGCCATCAGGTTCTTTCATGCTG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGACATTGGTGTATGGTaGCAGGTTAGTGATCGTGTG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVADIGVW*QVSDRV
Trigger: CACACGATCACTAACCTGTCACCATACACCAATGTC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCATCTGTCTGCACTATaGGTTCTTGGCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAHLSAL*VLGFPS
Trigger: GGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACATGTTCACCCTCCGTaGCCGCAGCTCCCTGACGCA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVHVHPP*PQLPDA
Trigger: TGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTGCGCGCGGGGCTCTTaGTCCCCGACTGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCCARGS*SPTDWR
Trigger: CCGCCAGTCAGTCGGGGAGCAAGAGCCCCGCGCGCA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAAGCAGGTGGGCTCTCTaGCCCTCAGGTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVSRWAL*PSGLPE
Trigger: CTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGCAGGTGGGCTCTCTaGCCCTCAGGTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSRWAL*PSGLPE
Trigger: CTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCTTCAGTGCGAATCATaGAGCGGTACTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVALQCES*SGTFQH
Trigger: ATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACACCATGATGATACTTaGAGTGTTTTCGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAHHDDT*SVFVPH
Trigger: GTGTGGCACGAAAACACTGCAAGTATCATCATGGTG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACCCCCGTTCAAGCAGTaGACAACCGTGCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVPPFKQ*TTVRPS
Trigger: GGAAGGCCGCACGGTTGTGCACTGCTTGAACGGGGG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGGGGGCCGGGAGCTTTaGTTCCGAGGCAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRGGREL*FRGSEE
Trigger: CTCCTCGCTGCCTCGGAACCAAAGCTCCCGGCCCCC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGGAAGTGAGGAGTCCTaGTACATGGATGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAGSEES*YMDVLT
Trigger: TGTTAGGACATCCATGTACCAGGACTCCTCACTTCC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGGCAATAGGAACGGGTaGTTCTTTAACTACCAACTC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAGNRNG*FFNYQL
Trigger: GAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCAATTTTATAGCTCGTaGAATCGACTGGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAQFYSS*NRLAAG
Trigger: ACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAAGGTACTTCCTTGTATaGATTCAGTGGGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLARYFLV*IQWEQH
Trigger: GTGCTGTTCCCACTGAATCCATACAAGGAAGTACCT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTATTTTGGTGGTGAACTaGTTTGTTGCTGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAILVVN*FVAGGP
Trigger: TGGGCCTCCAGCAACAAACCAGTTCACCACCAAAAT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCTCGGGTTCTGGGACTaGTTTCGGAGTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFFILFSSFLAESHGADCLGFWD*FRSGSS
Trigger: GGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAG...GCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCAGTGCACCACCAGTaGGCCTGCACTGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRAVHHQ*ACTGRA
Trigger: AGCCCGCCCAGTGCAGGCCCACTGGTGGTGCACTGC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATACTGTGGACACAACTaGGCAGGATCCACATCATTT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAYCGHN*AGSTSF
Trigger: AAATGATGTGGATCCTGCCCAGTTGTGTCCACAGTA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGTGTACTCCGTTTTCTaGCCAGTACTGTGGACACAA +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAVYSVF*PVLWTQ
Trigger: TTGTGTCCACAGTACTGGCCAGAAAACGGAGTACAC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCACATGGAAAAGCTCTaGGTCCGTGAATCTGATCGT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAHMEKL*VRESDR
Trigger: ACGATCAGATTCACGGACCCAGAGCTTTTCCATGTG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATCGCTGGCCATTGTGTaGGTTTCATCATTTATTGGC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLASLAIV*VSSFIG
Trigger: GCCAATAAATGATGAAACCCACACAATGGCCAGCGA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAAACAGTAGTGGACAGTaGGATTATAACTGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLANSSGQ*DYNCGN
Trigger: GTTGCCACAGTTATAATCTCACTGTCCACTACTGTT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATTAGTGATCGTGTGTTaGGGGTGTGAGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLALVIVC*GCEFSV
Trigger: TACAGAAAACTCACACCCTCAACACACGATCACTAA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGCGGGCTCTTGGACTTaGCTTGCCGCACGAATCCCA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVAGSWT*LAARIP
Trigger: TGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACATGTTCACCCTCCGTaGCCGCAGCTCCCTGACGCA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQHVHPP*PQLPDA
Trigger: TGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCATGTTCACCCTCCGTaGCCGCAGCTCCCTGACGCA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQHVHPP*PQLPDA
Trigger: TGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACCAGAGCCTGTCTCCTaGCACGGTCCTGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRPEPVS*HGPADG
Trigger: GCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCAGCTCCCACTGGCCGTaGAGTACTCCACCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSSSHWP*STPPLG
Trigger: CCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGCTCCCACTGGCCGTaGAGTACTCCACCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQSSHWP*STPPLG
Trigger: CCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGGGACTGCACCAGGCTaGTGGTATCGCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTGTAPG*WYRWPL
Trigger: CAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGTGCTGAAGGAGGTCTaGCACCCGGATGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGVLKEV*HPDGGV
Trigger: CACCCCGCCATCCGGGTGGCAGACCTCCTTCAGCAC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGTGCTGAAGGAGGTCTaGCACCCGGATGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRVLKEV*HPDGGV
Trigger: CACCCCGCCATCCGGGTGGCAGACCTCCTTCAGCAC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGCACCAGCACTGCAGTaGACCACCAGTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQAPALQ*TTSGPA
Trigger: TGCAGGCCCACTGGTGGTGCACTGCAGTGCTGGTGC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGTGTTTGGCAAAGGATaGTGGGTGACTATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAVFGKG*WVTIKA
Trigger: AGCTTTTATAGTCACCCAGCATCCTTTGCCAAACAC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCCCCCGTTCAAGCAGTaGACAACCGTGCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSPPFKQ*TTVRPS
Trigger: GGAAGGCCGCACGGTTGTGCACTGCTTGAACGGGGG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCGCAGAACGTCCCACTaGGGCCTCCCCCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGRRTSH*GLPRSS
Trigger: GCTTGAACGGGGGAGGCCGCAGTGGGACGTTCTGCG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATCATTTTCTTTAAGTTaGGGTAAGAGCAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLASFSLS*GKSRWA
Trigger: AGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGAGGCGAGCTGAGGTaGGGCAATAGGAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTRGELR*GNRNGW
Trigger: CCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTAGGTACTTCCTTGTATaGATTCAGTGGGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVARYFLV*IQWEQH
Trigger: GTGCTGTTCCCACTGAATCCATACAAGGAAGTACCT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACTCGGGTTCTGGGACTaGTTTCGGAGTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVLGFWD*FRSGSS
Trigger: GGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTTACTGTGGACACAACTaGGCAGGATCCACATCATTT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAYCGHN*AGSTSF
Trigger: AAATGATGTGGATCCTGCCCAGTTGTGTCCACAGTA...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATCATCACCTTCAGATTaGCTATATCCACATGTGCTA +
Preference number: 4 (lower is better)
Translates to: PAVYAALGSRWQGVRDLASSPSD*LYPHVL
Trigger: TAGCACATGTGGATATAGTCAATCTGAAGGTGATGA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCAACTCTGCATAGTTTaGTATTCCAACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAQLCIV*YSNTSF
Trigger: GAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCCTACAGAGGCGAGCTaGGGTGGGGCAATAGGAACG +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSPTEAS*GGAIGT
Trigger: CGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCCTACAGAGGCGAGCTaGGGTGGGGCAATAGGAACG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAPTEAS*GGAIGT
Trigger: CGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCGATTGTGCGTGTCCATaGATGAGAAAGCCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: VLHSVLIFLSRVPWCRLPDCACP*MRKPRR
Trigger: GCGACGAGGCTTTCTCATTCATGGACACGCACAATC...GGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGCGGGCTCTTGGACTTaGCTTGCCGCACGAATCCCA +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAAGSWT*LAARIP
Trigger: TGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGACTGTGGAAGAGGCTaGGCCGCCGCCAGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQDCGRG*AAARSL
Trigger: CAAACTTCTGGCGGCGGCGCAGCCTCTTCCACAGTC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATAGCAGGTGGGCTCTCTaGCCCTCAGGTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSRWAL*PSGLPE
Trigger: CTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCTCCTGCCACGGTCCTaGCGATGGCACTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGLLPRS*RWHCTG
Trigger: TCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCTCCTGCCACGGTCCTaGCGATGGCACTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHLLPRS*RWHCTG
Trigger: TCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATAGCTCCCACTGGCCGTaGAGTACTCCACCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSSHWP*STPPLG
Trigger: CCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGTGGAATCGACTGGCTaGCGGTCATTCCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTVESTG*RSFQLP
Trigger: TGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCAC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGTGGAATCGACTGGCTaGCGGTCATTCCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVVESTG*RSFQLP
Trigger: TGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCAC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTAGGTCTTCATCTGTCTaGACTATGAGTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVARSSSV*TMSSWL
Trigger: AAGCCAAGAACTCATAGTGCAGACAGATGAAGACCT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTCCTCGTCGCAGTTTGTaGCCTGCTCAGCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: FFILFSSFLAESHGADCPPRRSL*PAQHSS
Trigger: AGAGCTATGCTGAGCAGGGCACAAACTGCGACGAGG...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGGGACTGCACCAGGCTaGTGGTATCGCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSGTAPG*WYRWPL
Trigger: CAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCAGCCGAGTCCCATGGTaGAGACTGCCCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VLHSVLIFLSRVPWCRLPSRVPW*RLPFKE
Trigger: TTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCT...GGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGCACCAGCACTGCAGTaGACCACCAGTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGAPALQ*TTSGPA
Trigger: TGCAGGCCCACTGGTGGTGCACTGCAGTGCTGGTGC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGCAACAGTGCGATGCTaGAGTCCTCTACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTATVRC*SPLLAA
Trigger: CGCTGCGAGTAGAGGACTGCAGCATCGCACTGTTGC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGCAACAGTGCGATGCTaGAGTCCTCTACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVATVRC*SPLLAA
Trigger: CGCTGCGAGTAGAGGACTGCAGCATCGCACTGTTGC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAGCAGTGCACAACCGTaGGGCCTTCCCCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWASSAQP*GLPRHC
Trigger: ACAATGGCGGGGAAGGCCGCACGGTTGTGCACTGCT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCCCCCGTTCAAGCAGTaGACAACCGTGCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHPPFKQ*TTVRPS
Trigger: GGAAGGCCGCACGGTTGTGCACTGCTTGAACGGGGG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGAGGCGAGCTGAGGTaGGGCAATAGGAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQRGELR*GNRNGW
Trigger: CCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCT...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACATTCCAGCTCCCACTaGCCGTGCAGTACTCCACCT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVHSSSH*PCSTPP
Trigger: AGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCAAAGGCTGCGCAGCTTaGAGGCTGTCTGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: VLHSVLIFLSRVPWCRLPKGCAA*RLSAGN
Trigger: ATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTT...GGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCTCGGGTTCTGGGACTaGTTTCGGAGTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWALGFWD*FRSGSS
Trigger: GGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTGTCGGGTGCTGCTCATaGTCTCTTTCCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FFILFSSFLAESHGADCPVGCCS*SLSASW
Trigger: CCAAGAAGCGGAAAGAGACCATGAGCAGCACCCGAC...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGGCCAGCCCAGGAACTaGAATTGCTGCACCATCCGA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVGQPRN*NCCTIR
Trigger: TCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAAAGAGGCAGCCACCTaGGAACGTCTCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLKEAAT*ERLARR
Trigger: GCGGCGGGCGAGACGTTCTCAGGTGGCTGCCTCTTT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCCTACAGAGGCGAGCTaGGGTGGGGCAATAGGAACG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHPTEAS*GGAIGT
Trigger: CGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTACGGTATTGTCAGTTTaGTTCAAAGGTGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVATVLSV*FKGVSS
Trigger: ACTTGAGACACCTTTGAATCAAACTGACAATACCGT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTGTGCGTGTCCATGAATaGGAAAGCCTCGTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: FFILFSSFLAESHGADCPVRVHE*ESLVAV
Trigger: AACTGCGACGAGGCTTTCTCATTCATGGACACGCAC...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGGCCAGCCAGTGAAGTaGAACTGTCTGATCTCTCGG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTGQPVK*NCLISR
Trigger: CCGAGAGATCAGACAGTTTCACTTCACTGGCTGGCC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGGCCAGCCAGTGAAGTaGAACTGTCTGATCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVGQPVK*NCLISR
Trigger: CCGAGAGATCAGACAGTTTCACTTCACTGGCTGGCC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATGTCCACCTGGCGAATaGGCTTCAAGAAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVCPPGE*ASRRSA
Trigger: AGCGCTCCTTCTTGAAGCTCATTCGCCAGGTGGACA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTCTCACATACGATGCTaGTGGCGCAGAACGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSHIRC*WRRTSH
Trigger: GTGGGACGTTCTGCGCCATCAGCATCGTATGTGAGA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGCTCCGGCAGGAGCCTaGAGAGGAGACACGCACAGG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLAPAGA*RGDTHR
Trigger: CCTGTGCGTGTCTCCTCTTCAGGCTCCTGCCGGAGC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400053.8
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCCAGAGCCTGTCTCCTaGCACGGTCCTGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLPEPVS*HGPADG
Trigger: GCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCATAGACACTGACAGGTaGTCCTCTGCTGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTIDTDR*SSAVGR
Trigger: CCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTAT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGTCTCCTGTCGGGTGCTaGTCATGGTCTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLSPVGC*SWSLSA
Trigger: AGCGGAAAGAGACCATGAGCAGCACCCGACAGGAGA...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR GCA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTTCATCTCCTGTCGGGTaGTGCTCATGGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FFILFSSFLAESHGADCPSSPVG*CSWSLS
Trigger: GGAAAGAGACCATGAGCAGCACCCGACAGGAGATGA...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGGGACTGCACCAGGCTaGTGGTATCGCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHGTAPG*WYRWPL
Trigger: CAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATAGCAGTGCACAACCGTaGGGCCTTCCCCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSSAQP*GLPRHC
Trigger: ACAATGGCGGGGAAGGCCGCACGGTTGTGCACTGCT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTAGCAGTGCACAACCGTaGGGCCTTCCCCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGSSAQP*GLPRHC
Trigger: ACAATGGCGGGGAAGGCCGCACGGTTGTGCACTGCT...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATCCACGGTTCTCTGGTaGCGGAGCATCTCACATACG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVSTVLW*RSISHT
Trigger: CGTATGTGAGATGCTCCGGCACCAGAGAACCGTGGA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTATGAAAGGGATTGTTTaGAGAGCTGTTTACACCATC +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAMKGIV*RAVYTI
Trigger: GATGGTGTAAACAGCTCTGCAAACAATCCCTTTCAT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAACCAGCTGTCTACGCTaGTCTAGGAAGCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQTSCLR*SRKPVA
Trigger: TGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGGT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCACCAGCTGTCTACGCTaGTCTAGGAAGCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSTSCLR*SRKPVA
Trigger: TGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGGT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTACCAGCTGTCTACGCTaGTCTAGGAAGCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWATSCLR*SRKPVA
Trigger: TGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGGT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAGAGGCGAGCTGAGGTaGGGCAATAGGAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRRGELR*GNRNGW
Trigger: CCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGTATCCACAGGTAGGTaGCTCCTACAGAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTVSTGR*LLQRRA
Trigger: AGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATAC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCATTCCAGCTCCCACTaGCCGTGCAGTACTCCACCT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSHSSSH*PCSTPP
Trigger: AGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGCTCGTGGAATCGACTaGCTGCCGGTCATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQARGID*LPVIPA
Trigger: AGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATCTTGTCCTGAGAGCTaGACCAGGAGAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQSCPES*TRRASA
Trigger: GGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTCTTGTCCTGAGAGCTaGACCAGGAGAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQSCPES*TRRASA
Trigger: GGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGGGACTGGTTTCGGAGTaGCAGCTCCTTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLGLVSE*QLLLWP
Trigger: TGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCC...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGGACTGGTTTCGGAGTaGCAGCTCCTTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTGLVSE*QLLLWP
Trigger: TGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCTCGGGTTCTGGGACTaGTTTCGGAGTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHLGFWD*FRSGSS
Trigger: GGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACTGTTTCTCGGGTTCTaGGACTGGTTTCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVLFLGF*DWFRSG
Trigger: GCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCTGTTTCTCGGGTTCTaGGACTGGTTTCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLLFLGF*DWFRSG
Trigger: GCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAG...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAACTGCACCAGGCTGCTaGTATCGCTGGCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVTAPGC*YRWPLC
Trigger: ACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTCTTAGCCGAGTCCCATaGTGCAGACTGCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FFILFSSFLAESHGADCPLSRVP*CRLPFK
Trigger: TTTGAAGGGCAGTCTGCACCATGGGACTCGGCTAAG...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCACCGGTTTTTCTCATaGTTCCGGGGCAACAGTGCG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTHRFFS*FRGNSA
Trigger: CGCACTGTTGCCCCGGAACCATGAGAAAAACCGGTG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGGCCAGCCCAGGAACTaGAATTGCTGCACCATCCGA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQGQPRN*NCCTIR
Trigger: TCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGGAGCGCTTAGACACTaGTGTGTCCCTGTACATCGG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTGALRH*CVPVHR
Trigger: CCGATGTACAGGGACACACCAGTGTCTAAGCGCTCC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTAACGTCTTGGCTTTGTaGTATGAAAGGGATTGTTTG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVANVLAL*YERDCL
Trigger: CAAACAATCCCTTTCATACCACAAAGCCAAGACGTT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGCTCTAGGAAGCCGGTaGCAAGGAGTACGGGATTTG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVALGSR*QGVRDL
Trigger: CAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTTACAATATAAACACATaGAAAAGCTCTGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVAYNINT*KSSGSV
Trigger: CACGGACCCAGAGCTTTTCCATGTGTTTATATTGTA...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGGGCAGGTTTCAGCATaGCTGTCACGGTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVGQVSA*LSRYCQ
Trigger: CTGACAATACCGTGACAGTCATGCTGAAACCTGCCC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGTGCGTGTCCATGAATaGGAAAGCCTCGTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTVRVHE*ESLVAV
Trigger: AACTGCGACGAGGCTTTCTCATTCATGGACACGCAC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGATTGTGCGTGTCCATaGATGAGAAAGCCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTDCACP*MRKPRR
Trigger: GCGACGAGGCTTTCTCATTCATGGACACGCACAATC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGGCCAGCCAGTGAAGTaGAACTGTCTGATCTCTCGG +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQGQPVK*NCLISR
Trigger: CCGAGAGATCAGACAGTTTCACTTCACTGGCTGGCC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGTGACCGCAGCTCCCTaGCGCAGTTGTAGATGTCTA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQVTAAP*RSCRCL
Trigger: TAGACATCTACAACTGCGTCAGGGAGCTGCGGTCAC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGTGACCGCAGCTCCCTaGCGCAGTTGTAGATGTCTA +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSVTAAP*RSCRCL
Trigger: TAGACATCTACAACTGCGTCAGGGAGCTGCGGTCAC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCATGTTCACCCTCCGTaGCCGCAGCTCCCTGACGCA +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLHVHPP*PQLPDA
Trigger: TGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATCTCACATACGATGCTaGTGGCGCAGAACGTCCCAC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQSHIRC*WRRTSH
Trigger: GTGGGACGTTCTGCGCCATCAGCATCGTATGTGAGA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAGCTCCCACTGGCCGTaGAGTACTCCACCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLSSHWP*STPPLG
Trigger: CCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTATAGACACTGACAGGTaGTCCTCTGCTGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAIDTDR*SSAVGR
Trigger: CCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTAT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTCTCCTGTCGGGTGCTaGTCATGGTCTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQSPVGC*SWSLSA
Trigger: AGCGGAAAGAGACCATGAGCAGCACCCGACAGGAGA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTCTCCTGTCGGGTGCTaGTCATGGTCTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSSPVGC*SWSLSA
Trigger: AGCGGAAAGAGACCATGAGCAGCACCCGACAGGAGA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATCATCTCCTGTCGGGTaGTGCTCATGGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVSSPVG*CSWSLS
Trigger: GGAAAGAGACCATGAGCAGCACCCGACAGGAGATGA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACCTCGTCGCAGTTTGTaGCCTGCTCAGCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQPRRSL*PAQHSS
Trigger: AGAGCTATGCTGAGCAGGGCACAAACTGCGACGAGG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTCCCATGGTGCAGACTaGCCTTCAAAGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSHGAD*PSKKLS
Trigger: CGAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGCCGAGTCCCATGGTaGAGACTGCCCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSRVPW*RLPFKE
Trigger: TTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAAGCCGAGTCCCATGGTaGAGACTGCCCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVSRVPW*RLPFKE
Trigger: TTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACTCTTGGACTTGACTTaGCGCACGAATCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQLLDLT*RTNPSR
Trigger: CCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGCACCAGCACTGCAGTaGACCACCAGTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLAPALQ*TTSGPA
Trigger: TGCAGGCCCACTGGTGGTGCACTGCAGTGCTGGTGC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGCAACAGTGCGATGCTaGAGTCCTCTACTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGATVRC*SPLLAA
Trigger: CGCTGCGAGTAGAGGACTGCAGCATCGCACTGTTGC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGGGGCAACAGTGCGATaGTGCAGTCCTCTACTCGCA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGGATVR*CSPLLA
Trigger: TGCGAGTAGAGGACTGCAGCATCGCACTGTTGCCCC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGGGGCAACAGTGCGATaGTGCAGTCCTCTACTCGCA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHGATVR*CSPLLA
Trigger: TGCGAGTAGAGGACTGCAGCATCGCACTGTTGCCCC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACCATTGTACTCCTCTTaGCACTTGTCCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVPLYSS*HLSTWR
Trigger: TCGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACCGATGGCACTGCACTaGAAGGTAGCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQPMALH*KVANWP
Trigger: TGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGTATCCACAGGTAGGTaGCTCCTACAGAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQVSTGR*LLQRRA
Trigger: AGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATAC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGTATCCACAGGTAGGTaGCTCCTACAGAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSVSTGR*LLQRRA
Trigger: AGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATAC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCATTCCAGCTCCCACTaGCCGTGCAGTACTCCACCT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGHSSSH*PCSTPP
Trigger: AGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGCTCGTGGAATCGACTaGCTGCCGGTCATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHARGID*LPVIPA
Trigger: AGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTCTTGTCCTGAGAGCTaGACCAGGAGAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSCPES*TRRASA
Trigger: GGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGGTGCTCCTCTGCTGTaGGCAGGTTTCAGCATGACT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQGAPLL*AGFSMT
Trigger: AGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAAAGGCTGCGCAGCTTaGAGGCTGTCTGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTKGCAA*RLSAGN
Trigger: ATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGGACTGGTTTCGGAGTaGCAGCTCCTTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQGLVSE*QLLLWP
Trigger: TGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACTGTTTCTCGGGTTCTaGGACTGGTTTCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQLFLGF*DWFRSG
Trigger: GCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGTCGGGTGCTGCTCATaGTCTCTTTCCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQVGCCS*SLSASW
Trigger: CCAAGAAGCGGAAAGAGACCATGAGCAGCACCCGAC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGTCGGGTGCTGCTCATaGTCTCTTTCCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAVGCCS*SLSASW
Trigger: CCAAGAAGCGGAAAGAGACCATGAGCAGCACCCGAC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCACTGCACCAGGCTGCTaGTATCGCTGGCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSTAPGC*YRWPLC
Trigger: ACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAACTGCACCAGGCTGCTaGTATCGCTGGCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQTAPGC*YRWPLC
Trigger: ACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGGAGCGCTTAGACACTaGTGTGTCCCTGTACATCGG +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSGALRH*CVPVHR
Trigger: CCGATGTACAGGGACACACCAGTGTCTAAGCGCTCC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGGAGCGCTTAGACACTaGTGTGTCCCTGTACATCGG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAGALRH*CVPVHR
Trigger: CCGATGTACAGGGACACACCAGTGTCTAAGCGCTCC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCACATCCACGGTTCTCTaGTGCCGGAGCATCTCACAT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTTSTVL*CRSISH
Trigger: ATGTGAGATGCTCCGGCACCAGAGAACCGTGGATGT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGGCAGCAGCATTACTaGGATTGGGCAGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTRQQHY*DWAVQA
Trigger: TGCTTGCACTGCCCAATCCCAGTAATGCTGCTGCCT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAAGGCAGCAGCATTACTaGGATTGGGCAGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVRQQHY*DWAVQA
Trigger: TGCTTGCACTGCCCAATCCCAGTAATGCTGCTGCCT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGGGAGCTGGTCACCTTaGTTTCCTTCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQGSWSP*FPSEEH
Trigger: ATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGGGAGCTGGTCACCTTaGTTTCCTTCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQGSWSP*FPSEEH
Trigger: ATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACGTGTGTTGAGGGTGTaGGTTTTCTGTATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVRVLRV*VFCIPA
Trigger: AGCTGGGATACAGAAAACTCACACCCTCAACACACG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGGGCAGGTTTCAGCATaGCTGTCACGGTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQGQVSA*LSRYCQ
Trigger: CTGACAATACCGTGACAGTCATGCTGAAACCTGCCC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGATTGTGCGTGTCCATaGATGAGAAAGCCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWADCACP*MRKPRR
Trigger: GCGACGAGGCTTTCTCATTCATGGACACGCACAATC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTTGTGAAGGACGATGGTaGAGACACAGATCTCCCATT +
Preference number: 4 (lower is better)
Translates to: FFILFSSFLAESHGADCPCEGRW*RHRSPI
Trigger: AATGGGAGATCTGTGTCTTCACCATCGTCCTTCACA...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACACACTTCATCTGTGTaGTGTGCTGAAGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVHTSSV*CAEGGL
Trigger: CAGACCTCCTTCAGCACATCACACAGATGAAGTGTG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGTGACCGCAGCTCCCTaGCGCAGTTGTAGATGTCTA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGVTAAP*RSCRCL
Trigger: TAGACATCTACAACTGCGTCAGGGAGCTGCGGTCAC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTGTCCACCTGGCGAATaGGCTTCAAGAAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGCPPGE*ASRRSA
Trigger: AGCGCTCCTTCTTGAAGCTCATTCGCCAGGTGGACA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTCTCACATACGATGCTaGTGGCGCAGAACGTCCCAC +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGSHIRC*WRRTSH
Trigger: GTGGGACGTTCTGCGCCATCAGCATCGTATGTGAGA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATCTCACATACGATGCTaGTGGCGCAGAACGTCCCAC +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRSHIRC*WRRTSH
Trigger: GTGGGACGTTCTGCGCCATCAGCATCGTATGTGAGA...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGTGTCTTCACAGCGTaGAAGACATCCACGGTTCTC +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSVFTA*KTSTVL
Trigger: GAGAACCGTGGATGTCTTTCACGCTGTGAAGACACT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAAGTGTCTTCACAGCGTaGAAGACATCCACGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVSVFTA*KTSTVL
Trigger: GAGAACCGTGGATGTCTTTCACGCTGTGAAGACACT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTAATAGTGAAAATCGATaGAGTGGGTGTCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: YAALGSRWQGVRDLATVANSENR*SGCHFL
Trigger: AAGAAAATGACACCCACTGCATCGATTTTCACTATT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAACACCTCCTTCAGTaGGAATCATGCAGCGGTACT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVQHLLQ*ESCSGT
Trigger: AGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAATAGACACTGACAGGTaGTCCTCTGCTGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRIDTDR*SSAVGR
Trigger: CCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTAT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCAATTGTAAAAGGCTaGGCAGCTTGGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLPIVKG*AAWRLS
Trigger: AGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGG...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATCTCCTGTCGGGTGCTaGTCATGGTCTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRSPVGC*SWSLSA
Trigger: AGCGGAAAGAGACCATGAGCAGCACCCGACAGGAGA...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTCATCTCCTGTCGGGTaGTGCTCATGGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSSSPVG*CSWSLS
Trigger: GGAAAGAGACCATGAGCAGCACCCGACAGGAGATGA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACCTCGTCGCAGTTTGTaGCCTGCTCAGCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRPRRSL*PAQHSS
Trigger: AGAGCTATGCTGAGCAGGGCACAAACTGCGACGAGG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCCTCGTCGCAGTTTGTaGCCTGCTCAGCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHPRRSL*PAQHSS
Trigger: AGAGCTATGCTGAGCAGGGCACAAACTGCGACGAGG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATCCCATGGTGCAGACTaGCCTTCAAAGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQSHGAD*PSKKLS
Trigger: CGAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAGCCGAGTCCCATGGTaGAGACTGCCCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWASRVPW*RLPFKE
Trigger: TTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACTTGCAGTGTTTTCGTaGCACACCATCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVLAVFS*HTILQK
Trigger: CTTCTGGAGGATGGTGTGGCACGAAAACACTGCAAG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCTCTTGGACTTGACTTaGCGCACGAATCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGLLDLT*RTNPSR
Trigger: CCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACCCAGGAACTGGAATTaGTGCACCATCCGATATCCA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVPRNWN*CTIRYP
Trigger: TGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCCCAGGAACTGGAATTaGTGCACCATCCGATATCCA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTPRNWN*CTIRYP
Trigger: TGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAGCAGTGCACAACCGTaGGGCCTTCCCCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLSSAQP*GLPRHC
Trigger: ACAATGGCGGGGAAGGCCGCACGGTTGTGCACTGCT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATCCACGGTTCTCTGGTaGCGGAGCATCTCACATACG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRSTVLW*RSISHT
Trigger: CGTATGTGAGATGCTCCGGCACCAGAGAACCGTGGA...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCCGATGGCACTGCACTaGAAGGTAGCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGPMALH*KVANWP
Trigger: TGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTTCCTTCCGGCCCTCTaGGTTCATGAGGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTFLPAL*VHEDQF
Trigger: AAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAGTGGGAACAGCACCTaGGAGGTCTTCATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWASGNST*EVFICL
Trigger: CAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGAACTGGTTTGTTGCTaGAGGCCCAAAACCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVELVCC*RPKTLS
Trigger: GCTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGGTGCTCCTCTGCTGTaGGCAGGTTTCAGCATGACT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRGAPLL*AGFSMT
Trigger: AGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAAAGGCTGCGCAGCTTaGAGGCTGTCTGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQKGCAA*RLSAGN
Trigger: ATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCGGACACAGTCTATTTTaGTTTCCCCATTGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: VLHSVLIFLSRVPWCRLPGHSLF*FPHWLY
Trigger: GTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCC...GGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGTGGCAGCTCCTTTTGTaGCCACTTGGACACAGTCTA +
Preference number: 4 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLWQLLL*PLGHSL
Trigger: TAGACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCA...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGGACTGGTTTCGGAGTaGCAGCTCCTTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRGLVSE*QLLLWP
Trigger: TGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGTCGGGTGCTGCTCATaGTCTCTTTCCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHVGCCS*SLSASW
Trigger: CCAAGAAGCGGAAAGAGACCATGAGCAGCACCCGAC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGGCTGCTGGTATCGCTaGCCATTGTGTGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAGCWYR*PLCGFH
Trigger: ATGAAACCCACACAATGGCCAGCGATACCAGCAGCC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCTTAGCCGAGTCCCATaGTGCAGACTGCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQLSRVP*CRLPFK
Trigger: TTTGAAGGGCAGTCTGCACCATGGGACTCGGCTAAG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACACCGGTTTTTCTCATaGTTCCGGGGCAACAGTGCG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRHRFFS*FRGNSA
Trigger: CGCACTGTTGCCCCGGAACCATGAGAAAAACCGGTG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTTCTGGCCAGTACTGTaGACACAACTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSFWPVL*TQLGRI
Trigger: GATCCTGCCCAGTTGTGTCCACAGTACTGGCCAGAA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCAAATTCCACCTGGATaGGGCCGTGTCTGTGTACTC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAQIPPG*GRVCVL
Trigger: GAGTACACAGACACGGCCCCATCCAGGTGGAATTTG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCAAATTCCACCTGGATaGGGCCGTGTCTGTGTACTC +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSQIPPG*GRVCVL
Trigger: GAGTACACAGACACGGCCCCATCCAGGTGGAATTTG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGAGACAAATTCCACCTaGATGGGGCCGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSETNST*MGPCLC
Trigger: ACACAGACACGGCCCCATCCAGGTGGAATTTGTCTC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGAGACAAATTCCACCTaGATGGGGCCGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQETNST*MGPCLC
Trigger: ACACAGACACGGCCCCATCCAGGTGGAATTTGTCTC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGGCCAGCCCAGGAACTaGAATTGCTGCACCATCCGA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCGQPRN*NCCTIR
Trigger: TCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATGCCACTTGTCCACCTaGCGAATGAGCTTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVCHLST*RMSFKK
Trigger: CTTCTTGAAGCTCATTCGCCAGGTGGACAAGTGGCA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTGCCACTTGTCCACCTaGCGAATGAGCTTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTCHLST*RMSFKK
Trigger: CTTCTTGAAGCTCATTCGCCAGGTGGACAAGTGGCA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAACATCCACGGTTCTCTaGTGCCGGAGCATCTCACAT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQTSTVL*CRSISH
Trigger: ATGTGAGATGCTCCGGCACCAGAGAACCGTGGATGT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCAGGCAGCAGCATTACTaGGATTGGGCAGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSRQQHY*DWAVQA
Trigger: TGCTTGCACTGCCCAATCCCAGTAATGCTGCTGCCT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTCTAGGAAGCCGGTaGCAAGGAGTACGGGATTTG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRALGSR*QGVRDL
Trigger: CAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCCTTCACGTAGACATTaGGTAACCCCGGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAPSRRH*VTPEEN
Trigger: ATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGGGAGCTGGTCACCTTaGTTTCCTTCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRGSWSP*FPSEEH
Trigger: ATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTACTTTGTTCTTGTCCTaGGAGCTGGACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGTLFLS*ELDQES
Trigger: GCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGT...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAACTTTGTTCTTGTCCTaGGAGCTGGACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRTLFLS*ELDQES
Trigger: GCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATACTTTGTTCTTGTCCTaGGAGCTGGACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHTLFLS*ELDQES
Trigger: GCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGACATTGGTGTATGGTaGCAGGTTAGTGATCGTGTG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVDIGVW*QVSDRV
Trigger: CACACGATCACTAACCTGTCACCATACACCAATGTC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTGGCATAGAGGGTGCTaGTATTTTGGTGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTWHRGC*YFGGEL
Trigger: CAGTTCACCACCAAAATATCAGCACCCTCTATGCCA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGTGCGTGTCCATGAATaGGAAAGCCTCGTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRVRVHE*ESLVAV
Trigger: AACTGCGACGAGGCTTTCTCATTCATGGACACGCAC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGATTGTGCGTGTCCATaGATGAGAAAGCCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHDCACP*MRKPRR
Trigger: GCGACGAGGCTTTCTCATTCATGGACACGCACAATC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCACACTTCATCTGTGTaGTGTGCTGAAGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQHTSSV*CAEGGL
Trigger: CAGACCTCCTTCAGCACATCACACAGATGAAGTGTG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCACACTTCATCTGTGTaGTGTGCTGAAGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAHTSSV*CAEGGL
Trigger: CAGACCTCCTTCAGCACATCACACAGATGAAGTGTG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACATCTCGCACATCAATaGCCTGTAACCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQHLAHQ*PVTRAC
Trigger: ACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCTTCAGTGCGAATCATaGAGCGGTACTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTLQCES*SGTFQH
Trigger: ATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCAACACCTCCTTCAGTaGGAATCATGCAGCGGTACT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAQHLLQ*ESCSGT
Trigger: AGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCAACACCTCCTTCAGTaGGAATCATGCAGCGGTACT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQQHLLQ*ESCSGT
Trigger: AGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGGTGAACTGGTTTGTTaGTGGAGGCCCAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSGELVC*WRPKTL
Trigger: AAGGGTTTTGGGCCTCCAGCAACAAACCAGTTCACC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGGTGAACTGGTTTGTTaGTGGAGGCCCAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQGELVC*WRPKTL
Trigger: AAGGGTTTTGGGCCTCCAGCAACAAACCAGTTCACC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCCAATTGTAAAAGGCTaGGCAGCTTGGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAPIVKG*AAWRLS
Trigger: AGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTCTCCTGTCGGGTGCTaGTCATGGTCTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSPVGC*SWSLSA
Trigger: AGCGGAAAGAGACCATGAGCAGCACCCGACAGGAGA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTCCCATGGTGCAGACTaGCCTTCAAAGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGSHGAD*PSKKLS
Trigger: CGAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCTCTTGGACTTGACTTaGCGCACGAATCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCLLDLT*RTNPSR
Trigger: CCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGGGGCAGGATGTCCATaGACCGGTTTTTCTCATGGT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRGAGCP*TGFSHG
Trigger: ACCATGAGAAAAACCGGTGCATGGACATCCTGCCCC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGGGGCAGGATGTCCATaGACCGGTTTTTCTCATGGT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHGAGCP*TGFSHG
Trigger: ACCATGAGAAAAACCGGTGCATGGACATCCTGCCCC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCCCAGGAACTGGAATTaGTGCACCATCCGATATCCA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQPRNWN*CTIRYP
Trigger: TGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCCATTGTACTCCTCTTaGCACTTGTCCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHPLYSS*HLSTWR
Trigger: TCGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTCCACGGTTCTCTGGTaGCGGAGCATCTCACATACG +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSTVLW*RSISHT
Trigger: CGTATGTGAGATGCTCCGGCACCAGAGAACCGTGGA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTACCAGCTGTCTACGCTaGTCTAGGAAGCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLTSCLR*SRKPVA
Trigger: TGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGGT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGATAGGATTCCCCAGTaGCCCGTTATTGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWADRIPQ*PVIDLH
Trigger: GTGAAGGTCAATAACGGGCCACTGGGGAATCCTATC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGATAGGATTCCCCAGTaGCCCGTTATTGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQDRIPQ*PVIDLH
Trigger: GTGAAGGTCAATAACGGGCCACTGGGGAATCCTATC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCATTCCAGCTCCCACTaGCCGTGCAGTACTCCACCT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLHSSSH*PCSTPP
Trigger: AGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAATTTTATAGCTCGTaGAATCGACTGGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVQFYSS*NRLAAG
Trigger: ACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATTCTTGGGCCTCGCATaGGATCAGCACACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQFLGLA*DQHTLF
Trigger: GAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTTCCTTCCGGCCCTCTaGGTTCATGAGGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSFLPAL*VHEDQF
Trigger: AAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATTCCTTCCGGCCCTCTaGGTTCATGAGGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQFLPAL*VHEDQF
Trigger: AAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTGCACTATGAGTTCTTaGCTTTCCTTCCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQCTMSS*LSFRPS
Trigger: AGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAGTGGGAACAGCACCTaGGAGGTCTTCATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRSGNST*EVFICL
Trigger: CAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCTTGTATGGATTCAGTaGGAACAGCACCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQLVWIQ*EQHLGG
Trigger: ACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGAACTGGTTTGTTGCTaGAGGCCCAAAACCCTTAGC +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQELVCC*RPKTLS
Trigger: GCTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGGTGCTCCTCTGCTGTaGGCAGGTTTCAGCATGACT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCGAPLL*AGFSMT
Trigger: AGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTGGCAGCTCCTTTTGTaGCCACTTGGACACAGTCTA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQWQLLL*PLGHSL
Trigger: TAGACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGGACTGGTTTCGGAGTaGCAGCTCCTTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCGLVSE*QLLLWP
Trigger: TGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGGCTGCTGGTATCGCTaGCCATTGTGTGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHGCWYR*PLCGFH
Trigger: ATGAAACCCACACAATGGCCAGCGATACCAGCAGCC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGATGGTTTCCTGCATTaGCCCTTGGGTAGCAATGTA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTDGFLH*PLGSNV
Trigger: TACATTGCTACCCAAGGGCCAATGCAGGAAACCATC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATCCAGGATCGCATCGTaGATAAACACATACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVSRIAS*INTYCS
Trigger: GGAGCAGTATGTGTTTATCCACGATGCGATCCTGGA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTTCTGGCCAGTACTGTaGACACAACTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHFWPVL*TQLGRI
Trigger: GATCCTGCCCAGTTGTGTCCACAGTACTGGCCAGAA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCAAATTCCACCTGGATaGGGCCGTGTCTGTGTACTC +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGQIPPG*GRVCVL
Trigger: GAGTACACAGACACGGCCCCATCCAGGTGGAATTTG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAATCCATCTTGGGGTCTaGCGGCATTGTAAATGCGGA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQIHLGV*RHCKCG
Trigger: TCCGCATTTACAATGCCGCCAGACCCCAAGATGGAT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCATCCATCTTGGGGTCTaGCGGCATTGTAAATGCGGA +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSIHLGV*RHCKCG
Trigger: TCCGCATTTACAATGCCGCCAGACCCCAAGATGGAT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATACATCCACGGTTCTCTaGTGCCGGAGCATCTCACAT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHTSTVL*CRSISH
Trigger: ATGTGAGATGCTCCGGCACCAGAGAACCGTGGATGT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTACATCCACGGTTCTCTaGTGCCGGAGCATCTCACAT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGTSTVL*CRSISH
Trigger: ATGTGAGATGCTCCGGCACCAGAGAACCGTGGATGT...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAGGAGTACGGGATTTaGCAACTGTGGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQKEYGI*QLWLCV
Trigger: CACACACAGCCACAGTTGCCAAATCCCGTACTCCTT...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGCTCTAGGAAGCCGGTaGCAAGGAGTACGGGATTTG +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCALGSR*QGVRDL
Trigger: CAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCTGGCACAAATGGGTCTaGGTAATAGGAATTAGGCAC +
Preference number: 4 (lower is better)
Translates to: LFFILFSSFLAESHGADCWHKWV*VIGIRH
Trigger: GTGCCTAATTCCTATTACCCAGACCCATTTGTGCCA...GCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCAGCATGAAAGAACCTaGTGGCATCCATGGATCAGA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQQHERT*WHPWIR
Trigger: TCTGATCCATGGATGCCATCAGGTTCTTTCATGCTG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACAGCATGAAAGAACCTaGTGGCATCCATGGATCAGA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQQHERT*WHPWIR
Trigger: TCTGATCCATGGATGCCATCAGGTTCTTTCATGCTG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACCTTCACGTAGACATTaGGTAACCCCGGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRPSRRH*VTPEEN
Trigger: ATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCGTGTGTTGAGGGTGTaGGTTTTCTGTATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHRVLRV*VFCIPA
Trigger: AGCTGGGATACAGAAAACTCACACCCTCAACACACG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACGTGTGTTGAGGGTGTaGGTTTTCTGTATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRRVLRV*VFCIPA
Trigger: AGCTGGGATACAGAAAACTCACACCCTCAACACACG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGACATTGGTGTATGGTaGCAGGTTAGTGATCGTGTG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWADIGVW*QVSDRV
Trigger: CACACGATCACTAACCTGTCACCATACACCAATGTC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGGATCAGTTTCACACTaGCATTGGTGTATGGTGACA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVGSVSH*HWCMVT
Trigger: TGTCACCATACACCAATGTCAGTGTGAAACTGATCC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCATCTGTCTGCACTATaGGTTCTTGGCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAHLSAL*VLGFPS
Trigger: GGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACTGATATTTTGGTGGTaGACTGGTTTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVLIFWW*TGLLLE
Trigger: CTCCAGCAACAAACCAGTTCACCACCAAAATATCAG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTGGCATAGAGGGTGCTaGTATTTTGGTGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQWHRGC*YFGGEL
Trigger: CAGTTCACCACCAAAATATCAGCACCCTCTATGCCA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTAGCAAAGTAGTACTGTaGGTTCAGCAGAGAAGCATT +
Preference number: 4 (lower is better)
Translates to: FFILFSSFLAESHGADCPSKVVL*VQQRSI
Trigger: AATGCTTCTCTGCTGAACTCACAGTACTACTTTGCT...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATGTGAAGGACGATGGTaGAGACACAGATCTCCCATT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQCEGRW*RHRSPI
Trigger: AATGGGAGATCTGTGTCTTCACCATCGTCCTTCACA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCACACTTCATCTGTGTaGTGTGCTGAAGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHHTSSV*CAEGGL
Trigger: CAGACCTCCTTCAGCACATCACACAGATGAAGTGTG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGTATTTGCAGCATTTaGCCCTTCCCACTTCCACAA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSICSI*PFPLPQ
Trigger: TTGTGGAAGTGGGAAGGGTCAAATGCTGCAAATACT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCTCTTTAATCTGGCTTaGGTTTGTCTGTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTLFNLA*VCLWIQ
Trigger: CTGGATCCACAGACAAACTCAAGCCAGATTAAAGAG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTCCACCTGGCGAATaGGCTTCAAGAAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLCPPGE*ASRRSA
Trigger: AGCGCTCCTTCTTGAAGCTCATTCGCCAGGTGGACA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACTTGGCTTTGTGGTATaGAAGGGATTGTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVLGFVV*KGLFAE
Trigger: CTCTGCAAACAATCCCTTTCATACCACAAAGCCAAG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCTTGGCTTTGTGGTATaGAAGGGATTGTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTLGFVV*KGLFAE
Trigger: CTCTGCAAACAATCCCTTTCATACCACAAAGCCAAG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCACTAATGGCCAGTTCTaGCCTGTTCCATGTACGTGT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSTNGQF*PVPCTC
Trigger: ACACGTACATGGAACAGGGCAGAACTGGCCATTAGT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAACTAATGGCCAGTTCTaGCCTGTTCCATGTACGTGT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQTNGQF*PVPCTC
Trigger: ACACGTACATGGAACAGGGCAGAACTGGCCATTAGT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACATCTCGCACATCAATaGCCTGTAACCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRHLAHQ*PVTRAC
Trigger: ACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCAACACCTCCTTCAGTaGGAATCATGCAGCGGTACT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGQHLLQ*ESCSGT
Trigger: AGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCAGCGGATAGTGATTTaGCGAGATTTGACCTCCACT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAQRIVI*RDLTST
Trigger: AGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTATAGACACTGACAGGTaGTCCTCTGCTGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLIDTDR*SSAVGR
Trigger: CCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTAT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCCAATTGTAAAAGGCTaGGCAGCTTGGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGPIVKG*AAWRLS
Trigger: AGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCCAATTGTAAAAGGCTaGGCAGCTTGGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHPIVKG*AAWRLS
Trigger: AGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCTTGCAGTGTTTTCGTaGCACACCATCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGLAVFS*HTILQK
Trigger: CTTCTGGAGGATGGTGTGGCACGAAAACACTGCAAG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCACCATGATGATACTTaGAGTGTTTTCGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTHHDDT*SVFVPH
Trigger: GTGTGGCACGAAAACACTGCAAGTATCATCATGGTG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCTCTTGGACTTGACTTaGCGCACGAATCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLLLDLT*RTNPSR
Trigger: CCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATACTGCTCCTCTGTTTaGACCATGTTCACCCTCCGT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRYCSSV*TMFTLR
Trigger: ACGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTA...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGGGGCAGGATGTCCATaGACCGGTTTTTCTCATGGT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCGAGCP*TGFSHG
Trigger: ACCATGAGAAAAACCGGTGCATGGACATCCTGCCCC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCCCAGGAACTGGAATTaGTGCACCATCCGATATCCA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHPRNWN*CTIRYP
Trigger: TGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCCATTGTACTCCTCTTaGCACTTGTCCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCPLYSS*HLSTWR
Trigger: TCGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGATAGGATTCCCCAGTaGCCCGTTATTGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHDRIPQ*PVIDLH
Trigger: GTGAAGGTCAATAACGGGCCACTGGGGAATCCTATC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGGAAGTGAGGAGTCCTaGTACATGGATGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQGSEES*YMDVLT
Trigger: TGTTAGGACATCCATGTACCAGGACTCCTCACTTCC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATTCTTGGGCCTCGCATaGGATCAGCACACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRFLGLA*DQHTLF
Trigger: GAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAA...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTGCACTATGAGTTCTTaGCTTTCCTTCCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGCTMSS*LSFRPS
Trigger: AGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTAGTGGGAACAGCACCTaGGAGGTCTTCATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSGNST*EVFICL
Trigger: CAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACTTGTATGGATTCAGTaGGAACAGCACCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRLVWIQ*EQHLGG
Trigger: ACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCTTGTATGGATTCAGTaGGAACAGCACCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHLVWIQ*EQHLGG
Trigger: ACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGAACTGGTTTGTTGCTaGAGGCCCAAAACCCTTAGC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHELVCC*RPKTLS
Trigger: GCTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTATTTTGGTGGTGAACTaGTTTGTTGCTGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAILVVN*FVAGGP
Trigger: TGGGCCTCCAGCAACAAACCAGTTCACCACCAAAAT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTTTTGTGGCCACTTaGACACAGTCTATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LFFILFSSFLAESHGADCPFVAT*TQSILV
Trigger: AACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGG...GCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCTGTTTCTCGGGTTCTaGGACTGGTTTCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLLFLGF*DWFRSG
Trigger: GCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCTTAGCCGAGTCCCATaGTGCAGACTGCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCLSRVP*CRLPFK
Trigger: TTTGAAGGGCAGTCTGCACCATGGGACTCGGCTAAG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGATGGTTTCCTGCATTaGCCCTTGGGTAGCAATGTA +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWADGFLH*PLGSNV
Trigger: TACATTGCTACCCAAGGGCCAATGCAGGAAACCATC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGATGGTTTCCTGCATTaGCCCTTGGGTAGCAATGTA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQDGFLH*PLGSNV
Trigger: TACATTGCTACCCAAGGGCCAATGCAGGAAACCATC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTCCAGGATCGCATCGTaGATAAACACATACTGCTCC +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQSRIAS*INTYCS
Trigger: GGAGCAGTATGTGTTTATCCACGATGCGATCCTGGA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTCCAGGATCGCATCGTaGATAAACACATACTGCTCC +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSSRIAS*INTYCS
Trigger: GGAGCAGTATGTGTTTATCCACGATGCGATCCTGGA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTACAGAGACCTAACTTaGGAAGCAGGCACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHYRDLT*EAGTEV
Trigger: CACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTACAGAGACCTAACTTaGGAAGCAGGCACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGYRDLT*EAGTEV
Trigger: CACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCACCGGTTTTTCTCATaGTTCCGGGGCAACAGTGCG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLHRFFS*FRGNSA
Trigger: CGCACTGTTGCCCCGGAACCATGAGAAAAACCGGTG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGTCTTTCACTGTGTTTaGCAAAGGATGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQVFHCV*QRMLGD
Trigger: GTCACCCAGCATCCTTTGCCAAACACAGTGAAAGAC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTACTGTGGACACAACTaGGCAGGATCCACATCATTT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTYCGHN*AGSTSF
Trigger: AAATGATGTGGATCCTGCCCAGTTGTGTCCACAGTA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTCTGGCCAGTACTGTaGACACAACTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCFWPVL*TQLGRI
Trigger: GATCCTGCCCAGTTGTGTCCACAGTACTGGCCAGAA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGTGTACTCCGTTTTCTaGCCAGTACTGTGGACACAA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQVYSVF*PVLWTQ
Trigger: TTGTGTCCACAGTACTGGCCAGAAAACGGAGTACAC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAATCCATCTTGGGGTCTaGCGGCATTGTAAATGCGGA +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRIHLGV*RHCKCG
Trigger: TCCGCATTTACAATGCCGCCAGACCCCAAGATGGAT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACACATGGAAAAGCTCTaGGTCCGTGAATCTGATCGT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQHMEKL*VRESDR
Trigger: ACGATCAGATTCACGGACCCAGAGCTTTTCCATGTG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCTGCAGTTGGCACAAATaGGTCTGGGTAATAGGAATT +
Preference number: 4 (lower is better)
Translates to: LFFILFSSFLAESHGADCCSWHK*VWVIGI
Trigger: AATTCCTATTACCCAGACCCATTTGTGCCAACTGCA...GCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTCGCTGGCCATTGTGTaGGTTTCATCATTTATTGGC +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSLAIV*VSSFIG
Trigger: GCCAATAAATGATGAAACCCACACAATGGCCAGCGA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATCACTTGCTCCCAATTaGAGTCATCACCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVSLAPN*SHHLQI
Trigger: AATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCAGCATGAAAGAACCTaGTGGCATCCATGGATCAGA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHQHERT*WHPWIR
Trigger: TCTGATCCATGGATGCCATCAGGTTCTTTCATGCTG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTACTTTGTTCTTGTCCTaGGAGCTGGACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLTLFLS*ELDQES
Trigger: GCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATTAGTGATCGTGTGTTaGGGGTGTGAGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVLVIVC*GCEFSV
Trigger: TACAGAAAACTCACACCCTCAACACACGATCACTAA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGGATCAGTTTCACACTaGCATTGGTGTATGGTGACA +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAGSVSH*HWCMVT
Trigger: TGTCACCATACACCAATGTCAGTGTGAAACTGATCC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACATCTGTCTGCACTATaGGTTCTTGGCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRHLSAL*VLGFPS
Trigger: GGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCTGATATTTTGGTGGTaGACTGGTTTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWALIFWW*TGLLLE
Trigger: CTCCAGCAACAAACCAGTTCACCACCAAAATATCAG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGGGCAGGTTTCAGCATaGCTGTCACGGTATTGTCAG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLGQVSA*LSRYCQ
Trigger: CTGACAATACCGTGACAGTCATGCTGAAACCTGCCC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGCAAAGTAGTACTGTaGGTTCAGCAGAGAAGCATT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSKVVL*VQQRSI
Trigger: AATGCTTCTCTGCTGAACTCACAGTACTACTTTGCT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAATAGCTCTTGTCCATTaGGTTCACCATCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVIALVH*VHHHSH
Trigger: ATGACTGTGATGGTGAACTCAATGGACAAGAGCTAT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGATAGCTCTTGTCCATTaGGTTCACCATCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLIALVH*VHHHSH
Trigger: ATGACTGTGATGGTGAACTCAATGGACAAGAGCTAT...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTGTGAAGGACGATGGTaGAGACACAGATCTCCCATT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGCEGRW*RHRSPI
Trigger: AATGGGAGATCTGTGTCTTCACCATCGTCCTTCACA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATGTGAAGGACGATGGTaGAGACACAGATCTCCCATT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRCEGRW*RHRSPI
Trigger: AATGGGAGATCTGTGTCTTCACCATCGTCCTTCACA...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTATTTGTTTTCATTGTaGAGGACGATGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: VLHSVLIFLSRVPWCRLPYLFSL*RTMVKT
Trigger: TGTCTTCACCATCGTCCTTCACAATGAAAACAAATA...GGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR TCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCAGCCTCACTCGGGAATaGTCGTATGCAATGATATTC +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSSLTRE*SYAMIF
Trigger: GAATATCATTGCATACGATCATTCCCGAGTGAGGCT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAGCCTCACTCGGGAATaGTCGTATGCAATGATATTC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWASLTRE*SYAMIF
Trigger: GAATATCATTGCATACGATCATTCCCGAGTGAGGCT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCTTGGCTTTGTGGTATaGAAGGGATTGTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSLGFVV*KGLFAE
Trigger: CTCTGCAAACAATCCCTTTCATACCACAAAGCCAAG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCAGCGGATAGTGATTTaGCGAGATTTGACCTCCACT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHQRIVI*RDLTST
Trigger: AGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGGTCTTCATCTGTCTaGACTATGAGTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTRSSSV*TMSSWL
Trigger: AAGCCAAGAACTCATAGTGCAGACAGATGAAGACCT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTCATCTCCTGTCGGGTaGTGCTCATGGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLSSPVG*CSWSLS
Trigger: GGAAAGAGACCATGAGCAGCACCCGACAGGAGATGA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAGCCGAGTCCCATGGTaGAGACTGCCCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLSRVPW*RLPFKE
Trigger: TTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTACTGCTCCTCTGTTTaGACCATGTTCACCCTCCGT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCYCSSV*TMFTLR
Trigger: ACGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAGGAACTGGAATTGCTaGACCATCCGATATCCATCT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWARNWNC*TIRYPS
Trigger: AGATGGATATCGGATGGTGCAGCAATTCCAGTTCCT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCAGGAACTGGAATTGCTaGACCATCCGATATCCATCT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSRNWNC*TIRYPS
Trigger: AGATGGATATCGGATGGTGCAGCAATTCCAGTTCCT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGGCAATAGGAACGGGTaGTTCTTTAACTACCAACTC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAGNRNG*FFNYQL
Trigger: GAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCAATTTTATAGCTCGTaGAATCGACTGGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGQFYSS*NRLAAG
Trigger: ACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACTTCCTTGTATaGATTCAGTGGGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQRYFLV*IQWEQH
Trigger: GTGCTGTTCCCACTGAATCCATACAAGGAAGTACCT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATATTTTGGTGGTGAACTaGTTTGTTGCTGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHILVVN*FVAGGP
Trigger: TGGGCCTCCAGCAACAAACCAGTTCACCACCAAAAT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGGACACAGTCTATTTTaGTTTCCCCATTGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQGHSLF*FPHWLY
Trigger: GTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGGACACAGTCTATTTTaGTTTCCCCATTGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSGHSLF*FPHWLY
Trigger: GTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTGGCAGCTCCTTTTGTaGCCACTTGGACACAGTCTA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCWQLLL*PLGHSL
Trigger: TAGACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTGCAATTTTAACTGTATaGTCTGTCTGTTTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: FFILFSSFLAESHGADCPAILTV*SVCFSG
Trigger: ACCCGAGAAACAGACAGACCATACAGTTAAAATTGC...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTCCAGAAGTCATAGATaGTTTCCTGCATTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSSRSHR*FPALAL
Trigger: AAGGGCCAATGCAGGAAACCATCTATGACTTCTGGA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGTCTTTCACTGTGTTTaGCAAAGGATGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHVFHCV*QRMLGD
Trigger: GTCACCCAGCATCCTTTGCCAAACACAGTGAAAGAC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGTCTTTCACTGTGTTTaGCAAAGGATGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRVFHCV*QRMLGD
Trigger: GTCACCCAGCATCCTTTGCCAAACACAGTGAAAGAC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGTGTACTCCGTTTTCTaGCCAGTACTGTGGACACAA +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRVYSVF*PVLWTQ
Trigger: TTGTGTCCACAGTACTGGCCAGAAAACGGAGTACAC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAGCATTACTGGGATTaGGCAGTGCAAGCAATTTTA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVQHYWD*AVQAIL
Trigger: TAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTAAGGAGTACGGGATTTaGCAACTGTGGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCKEYGI*QLWLCV
Trigger: CACACACAGCCACAGTTGCCAAATCCCGTACTCCTT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTGGCACAAATGGGTCTaGGTAATAGGAATTAGGCAC +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQWHKWV*VIGIRH
Trigger: GTGCCTAATTCCTATTACCCAGACCCATTTGTGCCA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTCACTTGCTCCCAATTaGAGTCATCACCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQSLAPN*SHHLQI
Trigger: AATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATCACTTGCTCCCAATTaGAGTCATCACCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQSLAPN*SHHLQI
Trigger: AATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCGTGTGTTGAGGGTGTaGGTTTTCTGTATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLRVLRV*VFCIPA
Trigger: AGCTGGGATACAGAAAACTCACACCCTCAACACACG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATTAGTGATCGTGTGTTaGGGGTGTGAGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQLVIVC*GCEFSV
Trigger: TACAGAAAACTCACACCCTCAACACACGATCACTAA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGGATCAGTTTCACACTaGCATTGGTGTATGGTGACA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGGSVSH*HWCMVT
Trigger: TGTCACCATACACCAATGTCAGTGTGAAACTGATCC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCATCTGTCTGCACTATaGGTTCTTGGCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCHLSAL*VLGFPS
Trigger: GGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCTGATATTTTGGTGGTaGACTGGTTTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGLIFWW*TGLLLE
Trigger: CTCCAGCAACAAACCAGTTCACCACCAAAATATCAG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACTGATATTTTGGTGGTaGACTGGTTTGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRLIFWW*TGLLLE
Trigger: CTCCAGCAACAAACCAGTTCACCACCAAAATATCAG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAGCAAAGTAGTACTGTaGGTTCAGCAGAGAAGCATT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWASKVVL*VQQRSI
Trigger: AATGCTTCTCTGCTGAACTCACAGTACTACTTTGCT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAATAGCTCTTGTCCATTaGGTTCACCATCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQIALVH*VHHHSH
Trigger: ATGACTGTGATGGTGAACTCAATGGACAAGAGCTAT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAGTATTTGCAGCATTTaGCCCTTCCCACTTCCACAA +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRSICSI*PFPLPQ
Trigger: TTGTGGAAGTGGGAAGGGTCAAATGCTGCAAATACT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGGTGACTATAAAAGCTaGAGGCTGTTTATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAGDYKS*RLFIAV
Trigger: GACAGCTATAAACAGCCTTCAGCTTTTATAGTCACC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGGTGACTATAAAAGCTaGAGGCTGTTTATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSGDYKS*RLFIAV
Trigger: GACAGCTATAAACAGCCTTCAGCTTTTATAGTCACC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGGTGACTATAAAAGCTaGAGGCTGTTTATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQGDYKS*RLFIAV
Trigger: GACAGCTATAAACAGCCTTCAGCTTTTATAGTCACC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTTGCATTTTGTGAACTaGGTCCTCCCCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHLHFVN*VLPQAF
Trigger: AAAAGCTTGGGGGAGGACTCAGTTCACAAAATGCAA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATTGCATTTTGTGAACTaGGTCCTCCCCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRLHFVN*VLPQAF
Trigger: AAAAGCTTGGGGGAGGACTCAGTTCACAAAATGCAA...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTTGCATTTTGTGAACTaGGTCCTCCCCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGLHFVN*VLPQAF
Trigger: AAAAGCTTGGGGGAGGACTCAGTTCACAAAATGCAA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCAAAGTGCCAACAGTTaGAGAAGTCCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLQSANS*RSPNSS
Trigger: GCTGGAGTTCGGACTTCTGCAACTGTTGGCACTTTG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGACTATATCCACATGTaGTATACGGCTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVDYIHM*YTAHQR
Trigger: TCTTTGATGAGCCGTATAGCACATGTGGATATAGTC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGACTATATCCACATGTaGTATACGGCTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTDYIHM*YTAHQR
Trigger: TCTTTGATGAGCCGTATAGCACATGTGGATATAGTC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCATCTCGCACATCAATaGCCTGTAACCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLHLAHQ*PVTRAC
Trigger: ACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCTTCAGTGCGAATCATaGAGCGGTACTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCLQCES*SGTFQH
Trigger: ATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCAGCGGATAGTGATTTaGCGAGATTTGACCTCCACT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCQRIVI*RDLTST
Trigger: AGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGGTCTTCATCTGTCTaGACTATGAGTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQRSSSV*TMSSWL
Trigger: AAGCCAAGAACTCATAGTGCAGACAGATGAAGACCT...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGGTGAACTGGTTTGTTaGTGGAGGCCCAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLGELVC*WRPKTL
Trigger: AAGGGTTTTGGGCCTCCAGCAACAAACCAGTTCACC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCCAATTGTAAAAGGCTaGGCAGCTTGGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLPIVKG*AAWRLS
Trigger: AGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCACCATGATGATACTTaGAGTGTTTTCGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHHHDDT*SVFVPH
Trigger: GTGTGGCACGAAAACACTGCAAGTATCATCATGGTG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACACCATGATGATACTTaGAGTGTTTTCGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRHHDDT*SVFVPH
Trigger: GTGTGGCACGAAAACACTGCAAGTATCATCATGGTG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCATCTCTCGGATTTCATaGACACCTCTCTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTISRIS*TPLFST
Trigger: TGTTGAAAAGAGAGGTGTGCATGAAATCCGAGAGAT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAATCTCTCGGATTTCATaGACACCTCTCTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVISRIS*TPLFST
Trigger: TGTTGAAAAGAGAGGTGTGCATGAAATCCGAGAGAT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGTGTTTGGCAAAGGATaGTGGGTGACTATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAVFGKG*WVTIKA
Trigger: AGCTTTTATAGTCACCCAGCATCCTTTGCCAAACAC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGTGTTTGGCAAAGGATaGTGGGTGACTATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQVFGKG*WVTIKA
Trigger: AGCTTTTATAGTCACCCAGCATCCTTTGCCAAACAC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTCATTTTCTTTAAGTTaGGGTAAGAGCAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWASFSLS*GKSRWA
Trigger: AGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCAATTTTATAGCTCGTaGAATCGACTGGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCQFYSS*NRLAAG
Trigger: ACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTTCTTGGGCCTCGCATaGGATCAGCACACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLFLGLA*DQHTLF
Trigger: GAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTACATTATATCCAAATaGCTCCCAGCGGATAGTGAT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTYIISK*LPADSD
Trigger: ATCACTATCCGCTGGGAGCCATTTGGATATAATGTA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTTCCTTCCGGCCCTCTaGGTTCATGAGGATCAGTTT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLFLPAL*VHEDQF
Trigger: AAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGGACACAGTCTATTTTaGTTTCCCCATTGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGGHSLF*FPHWLY
Trigger: GTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCCTTTTGTGGCCACTTaGACACAGTCTATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAPFVAT*TQSILV
Trigger: AACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCCTTTTGTGGCCACTTaGACACAGTCTATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSPFVAT*TQSILV
Trigger: AACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGGCAGCTCCTTTTGTaGCCACTTGGACACAGTCTA +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLWQLLL*PLGHSL
Trigger: TAGACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGCAATTTTAACTGTATaGTCTGTCTGTTTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVAILTV*SVCFSG
Trigger: ACCCGAGAAACAGACAGACCATACAGTTAAAATTGC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATGTGTGGGTTTCATCTaGGTAATAGGAATTAGGCAC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQCVGFI*VIGIRH
Trigger: GTGCCTAATTCCTATTACCCAGATGAAACCCACACA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000400053.8
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGATGGTTTCCTGCATTaGCCCTTGGGTAGCAATGTA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCDGFLH*PLGSNV
Trigger: TACATTGCTACCCAAGGGCCAATGCAGGAAACCATC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTCCAGAAGTCATAGATaGTTTCCTGCATTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGSRSHR*FPALAL
Trigger: AAGGGCCAATGCAGGAAACCATCTATGACTTCTGGA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTCCAGAAGTCATAGATaGTTTCCTGCATTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSRSHR*FPALAL
Trigger: AAGGGCCAATGCAGGAAACCATCTATGACTTCTGGA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGCCACTTGTCCACCTaGCGAATGAGCTTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLCHLST*RMSFKK
Trigger: CTTCTTGAAGCTCATTCGCCAGGTGGACAAGTGGCA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAAACGTCTTGGCTTTGTaGTATGAAAGGGATTGTTTG +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVNVLAL*YERDCL
Trigger: CAAACAATCCCTTTCATACCACAAAGCCAAGACGTT...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCAGCATTACTGGGATTaGGCAGTGCAAGCAATTTTA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQQHYWD*AVQAIL
Trigger: TAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAAGGAGTACGGGATTTaGCAACTGTGGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLKEYGI*QLWLCV
Trigger: CACACACAGCCACAGTTGCCAAATCCCGTACTCCTT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATGCAGTTGGCACAAATaGGTCTGGGTAATAGGAATT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQCSWHK*VWVIGI
Trigger: AATTCCTATTACCCAGACCCATTTGTGCCAACTGCA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
3UTR CAA 72 bp GTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTaGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VFISFAQIPWNV*ALWYERDCLQS
Trigger: GCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTCATCACCTTCAGATTaGCTATATCCACATGTGCTA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQSSPSD*LYPHVL
Trigger: TAGCACATGTGGATATAGTCAATCTGAAGGTGATGA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTCACTTGCTCCCAATTaGAGTCATCACCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSLAPN*SHHLQI
Trigger: AATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCAACTCTGCATAGTTTaGTATTCCAACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHQLCIV*YSNTSF
Trigger: GAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCAACTCTGCATAGTTTaGTATTCCAACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGQLCIV*YSNTSF
Trigger: GAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAACAGTAGTGGACAGTaGGATTATAACTGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRNSSGQ*DYNCGN
Trigger: GTTGCCACAGTTATAATCTCACTGTCCACTACTGTT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGGCATAGAGGGTGCTaGTATTTTGGTGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLWHRGC*YFGGEL
Trigger: CAGTTCACCACCAAAATATCAGCACCCTCTATGCCA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATATAGCTCTTGTCCATTaGGTTCACCATCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHIALVH*VHHHSH
Trigger: ATGACTGTGATGGTGAACTCAATGGACAAGAGCTAT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATATTTGTTTTCATTGTaGAGGACGATGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVYLFSL*RTMVKT
Trigger: TGTCTTCACCATCGTCCTTCACAATGAAAACAAATA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTATTTGTTTTCATTGTaGAGGACGATGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTYLFSL*RTMVKT
Trigger: TGTCTTCACCATCGTCCTTCACAATGAAAACAAATA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTAGCCTCACTCGGGAATaGTCGTATGCAATGATATTC +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSLTRE*SYAMIF
Trigger: GAATATCATTGCATACGATCATTCCCGAGTGAGGCT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGCCATTGATATAGTCTaGGTTTGTGTCTCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQAIDIV*VCVSFY
Trigger: ATAGAAGGAGACACAAACTCAGACTATATCAATGGC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTAGTATTTGCAGCATTTaGCCCTTCCCACTTCCACAA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSICSI*PFPLPQ
Trigger: TTGTGGAAGTGGGAAGGGTCAAATGCTGCAAATACT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGGTGACTATAAAAGCTaGAGGCTGTTTATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHGDYKS*RLFIAV
Trigger: GACAGCTATAAACAGCCTTCAGCTTTTATAGTCACC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCGTGAATCTGATCGTTaGGTTTTGCATTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWARESDR*VLHFVN
Trigger: GTTCACAAAATGCAAAACTCAACGATCAGATTCACG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACGTGAATCTGATCGTTaGGTTTTGCATTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQRESDR*VLHFVN
Trigger: GTTCACAAAATGCAAAACTCAACGATCAGATTCACG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTACTAATGGCCAGTTCTaGCCTGTTCCATGTACGTGT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLTNGQF*PVPCTC
Trigger: ACACGTACATGGAACAGGGCAGAACTGGCCATTAGT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCAGCGGATAGTGATTTaGCGAGATTTGACCTCCACT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLQRIVI*RDLTST
Trigger: AGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTAGGTCTTCATCTGTCTaGACTATGAGTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGRSSSV*TMSSWL
Trigger: AAGCCAAGAACTCATAGTGCAGACAGATGAAGACCT...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGTCAAAGGAACTGACTaGTTTGTAGGTGATCTCATA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQVKGTD*FVGDLI
Trigger: TATGAGATCACCTACAAAGCAGTCAGTTCCTTTGAC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGTCAAAGGAACTGACTaGTTTGTAGGTGATCTCATA +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQVKGTD*FVGDLI
Trigger: TATGAGATCACCTACAAAGCAGTCAGTTCCTTTGAC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGTGTTTGGCAAAGGATaGTGGGTGACTATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHVFGKG*WVTIKA
Trigger: AGCTTTTATAGTCACCCAGCATCCTTTGCCAAACAC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTAGGAACTGGAATTGCTaGACCATCCGATATCCATCT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCRNWNC*TIRYPS
Trigger: AGATGGATATCGGATGGTGCAGCAATTCCAGTTCCT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATGAAAGGGATTGTTTaGAGAGCTGTTTACACCATC +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQMKGIV*RAVYTI
Trigger: GATGGTGTAAACAGCTCTGCAAACAATCCCTTTCAT...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGTCTTCATCTCTTTTaGACAAATACCATGGAACGT +
Preference number: 4 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSLHLF*TNTMER
Trigger: ACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTCATTTTCTTTAAGTTaGGGTAAGAGCAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGSFSLS*GKSRWA
Trigger: AGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTCATTTTCTTTAAGTTaGGGTAAGAGCAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSFSLS*GKSRWA
Trigger: AGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGGAAGTGAGGAGTCCTaGTACATGGATGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLGSEES*YMDVLT
Trigger: TGTTAGGACATCCATGTACCAGGACTCCTCACTTCC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTACATTATATCCAAATaGCTCCCAGCGGATAGTGAT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAYIISK*LPADSD
Trigger: ATCACTATCCGCTGGGAGCCATTTGGATATAATGTA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTACATTATATCCAAATaGCTCCCAGCGGATAGTGAT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSYIISK*LPADSD
Trigger: ATCACTATCCGCTGGGAGCCATTTGGATATAATGTA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGCAATTTTAACTGTATaGTCTGTCTGTTTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQAILTV*SVCFSG
Trigger: ACCCGAGAAACAGACAGACCATACAGTTAAAATTGC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTCCAGAAGTCATAGATaGTTTCCTGCATTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSRSHR*FPALAL
Trigger: AAGGGCCAATGCAGGAAACCATCTATGACTTCTGGA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTTTGGCAAAGGATGCTaGGTGACTATAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQFGKGC*VTIKAE
Trigger: TTCAGCTTTTATAGTCACCCAGCATCCTTTGCCAAA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTTTGGCAAAGGATGCTaGGTGACTATAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAFGKGC*VTIKAE
Trigger: TTCAGCTTTTATAGTCACCCAGCATCCTTTGCCAAA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGTCTTTCACTGTGTTTaGCAAAGGATGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLVFHCV*QRMLGD
Trigger: GTCACCCAGCATCCTTTGCCAAACACAGTGAAAGAC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTACTGTGGACACAACTaGGCAGGATCCACATCATTT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCYCGHN*AGSTSF
Trigger: AAATGATGTGGATCCTGCCCAGTTGTGTCCACAGTA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCAGCATTACTGGGATTaGGCAGTGCAAGCAATTTTA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHQHYWD*AVQAIL
Trigger: TAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTACAATATAAACACATaGAAAAGCTCTGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWAYNINT*KSSGSV
Trigger: CACGGACCCAGAGCTTTTCCATGTGTTTATATTGTA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTGGCACAAATGGGTCTaGGTAATAGGAATTAGGCAC +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCWHKWV*VIGIRH
Trigger: GTGCCTAATTCCTATTACCCAGACCCATTTGTGCCA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTCATCACCTTCAGATTaGCTATATCCACATGTGCTA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSSPSD*LYPHVL
Trigger: TAGCACATGTGGATATAGTCAATCTGAAGGTGATGA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGGATCAGTTTCACACTaGCATTGGTGTATGGTGACA +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLGSVSH*HWCMVT
Trigger: TGTCACCATACACCAATGTCAGTGTGAAACTGATCC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTACGGTATTGTCAGTTTaGTTCAAAGGTGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGTVLSV*FKGVSS
Trigger: ACTTGAGACACCTTTGAATCAAACTGACAATACCGT...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTATAGCTCTTGTCCATTaGGTTCACCATCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCIALVH*VHHHSH
Trigger: ATGACTGTGATGGTGAACTCAATGGACAAGAGCTAT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCAATGATCGTATGCAATaGTATTCCCGTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSNDRMQ*YSRICS
Trigger: AGAACAGATACGGGAATATCATTGCATACGATCATT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAATGATCGTATGCAATaGTATTCCCGTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWANDRMQ*YSRICS
Trigger: AGAACAGATACGGGAATATCATTGCATACGATCATT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAGCCTCACTCGGGAATaGTCGTATGCAATGATATTC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLSLTRE*SYAMIF
Trigger: GAATATCATTGCATACGATCATTCCCGAGTGAGGCT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGCCATTGATATAGTCTaGGTTTGTGTCTCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGAIDIV*VCVSFY
Trigger: ATAGAAGGAGACACAAACTCAGACTATATCAATGGC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCCATTGATATAGTCTaGGTTTGTGTCTCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRAIDIV*VCVSFY
Trigger: ATAGAAGGAGACACAAACTCAGACTATATCAATGGC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCTCTTTAATCTGGCTTaGGTTTGTCTGTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLLFNLA*VCLWIQ
Trigger: CTGGATCCACAGACAAACTCAAGCCAGATTAAAGAG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGAAACAATACAAATCTaGCAGAAACGACGACTCATA +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQETIQI*QKRRLI
Trigger: TATGAGTCGTCGTTTCTGTCAGATTTGTATTGTTTC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCGTGAATCTGATCGTTaGGTTTTGCATTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGRESDR*VLHFVN
Trigger: GTTCACAAAATGCAAAACTCAACGATCAGATTCACG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGACTATATCCACATGTaGTATACGGCTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRDYIHM*YTAHQR
Trigger: TCTTTGATGAGCCGTATAGCACATGTGGATATAGTC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGTCAAAGGAACTGACTaGTTTGTAGGTGATCTCATA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGVKGTD*FVGDLI
Trigger: TATGAGATCACCTACAAAGCAGTCAGTTCCTTTGAC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAGGAACTGGAATTGCTaGACCATCCGATATCCATCT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLRNWNC*TIRYPS
Trigger: AGATGGATATCGGATGGTGCAGCAATTCCAGTTCCT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATATGAAAGGGATTGTTTaGAGAGCTGTTTACACCATC +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHMKGIV*RAVYTI
Trigger: GATGGTGTAAACAGCTCTGCAAACAATCCCTTTCAT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGTCTTCATCTCTTTTaGACAAATACCATGGAACGT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQSLHLF*TNTMER
Trigger: ACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACT...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTAGTCTTCATCTCTTTTaGACAAATACCATGGAACGT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWASLHLF*TNTMER
Trigger: ACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGGCAATAGGAACGGGTaGTTCTTTAACTACCAACTC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLGNRNG*FFNYQL
Trigger: GAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACTCATATTCTGTATCTaGGTCAAGGTGTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQLIFCI*VKVSNF
Trigger: AAAATTGGACACCTTGACCCAGATACAGAATATGAG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCTCATATTCTGTATCTaGGTCAAGGTGTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQLIFCI*VKVSNF
Trigger: AAAATTGGACACCTTGACCCAGATACAGAATATGAG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCTCATATTCTGTATCTaGGTCAAGGTGTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWALIFCI*VKVSNF
Trigger: AAAATTGGACACCTTGACCCAGATACAGAATATGAG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAGGTACTTCCTTGTATaGATTCAGTGGGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLRYFLV*IQWEQH
Trigger: GTGCTGTTCCCACTGAATCCATACAAGGAAGTACCT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTACCATATGTTTGAGTTaGTTCTCTCCACTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: QHYWDWAVQAILETLSWATICLS*FSPLKK
Trigger: TTTCTTCAGTGGAGAGAACCAACTCAAACATATGGT...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGGACACAGTCTATTTTaGTTTCCCCATTGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLGHSLF*FPHWLY
Trigger: GTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCCTTTTGTGGCCACTTaGACACAGTCTATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCPFVAT*TQSILV
Trigger: AACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGCAATTTTAACTGTATaGTCTGTCTGTTTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGAILTV*SVCFSG
Trigger: ACCCGAGAAACAGACAGACCATACAGTTAAAATTGC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTTTGGCAAAGGATGCTaGGTGACTATAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGFGKGC*VTIKAE
Trigger: TTCAGCTTTTATAGTCACCCAGCATCCTTTGCCAAA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTACAATATAAACACATaGAAAAGCTCTGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHYNINT*KSSGSV
Trigger: CACGGACCCAGAGCTTTTCCATGTGTTTATATTGTA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTCATCACCTTCAGATTaGCTATATCCACATGTGCTA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSSPSD*LYPHVL
Trigger: TAGCACATGTGGATATAGTCAATCTGAAGGTGATGA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAACAGTAGTGGACAGTaGGATTATAACTGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLNSSGQ*DYNCGN
Trigger: GTTGCCACAGTTATAATCTCACTGTCCACTACTGTT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTACGGTATTGTCAGTTTaGTTCAAAGGTGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCTVLSV*FKGVSS
Trigger: ACTTGAGACACCTTTGAATCAAACTGACAATACCGT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAGCAAAGTAGTACTGTaGGTTCAGCAGAGAAGCATT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLSKVVL*VQQRSI
Trigger: AATGCTTCTCTGCTGAACTCACAGTACTACTTTGCT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTATTTGTTTTCATTGTaGAGGACGATGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGYLFSL*RTMVKT
Trigger: TGTCTTCACCATCGTCCTTCACAATGAAAACAAATA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTATTTGTTTTCATTGTaGAGGACGATGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHYLFSL*RTMVKT
Trigger: TGTCTTCACCATCGTCCTTCACAATGAAAACAAATA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATAATGATCGTATGCAATaGTATTCCCGTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHNDRMQ*YSRICS
Trigger: AGAACAGATACGGGAATATCATTGCATACGATCATT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGCCATTGATATAGTCTaGGTTTGTGTCTCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCAIDIV*VCVSFY
Trigger: ATAGAAGGAGACACAAACTCAGACTATATCAATGGC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGAAACAATACAAATCTaGCAGAAACGACGACTCATA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHETIQI*QKRRLI
Trigger: TATGAGTCGTCGTTTCTGTCAGATTTGTATTGTTTC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAATAGTGAAAATCGATaGAGTGGGTGTCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: AQIPWNVLALWYERDCLQNSENR*SGCHFL
Trigger: AAGAAAATGACACCCACTGCATCGATTTTCACTATT...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAATAGTGAAAATCGATaGAGTGGGTGTCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQNSENR*SGCHFL
Trigger: AAGAAAATGACACCCACTGCATCGATTTTCACTATT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTATCTCTCGGATTTCATaGACACCTCTCTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCISRIS*TPLFST
Trigger: TGTTGAAAAGAGAGGTGTGCATGAAATCCGAGAGAT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTATGAAAGGGATTGTTTaGAGAGCTGTTTACACCATC +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCMKGIV*RAVYTI
Trigger: GATGGTGTAAACAGCTCTGCAAACAATCCCTTTCAT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAGTCTTCATCTCTTTTaGACAAATACCATGGAACGT +
Preference number: 4 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRSLHLF*TNTMER
Trigger: ACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATACCATATGTTTGAGTTaGTTCTCTCCACTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHTICLS*FSPLKK
Trigger: TTTCTTCAGTGGAGAGAACCAACTCAAACATATGGT...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGTGGGTTTCATCTaGGTAATAGGAATTAGGCAC +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLCVGFI*VIGIRH
Trigger: GTGCCTAATTCCTATTACCCAGATGAAACCCACACA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000400053.8
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGCAGTTGGCACAAATaGGTCTGGGTAATAGGAATT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLCSWHK*VWVIGI
Trigger: AATTCCTATTACCCAGACCCATTTGTGCCAACTGCA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
3UTR CAA 72 bp ATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTaGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: ISFAQIPWNVLA*WYERDCLQSCL
Trigger: TAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGAAACAATACAAATCTaGCAGAAACGACGACTCATA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCETIQI*QKRRLI
Trigger: TATGAGTCGTCGTTTCTGTCAGATTTGTATTGTTTC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR GCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGTCAAAGGAACTGACTaGTTTGTAGGTGATCTCATA +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLVKGTD*FVGDLI
Trigger: TATGAGATCACCTACAAAGCAGTCAGTTCCTTTGAC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTACCATATGTTTGAGTTaGTTCTCTCCACTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SFAQIPWNVLALWYERDCTICLS*FSPLKK
Trigger: TTTCTTCAGTGGAGAGAACCAACTCAAACATATGGT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAACGTCTTGGCTTTGTaGTATGAAAGGGATTGTTTG +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLNVLAL*YERDCL
Trigger: CAAACAATCCCTTTCATACCACAAAGCCAAGACGTT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR TCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTAATGATCGTATGCAATaGTATTCCCGTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLNDRMQ*YSRICS
Trigger: AGAACAGATACGGGAATATCATTGCATACGATCATT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CCA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCTCATATTCTGTATCTaGGTCAAGGTGTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLLIFCI*VKVSNF
Trigger: AAAATTGGACACCTTGACCCAGATACAGAATATGAG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp GTCCGGCCAAAGTCGCCAGGCAAGTCCCAAGTCCCCTCATGGTGCTaGGTGCGGGCCGGGCCGCTCCCCGGCGGCGGTGGGTGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: VRPKSPGKSQVPSWC*VRAGPLPGGGGWAR
Trigger: GCGCGCCCACCCACCGCCGCCGGGGAGCGGCCCGGCCCGCACTCAGCACCATGAGGGGACTTGGGACTTGCCTGGCGACTTTGGCCGGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS GCA 90 bp CTTCGAGCCTGGCGCCGGACGGCGATGTCACCGCACAGGGCCAGCTaGACCCGGAGTCGCCGGGCCTGCGCTGCTCGGCGGCTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: LRAWRRTAMSPHRAS*TRSRRACAARRLRE
Trigger: TTCCCGCAGCCGCCGAGCAGCGCAGGCCCGGCGACTCCGGGTGCAGCTGGCCCTGTGCGGTGACATCGCCGTCCGGCGCCAGGCTCGAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS GCA 90 bp TTCCCTCGGTTCCGGTTGCTGAGCTCGCCGCCTCTCCCCTTCCCCTaGCCGGGACCCGGGACCCGAGCTGCCGGCCGTGGCCGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: FPRFRLLSSPPLPFP*PGPGTRAAGRGRGG
Trigger: ACCGCCACGGCCACGGCCGGCAGCTCGGGTCCCGGGTCCCGGGCAGGGGAAGGGGAGAGGCGGCGAGCTCAGCAACCGGAACCGAGGGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS GCA 90 bp GGTAAACAGCAGAGCGCTAAGCCAAGCCCCCAAAGTGCCAACAGTTaGAGAAGTCCGAACTCCAGCGGCTCCAGGGGCGCGGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: GKQQSAKPSPQSANS*RSPNSSGSRGAGTG
Trigger: CCCTGTGCCCGCGCCCCTGGAGCCGCTGGAGTTCGGACTTCTGCAACTGTTGGCACTTTGGGGGCTTGGCTTAGCGCTCTGCTGTTTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS CCA 90 bp TATAGCTCGTGGAATCGACTGGCTGCCGGTCATTCCAGCTCCCACTaGCCGTGCAGTACTCCACCTCTCGGGCCACAATGGGCCCATCCC +
Preference number: 5 (lower is better)
Translates to: YSSWNRLAAGHSSSH*PCSTPPLGPQWAHP
Trigger: GGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS CCA 90 bp CCTGAGAGCCCCGCTGGTGTCCAGCCTCTAGGCTGGGAGAAAGCTTaGGGGGCTCCTTGTAGGGTGGTTGAACATCAGCAGGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: PESPAGVQPLGWEKA*GAPCRVVEHQQAWS
Trigger: GCTCCAAGCCTGCTGATGTTCAACCACCCTACAAGGAGCCCCCCAAGCTTTCTCCCAGCCTAGAGGCTGGACACCAGCGGGGCTCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580949.1
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGCACTGGGCGGGCTCTaGGACTTGACTTGCCGCACG +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVAALGGL*DLTCRT
Trigger: CGTGCGGCAAGTCAAGTCCAAGAGCCCGCCCAGTGC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACGGCCTTCCCCGCCATaGTACTCCTCTTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLARPSPP*YSSCHL
Trigger: CAAGTGGCAAGAGGAGTACAATGGCGGGGAAGGCCG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAAAGCCTCGTCGCAGTTaGTGCCCTGCTCAGCATAGC +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAKPRRS*CPAQHS
Trigger: GCTATGCTGAGCAGGGCACAAACTGCGACGAGGCTT...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCGGCCTTCCCCGCCATaGTACTCCTCTTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVARPSPP*YSSCHL
Trigger: CAAGTGGCAAGAGGAGTACAATGGCGGGGAAGGCCG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp GCTCCTCTGTTTGCACCATGTTCACCCTCCGTGACCGCAGCTCCCTaGCGCAGTTGTAGATGTCTACGACCCCTTCCCTTTCGGCCATGT +
Preference number: 5 (lower is better)
Translates to: APLFAPCSPSVTAAP*RSCRCLRPLPFRPC
Trigger: ACATGGCCGAAAGGGAAGGGGTCGTAGACATCTACAACTGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATGGTGCAAACAGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
ENST00000583153.2
CDS TCA 90 bp GGTGATGAGCGGGAGTACCTCTGTTTGCACCATGTTCACCCTCCGTaGCCGCAGCTCCCTGACGCAGTTGTAGATGTCTACGACCCCTTC +
Preference number: 5 (lower is better)
Translates to: GDEREYLCLHHVHPP*PQLPDAVVDVYDPF
Trigger: GAAGGGGTCGTAGACATCTACAACTGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATGGTGCAAACAGAGGTACTCCCGCTCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CCA 90 bp CGCTTAGACACTGGTGTGTCCCTGTACATCGGCCAGCCCAGGAACTaGAATTGCTGCACCATCCGATATCCATCTTGGGGTCTGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RLDTGVSLYIGQPRN*NCCTIRYPSWGLAA
Trigger: TGCCGCCAGACCCCAAGATGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCCGATGTACAGGGACACACCAGTGTCTAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACTGCACTATGAGTTCTaGGCTTTCCTTCCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLALHYEF*AFLPAL
Trigger: GAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACCTCTACTCGCAGCGTaGGTGTCACCATGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAPLLAA*VSPCLA
Trigger: CGCTAAACATGGTGACACCAACGCTGCGAGTAGAGG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATACTCCTCTTGCCACTaGTCCACCTGGCGAATGAGC +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAYSSCH*STWRMS
Trigger: GCTCATTCGCCAGGTGGACAAGTGGCAAGAGGAGTA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp GTACCTCTGTTTGCACCATGTTCACCCTCCGTGACCGCAGCTCCCTaGCGCAGTTGTAGATGTCTACGACCCCTTCCCTTTCGGCCATGT +
Preference number: 5 (lower is better)
Translates to: VPLFAPCSPSVTAAP*RSCRCLRPLPFRPC
Trigger: ACATGGCCGAAAGGGAAGGGGTCGTAGACATCTACAACTGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATGGTGCAAACAGAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS GCA 90 bp CGTCGGCCGGCTCTCGCTTCTTGTAAGTATGGGACTGCACCAGGCTaGTGGTATCGCTGGCCATTGTGTGGGTTTCATCTGGGTAATAGG +
Preference number: 5 (lower is better)
Translates to: RRPALASCKYGTAPG*WYRWPLCGFHLGNR
Trigger: CCTATTACCCAGATGAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCCATACTTACAAGAAGCGAGAGCCGGCCGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000580838.1
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATCCCCATTGATGGAGTaGGCGTTGAGCTGTATCCAC +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLASPLME*ALSCIH
Trigger: GTGGATACAGCTCAACGCCAACTCCATCAATGGGGA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACCAGCGGATAGTGATTaGCCGAGATTTGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAPADSD*PRFDLH
Trigger: GTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCCTCTACTCGCAGCGTaGGTGTCACCATGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVAPLLAA*VSPCLA
Trigger: CGCTAAACATGGTGACACCAACGCTGCGAGTAGAGG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACAAGGAGTACGGGATTaGGCAACTGTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAQGVRD*ATVAVC
Trigger: ACACACAGCCACAGTTGCCAAATCCCGTACTCCTTG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGCCGCCGCCAGAAGTTaGTCCCGGGTCACGAGCCGC +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQAAARS*SRVTSR
Trigger: GCGGCTCGTGACCCGGGACAAACTTCTGGCGGCGGC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTTCCCCATTGATGGAGTaGGCGTTGAGCTGTATCCAC +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVASPLME*ALSCIH
Trigger: GTGGATACAGCTCAACGCCAACTCCATCAATGGGGA...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACTACTTCTAGTTTTCTaGGGCCTCGCATGGGATCAG +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLALLLVF*GLAWDQ
Trigger: CTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS GCA 90 bp CGTCGGCCGGCTCTCGCTTCTTGTAAGTATGGGACTGCACCAGGCTaGTGGTATCGCTGGCCATTGTGTGGGTTTCATCATTTATTGGCA +
Preference number: 5 (lower is better)
Translates to: RRPALASCKYGTAPG*WYRWPLCGFHHLLA
Trigger: TGCCAATAAATGATGAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCCATACTTACAAGAAGCGAGAGCCGGCCGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS CCA 90 bp TGTATCTGGGTCAAGGTGTCCAATTTTATAGCTCGTGGAATCGACTaGCTGCCGGTCATTCCAGCTCCCACTGGCCGTGCAGTACTCCAC +
Preference number: 5 (lower is better)
Translates to: CIWVKVSNFIARGID*LPVIPAPTGRAVLH
Trigger: GTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS CCA 90 bp CGGCCGGCTCTCGCTTCTTGTAAGTATGGGACTGCACCAGGCTGCTaGTATCGCTGGCCATTGTGTGGGTTTCATCTGGGTAATAGGAAT +
Preference number: 5 (lower is better)
Translates to: RPALASCKYGTAPGC*YRWPLCGFHLGNRN
Trigger: ATTCCTATTACCCAGATGAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCCATACTTACAAGAAGCGAGAGCCGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000580838.1
CDS CCA 90 bp ACCTTGATTTCCTTCAGAGGAGCATCTCGCACATCAATGCCAGGATaGAGGGAGAGGGTTCCCATAGGCAGTCAGCTCCCCAAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: TLISFRGASRTSMPG*RERVPIGSQLPKEG
Trigger: CCCTTCTTTGGGGAGCTGACTGCCTATGGGAACCCTCTCCCTCCATCCTGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578916.2
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCTACTTCTAGTTTTCTaGGGCCTCGCATGGGATCAG +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVALLLVF*GLAWDQ
Trigger: CTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTTCATCTGGCCAGTATTaGCAGCATTTGACCCTTCCC +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVASSGQY*QHLTLP
Trigger: GGGAAGGGTCAAATGCTGCAAATACTGGCCAGATGA...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTATACAGAGACCTAACTaGGGAAGCAGGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVAIQRPN*GSRHRG
Trigger: ACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTAT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGCAGCATTACTGGGATaGGGCAGTGCAAGCAATTTT +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAAALLG*GSASNF
Trigger: AAAATTGCTTGCACTGCCCAATCCCAGTAATGCTGC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp GATAAACACATACTGCTCCTCTGTTTGCACCATGTTCACCCTCCGTaGCCGCAGCTCCCTGACGCAGTTGTAGATGTCTACGACCCCTTC +
Preference number: 5 (lower is better)
Translates to: DKHILLLCLHHVHPP*PQLPDAVVDVYDPF
Trigger: GAAGGGGTCGTAGACATCTACAACTGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTATGTGTTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
ENST00000583153.2
CDS GCA 90 bp GGGTGCTTGATGAGCAGGGCCTGGTTTGGGAACCTCACTTCTATCTaGATCGCAAAGCACCTGGGGATGCATGGTATGAAAGGTGGTACA +
Preference number: 5 (lower is better)
Translates to: GCLMSRAWFGNLTSI*IAKHLGMHGMKGGT
Trigger: TGTACCACCTTTCATACCATGCATCCCCAGGTGCTTTGCGATGCAGATAGAAGTGAGGTTCCCAAACCAGGCCCTGCTCATCAAGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578093.1
CDS CCA 90 bp CGGCCGGCTCTCGCTTCTTGTAAGTATGGGACTGCACCAGGCTGCTaGTATCGCTGGCCATTGTGTGGGTTTCATCATTTATTGGCACTA +
Preference number: 5 (lower is better)
Translates to: RPALASCKYGTAPGC*YRWPLCGFHHLLAL
Trigger: TAGTGCCAATAAATGATGAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCCATACTTACAAGAAGCGAGAGCCGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATTCCCTCGGTTCCGGTaGCTGAGCTCGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQFPRFR*LSSPPL
Trigger: GAGAGGCGGCGAGCTCAGCAACCGGAACCGAGGGAA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTAGGGGGCCGGGAGCTTaGGTTCCGAGGCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGRGPGA*VPRQRG
Trigger: TCCTCGCTGCCTCGGAACCAAAGCTCCCGGCCCCCT...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAGGGGGCCGGGAGCTTaGGTTCCGAGGCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRRGPGA*VPRQRG
Trigger: TCCTCGCTGCCTCGGAACCAAAGCTCCCGGCCCCCT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATGGACACAGTCTATTTaGGTTTCCCCATTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAWTQSI*VSPLAL
Trigger: TAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCACCCACTTCCACAAGATaGGTCACCATGATGATACTT +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAPTSTR*VTMMIL
Trigger: AAGTATCATCATGGTGACCAATCTTGTGGAAGTGGG...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGCACTGGGCGGGCTCTaGGACTTGACTTGCCGCACG +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQALGGL*DLTCRT
Trigger: CGTGCGGCAAGTCAAGTCCAAGAGCCCGCCCAGTGC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATGGAACGTCTTGGCTTaGTGGTATGAAAGGGATTGT +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAWNVLA*WYERDC
Trigger: ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS GCA 90 bp AGTTTCACCGAAGGGTCAGTGATAAATGGTAAGATTAGAGAAGCATaGTCCGGCAGGAGCCTGAAGAGGAGACACGCACAGGATTGGGCC +
Preference number: 5 (lower is better)
Translates to: SFTEGSVINGKIREA*SGRSLKRRHAQDWA
Trigger: GGCCCAATCCTGTGCGTGTCTCCTCTTCAGGCTCCTGCCGGAGCATGCTTCTCTAATCTTACCATTTATCACTGACCCTTCGGTGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400053.8
CDS CCA 90 bp TCTCATATTCTGTATCTGGGTCAAGGTGTCCAATTTTATAGCTCGTaGAATCGACTGGCTGCCGGTCATTCCAGCTCCCACTGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: SHILYLGQGVQFYSS*NRLAAGHSSSHWPC
Trigger: GCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS CCA 90 bp GGAACAGCACCTGGGAGGTCTTCATCTGTCTGCACTATGAGTTCTTaGCTTTCCTTCCGGCCCTCTGGGTTCATGAGGATCAGTTTCACA +
Preference number: 5 (lower is better)
Translates to: GTAPGRSSSVCTMSS*LSFRPSGFMRISFT
Trigger: TGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578698.1
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTTACTTCTTCTCGCACTaGTTCTTGTCCTCCAACTTG +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVAYFFSH*FLSSNL
Trigger: CAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTA...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAGGCTCTACTAGCAGCTaGGAAATAAATTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAGSTSS*EINSVA
Trigger: AGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCC...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTTCCTTTTGTGGCCACTaGGACACAGTCTATTTTGGT +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVASFCGH*DTVYFG
Trigger: ACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGA...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCATAGCTCTTGTCCATaGAGTTCACCATCACAGTCA +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVAHSSCP*SSPSQS
Trigger: TGACTGTGATGGTGAACTCAATGGACAAGAGCTATG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCAAGCCTCGTCGCAGTTaGTGCCCTGCTCAGCATAGC +
Preference number: 5 (lower is better)
Translates to: LFFILFSSFLAESHGADCKPRRS*CPAQHS
Trigger: GCTATGCTGAGCAGGGCACAAACTGCGACGAGGCTT...GCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTCCCACTTCCACAAGATaGGTCACCATGATGATACTT +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVAPTSTR*VTMMIL
Trigger: AAGTATCATCATGGTGACCAATCTTGTGGAAGTGGG...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGGCGGGCTCTTGGACTaGACTTGCCGCACGAATCCC +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQGGLLD*TCRTNP
Trigger: GGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTGGCGGGCTCTTGGACTaGACTTGCCGCACGAATCCC +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAGGLLD*TCRTNP
Trigger: GGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCC...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGCACTGGGCGGGCTCTaGGACTTGACTTGCCGCACG +
Preference number: 5 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHALGGL*DLTCRT
Trigger: CGTGCGGCAAGTCAAGTCCAAGAGCCCGCCCAGTGC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTATACCATGGAACGTCTaGGCTTTGTGGTATGAAAGG +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVAIPWNV*ALWYER
Trigger: CCTTTCATACCACAAAGCCAAGACGTTCCATGGTAT...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp ACGATGGTGAAGACACAGATCTCCCATTCAGATTGTGCGTGTCCATaGATGAGAAAGCCTCGTCGCAGTTTGTGCCCTGCTCAGCATAGC +
Preference number: 5 (lower is better)
Translates to: TMVKTQISHSDCACP*MRKPRRSLCPAQHS
Trigger: GCTATGCTGAGCAGGGCACAAACTGCGACGAGGCTTTCTCATTCATGGACACGCACAATCTGAATGGGAGATCTGTGTCTTCACCATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000577827.5
ENST00000578093.1
ENST00000580170.6
CDS CCA 90 bp GACTCCAGCAATTTTAACTGTATGGTCTGTCTGTTTCTCGGGTTCTaGGACTGGTTTCGGAGTGGCAGCTCCTTTTGTGGCCACTTGGAC +
Preference number: 5 (lower is better)
Translates to: DSSNFNCMVCLFLGF*DWFRSGSSFCGHLD
Trigger: GTCCAAGTGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000580170.6
CDS CCA 90 bp ACGAACAGCAAGATGCCCGCGATGACTCCAGCAATTTTAACTGTATaGTCTGTCTGTTTCTCGGGTTCTGGGACTGGTTTCGGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: TNSKMPAMTPAILTV*SVCFSGSGTGFGVA
Trigger: TGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTGTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000577827.5
ENST00000580170.6
ENST00000583289.5
CDS CCA 90 bp AGCTCTGAAGAAAATTTAGTCCAAGGGTGCTTGATGAGCAGGGCCTaGTTTGGGAACCTCACTTCTATCTGCATCGCAAAGCACCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSEENLVQGCLMSRA*FGNLTSICIAKHLG
Trigger: CCCCAGGTGCTTTGCGATGCAGATAGAAGTGAGGTTCCCAAACCAGGCCCTGCTCATCAAGCACCCTTGGACTAAATTTTCTTCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578093.1
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGATTACACCATATGTTaGAGTTGGTTCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVADYTIC*SWFSPL
Trigger: CAGTGGAGAGAACCAACTCAAACATATGGTGTAATC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGGCGGGCTCTTGGACTaGACTTGCCGCACGAATCCC +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRGGLLD*TCRTNP
Trigger: GGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGCCATTGTACTCCTCTaGCCACTTGTCCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTAIVLL*PLVHLA
Trigger: CGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGGC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACGGCCTTCCCCGCCATaGTACTCCTCTTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQRPSPP*YSSCHL
Trigger: CAAGTGGCAAGAGGAGTACAATGGCGGGGAAGGCCG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CCAGCTGTCTACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCATATGAAAGGGATTGTTaGCAGAGCTGTTTACACCAT +
Preference number: 5 (lower is better)
Translates to: PAVYAALGSRWQGVRDLAYERDC*QSCLHH
Trigger: ATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATA...TGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTAGACAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp CTTCAAGGCTTGGCAAAAAGACCACTTCCTCACCTCAGCCTTAGCTaGCATGGGCTTCAGCATTGGCCCATTCTCTTGGGTCATGTAACA +
Preference number: 5 (lower is better)
Translates to: LQGLAKRPLPHLSLS*HGLQHWPILLGHVT
Trigger: TGTTACATGACCCAAGAGAATGGGCCAATGCTGAAGCCCATGTCAGCTAAGGCTGAGGTGAGGAAGTGGTCTTTTTGCCAAGCCTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578600.1
CDS CCA 90 bp CCAGAAAGTACTAATGGCCAGTTCTGCCCTGTTCCATGTACGTGTTaGGTCTCCAGATATATTCCAGATAGGATTCCCCAGTGGCCCGTT +
Preference number: 5 (lower is better)
Translates to: PESTNGQFCPVPCTC*VSRYIPDRIPQWPV
Trigger: AACGGGCCACTGGGGAATCCTATCTGGAATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS CCA 90 bp CTCCCCTGGCCTGGTCAGGAGCACACTAATCTCATATTCTGTATCTaGGTCAAGGTGTCCAATTTTATAGCTCGTGGAATCGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: LPWPGQEHTNLIFCI*VKVSNFIARGIDWL
Trigger: CAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS-3UTR CAA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGCCGCGTCTTCTATTTaGGTAGCTGGCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSAASSI*VAGSGE
Trigger: CTCCCCAGAGCCAGCTACCAAAATAGAAGACGCGGC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTTCCCTCGGTTCCGGTaGCTGAGCTCGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLFPRFR*LSSPPL
Trigger: GAGAGGCGGCGAGCTCAGCAACCGGAACCGAGGGAA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGAGTGGCAGCTCCTTTaGTGGCCACTTGGACACAGT +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTEWQLL*WPLGHS
Trigger: ACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCACTC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGGAGTGGCAGCTCCTTTaGTGGCCACTTGGACACAGT +
Preference number: 5 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLEWQLL*WPLGHS
Trigger: ACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCACTC...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAAGCCTCGTCGCAGTTaGTGCCCTGCTCAGCATAGC +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQKPRRS*CPAQHS
Trigger: GCTATGCTGAGCAGGGCACAAACTGCGACGAGGCTT...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGGCGGGCTCTTGGACTaGACTTGCCGCACGAATCCC +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCGGLLD*TCRTNP
Trigger: GGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCCTCTACTCGCAGCGTaGGTGTCACCATGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTPLLAA*VSPCLA
Trigger: CGCTAAACATGGTGACACCAACGCTGCGAGTAGAGG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGCCCAGGAACTGGAATaGCTGCACCATCCGATATCC +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVAQELE*LHHPIS
Trigger: GGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTACTCCTCTTGCCACTaGTCCACCTGGCGAATGAGC +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTYSSCH*STWRMS
Trigger: GCTCATTCGCCAGGTGGACAAGTGGCAAGAGGAGTA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGCCATTGTACTCCTCTaGCCACTTGTCCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQAIVLL*PLVHLA
Trigger: CGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGGC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp AACCAATCGGACCCAATACAAACCACCACACGCACTGCAGCACCATaGAAACTGTGGCTGAAGACCTCTGTCATTCTGATCCTACTCACT +
Preference number: 5 (lower is better)
Translates to: NQSDPIQTTTRTAAP*KLWLKTSVILILLT
Trigger: AGTGAGTAGGATCAGAATGACAGAGGTCTTCAGCCACAGTTTTCATGGTGCTGCAGTGCGTGTGGTGGTTTGTATTGGGTCCGATTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CCA 90 bp AGGAGGAAAGACGGTATCAATTTTAGCCCCACATCATCAAGAGAGTaGAGACAGTTCCTCCAGAGAGAAACACGGTCCAAGGGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: RRKDGINFSPTSSRE*RQFLQRETRSKGSS
Trigger: ACTTGAGCCCTTGGACCGTGTTTCTCTCTGGAGGAACTGTCTCCACTCTCTTGATGATGTGGGGCTAAAATTGATACCGTCTTTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATCCCCATTGATGGAGTaGGCGTTGAGCTGTATCCAC +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVSPLME*ALSCIH
Trigger: GTGGATACAGCTCAACGCCAACTCCATCAATGGGGA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCTGCACTATGAGTTCTaGGCTTTCCTTCCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWALHYEF*AFLPAL
Trigger: GAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCCTGCACTATGAGTTCTaGGCTTTCCTTCCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSLHYEF*AFLPAL
Trigger: GAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAG...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCGTCTCTTTCCGCTTCTaGGCCAGTTTCCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLHSVLIFLSRVPWCRLPVSFRF*ASFLFF
Trigger: GAAGAAAAGGAAACTGGCCAAGAAGCGGAAAGAGAC...GGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAAGCCTCGTCGCAGTTaGTGCCCTGCTCAGCATAGC +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRKPRRS*CPAQHS
Trigger: GCTATGCTGAGCAGGGCACAAACTGCGACGAGGCTT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTAAGCCTCGTCGCAGTTaGTGCCCTGCTCAGCATAGC +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGKPRRS*CPAQHS
Trigger: GCTATGCTGAGCAGGGCACAAACTGCGACGAGGCTT...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTCTTGGACTTGACTaGCCGCACGAATCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRALGLD*PHESQQ
Trigger: CTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAGC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCATACTGCTCCTCTGTTaGCACCATGTTCACCCTCCG +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTILLLC*HHVHPP
Trigger: CGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTAT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGCCCAGGAACTGGAATaGCTGCACCATCCGATATCC +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQAQELE*LHHPIS
Trigger: GGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATACTCCTCTTGCCACTaGTCCACCTGGCGAATGAGC +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQYSSCH*STWRMS
Trigger: GCTCATTCGCCAGGTGGACAAGTGGCAAGAGGAGTA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGCCATTGTACTCCTCTaGCCACTTGTCCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGAIVLL*PLVHLA
Trigger: CGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGGC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCCATTGTACTCCTCTaGCCACTTGTCCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRAIVLL*PLVHLA
Trigger: CGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGGC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCCAAGGAGTACGGGATTaGGCAACTGTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTQGVRD*ATVAVC
Trigger: ACACACAGCCACAGTTGCCAAATCCCGTACTCCTTG...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TACGCTGCTCTAGGAAGCCGGTGGCAAGGAGTACGGGATTTGGCAACTGTGGCTGGGTTTCATCATTTATaGGCACTAAAATTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: YAALGSRWQGVRDLATVAGFHHL*ALKLQL
Trigger: CAACTGCAATTTTAGTGCCAATAAATGATGAAACCC...AGCCACAGTTGCCAAATCCCGTACTCCTTGCCACCGGCTTCCTAGAGCAGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS CCA 90 bp CTCGCTTCTTGTAAGTATGGGACTGCACCAGGCTGCTGGTATCGCTaGCCATTGTGTGGGTTTCATCATTTATTGGCACTAAAATTGCAG +
Preference number: 5 (lower is better)
Translates to: LASCKYGTAPGCWYR*PLCGFHHLLALKLQ
Trigger: CTGCAATTTTAGTGCCAATAAATGATGAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCCATACTTACAAGAAGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCCAGCGGATAGTGATTaGCCGAGATTTGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAPADSD*PRFDLH
Trigger: GTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACCAGCGGATAGTGATTaGCCGAGATTTGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQPADSD*PRFDLH
Trigger: GTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGAGTGGCAGCTCCTTTaGTGGCCACTTGGACACAGT +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCREWQLL*WPLGHS
Trigger: ACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCACTC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGAGTGGCAGCTCCTTTaGTGGCCACTTGGACACAGT +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGEWQLL*WPLGHS
Trigger: ACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCACTC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCCATAGCTCTTGTCCATaGAGTTCACCATCACAGTCA +
Preference number: 5 (lower is better)
Translates to: VLHSVLIFLSRVPWCRLPHSSCP*SSPSQS
Trigger: TGACTGTGATGGTGAACTCAATGGACAAGAGCTATG...GGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTGGTATCGCTGGCCATaGTGTGGGTTTCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAWYRWP*CGFHLG
Trigger: ACCCAGATGAAACCCACACAATGGCCAGCGATACCA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000400053.8
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTGGTATCGCTGGCCATaGTGTGGGTTTCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQWYRWP*CGFHLG
Trigger: ACCCAGATGAAACCCACACAATGGCCAGCGATACCA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000400053.8
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTTGTGTCTCCTTCTATaGTCTGCAGCCTCACTCGGG +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWALCLLL*SAASLG
Trigger: CCCGAGTGAGGCTGCAGACAATAGAAGGAGACACAA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTCATCTGGCCAGTATTaGCAGCATTTGACCCTTCCC +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSSGQY*QHLTLP
Trigger: GGGAAGGGTCAAATGCTGCAAATACTGGCCAGATGA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGCTCTTGGACTTGACTaGCCGCACGAATCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCALGLD*PHESQQ
Trigger: CTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAGC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATACTGCTCCTCTGTTaGCACCATGTTCACCCTCCG +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQILLLC*HHVHPP
Trigger: CGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTAT...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGACCTCTACTCGCAGCGTaGGTGTCACCATGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRPLLAA*VSPCLA
Trigger: CGCTAAACATGGTGACACCAACGCTGCGAGTAGAGG...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTACTCCTCTTGCCACTaGTCCACCTGGCGAATGAGC +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGYSSCH*STWRMS
Trigger: GCTCATTCGCCAGGTGGACAAGTGGCAAGAGGAGTA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCAAGGAGTACGGGATTaGGCAACTGTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQQGVRD*ATVAVC
Trigger: ACACACAGCCACAGTTGCCAAATCCCGTACTCCTTG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCGCTCTAAAATTGCAGTaGGCACAAATGGGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LFFILFSSFLAESHGADCALKLQ*AQMGLG
Trigger: ACCCAGACCCATTTGTGCCAACTGCAATTTTAGAGC...GCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS TCA 90 bp ACCTCACTTCTATCTGCATCGCAAAGCACCTGGGGATGCATGGTATaGAAGGTGGTACACAAGTGTGTAGCTATGTTGCTGTTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: TSLLSASQSTWGCMV*KVVHKCVAMLLLLK
Trigger: TTTCAGCAACAGCAACATAGCTACACACTTGTGTACCACCTTTCATACCATGCATCCCCAGGTGCTTTGCGATGCAGATAGAAGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578093.1
CDS GCA 90 bp CAACGAGTTACATTATATCCAAATGGCTCCCAGCGGATAGTGATTTaGCGAGATTTGACCTCCACTACTTCTAGTTTTCTTGGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: QRVTLYPNGSQRIVI*RDLTSTTSSFLGPR
Trigger: GCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCCAAAGTGCCAACAGTaGCAGAAGTCCGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGPKCQQ*QKSELQ
Trigger: CTGGAGTTCGGACTTCTGCAACTGTTGGCACTTTGG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS-3UTR CAA 90 bp TTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCCCTTGGACACAGTCTATTTaGGTTTCCCCATTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: FFILFSSFLAESHGADCPWTQSI*VSPLAL
Trigger: TAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCA...AGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CAA 90 bp CTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGCTCCTTTTGTGGCCACTaGGACACAGTCTATTTTGGT +
Preference number: 5 (lower is better)
Translates to: LFFILFSSFLAESHGADCSFCGH*DTVYFG
Trigger: ACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGA...GCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGTCTCTTTCCGCTTCTaGGCCAGTTTCCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVVSFRF*ASFLFF
Trigger: GAAGAAAAGGAAACTGGCCAAGAAGCGGAAAGAGAC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGGATCTCCCATTCAGATaGTGCGTGTCCATGAATGAG +
Preference number: 5 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLDLPFR*CVSMNE
Trigger: CTCATTCATGGACACGCACAATCTGAATGGGAGATC...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGATCTCCCATTCAGATaGTGCGTGTCCATGAATGAG +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVDLPFR*CVSMNE
Trigger: CTCATTCATGGACACGCACAATCTGAATGGGAGATC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTTGTGTCTCCTTCTATaGTCTGCAGCCTCACTCGGG +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGLCLLL*SAASLG
Trigger: CCCGAGTGAGGCTGCAGACAATAGAAGGAGACACAA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTCATCTGGCCAGTATTaGCAGCATTTGACCCTTCCC +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWASSGQY*QHLTLP
Trigger: GGGAAGGGTCAAATGCTGCAAATACTGGCCAGATGA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGCTCTTGGACTTGACTaGCCGCACGAATCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLALGLD*PHESQQ
Trigger: CTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAGC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCATACAGAGACCTAACTaGGGAAGCAGGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSIQRPN*GSRHRG
Trigger: ACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTAT...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGCCCAGGAACTGGAATaGCTGCACCATCCGATATCC +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCAQELE*LHHPIS
Trigger: GGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCAAGGAGTACGGGATTaGGCAACTGTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGQGVRD*ATVAVC
Trigger: ACACACAGCCACAGTTGCCAAATCCCGTACTCCTTG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp GTCAAGGTGTTCACTTGCTCCCAATTGAAGTCATCACCTTCAGATTaGCTATATCCACATGTGCTATACGGCTCATCAAAGAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: VKVFTCSQLKSSPSD*LYPHVLYGSSKRQP
Trigger: TGGCTGCCTCTTTGATGAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp GGCAATAGGAACGGGTGGTTCTTTAACTACCAACTCTGCATAGTTTaGTATTCCAACACCTCCTTCAGTGCGAATCATGCAGCGGTACTT +
Preference number: 5 (lower is better)
Translates to: GNRNGWFFNYQLCIV*YSNTSFSANHAAVL
Trigger: AAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS TCA 90 bp TTCACACTGACATTGGTGTATGGTGACAGGTTAGTGATCGTGTGTTaGGGGTGTGAGTTTTCTGTATCCCAGCTTACTTCTTCTCGCACT +
Preference number: 5 (lower is better)
Translates to: FTLTLVYGDRLVIVC*GCEFSVSQLTSSRT
Trigger: AGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCACCATACACCAATGTCAGTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS TCA 90 bp TCAAGTGCTAGGAGACTGGGGTGCAATGCCAAATATTACACAGATTaGTTAAAACCAATCGGACCCAATACAAACCACCACACGCACTGC +
Preference number: 5 (lower is better)
Translates to: SSARRLGCNAKYYTD*LKPIGPNTNHHTHC
Trigger: GCAGTGCGTGTGGTGGTTTGTATTGGGTCCGATTGGTTTTAATCAATCTGTGTAATATTTGGCATTGCACCCCAGTCTCCTAGCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS TCA 90 bp TGTACTTCCCAAGCACAGTTCCCTATTTACGTCCCAGGTTTTCCATaGATGCTTGGTGGATGTAGTGCAGAGACCTTTGAGCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: CTSQAQFPIYVPGFP*MLGGCSAETFELQS
Trigger: ACTTTGTAGCTCAAAGGTCTCTGCACTACATCCACCAAGCATTCATGGAAAACCTGGGACGTAAATAGGGAACTGTGCTTGGGAAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578600.1
CDS GCA 90 bp CTTCCCAAGCACAGTTCCCTATTTACGTCCCAGGTTTTCCATGAATaGTTGGTGGATGTAGTGCAGAGACCTTTGAGCTACAAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LPKHSSLFTSQVFHE*LVDVVQRPLSYKVL
Trigger: AAGAACTTTGTAGCTCAAAGGTCTCTGCACTACATCCACCAAGCATTCATGGAAAACCTGGGACGTAAATAGGGAACTGTGCTTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578600.1
CDS CCA 90 bp CTCTCCACTGAAGAAATATCTTCTCTTCAAAGGTACTTCCTTGTATaGATTCAGTGGGAACAGCACCTGGGAGGTCTTCATCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LSTEEISSLQRYFLV*IQWEQHLGGLHLSA
Trigger: TGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578698.1
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCAGTCAAGGTGTTCACTaGCTCCCAATTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSQGVH*LPIEVI
Trigger: GATGACTTCAATTGGGAGCAAGTGAACACCTTGACT...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGATAGCGAGATAGCCTaGATGTCCAGAAGTTATCAC +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVDSEIA*MSRSYH
Trigger: GTGATAACTTCTGGACATCAAGGCTATCTCGCTATC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGTGATTTGCCGAGATTaGACCTCCACTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTVICRD*TSTTSS
Trigger: ACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCAC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGTGATTTGCCGAGATTaGACCTCCACTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVVICRD*TSTTSS
Trigger: ACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCAC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATTCTTGTCCTCCAACTaGGTAACAGTAGTGGACAGT +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVFLSSN*VTVVDS
Trigger: ACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTTCTCGCACTTGTTCTaGTCCTCCAACTTGGTAACA +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTFSHLF*SSNLVT
Trigger: TGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTACTTCTTCTCGCACTaGTTCTTGTCCTCCAACTTG +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTYFFSH*FLSSNL
Trigger: CAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCTGCACTATGAGTTCTaGGCTTTCCTTCCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLLHYEF*AFLPAL
Trigger: GAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTAGAGGGTGCTGATATTTaGGTGGTGAACTGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVEGADI*VVNWFV
Trigger: AACAAACCAGTTCACCACCAAAATATCAGCACCCTC...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTCCTTTTGTGGCCACTaGGACACAGTCTATTTTGGT +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTSFCGH*DTVYFG
Trigger: ACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGTCTCTTTCCGCTTCTaGGCCAGTTTCCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQVSFRF*ASFLFF
Trigger: GAAGAAAAGGAAACTGGCCAAGAAGCGGAAAGAGAC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGTGTCTCCTTCTATaGTCTGCAGCCTCACTCGGG +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCLCLLL*SAASLG
Trigger: CCCGAGTGAGGCTGCAGACAATAGAAGGAGACACAA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATTCCTGCATTGGCCCTaGGGTAGCAATGTAATGATT +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVFLHWP*GSNVMI
Trigger: AATCATTACATTGCTACCCAAGGGCCAATGCAGGAA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACCCACTTCCACAAGATaGGTCACCATGATGATACTT +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVPTSTR*VTMMIL
Trigger: AAGTATCATCATGGTGACCAATCTTGTGGAAGTGGG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGCAGTATTTGCAGCATTaGACCCTTCCCACTTCCACA +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQQYLQH*TLPTST
Trigger: TGTGGAAGTGGGAAGGGTCAAATGCTGCAAATACTG...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACAGTATTTGCAGCATTaGACCCTTCCCACTTCCACA +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQQYLQH*TLPTST
Trigger: TGTGGAAGTGGGAAGGGTCAAATGCTGCAAATACTG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTATACTGCTCCTCTGTTaGCACCATGTTCACCCTCCG +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCILLLC*HHVHPP
Trigger: CGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTAT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATGGAACGTCTTGGCTTaGTGGTATGAAAGGGATTGT +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVWNVLA*WYERDC
Trigger: ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGCAGCATTACTGGGATaGGGCAGTGCAAGCAATTTT +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQAALLG*GSASNF
Trigger: AAAATTGCTTGCACTGCCCAATCCCAGTAATGCTGC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTGGTATCGCTGGCCATaGTGTGGGTTTCATCATTTA +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTWYRWP*CGFHHL
Trigger: TAAATGATGAAACCCACACAATGGCCAGCGATACCA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS GCA 90 bp ACTCTGCATAGTTTGATATTCCAACACCTCCTTCAGTGCGAATCATaGAGCGGTACTTTCCAGCATCTCGTTTGGTGGTATTCACAACAT +
Preference number: 5 (lower is better)
Translates to: TLHSLIFQHLLQCES*SGTFQHLVWWYSQH
Trigger: ATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTATGCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS CCA 90 bp GACAGTGAGATTATAACTGTGGCAACGAGTTACATTATATCCAAATaGCTCCCAGCGGATAGTGATTTGCCGAGATTTGACCTCCACTAC +
Preference number: 5 (lower is better)
Translates to: DSEIITVATSYIISK*LPADSDLPRFDLHY
Trigger: GTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGTCATCACCTTCAGATaGACTATATCCACATGTGCT +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTVITFR*TISTCA
Trigger: AGCACATGTGGATATAGTCAATCTGAAGGTGATGAC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATTCACTTGCTCCCAATaGAAGTCATCACCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVFTCSQ*KSSPSD
Trigger: ATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGATAGCGAGATAGCCTaGATGTCCAGAAGTTATCAC +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQDSEIA*MSRSYH
Trigger: GTGATAACTTCTGGACATCAAGGCTATCTCGCTATC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGATAGCGAGATAGCCTaGATGTCCAGAAGTTATCAC +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQDSEIA*MSRSYH
Trigger: GTGATAACTTCTGGACATCAAGGCTATCTCGCTATC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCTACTTCTAGTTTTCTaGGGCCTCGCATGGGATCAG +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCLLLVF*GLAWDQ
Trigger: CTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGTGATTTGCCGAGATTaGACCTCCACTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSVICRD*TSTTSS
Trigger: ACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCAC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCCAGCGGATAGTGATTaGCCGAGATTTGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLPADSD*PRFDLH
Trigger: GTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCTTCTCGCACTTGTTCTaGTCCTCCAACTTGGTAACA +
Preference number: 5 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSFSHLF*SSNLVT
Trigger: TGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAA...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTTCTCGCACTTGTTCTaGTCCTCCAACTTGGTAACA +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAFSHLF*SSNLVT
Trigger: TGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTACTTCTTCTCGCACTaGTTCTTGTCCTCCAACTTG +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQYFFSH*FLSSNL
Trigger: CAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTATTCAAAGGTACTTCCTaGTATGGATTCAGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVFKGTS*YGFSGN
Trigger: GTTCCCACTGAATCCATACAAGGAAGTACCTTTGAA...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp AAGAATATAGTTGTGCTCTTCAGTTTACCAGCTGTCTACGCTGCTCTAGGAAGCGAGGGTGCTGATATTTaGGTGGTGAACTGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: KNIVVLFSLPAVYAALGSEGADI*VVNWFV
Trigger: AACAAACCAGTTCACCACCAAAATATCAGCACCCTC...GCTTCCTAGAGCAGCGTAGACAGCTGGTAAACTGAAGAGCACAACTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACACGGTATTGTCAGTTaGATTCAAAGGTGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: LSCNNNEGHGPQNNTPKVHGIVS*IQRCLK
Trigger: CTTGAGACACCTTTGAATCAAACTGACAATACCGTG...TACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTGTTCTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTGGGCTCTACTAGCAGCTaGGAAATAAATTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: SVLHSVLIFLSRVPWCRLGSTSS*EINSVA
Trigger: AGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCC...CAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAGAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577468.2
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCGGCTCTACTAGCAGCTaGGAAATAAATTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTGSTSS*EINSVA
Trigger: AGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCC...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATGGACACAGTCTATTTaGGTTTCCCCATTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQWTQSI*VSPLAL
Trigger: TAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGTCTCTTTCCGCTTCTaGGCCAGTTTCCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRVSFRF*ASFLFF
Trigger: GAAGAAAAGGAAACTGGCCAAGAAGCGGAAAGAGAC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACATAGCTCTTGTCCATaGAGTTCACCATCACAGTCA +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQHSSCP*SSPSQS
Trigger: TGACTGTGATGGTGAACTCAATGGACAAGAGCTATG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGATCTCCCATTCAGATaGTGCGTGTCCATGAATGAG +
Preference number: 5 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHDLPFR*CVSMNE
Trigger: CTCATTCATGGACACGCACAATCTGAATGGGAGATC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTCATCTGGCCAGTATTaGCAGCATTTGACCCTTCCC +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSSGQY*QHLTLP
Trigger: GGGAAGGGTCAAATGCTGCAAATACTGGCCAGATGA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTATACTGCTCCTCTGTTaGCACCATGTTCACCCTCCG +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLILLLC*HHVHPP
Trigger: CGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTAT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGCACTAAAATTGCAGTaGGCACAAATGGGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGALKLQ*AQMGLG
Trigger: ACCCAGACCCATTTGTGCCAACTGCAATTTTAGTGC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTGGTATCGCTGGCCATaGTGTGGGTTTCATCATTTA +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAWYRWP*CGFHHL
Trigger: TAAATGATGAAACCCACACAATGGCCAGCGATACCA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS GCA 90 bp AAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTaGAGAGCTGTTTACACCATCAGCCAGAATTCAAGTATTCCAGGG +
Preference number: 5 (lower is better)
Translates to: KYHGTSWLCGMKGIV*RAVYTISQNSSIPG
Trigger: CCCTGGAATACTTGAATTCTGGCTGATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000580949.1
CDS CCA 90 bp GTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTaGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: VFISFAQIPWNVLAL*YERDCLQSCLHHQP
Trigger: TGGCTGATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000580949.1
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGTCATCACCTTCAGATaGACTATATCCACATGTGCT +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQVITFR*TISTCA
Trigger: AGCACATGTGGATATAGTCAATCTGAAGGTGATGAC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTTCACTTGCTCCCAATaGAAGTCATCACCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAFTCSQ*KSSPSD
Trigger: ATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAGTCAAGGTGTTCACTaGCTCCCAATTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRSQGVH*LPIEVI
Trigger: GATGACTTCAATTGGGAGCAAGTGAACACCTTGACT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGATAGCGAGATAGCCTaGATGTCCAGAAGTTATCAC +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRDSEIA*MSRSYH
Trigger: GTGATAACTTCTGGACATCAAGGCTATCTCGCTATC...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCTTTCCAGCATCTCGTTaGGTGGTATTCACAACATTA +
Preference number: 5 (lower is better)
Translates to: GTSWLCGMKGIVCRAVYTFPASR*VVFTTL
Trigger: TAATGTTGTGAATACCACCAAACGAGATGCTGGAAA...GGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCTACTTCTAGTTTTCTaGGGCCTCGCATGGGATCAG +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLLLLVF*GLAWDQ
Trigger: CTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTGTGATTTGCCGAGATTaGACCTCCACTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGVICRD*TSTTSS
Trigger: ACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCAC...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGATACTTCTTCTCGCACTaGTTCTTGTCCTCCAACTTG +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRYFFSH*FLSSNL
Trigger: CAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTA...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTTCAAAGGTACTTCCTaGTATGGATTCAGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQFKGTS*YGFSGN
Trigger: GTTCCCACTGAATCCATACAAGGAAGTACCTTTGAA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATTCAAAGGTACTTCCTaGTATGGATTCAGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQFKGTS*YGFSGN
Trigger: GTTCCCACTGAATCCATACAAGGAAGTACCTTTGAA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAAGATTACACCATATGTTaGAGTTGGTTCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQDYTIC*SWFSPL
Trigger: CAGTGGAGAGAACCAACTCAAACATATGGTGTAATC...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGAGGGTGCTGATATTTaGGTGGTGAACTGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHEGADI*VVNWFV
Trigger: AACAAACCAGTTCACCACCAAAATATCAGCACCCTC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAACACGGTATTGTCAGTTaGATTCAAAGGTGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQHGIVS*IQRCLK
Trigger: CTTGAGACACCTTTGAATCAAACTGACAATACCGTG...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTCACGGTATTGTCAGTTaGATTCAAAGGTGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAHGIVS*IQRCLK
Trigger: CTTGAGACACCTTTGAATCAAACTGACAATACCGTG...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGTTCCTCAACAACTATTaGATAGACACTGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQFLNNY*IDTDRC
Trigger: GCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAA...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGGGCTCTACTAGCAGCTaGGAAATAAATTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: AQIPWNVLALWYERDCLQGSTSS*EINSVA
Trigger: AGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCC...CTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTCCTTTTGTGGCCACTaGGACACAGTCTATTTTGGT +
Preference number: 5 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHSFCGH*DTVYFG
Trigger: ACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATCATAGCTCTTGTCCATaGAGTTCACCATCACAGTCA +
Preference number: 5 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHHSSCP*SSPSQS
Trigger: TGACTGTGATGGTGAACTCAATGGACAAGAGCTATG...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTTCCTGCATTGGCCCTaGGGTAGCAATGTAATGATT +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGFLHWP*GSNVMI
Trigger: AATCATTACATTGCTACCCAAGGGCCAATGCAGGAA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCAGTATTTGCAGCATTaGACCCTTCCCACTTCCACA +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCQYLQH*TLPTST
Trigger: TGTGGAAGTGGGAAGGGTCAAATGCTGCAAATACTG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTATACAGAGACCTAACTaGGGAAGCAGGCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLIQRPN*GSRHRG
Trigger: ACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTAT...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAATACCATGGAACGTCTaGGCTTTGTGGTATGAAAGG +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRIPWNV*ALWYER
Trigger: CCTTTCATACCACAAAGCCAAGACGTTCCATGGTAT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 90 bp CTCGCACTTGTTCTTGTCCTCCAACTTGGTAACAGTAGTGGACAGTaGGATTATAACTGTGGCAACGAGTTACATTATATCCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: LALVLVLQLGNSSGQ*DYNCGNELHYIQMA
Trigger: AGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAACAAGTGCGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS TCA 90 bp ATTGGGTCGATGATAACCATCGATATAATTGCCATTGATATAGTCTaGGTTTGTGTCTCCTTCTATTGTCTGCAGCCTCACTCGGGAATG +
Preference number: 5 (lower is better)
Translates to: IGSMITIDIIAIDIV*VCVSFYCLQPHSGM
Trigger: CATTCCCGAGTGAGGCTGCAGACAATAGAAGGAGACACAAACTCAGACTATATCAATGGCAATTATATCGATGGTTATCATCGACCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS TCA 90 bp CATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATaGAAGGGATTGTTTGCAGAGCTGTTTACACCATCAGCCAGAATT +
Preference number: 5 (lower is better)
Translates to: HLFCTNTMERLGFVV*KGLFAELFTPSARI
Trigger: AATTCTGGCTGATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000580949.1
CDS-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGTCATCACCTTCAGATaGACTATATCCACATGTGCT +
Preference number: 5 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHVITFR*TISTCA
Trigger: AGCACATGTGGATATAGTCAATCTGAAGGTGATGAC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTAGTCAAGGTGTTCACTaGCTCCCAATTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSQGVH*LPIEVI
Trigger: GATGACTTCAATTGGGAGCAAGTGAACACCTTGACT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTTTCCAGCATCTCGTTaGGTGGTATTCACAACATTA +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAFPASR*VVFTTL
Trigger: TAATGTTGTGAATACCACCAAACGAGATGCTGGAAA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTCTCGCACTTGTTCTaGTCCTCCAACTTGGTAACA +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCFSHLF*SSNLVT
Trigger: TGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTTTCCTCAACAACTATTaGATAGACACTGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGFLNNY*IDTDRC
Trigger: GCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAA...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATTTCCTCAACAACTATTaGATAGACACTGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHFLNNY*IDTDRC
Trigger: GCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAA...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATAACGAGGGTCACGGGCCACAAAATAATACCCCAAAGGTACAAATTCCTTCATGGCTCTACTAGCAGCTaGGAAATAAATTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: ITRVTGHKIIPQRYKFLHGSTSS*EINSVA
Trigger: AGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCC...ATGAAGGAATTTGTACCTTTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTGGACACAGTCTATTTaGGTTTCCCCATTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCWTQSI*VSPLAL
Trigger: TAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTCCTTTTGTGGCCACTaGGACACAGTCTATTTTGGT +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCSFCGH*DTVYFG
Trigger: ACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGATCTCCCATTCAGATaGTGCGTGTCCATGAATGAG +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLDLPFR*CVSMNE
Trigger: CTCATTCATGGACACGCACAATCTGAATGGGAGATC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTCCTGCATTGGCCCTaGGGTAGCAATGTAATGATT +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCFLHWP*GSNVMI
Trigger: AATCATTACATTGCTACCCAAGGGCCAATGCAGGAA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp ATACACTCAGCTGTAACAATAACGAGGGTCACGGGCCACAAAATAATACCCCAATATGAAAGGGATTGTTaGCAGAGCTGTTTACACCAT +
Preference number: 5 (lower is better)
Translates to: IHSAVTITRVTGHKIIPQYERDC*QSCLHH
Trigger: ATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATA...TTGGGGTATTATTTTGTGGCCCGTGACCCTCGTTATTGTTACAGCTGAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CAGCATTACTGGGATTGGGCAGTGCAAGCAATTTTAGAAACACTTTCTTGGGCTTATGAAAGGGATTGTTaGCAGAGCTGTTTACACCAT +
Preference number: 5 (lower is better)
Translates to: QHYWDWAVQAILETLSWAYERDC*QSCLHH
Trigger: ATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATA...AGCCCAAGAAAGTGTTTCTAAAATTGCTTGCACTGCCCAATCCCAGTAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTATACCATGGAACGTCTaGGCTTTGTGGTATGAAAGG +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCIPWNV*ALWYER
Trigger: CCTTTCATACCACAAAGCCAAGACGTTCCATGGTAT...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTGCAGCATTACTGGGATaGGGCAGTGCAAGCAATTTT +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLAALLG*GSASNF
Trigger: AAAATTGCTTGCACTGCCCAATCCCAGTAATGCTGC...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTTCTTGTCCTCCAACTaGGTAACAGTAGTGGACAGT +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLFLSSN*VTVVDS
Trigger: ACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTCAAAGGTACTTCCTaGTATGGATTCAGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCFKGTS*YGFSGN
Trigger: GTTCCCACTGAATCCATACAAGGAAGTACCTTTGAA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTCCTCAACAACTATTaGATAGACACTGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCFLNNY*IDTDRC
Trigger: GCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTGCAGAAAGTCTTCATCTCTTTaGCACAAATACCATGGAACG +
Preference number: 5 (lower is better)
Translates to: HKYHGTSWLCGMKGIVCRKSSSL*HKYHGT
Trigger: CGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTT...TCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp GAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTCCAATAGAGCCTACTTaGAATCTTTCCAGTTCATCT +
Preference number: 5 (lower is better)
Translates to: EKSSSLLHKYHGTSWLCGPIEPT*NLSSSS
Trigger: AGATGAACTGGAAAGATTCAAAGTAGGCTCTATTGG...ACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400053.8
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTTCACTTGCTCCCAATaGAAGTCATCACCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLFTCSQ*KSSPSD
Trigger: ATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTTCCAGCATCTCGTTaGGTGGTATTCACAACATTA +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCFPASR*VVFTTL
Trigger: TAATGTTGTGAATACCACCAAACGAGATGCTGGAAA...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTCACGGTATTGTCAGTTaGATTCAAAGGTGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLHGIVS*IQRCLK
Trigger: CTTGAGACACCTTTGAATCAAACTGACAATACCGTG...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTCAGGCAGTCTCTGGTTaGTCTGTGTTTTTAATGATA +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCQAVSG*SVFLMI
Trigger: TATCATTAAAAACACAGACAAACCAGAGACTGCCTG...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400053.8
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTTTCCAGCATCTCGTTaGGTGGTATTCACAACATTA +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLFPASR*VVFTTL
Trigger: TAATGTTGTGAATACCACCAAACGAGATGCTGGAAA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp CATATTGAGAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTTATGAAAGGGATTGTTaGCAGAGCTGTTTACACCAT +
Preference number: 5 (lower is better)
Translates to: HIEKSSSLLHKYHGTSWLYERDC*QSCLHH
Trigger: ATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATA...AAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTCTCAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS-3UTR CAA 90 bp TCTTTTGCACAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTGGGTTTCATCATTTATaGGCACTAAAATTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: SFAQIPWNVLALWYERDCGFHHL*ALKLQL
Trigger: CAACTGCAATTTTAGTGCCAATAAATGATGAAACCC...ACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS TCA 72 bp GCTCCCCGACTGACTGGCGGTGCCCCGCAGGCCGGCTaGAGGGAGCGCTCACGTCACGGCCGCCCGGCGCCG +
Preference number: 6 (lower is better)
Translates to: APRLTGGAPQAG*RERSRHGRPAP
Trigger: CGGCGCCGGGCGGCCGTGACGTGAGCGCTCCCTTCAGCCGGCCTGCGGGGCACCGCCAGTCAGTCGGGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS CCA 72 bp TGCGACCCCGCGGGCGCGGCCAGGCGGCTTCGAGCCTaGCGCCGGACGGCGATGTCACCGCACAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: CDPAGAARRLRA*RRTAMSPHRAS
Trigger: GCTGGCCCTGTGCGGTGACATCGCCGTCCGGCGCCAGGCTCGAAGCCGCCTGGCCGCGCCCGCGGGGTCGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS GCA 72 bp TGGCGCCGGACGGCGATGTCACCGCACAGGGCCAGCTaGACCCGGAGTCGCCGGGCCTGCGCTGCTCGGCGG +
Preference number: 6 (lower is better)
Translates to: WRRTAMSPHRAS*TRSRRACAARR
Trigger: CCGCCGAGCAGCGCAGGCCCGGCGACTCCGGGTGCAGCTGGCCCTGTGCGGTGACATCGCCGTCCGGCGCCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS CCA 72 bp CCCCTGTCCCTGGCCCCACTCGGCGTCTGGCGCCGCTaGCAGAGGGAGCGGAGGGCGAGCCCGCGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: PLSLAPLGVWRR*QRERRASPRSQ
Trigger: TTGGCTCCGCGGGCTCGCCCTCCGCTCCCTCTGCCAGCGGCGCCAGACGCCGAGTGGGGCCAGGGACAGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS GCA 72 bp TGCGCGCGGGGCTCTTGCTCCCCGACTGACTGGCGGTaGCCCGCAGGCCGGCTGAAGGGAGCGCTCACGTCA +
Preference number: 6 (lower is better)
Translates to: CARGSCSPTDWR*PAGRLKGALTS
Trigger: TGACGTGAGCGCTCCCTTCAGCCGGCCTGCGGGGCACCGCCAGTCAGTCGGGGAGCAAGAGCCCCGCGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS CCA 72 bp GGGTGGGCGCGCGAGGGCGGAGGGGGCCGGGAGCTTTaGTTCCGAGGCAGCGAGGAGAGACGGGTAAACAGC +
Preference number: 6 (lower is better)
Translates to: GWAREGGGGREL*FRGSEERRVNS
Trigger: GCTGTTTACCCGTCTCTCCTCGCTGCCTCGGAACCAAAGCTCCCGGCCCCCTCCGCCCTCGCGCGCCCACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS TCA 72 bp GAAGTTTGTCCCGGGTCACGAGCCGCGAGTAGTTTGTaGGCGCGGCCGGGCGGGACCAGCGGCCTGCGACCC +
Preference number: 6 (lower is better)
Translates to: EVCPGSRAASSL*ARPGGTSGLRP
Trigger: GGGTCGCAGGCCGCTGGTCCCGCCCGGCCGCGCTCACAAACTACTCGCGGCTCGTGACCCGGGACAAACTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS TCA 72 bp CTCGGCGGCTGCGGGAAAAGCGAGCCAGGAGATCGCTaGGGCTCCGGAGGGCTGCGAGCTTCTCTACGCCGC +
Preference number: 6 (lower is better)
Translates to: LGGCGKSEPGDR*GSGGLRASLRR
Trigger: GCGGCGTAGAGAAGCTCGCAGCCCTCCGGAGCCTCAGCGATCTCCTGGCTCGCTTTTCCCGCAGCCGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS CAA 90 bp CCAGCACTGCAGTGCACCACCAGTGGGCCTGCACTGGGCGGGCTCTaGGACTTGACTTGCCGCACGAATCCCAGCAGGCCGGTGGCATGG +
Preference number: 6 (lower is better)
Translates to: PALQCTTSGPALGGL*DLTCRTNPSRPVAW
Trigger: CCATGCCACCGGCCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCCCAGTGCAGGCCCACTGGTGGTGCACTGCAGTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000583153.2
CDS TCA 72 bp CCACCAGTGGGCCTGCACTGGGCGGGCTCTTGGACTTaGCTTGCCGCACGAATCCCAGCAGGCCGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: PPVGLHWAGSWT*LAARIPAGRWH
Trigger: ATGCCACCGGCCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCCCAGTGCAGGCCCACTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000583153.2
CDS GCA 72 bp GTAGCTGGCTCTGGGGAGGGTGACTGTGGAAGAGGCTaGGCCGCCGCCAGAAGTTTGTCCCGGGTCACGAGC +
Preference number: 6 (lower is better)
Translates to: VAGSGEGDCGRG*AAARSLSRVTS
Trigger: GCTCGTGACCCGGGACAAACTTCTGGCGGCGGCGCAGCCTCTTCCACAGTCACCCTCCCCAGAGCCAGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS CAA 72 bp ACCACCAGTGGGCCTGCACTGGGCGGGCTCTTGGACTaGACTTGCCGCACGAATCCCAGCAGGCCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: TTSGPALGGLLD*TCRTNPSRPVA
Trigger: TGCCACCGGCCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCCCAGTGCAGGCCCACTGGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000583153.2
CDS CAA 72 bp CAGTGCACCACCAGTGGGCCTGCACTGGGCGGGCTCTaGGACTTGACTTGCCGCACGAATCCCAGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: QCTTSGPALGGL*DLTCRTNPSRP
Trigger: CGGCCTGCTGGGATTCGTGCGGCAAGTCAAGTCCAAGAGCCCGCCCAGTGCAGGCCCACTGGTGGTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000583153.2
CDS GCA 72 bp CGACTGGCTGCCGGTCATTCCAGCTCCCACTGGCCGTaGAGTACTCCACCTCTCGGGCCACAATGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: RLAAGHSSSHWP*STPPLGPQWAH
Trigger: ATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS GCA 72 bp CAGAGCGCTAAGCCAAGCCCCCAAAGTGCCAACAGTTaGAGAAGTCCGAACTCCAGCGGCTCCAGGGGCGCG +
Preference number: 6 (lower is better)
Translates to: QSAKPSPQSANS*RSPNSSGSRGA
Trigger: CGCGCCCCTGGAGCCGCTGGAGTTCGGACTTCTGCAACTGTTGGCACTTTGGGGGCTTGGCTTAGCGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332175.12
ENST00000580170.6
CDS GCA 72 bp CACTGCGGCCTCCCCCGTTCAAGCAGTGCACAACCGTaGGGCCTTCCCCGCCATTGTACTCCTCTTGCCACT +
Preference number: 6 (lower is better)
Translates to: HCGLPRSSSAQP*GLPRHCTPLAT
Trigger: AGTGGCAAGAGGAGTACAATGGCGGGGAAGGCCGCACGGTTGTGCACTGCTTGAACGGGGGAGGCCGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS CCA 72 bp TGGAATCGACTGGCTGCCGGTCATTCCAGCTCCCACTaGCCGTGCAGTACTCCACCTCTCGGGCCACAATGG +
Preference number: 6 (lower is better)
Translates to: WNRLAAGHSSSH*PCSTPPLGPQW
Trigger: CCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS TCA 72 bp CGCGTCTTCTATTTTGGTAGCTGGCTCTGGGGAGGGTaGCTGTGGAAGAGGCTGCGCCGCCGCCAGAAGTTT +
Preference number: 6 (lower is better)
Translates to: RVFYFGSWLWGG*LWKRLRRRQKF
Trigger: AAACTTCTGGCGGCGGCGCAGCCTCTTCCACAGTCACCCTCCCCAGAGCCAGCTACCAAAATAGAAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332175.12
CDS GCA 72 bp TCCCTGTACATCGGCCAGCCCAGGAACTGGAATTGCTaGACCATCCGATATCCATCTTGGGGTCTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: SLYIGQPRNWNC*TIRYPSWGLAA
Trigger: TGCCGCCAGACCCCAAGATGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCCGATGTACAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS GCA 72 bp GTGTCCCTGTACATCGGCCAGCCCAGGAACTGGAATTaGTGCACCATCCGATATCCATCTTGGGGTCTGGCG +
Preference number: 6 (lower is better)
Translates to: VSLYIGQPRNWN*CTIRYPSWGLA
Trigger: CGCCAGACCCCAAGATGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCCGATGTACAGGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS CCA 72 bp TCCTTCAGAGGAGCATCTCGCACATCAATGCCAGGATaGAGGGAGAGGGTTCCCATAGGCAGTCAGCTCCCC +
Preference number: 6 (lower is better)
Translates to: SFRGASRTSMPG*RERVPIGSQLP
Trigger: GGGGAGCTGACTGCCTATGGGAACCCTCTCCCTCCATCCTGGCATTGATGTGCGAGATGCTCCTCTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578916.2
CDS TCA 72 bp CGGGAGTACCTCTGTTTGCACCATGTTCACCCTCCGTaGCCGCAGCTCCCTGACGCAGTTGTAGATGTCTAC +
Preference number: 6 (lower is better)
Translates to: REYLCLHHVHPP*PQLPDAVVDVY
Trigger: GTAGACATCTACAACTGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATGGTGCAAACAGAGGTACTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CCA 72 bp CTGTCTCCTGCCACGGTCCTGCCGATGGCACTGCACTaGAAGGTAGCAAACTGGCCAGCATTAACTTCCACA +
Preference number: 6 (lower is better)
Translates to: LSPATVLPMALH*KVANWPALTST
Trigger: TGTGGAAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS CCA 72 bp CTGGCGAATGAGCTTCAAGAAGGAGCGCTTAGACACTaGTGTGTCCCTGTACATCGGCCAGCCCAGGAACTG +
Preference number: 6 (lower is better)
Translates to: LANELQEGALRH*CVPVHRPAQEL
Trigger: CAGTTCCTGGGCTGGCCGATGTACAGGGACACACCAGTGTCTAAGCGCTCCTTCTTGAAGCTCATTCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS TCA 72 bp TTTGCACCATGTTCACCCTCCGTGACCGCAGCTCCCTaGCGCAGTTGTAGATGTCTACGACCCCTTCCCTTT +
Preference number: 6 (lower is better)
Translates to: FAPCSPSVTAAP*RSCRCLRPLPF
Trigger: AAAGGGAAGGGGTCGTAGACATCTACAACTGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATGGTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000583153.2
CDS TCA 72 bp ATGGTAAGATTAGAGAAGCATGCTCCGGCAGGAGCCTaGAGAGGAGACACGCACAGGATTGGGCCACAGCAC +
Preference number: 6 (lower is better)
Translates to: MVRLEKHAPAGA*RGDTHRIGPQH
Trigger: GTGCTGTGGCCCAATCCTGTGCGTGTCTCCTCTTCAGGCTCCTGCCGGAGCATGCTTCTCTAATCTTACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400053.8
CDS CCA 72 bp ACTGGTGTGTCCCTGTACATCGGCCAGCCCAGGAACTaGAATTGCTGCACCATCCGATATCCATCTTGGGGT +
Preference number: 6 (lower is better)
Translates to: TGVSLYIGQPRN*NCCTIRYPSWG
Trigger: ACCCCAAGATGGATATCGGATGGTGCAGCAATTCCAGTTCCTGGGCTGGCCGATGTACAGGGACACACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS TCA 72 bp ATACTGCTCCTCTGTTTGCACCATGTTCACCCTCCGTaGCCGCAGCTCCCTGACGCAGTTGTAGATGTCTAC +
Preference number: 6 (lower is better)
Translates to: ILLLCLHHVHPP*PQLPDAVVDVY
Trigger: GTAGACATCTACAACTGCGTCAGGGAGCTGCGGTCACGGAGGGTGAACATGGTGCAAACAGAGGAGCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
ENST00000583153.2
CDS GCA 72 bp TTTTCTTTAAGTTGGGGTAAGAGCAGGTGGGCTCTCTaGCCCTCAGGTCTCCCAGAGGCATTCACCAGCATG +
Preference number: 6 (lower is better)
Translates to: FSLSWGKSRWAL*PSGLPEAFTSM
Trigger: CATGCTGGTGAATGCCTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS GCA 72 bp TCAGTGGGAACAGCACCTGGGAGGTCTTCATCTGTCTaGACTATGAGTTCTTGGCTTTCCTTCCGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: SVGTAPGRSSSV*TMSSWLSFRPS
Trigger: AGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578698.1
ENST00000580170.6
CDS CCA 72 bp CCTGGGAGGTCTTCATCTGTCTGCACTATGAGTTCTTaGCTTTCCTTCCGGCCCTCTGGGTTCATGAGGATC +
Preference number: 6 (lower is better)
Translates to: PGRSSSVCTMSS*LSFRPSGFMRI
Trigger: GATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578698.1
ENST00000580170.6
CDS CCA 72 bp ATGTCCTCTTCCAGGTCAGCAGAGACAAATTCCACCTaGATGGGGCCGTGTCTGTGTACTCCGTTTTCTGGC +
Preference number: 6 (lower is better)
Translates to: MSSSRSAETNST*MGPCLCTPFSG
Trigger: GCCAGAAAACGGAGTACACAGACACGGCCCCATCCAGGTGGAATTTGTCTCTGCTGACCTGGAAGAGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS CCA 72 bp TCCCCGCCATTGTACTCCTCTTGCCACTTGTCCACCTaGCGAATGAGCTTCAAGAAGGAGCGCTTAGACACT +
Preference number: 6 (lower is better)
Translates to: SPPLYSSCHLST*RMSFKKERLDT
Trigger: AGTGTCTAAGCGCTCCTTCTTGAAGCTCATTCGCCAGGTGGACAAGTGGCAAGAGGAGTACAATGGCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS CAA 72 bp CACCTCTCTGTGACACTTCTCTGGATGGACTGCAGTTaGCTTCACCTCCGGCCCCTCCCTTTTCAACAGCAA +
Preference number: 6 (lower is better)
Translates to: HLSVTLLWMDCS*LHLRPLPFQQQ
Trigger: TTGCTGTTGAAAAGGGAGGGGCCGGAGGTGAAGCAAACTGCAGTCCATCCAGAGAAGTGTCACAGAGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583153.2
CDS TCA 72 bp CACAGATCTCCCATTCAGATTGTGCGTGTCCATGAATaGGAAAGCCTCGTCGCAGTTTGTGCCCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: HRSPIQIVRVHE*ESLVAVCALLS
Trigger: GCTGAGCAGGGCACAAACTGCGACGAGGCTTTCTCATTCATGGACACGCACAATCTGAATGGGAGATCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000577827.5
ENST00000578093.1
ENST00000580170.6
CDS CCA 72 bp CTGTATCTGGGTCAAGGTGTCCAATTTTATAGCTCGTaGAATCGACTGGCTGCCGGTCATTCCAGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: LYLGQGVQFYSS*NRLAAGHSSSH
Trigger: GTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS CCA 72 bp TTCTTGGGCCTCGCATGGGATCTGTCCTTCAAGGCTTaGCAAAAAGACCACTTCCTCACCTCAGCCTTAGCT +
Preference number: 6 (lower is better)
Translates to: FLGLAWDLSFKA*QKDHFLTSALA
Trigger: AGCTAAGGCTGAGGTGAGGAAGTGGTCTTTTTGCCAAGCCTTGAAGGACAGATCCCATGCGAGGCCCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578600.1
CDS TCA 72 bp TTGGCAAAAAGACCACTTCCTCACCTCAGCCTTAGCTaGCATGGGCTTCAGCATTGGCCCATTCTCTTGGGT +
Preference number: 6 (lower is better)
Translates to: LAKRPLPHLSLS*HGLQHWPILLG
Trigger: ACCCAAGAGAATGGGCCAATGCTGAAGCCCATGTCAGCTAAGGCTGAGGTGAGGAAGTGGTCTTTTTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578600.1
CDS GCA 72 bp ATGAGCAGGGCCTGGTTTGGGAACCTCACTTCTATCTaGATCGCAAAGCACCTGGGGATGCATGGTATGAAA +
Preference number: 6 (lower is better)
Translates to: MSRAWFGNLTSI*IAKHLGMHGMK
Trigger: TTTCATACCATGCATCCCCAGGTGCTTTGCGATGCAGATAGAAGTGAGGTTCCCAAACCAGGCCCTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578093.1
CDS CCA 72 bp TTTAGTCCAAGGGTGCTTGATGAGCAGGGCCTGGTTTaGGAACCTCACTTCTATCTGCATCGCAAAGCACCT +
Preference number: 6 (lower is better)
Translates to: FSPRVLDEQGLV*EPHFYLHRKAP
Trigger: AGGTGCTTTGCGATGCAGATAGAAGTGAGGTTCCCAAACCAGGCCCTGCTCATCAAGCACCCTTGGACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578093.1
CDS TCA 72 bp AAGACACAGATCTCCCATTCAGATTGTGCGTGTCCATaGATGAGAAAGCCTCGTCGCAGTTTGTGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: KTQISHSDCACP*MRKPRRSLCPA
Trigger: AGCAGGGCACAAACTGCGACGAGGCTTTCTCATTCATGGACACGCACAATCTGAATGGGAGATCTGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000577827.5
ENST00000578093.1
ENST00000580170.6
CDS TCA 72 bp GACCCAATACAAACCACCACACGCACTGCAGCACCATaGAAACTGTGGCTGAAGACCTCTGTCATTCTGATC +
Preference number: 6 (lower is better)
Translates to: DPIQTTTRTAAP*KLWLKTSVILI
Trigger: GATCAGAATGACAGAGGTCTTCAGCCACAGTTTTCATGGTGCTGCAGTGCGTGTGGTGGTTTGTATTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CCA 72 bp CTGCACTATGAGTTCTTGGCTTTCCTTCCGGCCCTCTaGGTTCATGAGGATCAGTTTCACACTGACATTGGT +
Preference number: 6 (lower is better)
Translates to: LHYEFLAFLPAL*VHEDQFHTDIG
Trigger: ACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578698.1
ENST00000580170.6
CDS CAA 72 bp AAGGACGATGGTGAAGACACAGATCTCCCATTCAGATaGTGCGTGTCCATGAATGAGAAAGCCTCGTCGCAG +
Preference number: 6 (lower is better)
Translates to: KDDGEDTDLPFR*CVSMNEKASSQ
Trigger: CTGCGACGAGGCTTTCTCATTCATGGACACGCACAATCTGAATGGGAGATCTGTGTCTTCACCATCGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000577827.5
ENST00000578093.1
ENST00000580170.6
CDS CAA 90 bp TGTCTGTGGATCCAGTTTGTTCATGTCATAATACAGAGACCTAACTaGGGAAGCAGGCACAGAGGTGTCCCCACAAAGACAGGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: CLWIQFVHVIIQRPN*GSRHRGVPTKTGFQ
Trigger: CTGGAAGCCTGTCTTTGTGGGGACACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTATTATGACATGAACAAACTGGATCCACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000583153.2
CDS CAA 90 bp TTTCATGCACACCTCTCTGTGACACTTCTCTGGATGGACTGCAGTTaGCTTCACCTCCGGCCCCTCCCTTTTCAACAGCAAATGTTCTTA +
Preference number: 6 (lower is better)
Translates to: FHAHLSVTLLWMDCS*LHLRPLPFQQQMFL
Trigger: TAAGAACATTTGCTGTTGAAAAGGGAGGGGCCGGAGGTGAAGCAAACTGCAGTCCATCCAGAGAAGTGTCACAGAGAGGTGTGCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583153.2
CDS GCA 72 bp GACGATGGTGAAGACACAGATCTCCCATTCAGATTGTaGGTGTCCATGAATGAGAAAGCCTCGTCGCAGTTT +
Preference number: 6 (lower is better)
Translates to: DDGEDTDLPFRL*VSMNEKASSQF
Trigger: AAACTGCGACGAGGCTTTCTCATTCATGGACACGCACAATCTGAATGGGAGATCTGTGTCTTCACCATCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000577827.5
ENST00000578093.1
ENST00000580170.6
CDS GCA 72 bp CATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATGGTaGAGACTGCCCTTCAAAGAAGCTCTGGGTAATAGG +
Preference number: 6 (lower is better)
Translates to: HSVLIFLSRVPW*RLPFKEALGNR
Trigger: CCTATTACCCAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CCA 72 bp AATTTTAACTGTATGGTCTGTCTGTTTCTCGGGTTCTaGGACTGGTTTCGGAGTGGCAGCTCCTTTTGTGGC +
Preference number: 6 (lower is better)
Translates to: NFNCMVCLFLGF*DWFRSGSSFCG
Trigger: GCCACAAAAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000580170.6
CDS CCA 72 bp AAGATGCCCGCGATGACTCCAGCAATTTTAACTGTATaGTCTGTCTGTTTCTCGGGTTCTGGGACTGGTTTC +
Preference number: 6 (lower is better)
Translates to: KMPAMTPAILTV*SVCFSGSGTGF
Trigger: GAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577468.2
ENST00000577827.5
ENST00000580170.6
ENST00000583289.5
CDS CCA 72 bp TGTAAGTATGGGACTGCACCAGGCTGCTGGTATCGCTaGCCATTGTGTGGGTTTCATCATTTATTGGCACTA +
Preference number: 6 (lower is better)
Translates to: CKYGTAPGCWYR*PLCGFHHLLAL
Trigger: TAGTGCCAATAAATGATGAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCCATACTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS CCA 72 bp GACGGTATCAATTTTAGCCCCACATCATCAAGAGAGTaGAGACAGTTCCTCCAGAGAGAAACACGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: DGINFSPTSSRE*RQFLQRETRSK
Trigger: CTTGGACCGTGTTTCTCTCTGGAGGAACTGTCTCCACTCTCTTGATGATGTGGGGCTAAAATTGATACCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CCA 72 bp GAAAATTTAGTCCAAGGGTGCTTGATGAGCAGGGCCTaGTTTGGGAACCTCACTTCTATCTGCATCGCAAAG +
Preference number: 6 (lower is better)
Translates to: ENLVQGCLMSRA*FGNLTSICIAK
Trigger: CTTTGCGATGCAGATAGAAGTGAGGTTCCCAAACCAGGCCCTGCTCATCAAGCACCCTTGGACTAAATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578093.1
CDS CAA 90 bp CCTCCTTCAGTGCGAATCATGCAGCGGTACTTTCCAGCATCTCGTTaGGTGGTATTCACAACATTAAATGAAGCAATGAAGCGTCGGGAG +
Preference number: 6 (lower is better)
Translates to: PPSVRIMQRYFPASR*VVFTTLNEAMKRRE
Trigger: CTCCCGACGCTTCATTGCTTCATTTAATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS CAA 90 bp ACATTATATCCAAATGGCTCCCAGCGGATAGTGATTTGCCGAGATTaGACCTCCACTACTTCTAGTTTTCTTGGGCCTCGCATGGGATCA +
Preference number: 6 (lower is better)
Translates to: TLYPNGSQRIVICRD*TSTTSSFLGPRMGS
Trigger: TGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS CAA 90 bp ACATTATATCCAAATGGCTCCCAGCGGATAGTGATTTGCCGAGATTaGACCTCCACTACTTCTAGTTTTCTTGGGCCTCGCATGGGATCT +
Preference number: 6 (lower is better)
Translates to: TLYPNGSQRIVICRD*TSTTSSFLGPRMGS
Trigger: AGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
CDS GCA 72 bp TTCTCATCTTTCTTAGCCGAGTCCCATGGTGCAGACTaGCCTTCAAAGAAGCTCTGGGTAATAGGAATTAGG +
Preference number: 6 (lower is better)
Translates to: FSSFLAESHGAD*PSKKLWVIGIR
Trigger: CCTAATTCCTATTACCCAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS GCA 72 bp CACAGTTCCCTATTTACGTCCCAGGTTTTCCATGAATaGTTGGTGGATGTAGTGCAGAGACCTTTGAGCTAC +
Preference number: 6 (lower is better)
Translates to: HSSLFTSQVFHE*LVDVVQRPLSY
Trigger: GTAGCTCAAAGGTCTCTGCACTACATCCACCAAGCATTCATGGAAAACCTGGGACGTAAATAGGGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578600.1
CDS CCA 72 bp CTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATaGTGCAGACTGCCCTTCAAAGAAGCTCTCGTATTC +
Preference number: 6 (lower is better)
Translates to: LHSVLIFLSRVP*CRLPFKEALVF
Trigger: GAATACGAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS CCA 72 bp CTTCATTCTGTTCTCATCTTTCTTAGCCGAGTCCCATaGTGCAGACTGCCCTTCAAAGAAGCTCTGGGTAAT +
Preference number: 6 (lower is better)
Translates to: LHSVLIFLSRVP*CRLPFKEALGN
Trigger: ATTACCCAGAGCTTCTTTGAAGGGCAGTCTGCACCATGGGACTCGGCTAAGAAAGATGAGAACAGAATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CAA 72 bp TATGGGACTGCACCAGGCTGCTGGTATCGCTGGCCATaGTGTGGGTTTCATCATTTATTGGCACTAAAATTG +
Preference number: 6 (lower is better)
Translates to: YGTAPGCWYRWP*CGFHHLLALKL
Trigger: CAATTTTAGTGCCAATAAATGATGAAACCCACACAATGGCCAGCGATACCAGCAGCCTGGTGCAGTCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS CAA 90 bp AGTCAAGGTGTTCACTTGCTCCCAATTGAAGTCATCACCTTCAGATaGACTATATCCACATGTGCTATACGGCTCATCAAAGAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SQGVHLLPIEVITFR*TISTCAIRLIKEAA
Trigger: GGCTGCCTCTTTGATGAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS TCA 72 bp TGTGTTTGGCAAAGGATGCTGGGTGACTATAAAAGCTaGAGGCTGTTTATAGCTGTCCATGAGGGCAGCATT +
Preference number: 6 (lower is better)
Translates to: CVWQRMLGDYKS*RLFIAVHEGSI
Trigger: AATGCTGCCCTCATGGACAGCTATAAACAGCCTTCAGCTTTTATAGTCACCCAGCATCCTTTGCCAAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS GCA 72 bp AGTTTGATATTCCAACACCTCCTTCAGTGCGAATCATaGAGCGGTACTTTCCAGCATCTCGTTTGGTGGTAT +
Preference number: 6 (lower is better)
Translates to: SLIFQHLLQCES*SGTFQHLVWWY
Trigger: ATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS CCA 72 bp ACAGAGTTACTAGTTAGTATACAGTACTTCACAAAATaGGCAAATCCCCAGGACGCCAGACACTGGGCAGAA +
Preference number: 6 (lower is better)
Translates to: TELLVSIQYFTK*ANPQDARHWAE
Trigger: TTCTGCCCAGTGTCTGGCGTCCTGGGGATTTGCCCATTTTGTGAAGTACTGTATACTAACTAGTAACTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CAA 72 bp TTCTGTATCCCAGCTTACTTCTTCTCGCACTTGTTCTaGTCCTCCAACTTGGTAACAGTAGTGGACAGTGAG +
Preference number: 6 (lower is better)
Translates to: FCIPAYFFSHLF*SSNLVTVVDSE
Trigger: CTCACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS CAA 72 bp CCACTGAAGAAATATCTTCTCTTCAAAGGTACTTCCTaGTATGGATTCAGTGGGAACAGCACCTGGGAGGTC +
Preference number: 6 (lower is better)
Translates to: PLKKYLLFKGTS*YGFSGNSTWEV
Trigger: GACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578698.1
ENST00000580170.6
CDS CAA 72 bp ATCCAGTTTGTTCATGTCATAATACAGAGACCTAACTaGGGAAGCAGGCACAGAGGTGTCCCCACAAAGACA +
Preference number: 6 (lower is better)
Translates to: IQFVHVIIQRPN*GSRHRGVPTKT
Trigger: TGTCTTTGTGGGGACACCTCTGTGCCTGCTTCCCAAGTTAGGTCTCTGTATTATGACATGAACAAACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000583153.2
CDS CAA 90 bp TGTATCCCAGCTTACTTCTTCTCGCACTTGTTCTTGTCCTCCAACTaGGTAACAGTAGTGGACAGTGAGATTATAACTGTGGCAACGAGT +
Preference number: 6 (lower is better)
Translates to: CIPAYFFSHLFLSSN*VTVVDSEIITVATS
Trigger: ACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS CAA 90 bp TGGTTCTCTCCACTGAAGAAATATCTTCTCTTCAAAGGTACTTCCTaGTATGGATTCAGTGGGAACAGCACCTGGGAGGTCTTCATCTGT +
Preference number: 6 (lower is better)
Translates to: WFSPLKKYLLFKGTS*YGFSGNSTWEVFIC
Trigger: ACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578698.1
ENST00000580170.6
CDS TCA 72 bp ACATTGGTGTATGGTGACAGGTTAGTGATCGTGTGTTaGGGGTGTGAGTTTTCTGTATCCCAGCTTACTTCT +
Preference number: 6 (lower is better)
Translates to: TLVYGDRLVIVC*GCEFSVSQLTS
Trigger: AGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCACCATACACCAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS GCA 72 bp ATAAAAGTTAGGCCAGAAAGTACTAATGGCCAGTTCTaGCCTGTTCCATGTACGTGTTGGGTCTCCAGATAT +
Preference number: 6 (lower is better)
Translates to: IKVRPESTNGQF*PVPCTCWVSRY
Trigger: ATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTCTGGCCTAACTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS GCA 72 bp GGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTTaGAGAGCTGTTTACACCATCAGCCAGAATTCAAGT +
Preference number: 6 (lower is better)
Translates to: GTSWLCGMKGIV*RAVYTISQNSS
Trigger: ACTTGAATTCTGGCTGATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000580949.1
CDS CCA 72 bp CCTGGTCAGGAGCACACTAATCTCATATTCTGTATCTaGGTCAAGGTGTCCAATTTTATAGCTCGTGGAATC +
Preference number: 6 (lower is better)
Translates to: PGQEHTNLIFCI*VKVSNFIARGI
Trigger: GATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578916.2
ENST00000580170.6
CDS CCA 72 bp GTACACAAGTGTGTAGCTATGTTGCTGTTGCTGAAATaGCACCTGGATCACTACAACGTGGCTAAAATTGCA +
Preference number: 6 (lower is better)
Translates to: VHKCVAMLLLLK*HLDHYNVAKIA
Trigger: TGCAATTTTAGCCACGTTGTAGTGATCCAGGTGCCATTTCAGCAACAGCAACATAGCTACACACTTGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578093.1
CDS CAA 72 bp CCATGGATCAGAAGTCGGTTTAGTCAAGGTGTTCACTaGCTCCCAATTGAAGTCATCACCTTCAGATTGACT +
Preference number: 6 (lower is better)
Translates to: PWIRSRFSQGVH*LPIEVITFRLT
Trigger: AGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGACTAAACCGACTTCTGATCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS CAA 72 bp TGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTaGCAGAGCTGTTTACACCATCAGCCAGAATTCAAG +
Preference number: 6 (lower is better)
Translates to: WNVLALWYERDC*QSCLHHQPEFK
Trigger: CTTGAATTCTGGCTGATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000580949.1
CDS CAA 90 bp CAAATACCATGGAACGTCTTGGCTTTGTGGTATGAAAGGGATTGTTaGCAGAGCTGTTTACACCATCAGCCAGAATTCAAGTATTCCAGG +
Preference number: 6 (lower is better)
Translates to: QIPWNVLALWYERDC*QSCLHHQPEFKYSR
Trigger: CCTGGAATACTTGAATTCTGGCTGATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000580949.1
CDS CCA 72 bp GAAGAAATATCTTCTCTTCAAAGGTACTTCCTTGTATaGATTCAGTGGGAACAGCACCTGGGAGGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: EEISSLQRYFLV*IQWEQHLGGLH
Trigger: ATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578698.1
ENST00000580170.6
CDS CAA 72 bp GCTTACTTCTTCTCGCACTTGTTCTTGTCCTCCAACTaGGTAACAGTAGTGGACAGTGAGATTATAACTGTG +
Preference number: 6 (lower is better)
Translates to: AYFFSHLFLSSN*VTVVDSEIITV
Trigger: CACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS CAA 72 bp GAGATAACCCTTCAGCCACTATTCTCAGGAGCGGTCTaGCTCTGGTTACCAGCTAGTTTAAAAGAGATAATA +
Preference number: 6 (lower is better)
Translates to: EITLQPLFSGAV*LWLPASLKEII
Trigger: TATTATCTCTTTTAAACTAGCTGGTAACCAGAGCAAGACCGCTCCTGAGAATAGTGGCTGAAGGGTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS CAA 90 bp GAAGTCTTCATCTCTTTTGCACAAATACCATGGAACGTCTTGGCTTaGTGGTATGAAAGGGATTGTTTGCAGAGCTGTTTACACCATCAG +
Preference number: 6 (lower is better)
Translates to: EVFISFAQIPWNVLA*WYERDCLQSCLHHQ
Trigger: CTGATGGTGTAAACAGCTCTGCAAACAATCCCTTTCATACCACAAAGCCAAGACGTTCCATGGTATTTGTGCAAAAGAGATGAAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
ENST00000580949.1
CDS TCA 72 bp TTCACTTGCTCCCAATTGAAGTCATCACCTTCAGATTaGCTATATCCACATGTGCTATACGGCTCATCAAAG +
Preference number: 6 (lower is better)
Translates to: FTCSQLKSSPSD*LYPHVLYGSSK
Trigger: CTTTGATGAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS GCA 72 bp ACATTATATCCAAATGGCTCCCAGCGGATAGTGATTTaGCGAGATTTGACCTCCACTACTTCTAGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: TLYPNGSQRIVI*RDLTSTTSSFL
Trigger: AAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS CCA 72 bp ATTATAACTGTGGCAACGAGTTACATTATATCCAAATaGCTCCCAGCGGATAGTGATTTGCCGAGATTTGAC +
Preference number: 6 (lower is better)
Translates to: IITVATSYIISK*LPADSDLPRFD
Trigger: GTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS CAA 72 bp GTTCACTTGCTCCCAATTGAAGTCATCACCTTCAGATaGACTATATCCACATGTGCTATACGGCTCATCAAA +
Preference number: 6 (lower is better)
Translates to: VHLLPIEVITFR*TISTCAIRLIK
Trigger: TTTGATGAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000580170.6
CDS CAA 90 bp ACCCCTTCCTGTAGGGCTACGTGTCTCTCCACTACTACTAGTTGTTaGATTTGTCTGATTACTATCTTCAAATTCTTGGTCCCAAGTATT +
Preference number: 6 (lower is better)
Translates to: TPSCRATCLSTTTSC*ICLITIFKFLVPSI
Trigger: AATACTTGGGACCAAGAATTTGAAGATAGTAATCAGACAAATCAAACAACTAGTAGTAGTGGAGAGACACGTAGCCCTACAGGAAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400053.8
CDS TCA 72 bp GTTCTTGTCCTCCAACTTGGTAACAGTAGTGGACAGTaGGATTATAACTGTGGCAACGAGTTACATTATATC +
Preference number: 6 (lower is better)
Translates to: VLVLQLGNSSGQ*DYNCGNELHYI
Trigger: GATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000578571.5
ENST00000578600.1
ENST00000578698.1
ENST00000580170.6
CDS CAA 72 bp CCATTGTGTGGGTTTCATCATTTATTGGCACTAAAATaGCAGTTGGCACAAATGGGTCTGGGTAATAGGAAT +
Preference number: 6 (lower is better)
Translates to: PLCGFHHLLALK*QLAQMGLGNRN
Trigger: ATTCCTATTACCCAGACCCATTTGTGCCAACTGCAATTTTAGTGCCAATAAATGATGAAACCCACACAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400060.8
ENST00000580170.6
CDS CAA 72 bp GCAGTTGGATTTCTAACTATGACACAGTTGCAAGGTTaGGCTGAGATCTTGGATAGATCAACTGAAGAAGAA +
Preference number: 6 (lower is better)
Translates to: AVGFLTMTQLQG*AEILDRSTEEE
Trigger: TTCTTCTTCAGTTGATCTATCCAAGATCTCAGCCAAACCTTGCAACTGTGTCATAGTTAGAAATCCAACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS TCA 72 bp ATGATAACCATCGATATAATTGCCATTGATATAGTCTaGGTTTGTGTCTCCTTCTATTGTCTGCAGCCTCAC +
Preference number: 6 (lower is better)
Translates to: MITIDIIAIDIV*VCVSFYCLQPH
Trigger: GTGAGGCTGCAGACAATAGAAGGAGACACAAACTCAGACTATATCAATGGCAATTATATCGATGGTTATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS CCA 72 bp AAAAGTGTGCAAATTTGGGCTCTTGATTCTGTTACCTaGAAAACTCCTGGGTTTGTTTGGTTTGTTTATGAG +
Preference number: 6 (lower is better)
Translates to: KSVQIWALDSVT*KTPGFVWFVYE
Trigger: CTCATAAACAAACCAAACAAACCCAGGAGTTTTCCAGGTAACAGAATCAAGAGCCCAAATTTGCACACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577827.5
CDS TCA 72 bp GATTGGGTCGATGATAACCATCGATATAATTGCCATTaGTATAGTCTGAGTTTGTGTCTCCTTCTATTGTCT +
Preference number: 6 (lower is better)
Translates to: DWVDDNHRYNCH*YSLSLCLLLLS
Trigger: AGACAATAGAAGGAGACACAAACTCAGACTATATCAATGGCAATTATATCGATGGTTATCATCGACCCAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332175.12
ENST00000400053.8
ENST00000400060.8
ENST00000577827.5
ENST00000580170.6
CDS TCA 72 bp AGTGCAAAGAAGGTCCAGAAAAACTTGGCATTACTGTaGAGACAAGAAGTCTGGAAGTTCTTAATTCAAAAC +
Preference number: 6 (lower is better)
Translates to: SAKKVQKNLALL*RQEVWKFLIQN
Trigger: GTTTTGAATTAAGAACTTCCAGACTTCTTGTCTTCACAGTAATGCCAAGTTTTTCTGGACCTTCTTTGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577827.5