RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRJ (Homo sapiens)

Ensembl gene IDs: ENSG00000149177

Ensembl transcript IDs: ENST00000418331.7, ENST00000440289.6, ENST00000526550.1, ENST00000527952.1, ENST00000534219.5, ENST00000613246.4, ENST00000615445.4

Found 938 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCATTTGGAATCCCAGACCGCTCCCCCGCAAGAGTTCCTCCCATaGTTGCTGGGGCCGCTTGCCCATTTCCCAAGCCCACACCAGGCG +
Preference number: 1 (lower is better)
Translates to: AHLESQTAPPQEFLP*LLGPLAHFPSPHQA
Trigger: CGCCTGGTGTGGGCTTGGGAAATGGGCAAGCGGCCCCAGCAATCATGGGAGGAACTCTTGCGGGGGAGCGGTCTGGGATTCCAAATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 90 bp CACTGGCCCTGTCCCCAGCCCTTTTCAGGATGCAGAGAAGCATCGTaGCCTTCGTGTGACCTGCCCATTTGGAATCCCAGACCGCTCCCC +
Preference number: 1 (lower is better)
Translates to: HWPCPQPFSGCREAS*PSCDLPIWNPRPLP
Trigger: GGGGAGCGGTCTGGGATTCCAAATGGGCAGGTCACACGAAGGTCACGATGCTTCTCTGCATCCTGAAAAGGGCTGGGGACAGGGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR GCA 90 bp AGCCCTTTTCAGGATGCAGAGAAGCATCGTGACCTTCGTGTGACCTaGCCATTTGGAATCCCAGACCGCTCCCCCGCAAGAGTTCCTCCC +
Preference number: 1 (lower is better)
Translates to: SPFQDAEKHRDLRVT*PFGIPDRSPARVPP
Trigger: GGGAGGAACTCTTGCGGGGGAGCGGTCTGGGATTCCAAATGGGCAGGTCACACGAAGGTCACGATGCTTCTCTGCATCCTGAAAAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 90 bp CCACACCCAGCTTCATACAGCACCCTGAGGACAATGTGGCTTCCCTaGTTCACACCTACTGAGCCAAGGCCCCCTCTGAAGTTAGGTCAA +
Preference number: 1 (lower is better)
Translates to: PHPASYSTLRTMWLP*FTPTEPRPPLKLGQ
Trigger: TTGACCTAACTTCAGAGGGGGCCTTGGCTCAGTAGGTGTGAATCAGGGAAGCCACATTGTCCTCAGGGTGCTGTATGAAGCTGGGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CCA 90 bp TGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAACCAGCTaGCCACCAGTCTTTGGCCCTTTCATTGACACCCAAACCCATACC +
Preference number: 1 (lower is better)
Translates to: CSWEMLSMAQIPQTS*PPVFGPFIDTQTHT
Trigger: GGTATGGGTTTGGGTGTCAATGAAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CCA 90 bp CAACTTTGGAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATaGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTT +
Preference number: 1 (lower is better)
Translates to: QLWRQKVVVPGRCYQ*PKSPKPAGHQSLAL
Trigger: AAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTCCAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CCA 90 bp CAACAGAGCACAAATCCAGTGGAGTCAATTAGGCGGAAGTCTGGCTaGAGGTCACAGTATGGCTGCAGTGGGCAGACACCAAATGTCATT +
Preference number: 1 (lower is better)
Translates to: QQSTNPVESIRRKSG*RSQYGCSGQTPNVI
Trigger: AATGACATTTGGTGTCTGCCCACTGCAGCCATACTGTGACCTCCAGCCAGACTTCCGCCTAATTGACTCCACTGGATTTGTGCTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 90 bp TATGGCTGCAGTGGGCAGACACCAAATGTCATTTCCTGCTGGTGCTaGTCATCACTAGATCCAACTTTGGAGGCAAAAAGTCGTTGTTCC +
Preference number: 1 (lower is better)
Translates to: YGCSGQTPNVISCWC*SSLDPTLEAKSRCS
Trigger: GGAACAACGACTTTTTGCCTCCAAAGTTGGATCTAGTGATGATCAGCACCAGCAGGAAATGACATTTGGTGTCTGCCCACTGCAGCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 90 bp GGATTCCTCTGCTTCTCCCATTCCCACCCACAGAAATTCTCAAGGTaGTATTTGAGTCGCCATTCTCACCCAACCAATGGGTTGAAAATG +
Preference number: 1 (lower is better)
Translates to: GFLCFSHSHPQKFSR*YLSRHSHPTNGLKM
Trigger: CATTTTCAACCCATTGGTTGGGTGAGAATGGCGACTCAAATATCACCTTGAGAATTTCTGTGGGTGGGAATGGGAGAAGCAGAGGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CCA 90 bp AGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGACTTaGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGA +
Preference number: 1 (lower is better)
Translates to: SRTHYCGNSHRTPGT*LFLHKTLSTSLPIG
Trigger: TCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR GCA 90 bp ACAGACATGAGAAAAAGGATAATACAGGGACAAGAAAAGGATTTCTaGCACTGTAGGATTCCTCTGCTTCTCCCATTCCCACCCACAGAA +
Preference number: 1 (lower is better)
Translates to: TDMRKRIIQGQEKDF*HCRIPLLLPFPPTE
Trigger: TTCTGTGGGTGGGAATGGGAGAAGCAGAGGAATCCTACAGTGGCAGAAATCCTTTTCTTGTCCCTGTATTATCCTTTTTCTCATGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGGGAGGCAGGCCAGTGTaGAGGTGTGGGAGGAATCCG +
Preference number: 2 (lower is better)
Translates to: GAPWDLPPITMVSDILEGGGRPV*RCGRNP
Trigger: CGGATTCCTCCCACACCTTCACACTGGCCTGCCTCC...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGTGCCTTCGCTGTGGGTaGGACGGTCTGGTTCACTCC +
Preference number: 2 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGCLRCG*DGLVHS
Trigger: GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCA...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTGCCTTCGCTGTGGGTaGGACGGTCTGGTTCACTCC +
Preference number: 2 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPCLRCG*DGLVHS
Trigger: GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
3UTR-3UTR CCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAGCCAGTGTGAAGGTGTaGGAGGAATCCGCCCACACC +
Preference number: 2 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQASVKV*EESAHT
Trigger: GGTGTGGGCGGATTCCTCCCACACCTTCACACTGGC...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACATCAGGAATGCAGATaGTTTGCTCCCCACCCATCC +
Preference number: 2 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVHQECR*FAPHPS
Trigger: GGATGGGTGGGGAGCAAATCATCTGCATTCCTGATG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTGCCTTCGCTGTGGGTaGGACGGTCTGGTTCACTCC +
Preference number: 2 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTCLRCG*DGLVHS
Trigger: GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
3UTR-3UTR GCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTGAGCTCCCTGGGATTTaGCACCCATCACAATGGTTT +
Preference number: 2 (lower is better)
Translates to: AINGPNPPNQLATSLWPFELPGI*HPSQWF
Trigger: AAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTC...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CAA 90 bp TGCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTaGGCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: CYQWPKSPKPAGHQS*ALSLTPKPIPAAFL
Trigger: CAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAACAGGGACCTATGAATaGAGTACCGACCGCTCCGAG +
Preference number: 2 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQTGTYE*STDRSE
Trigger: CTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGT...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCCAAGAGTTCCTCCCATaGTTGCTGGGGCCGCTTGCC +
Preference number: 2 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVQEFLP*LLGPLA
Trigger: GGCAAGCGGCCCCAGCAATCATGGGAGGAACTCTTG...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTGGAATGCAGATGATTTaGTCCCCACCCATCCACAGC +
Preference number: 2 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTGMQMI*SPPIHS
Trigger: GCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCC...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAAGTTCCTCCCATGATTaGTGGGGCCGCTTGCCCATT +
Preference number: 2 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQSSSHD*WGRLPI
Trigger: AATGGGCAAGCGGCCCCAGCAATCATGGGAGGAACT...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTGTGGGTGCGACGGTCTaGTTCACTCCAGAAAGGTTA +
Preference number: 2 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTVGATV*FTPERL
Trigger: TAACCTTTCTGGAGTGAACCAGACCGTCGCACCCAC...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAGGCTTAGGAGCTCCCTaGGATTTGCCACCCATCACA +
Preference number: 2 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQGLGAP*DLPPIT
Trigger: TGTGATGGGTGGCAAATCCCAGGGAGCTCCTAAGCC...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAACATCAGGAATGCAGATaGTTTGCTCCCCACCCATCC +
Preference number: 2 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQHQECR*FAPHPS
Trigger: GGATGGGTGGGGAGCAAATCATCTGCATTCCTGATG...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTCGACATCGGGGCATGTaGCTTCGCTGTGGGTGCGAC +
Preference number: 2 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFRHRGM*LRCGCD
Trigger: GTCGCACCCACAGCGAAGGCACATGCCCCGATGTCG...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCATTGCTGGGGCCGCTTaGCCATTTCCCAAGCCCACA +
Preference number: 2 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVIAGAA*PFPKPT
Trigger: TGTGGGCTTGGGAAATGGGCAAGCGGCCCCAGCAAT...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCCATGTGCCTTCGCTGTaGGTGCGACGGTCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVHVPSL*VRRSGS
Trigger: TGAACCAGACCGTCGCACCCACAGCGAAGGCACATG...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCTGTGACCTGCCCATTTaGAATCCCAGACCGCTCCCC +
Preference number: 2 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVCDLPI*NPRPLP
Trigger: GGGGAGCGGTCTGGGATTCCAAATGGGCAGGTCACA...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTCCTTACCACCCCCACTaGCCCTGTCCCCAGCCCTTT +
Preference number: 2 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFPYHPH*PCPQPF
Trigger: AAAGGGCTGGGGACAGGGCCAGTGGGGGTGGTAAGG...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCAAGAAAAGGATTTCTaGCACTGTAGGATTCCTCTG +
Preference number: 2 (lower is better)
Translates to: GAPWDLPPITMVSDILEGQEKDF*HCRIPL
Trigger: CAGAGGAATCCTACAGTGGCAGAAATCCTTTTCTTG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTAGGACTCCAGGGACTTaGTTATTCCTTCATAAAACC +
Preference number: 2 (lower is better)
Translates to: AINGPNPPNQLATSLWPFRTPGT*LFLHKT
Trigger: GGTTTTATGAAGGAATAACCAAGTCCCTGGAGTCCT...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CAA 90 bp CTGGTGCTGATCATCACTAGATCCAACTTTGGAGGCAAAAAGTCGTaGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAACCAG +
Preference number: 2 (lower is better)
Translates to: LVLIITRSNFGGKKS*FLGDAINGPNPPNQ
Trigger: CTGGTTTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTCCAAAGTTGGATCTAGTGATGATCAGCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCCCACGTACCCCTCCCTaGGCAATCATCATCCACAAT +
Preference number: 2 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVPRTPP*AIIIHN
Trigger: ATTGTGGATGATGATTGCGCAGGGAGGGGTACGTGG...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGGAAGTGTTCACAGATTaGCACGCTTCTGAACATACA +
Preference number: 2 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGEVFTD*HASEHT
Trigger: TGTATGTTCAGAAGCGTGGCAATCTGTGAACACTTC...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCCTTGTCAACTTCATTaGCTATTGGAGGATAAACTC +
Preference number: 2 (lower is better)
Translates to: AINGPNPPNQLATSLWPFPCQLH*LLEDKL
Trigger: GAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTCATGTGCCTTCGCTGTaGGTGCGACGGTCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFHVPSL*VRRSGS
Trigger: TGAACCAGACCGTCGCACCCACAGCGAAGGCACATG...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACAGAAATTCTCAAGGTaGTATTTGAGTCGCCATTCT +
Preference number: 2 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVQKFSR*YLSRHS
Trigger: AGAATGGCGACTCAAATATCACCTTGAGAATTTCTG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAACACTGAATTCACGCTaGAGTGTTCACAGATTGCCA +
Preference number: 2 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQTLNSR*SVHRLP
Trigger: TGGCAATCTGTGAACACTTCAGCGTGAATTCAGTGT...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTACAGGGACCTATGAATaGAGTACCGACCGCTCCGAG +
Preference number: 2 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFTGTYE*STDRSE
Trigger: CTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACGACATCGGGGCATGTaGCTTCGCTGTGGGTGCGAC +
Preference number: 2 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKRHRGM*LRCGCD
Trigger: GTCGCACCCACAGCGAAGGCACATGCCCCGATGTCG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTTGGTTTCGGACATATTaGAGGGGAGAGGGCCACAGC +
Preference number: 2 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFWFRTY*RGEGHS
Trigger: GCTGTGGCCCTCTCCCCTCCAATATGTCCGAAACCA...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAAGCCTCTCAAGTAGCTaGGACGATGGGTGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: HVPCWCAAPINSSFTLGISLSSS*DDGCRP
Trigger: TGGCCTGCACCCATCGTCCCAGCTACTTGAGAGGCT...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
3UTR-3UTR GCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTATTGTCATCTATCATATaGAGCTTCATGCCCTCAAAA +
Preference number: 2 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVLSSII*SFMPSK
Trigger: TTTTGAGGGCATGAAGCTGCATATGATAGATGACAA...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAACAAGAAAAGGATTTCTaGCACTGTAGGATTCCTCTG +
Preference number: 2 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQQEKDF*HCRIPL
Trigger: CAGAGGAATCCTACAGTGGCAGAAATCCTTTTCTTG...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTGTGGGTGCGACGGTCTaGTTCACTCCAGAAAGGTTA +
Preference number: 2 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFVGATV*FTPERL
Trigger: TAACCTTTCTGGAGTGAACCAGACCGTCGCACCCAC...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTAGAGACGAAAGCCAGTaGACTTTGGGGAAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFRDESQ*TLGKEG
Trigger: TCCCTCCTTCCCCAAAGTCCACTGGCTTTCGTCTCT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCAGATTGCCACGCTTCTaGACATACACACACACATAC +
Preference number: 2 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVRLPRF*TYTHTY
Trigger: GTATGTGTGTGTGTATGTTCAGAAGCGTGGCAATCT...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCCAACTCTGTTTCAGATaGTGGAATTCCAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: INISGFTSHTFSAATTQFQLCFR*WNSRQV
Trigger: CACCTGCCTGGAATTCCATCATCTGAAACAGAGTTG...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
3UTR-3UTR GCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGGAATGCAGATGATTTaGTCCCCACCCATCCACAGC +
Preference number: 2 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGGMQMI*SPPIHS
Trigger: GCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAAGGCTGGTGCTAGTCTaGAACTGTTGGGCCAAGCAA +
Preference number: 2 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIRLVLV*NCWAKQ
Trigger: TTGCTTGGCCCAACAGTTGCAGACTAGCACCAGCCT...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
3UTR-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTGAGATCTGTATGAGTTaGAGGCAGGCCAGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFEICMS*RQASVK
Trigger: CTTCACACTGGCCTGCCTCCAACTCATACAGATCTC...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATACTAGTCTGCAACTGTTaGGCCAAGCAATCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: HVPCWCAAPINSSFTLGILVCNC*AKQSSC
Trigger: GCAGGAGGATTGCTTGGCCCAACAGTTGCAGACTAG...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
3UTR-3UTR TCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGACAAAGAGGCCTCCCCTaGTCAAATGAGAACAGAAAT +
Preference number: 2 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGQRGLP*SNENRN
Trigger: ATTTCTGTTCTCATTTGATCAGGGGAGGCCTCTTTG...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAACTGTAGGATTCCTCTaGTTCTCCCATTCCCACCCA +
Preference number: 2 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKTVGFL*FSHSHP
Trigger: TGGGTGGGAATGGGAGAAGCAGAGGAATCCTACAGT...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGAAGTGTTCACAGATTaGCACGCTTCTGAACATACA +
Preference number: 2 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGEVFTD*HASEHT
Trigger: TGTATGTTCAGAAGCGTGGCAATCTGTGAACACTTC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CAA 90 bp ACACAGCTGCTACACAGTAGTCTGAAAACCCAGGACTTAAAACTTTaGAGGCAAATCAACAACAGTCACCAAGACTTGTTTAGCTCAATA +
Preference number: 2 (lower is better)
Translates to: TQLLHSSLKTQDLKL*RQINNSHQDLFSSI
Trigger: TATTGAGCTAAACAAGTCTTGGTGACTGTTGTTGATTTGCCTCAAAAGTTTTAAGTCCTGGGTTTTCAGACTACTGTGTAGCAGCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAACCCAACCAATGGGTTaGAAATGTTGCCAACAGAAG +
Preference number: 2 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTTQPMG*KCCQQK
Trigger: CTTCTGTTGGCAACATTTTCAACCCATTGGTTGGGT...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATTGTCATCTATCATATaGAGCTTCATGCCCTCAAAA +
Preference number: 2 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGLSSII*SFMPSK
Trigger: TTTTGAGGGCATGAAGCTGCATATGATAGATGACAA...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR TCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAAATATAGATCTCTACTaGGTTTTGCCTGTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTNIDLY*VLPVEA
Trigger: TGCTTCCACAGGCAAAACTCAGTAGAGATCTATATT...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR GCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAATCTCTACTGAGTTTTaGCTGTGGAAGCATAATTCA +
Preference number: 2 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTISTEF*LWKHNS
Trigger: TGAATTATGCTTCCACAGGCAAAACTCAGTAGAGAT...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 72 bp GAATCCCAGACCGCTCCCCCGCAAGAGTTCCTCCCATaGTTGCTGGGGCCGCTTGCCCATTTCCCAAGCCCA +
Preference number: 3 (lower is better)
Translates to: ESQTAPPQEFLP*LLGPLAHFPSP
Trigger: TGGGCTTGGGAAATGGGCAAGCGGCCCCAGCAATCATGGGAGGAACTCTTGCGGGGGAGCGGTCTGGGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR GCA 72 bp CAGGATGCAGAGAAGCATCGTGACCTTCGTGTGACCTaGCCATTTGGAATCCCAGACCGCTCCCCCGCAAGA +
Preference number: 3 (lower is better)
Translates to: QDAEKHRDLRVT*PFGIPDRSPAR
Trigger: TCTTGCGGGGGAGCGGTCTGGGATTCCAAATGGGCAGGTCACACGAAGGTCACGATGCTTCTCTGCATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 72 bp CTTTTCAGGATGCAGAGAAGCATCGTGACCTTCGTGTaGCCTGCCCATTTGGAATCCCAGACCGCTCCCCCG +
Preference number: 3 (lower is better)
Translates to: LFRMQRSIVTFV*PAHLESQTAPP
Trigger: CGGGGGAGCGGTCTGGGATTCCAAATGGGCAGGTCACACGAAGGTCACGATGCTTCTCTGCATCCTGAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CCA 72 bp CAAGTCCCTTCCTCTGACTTCTCTGTGGCAGTGATGTaGGCAGAGCAGGGCTTAGGAGCTCCCTGGGATTTG +
Preference number: 3 (lower is better)
Translates to: QVPSSDFSVAVM*AEQGLGAPWDL
Trigger: CAAATCCCAGGGAGCTCCTAAGCCCTGCTCTGCCCACATCACTGCCACAGAGAAGTCAGAGGAAGGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 72 bp GCTTCATACAGCACCCTGAGGACAATGTGGCTTCCCTaGTTCACACCTACTGAGCCAAGGCCCCCTCTGAAG +
Preference number: 3 (lower is better)
Translates to: ASYSTLRTMWLP*FTPTEPRPPLK
Trigger: CTTCAGAGGGGGCCTTGGCTCAGTAGGTGTGAATCAGGGAAGCCACATTGTCCTCAGGGTGCTGTATGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 72 bp GAGGAATCCGCCCACACCCAGCTTCATACAGCACCCTaGGGACAATGTGGCTTCCCTGATTCACACCTACTG +
Preference number: 3 (lower is better)
Translates to: EESAHTQLHTAP*GQCGFPDSHLL
Trigger: CAGTAGGTGTGAATCAGGGAAGCCACATTGTCCTCAGGGTGCTGTATGAAGCTGGGTGTGGGCGGATTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR GCA 72 bp ACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTaGGACGGTCTGGTTCACTCCAGAAAGGTTATTCCT +
Preference number: 3 (lower is better)
Translates to: TCRHRGMCLRCG*DGLVHSRKVIP
Trigger: AGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
3UTR-3UTR CAA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGAGGAATGCAGATGATTaGCTCCCCACCCATCCACAG +
Preference number: 3 (lower is better)
Translates to: GAPWDLPPITMVSDILEGRNADD*LPTHPQ
Trigger: CTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 72 bp CACAGCCCACAGAACTGCTGCCTGAACAGGGACCTATaGATGAAGTACCGACCGCTCCGAGATCTGTATGAG +
Preference number: 3 (lower is better)
Translates to: HSPQNCCLNRDL*MKYRPLRDLYE
Trigger: CTCATACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAGTTCTGTGGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 72 bp TGTCCCCAGCCCTTTTCAGGATGCAGAGAAGCATCGTaGCCTTCGTGTGACCTGCCCATTTGGAATCCCAGA +
Preference number: 3 (lower is better)
Translates to: CPQPFSGCREAS*PSCDLPIWNPR
Trigger: TCTGGGATTCCAAATGGGCAGGTCACACGAAGGTCACGATGCTTCTCTGCATCCTGAAAAGGGCTGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CCA 72 bp AAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTaGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTAT +
Preference number: 3 (lower is better)
Translates to: KNMSTSGHVPSL*VRRSGSLQKGY
Trigger: ATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
3UTR-3UTR CAA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCCAACAGAAGAGTCTTaGGAGAAAACTGGGAGGGAA +
Preference number: 3 (lower is better)
Translates to: GAPWDLPPITMVSDILEGPTEES*EKTGRE
Trigger: TTCCCTCCCAGTTTTCTCCAAAGACTCTTCTGTTGG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR GCA 72 bp ATTAGACATATAAAAACATGTCGACATCGGGGCATGTaGCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCC +
Preference number: 3 (lower is better)
Translates to: IRHIKTCRHRGM*LRCGCDGLVHS
Trigger: GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGTCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
3UTR-3UTR CAA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAAGTGACCTCATCCCATaGGTCATCAGGAATGCAGAT +
Preference number: 3 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQSDLIP*VIRNAD
Trigger: ATCTGCATTCCTGATGACCAATGGGATGAGGTCACT...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CCA 72 bp CTAGATCCAACTTTGGAGGCAAAAAGTCGTTGTTCCTaGGAGATGCTATCAATGGCCCAAATCCCCCAAACC +
Preference number: 3 (lower is better)
Translates to: LDPTLEAKSRCS*EMLSMAQIPQT
Trigger: GGTTTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTCCAAAGTTGGATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CAA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGCAACTTCATTGCCTATaGGAGGATAAACTCAAAACA +
Preference number: 3 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGQLHCL*EDKLKT
Trigger: TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTG...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACAACTTCATTGCCTATaGGAGGATAAACTCAAAACA +
Preference number: 3 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVQLHCL*EDKLKT
Trigger: TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR TCA 72 bp AGTGGGCAGACACCAAATGTCATTTCCTGCTGGTGCTaGTCATCACTAGATCCAACTTTGGAGGCAAAAAGT +
Preference number: 3 (lower is better)
Translates to: SGQTPNVISCWC*SSLDPTLEAKS
Trigger: ACTTTTTGCCTCCAAAGTTGGATCTAGTGATGATCAGCACCAGCAGGAAATGACATTTGGTGTCTGCCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CCA 72 bp CATTACTGTGGCAACAGCCACAGGACTCCAGGGACTTaGTTATTCCTTCATAAAACCTTGTCAACTTCATTG +
Preference number: 3 (lower is better)
Translates to: HYCGNSHRTPGT*LFLHKTLSTSL
Trigger: CAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCCTGGAGTCCTGTGGCTGTTGCCACAGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CAA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAAGGAATGCAGATGATTaGCTCCCCACCCATCCACAG +
Preference number: 3 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTRNADD*LPTHPQ
Trigger: CTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCT...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CAA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGACACCCAACCAATGGGTaGAAAATGTTGCCAACAGAA +
Preference number: 3 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGHPTNG*KMLPTE
Trigger: TTCTGTTGGCAACATTTTCAACCCATTGGTTGGGTG...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CAA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAAGTGACCTCATCCCATaGGTCATCAGGAATGCAGAT +
Preference number: 3 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTSDLIP*VIRNAD
Trigger: ATCTGCATTCCTGATGACCAATGGGATGAGGTCACT...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR GCA 72 bp AGTTTAGAGTCCACATCAACACATCCTATTTGTATGTaGCCCCAAGGGAGAAAAAGCTACAGTATGTTAAAC +
Preference number: 3 (lower is better)
Translates to: SLESTSTHPICM*PQGRKSYSMLN
Trigger: GTTTAACATACTGTAGCTTTTTCTCCCTTGGGGGCACATACAAATAGGATGTGTTGATGTGGACTCTAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR-3UTR CAA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGAATGGGTTGAAAATGTaGCCAACAGAAGAGTCTTTG +
Preference number: 3 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKNGLKM*PTEESL
Trigger: CAAAGACTCTTCTGTTGGCAACATTTTCAACCCATT...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCGCGGCTGCTCCCGCTaGCTCCTCCGCGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFRGCSR*LLRASC
Trigger: GCATGACGCGCGGAGGAGGCAGCGGGAGCAGCCGCG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCCCGGCAGGAGGCAGTaGCATTGCCATTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSPGRRQ*HCHCSR
Trigger: CCTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCGGAGGAAGCCCGGCGTaGCCTCGATGTCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSGGSPA*PRCHLG
Trigger: TCCTAGGTGACATCGAGGGCACGCCGGGCTTCCTCC...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACCCATTCGGAAGAGGTaGCACGTACCCCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPPIRKR*HVPLPA
Trigger: CGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAACACACGTGATGGGCTaGATAGCTGACCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPTHVMG*IADPRP
Trigger: GGGGCGGGGGTCAGCTATGCAGCCCATCACGTGTGT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCGCTCAAAGCCTGCATTaGCGCCAGGAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSAQSLH*RQEGRS
Trigger: GGACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGC...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTGGAGGCAGGCCAGTGTaGAGGTGTGGGAGGAATCCG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGGGRPV*RCGRNP
Trigger: CGGATTCCTCCCACACCTTCACACTGGCCTGCCTCC...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCAAGAGTTCCTCCCATaGTTGCTGGGGCCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSQEFLP*LLGPLA
Trigger: GGCAAGCGGCCCCAGCAATCATGGGAGGAACTCTTG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACAAGAGTTCCTCCCATaGTTGCTGGGGCCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPQEFLP*LLGPLA
Trigger: GGCAAGCGGCCCCAGCAATCATGGGAGGAACTCTTG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTGGCGGTGGGGCTCCCTaGCCGGCTTCTCTCTGTATT +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGGGGAP*PASLCI
Trigger: AATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCC...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCCAGGGCTGGCTCTTTaGGGACCACTTCGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSPGLAL*GPLRSR
Trigger: TCGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCTGG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAGGGACCAGGAGGCTaGAAGAGCCCGCTCACATTC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPEGPGG*KSPLTF
Trigger: GAATGTGAGCGGGCTCTTCCAGCCTCCTGGTCCCTC...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCGATCTCCGTCGTGCTaGCCACTGTCACTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSRSPSC*PLSLGS
Trigger: ACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGGATGGGCTGCATAGCTaGCCCCCGCCCCTCGATCCC +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGDGLHS*PPPLDP
Trigger: GGGATCGAGGGGCGGGGGTCAGCTATGCAGCCCATC...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCGCGGCTGCTCCCGCTaGCTCCTCCGCGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTRGCSR*LLRASC
Trigger: GCATGACGCGCGGAGGAGGCAGCGGGAGCAGCCGCG...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACCAAGCCACCTTCTGTaGCCAAGGGGTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPPSHLL*PRGLPL
Trigger: CAAAGGGAGACCCCTTGGGCACAGAAGGTGGCTTGG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTCCGTGTCTCGGGACTaGTGGCCGGAGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPSVSRD*WPEDGS
Trigger: GGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTGTTCCGGGTGGGGGCTaGCATCTTTCCACAGGACAC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGVPGGG*HLSTGH
Trigger: GTGTCCTGTGGAAAGATGGCAGCCCCCACCCGGAAC...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTGCCTTCGCTGTGGGTaGGACGGTCTGGTTCACTCC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGCLRCG*DGLVHS
Trigger: GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAGCAGCTCTCCAGGTaGGTCGCATTGTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPEQLSR*VALFQA
Trigger: AGCCTGGAACAATGCGACCCACCTGGAGAGCTGCTC...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACATGTGCCTTCGCTGTaGGTGCGACGGTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPHVPSL*VRRSGS
Trigger: TGAACCAGACCGTCGCACCCACAGCGAAGGCACATG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATGTGACCTGCCCATTTaGAATCCCAGACCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPCDLPI*NPRPLP
Trigger: GGGGAGCGGTCTGGGATTCCAAATGGGCAGGTCACA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACTGGAGGTCACAGTATaGCTGCAGTGGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPLEVTV*LQWADT
Trigger: GGTGTCTGCCCACTGCAGCCATACTGTGACCTCCAG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAAGGCGGAAGTCTGGCTaGAGGTCACAGTATGGCTGC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPRRKSG*RSQYGC
Trigger: GCAGCCATACTGTGACCTCCAGCCAGACTTCCGCCT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCGATCTCCGTCGTGCTaGCCACTGTCACTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGRSPSC*PLSLGS
Trigger: ACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGGATGGGCTGCATAGCTaGCCCCCGCCCCTCGATCCC +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGDGLHS*PPPLDP
Trigger: GGGATCGAGGGGCGGGGGTCAGCTATGCAGCCCATC...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCGCGGCTGCTCCCGCTaGCTCCTCCGCGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPRGCSR*LLRASC
Trigger: GCATGACGCGCGGAGGAGGCAGCGGGAGCAGCCGCG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACAGTGCCATTGCCATTaGTCCAGGAGAGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPQCHCH*SRREQP
Trigger: AGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCCCGGCAGGAGGCAGTaGCATTGCCATTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPPGRRQ*HCHCSR
Trigger: CCTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGGGCCGTGTGTACTGTaGAGTGGAGTTGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPGPCVL*SGVGVP
Trigger: GGGGACCCCAACTCCACTGCACAGTACACACGGCCC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGACACACGTGATGGGCTaGATAGCTGACCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPTHVMG*IADPRP
Trigger: GGGGCGGGGGTCAGCTATGCAGCCCATCACGTGTGT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCTGCTGGCCGGAGGATaGGTCCACAGGTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGLLAGG*VHRSHE
Trigger: CTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGGGAACACCGTGGTCTaGCCAGGAGGTGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPGNTVV*PGGEME
Trigger: TTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCC...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCGGCTTAGGAGCTCCCTaGGATTTGCCACCCATCACA +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSGLGAP*DLPPIT
Trigger: TGTGATGGGTGGCAAATCCCAGGGAGCTCCTAAGCC...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTGGGTTGATGTTGTATTaGACCCCTGGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGGLMLY*TPGFRP
Trigger: GGGCCTGAAGCCAGGGGTTCAATACAACATCAACCC...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGACATCTGCAGAAGGGTaGCCAGCTTCCCCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPTSAEG*PASPVV
Trigger: CACCACCGGGGAAGCTGGTCACCCTTCTGCAGATGT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAATCGTGACCTTCGTGTaGCCTGCCCATTTGGAATCC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPIVTFV*PAHLES
Trigger: GGATTCCAAATGGGCAGGTCACACGAAGGTCACGAT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTAGGAGGCAGTGCCATTaGCATTGCTCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGRRQCH*HCSRRE
Trigger: CTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGGGCGGTGGGGCTCCCTaGCCGGCTTCTCTCTGTATT +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGGGGAP*PASLCI
Trigger: AATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCC...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCCACGTACCCCTCCCTaGGCAATCATCATCCACAAT +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSPRTPP*AIIIHN
Trigger: ATTGTGGATGATGATTGCGCAGGGAGGGGTACGTGG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACTGCTGGCCGGAGGATaGGTCCACAGGTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGLLAGG*VHRSHE
Trigger: CTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTGTGTCTCGGGACTGCTaGCCGGAGGATGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFVSRDC*PEDGST
Trigger: TGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACAC...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCTGAACTCTATGGCCTaGGGCTGTCCTTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGLNSMA*GCPSVP
Trigger: TGGCACAGAAGGACAGCCCCAGGCCATAGAGTTCAG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCCCGGAATCAGGCCCTaGAGAGTAATCGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSPGIRP*RVIALS
Trigger: TGACAAAGCGATTACTCTCCAGGGCCTGATTCCGGG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATTTGAGAACCAGGGCTaGCTCTTTGGGGACCACTTC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPFENQG*LFGDHF
Trigger: GAAGTGGTCCCCAAAGAGCCAGCCCTGGTTCTCAAA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCGCTTTGATGGGTCCGTaGCTGGCTTCAAATCCACTG +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSALMGP*LASNPL
Trigger: CAGTGGATTTGAAGCCAGCCACGGACCCATCAAAGC...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTAGTCCTGAGCCTGCTTaGAGGGCCAATACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGSPEPA*RANTPH
Trigger: GTGAGGAGTATTGGCCCTCCAAGCAGGCTCAGGACT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGTGGGTGCGACGGTCTaGTTCACTCCAGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPVGATV*FTPERL
Trigger: TAACCTTTCTGGAGTGAACCAGACCGTCGCACCCAC...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTGGTTTCGGACATATTaGAGGGGAGAGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGWFRTY*RGEGHS
Trigger: GCTGTGGCCCTCTCCCCTCCAATATGTCCGAAACCA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCGGCAACAGTTGCTACTaGAGGGTCAGGAATTGGACT +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSGNSCY*RVRNWT
Trigger: AGTCCAATTCCTGACCCTTCAGTAGCAACTGTTGCC...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAACGACTCGTTATCGCTaGCTTTCCAGATCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPTTRYR*LSRSGS
Trigger: TGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTAGGATCTGTACAGAATaGCTTCCGGCCAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGRICTE*LPARFQ
Trigger: CTGGAACCTGGCCGGAAGTCATTCTGTACAGATCCT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGACATCTGCAGAAGGGTaGCCAGCTTCCCCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGTSAEG*PASPVV
Trigger: CACCACCGGGGAAGCTGGTCACCCTTCTGCAGATGT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGAAGTGCCAGTGAGGTaGGGGGCGTGGCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVEVPVR*GAWQSQ
Trigger: CTGACTCTGCCACGCCCCTCACCTCACTGGCACTTC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACAATGTGGCTTCCCTaGTTCACACCTACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSTMWLP*FTPTEP
Trigger: TGGCTCAGTAGGTGTGAATCAGGGAAGCCACATTGT...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCTTCATACAGCACCCTaGGGACAATGTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGLHTAP*GQCGFP
Trigger: AGGGAAGCCACATTGTCCTCAGGGTGCTGTATGAAG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCGCGCGCCCTGGAACGTaGCCCGGACGCGCGAATCGG +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVARPGT*PGRANR
Trigger: CCGATTCGCGCGTCCGGGGCACGTTCCAGGGCGCGC...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGGCGCGCCCTGGAACGTaGCCCGGACGCGCGAATCGG +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQARPGT*PGRANR
Trigger: CCGATTCGCGCGTCCGGGGCACGTTCCAGGGCGCGC...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAACTAGGGGTGCCACCTaGGCACAGGATCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGTRGAT*AQDLAQ
Trigger: CTGGGCCAGATCCTGTGCGCAGGTGGCACCCCTAGT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGACTAGGGGTGCCACCTaGGCACAGGATCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRTRGAT*AQDLAQ
Trigger: CTGGGCCAGATCCTGTGCGCAGGTGGCACCCCTAGT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGGCGGTGGGGCTCCCTaGCCGGCTTCTCTCTGTATT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRGGGAP*PASLCI
Trigger: AATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAACGAGGGACTCATCATaGACAGGGGCGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVTRDSS*TGAVGL
Trigger: GAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGT...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCATCCGTGTCTCGGGACTaGTGGCCGGAGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSSVSRD*WPEDGS
Trigger: GGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGA...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATTCTGTGCCATTCGCTaGTTGGGAATAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPFCAIR*LGINGG
Trigger: GCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGGGAGGAAGCCCGGCGTaGCCTCGATGTCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGGGSPA*PRCHLG
Trigger: TCCTAGGTGACATCGAGGGCACGCCGGGCTTCCTCC...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAGGGCCGTGTGTACTGTaGAGTGGAGTTGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGGPCVL*SGVGVP
Trigger: GGGGACCCCAACTCCACTGCACAGTACACACGGCCC...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGGGCCGTGTGTACTGTaGAGTGGAGTTGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRGPCVL*SGVGVP
Trigger: GGGGACCCCAACTCCACTGCACAGTACACACGGCCC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCTCCAGCTCAAAGCCTaGATTGGCGCCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGLQLKA*IGARRA
Trigger: TGCCCTCCTGGCGCCAATGCAGGCTTTGAGCTGGAG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACCGTTCTATACTCAGTaGCATTCTCAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPPFYTQ*HSQRSS
Trigger: GCTGCTCCTCTGAGAATGGCACTGAGTATAGAACGG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGCGACATCGGGGCATGTaGCTTCGCTGTGGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGRHRGM*LRCGCD
Trigger: GTCGCACCCACAGCGAAGGCACATGCCCCGATGTCG...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCTTGGGAATAAACGGTaGCATTGTATCGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSLGNKR*HCIGCQ
Trigger: CTGGCACCCGATACAATGCCACCGTTTATTCCCAAG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCCAGGGCTGGCTCTTTaGGGACCACTTCGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFPGLAL*GPLRSR
Trigger: TCGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCTGG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTTTGAGAACCAGGGCTaGCTCTTTGGGGACCACTTC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGFENQG*LFGDHF
Trigger: GAAGTGGTCCCCAAAGAGCCAGCCCTGGTTCTCAAA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGCTCAAAGCCTGCATTaGCGCCAGGAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRAQSLH*RQEGRS
Trigger: GGACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTGCTTTGATGGGTCCGTaGCTGGCTTCAAATCCACTG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGALMGP*LASNPL
Trigger: CAGTGGATTTGAAGCCAGCCACGGACCCATCAAAGC...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAATGACACCTGGATCCTaGGGCAAGGAAACAGCATCT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPMTPGS*GKETAS
Trigger: AGATGCTGTTTCCTTGCCCCAGGATCCAGGTGTCAT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTAGAGACGAAAGCCAGTaGACTTTGGGGAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGRDESQ*TLGKEG
Trigger: TCCCTCCTTCCCCAAAGTCCACTGGCTTTCGTCTCT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGCCTTACCACCCCCACTaGCCCTGTCCCCAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRPYHPH*PCPQPF
Trigger: AAAGGGCTGGGGACAGGGCCAGTGGGGGTGGTAAGG...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACTGGACGTAAGCCTGTaGTGTTACACCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPLDVSL*CYTMVD
Trigger: ATCAACCATGGTGTAACATCACAGGCTTACGTCCAG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACCTTCCTCACACCCGTaGGGGCAACACGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGPSSHP*GQHGDQ
Trigger: CTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATCAGGCCCGAGATATTaGCCTGAAGTCTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPSGPRY*PEVLSL
Trigger: AAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACCGGCCAGGTTCCAGTaGCTTGATCCCATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGPARFQ*LDPIPY
Trigger: GTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCCAGGCTCCACTGCTaGCCTCCAGCTCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRSRLHC*PPAQSL
Trigger: CAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATCCAGGCTCCACTGCTaGCCTCCAGCTCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGSRLHC*PPAQSL
Trigger: CAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGACATCTGCAGAAGGGTaGCCAGCTTCCCCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRTSAEG*PASPVV
Trigger: CACCACCGGGGAAGCTGGTCACCCTTCTGCAGATGT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCATCTGAGTAGCGACTaGAGGACACATAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGHLSSD*RTHSSQ
Trigger: CTGAGAGCTATGTGTCCTTCAGTCGCTACTCAGATG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATCTTTCTCCAGAAGATaGAGCCTCCCACAGTCACAA +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPSFSRR*SLPQSQ
Trigger: TTGTGACTGTGGGAGGCTTCATCTTCTGGAGAAAGA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAACTGTCTCAGAGGGTaGCTCTCACTTGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSNCLRG*LSLVWI
Trigger: TATCCAGACAAGTGAGAGTCACCCTCTGAGACAGTT...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTGAAGTGCCAGTGAGGTaGGGGGCGTGGCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTEVPVR*GAWQSQ
Trigger: CTGACTCTGCCACGCCCCTCACCTCACTGGCACTTC...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGTGCAGAGAAGCATCGTaGCCTTCGTGTGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGCREAS*PSCDLP
Trigger: GGGCAGGTCACACGAAGGTCACGATGCTTCTCTGCA...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGACTAGGGGTGCCACCTaGGCACAGGATCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLTRGAT*AQDLAQ
Trigger: CTGGGCCAGATCCTGTGCGCAGGTGGCACCCCTAGT...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCAGTGCCATTGCCATTaGTCCAGGAGAGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPQCHCH*SRREQP
Trigger: AGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCCCGGCAGGAGGCAGTaGCATTGCCATTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLPGRRQ*HCHCSR
Trigger: CCTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGG...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGGGGCTGTCCTTCTGTaGCATTCGCTGCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPGAVLL*HSLLGN
Trigger: ATTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAATTCTGCATCATGGCTaGTCCATGCTAAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPILHHG*SMLSRS
Trigger: AGATCGGCTTAGCATGGAGCAGCCATGATGCAGAAT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATTCTGCATCATGGCTaGTCCATGCTAAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSILHHG*SMLSRS
Trigger: AGATCGGCTTAGCATGGAGCAGCCATGATGCAGAAT...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGACCCCAGCACTGCAATaGACCAGAATCGGCGATTCG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPTPALQ*TRIGDS
Trigger: CGAATCGCCGATTCTGGTGCATTGCAGTGCTGGGGT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTACGGAGATCAGAAACTaGGATCGGCTCTGTGATGAC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGTEIRN*DRLCDD
Trigger: GTCATCACAGAGCCGATCCCAGTTTCTGATCTCCGT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTCCGTTGAATGGGTCTaGACCGAAAGTTTGACACGG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGSVEWV*TESLTR
Trigger: CCGTGTCAAACTTTCGGTCCAGACCCATTCAACGGA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATGGTCTTTCCAAATGTaGTCACGGGCGCAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPWSFQM*SRAQGF
Trigger: AAAACCTTGCGCCCGTGACCACATTTGGAAAGACCA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGAGGGACCAGGAGGCTaGAAGAGCCCGCTCACATTC +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVEGPGG*KSPLTF
Trigger: GAATGTGAGCGGGCTCTTCCAGCCTCCTGGTCCCTC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTGGTTTCGGACATATTaGAGGGGAGAGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPWFRTY*RGEGHS
Trigger: GCTGTGGCCCTCTCCCCTCCAATATGTCCGAAACCA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCACCTTCCTCACACCCGTaGGGGCAACACGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSPSSHP*GQHGDQ
Trigger: CTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGG...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCCTTCCTCACACCCGTaGGGGCAACACGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLPSSHP*GQHGDQ
Trigger: CTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGG...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTCAGGCCCGAGATATTaGCCTGAAGTCTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGSGPRY*PEVLSL
Trigger: AAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGGACAGGACACACTGTaGTGTTGTAGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPGQDTL*CCRRCW
Trigger: CCAGCACCTTCTACAACATCACAGTGTGTCCTGTCC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGACATCTCCGTGGTGGTaGCGTAGACCACGTGGATGT +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGTSPWW*RRPRGC
Trigger: ACATCCACGTGGTCTACGTCACCACCACGGAGATGT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCTTCTGGAGAGATGGTaGTGTTATATAAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGLLERW*CYIRCP
Trigger: CGGGCACCTTATATAACATCACCATCTCTCCAGAAG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCAGGTTCCAGTGACTTaGTCCCATCCCCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPQVPVT*SHPLLV
Trigger: CACAAGTAGGGGATGGGATCAAGTCACTGGAACCTG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCCGGCCAGGTTCCAGTaGCTTGATCCCATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLPARFQ*LDPIPY
Trigger: GTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGG...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGAGGATCTGTACAGAATaGCTTCCGGCCAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPRICTE*LPARFQ
Trigger: CTGGAACCTGGCCGGAAGTCATTCTGTACAGATCCT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATCTGGACCGAAAGTTTaGCACGGGAAATATCATAGG +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPSGPKV*HGKYHR
Trigger: CCTATGATATTTCCCGTGTCAAACTTTCGGTCCAGA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTGGTCTGGCCAGGAGGTaGAATGGAACTGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFGLARR*NGTVSE
Trigger: CTCTGAGACAGTTCCATTTCACCTCCTGGCCAGACC...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCATCAGGAATGCAGATaGTTTGCTCCCCACCCATCC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPHQECR*FAPHPS
Trigger: GGATGGGTGGGGAGCAAATCATCTGCATTCCTGATG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGGAGGCAGGCCAGTGTaGAGGTGTGGGAGGAATCCG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPGGRPV*RCGRNP
Trigger: CGGATTCCTCCCACACCTTCACACTGGCCTGCCTCC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGACTTCTCTGTGGCAGTaGTGTGGGCAGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGTSLWQ*CGQSRA
Trigger: AGCCCTGCTCTGCCCACATCACTGCCACAGAGAAGT...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTGCAGAGAAGCATCGTaGCCTTCGTGTGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRCREAS*PSCDLP
Trigger: GGGCAGGTCACACGAAGGTCACGATGCTTCTCTGCA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTGGACTCTTCCAATTTaGGCTCATTGTTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGWTLPI*AHCSWE
Trigger: CTCCCAGGAACAATGAGCTCAAATTGGAAGAGTCCA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGAGGAGGCAGTGCCATTaGCATTGCTCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGRRQCH*HCSRRE
Trigger: CTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTCCGTGTCTCGGGACTaGTGGCCGGAGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTSVSRD*WPEDGS
Trigger: GGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGGAGGAAGCCCGGCGTaGCCTCGATGTCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPGGSPA*PRCHLG
Trigger: TCCTAGGTGACATCGAGGGCACGCCGGGCTTCCTCC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGCAAACTGTCCGAGATaGCCCTTCAGTCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPANCPR*PFSPIW
Trigger: CCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCTACTTGTGTTGCGTTaGTGGAATTTCCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSLLVLR*WNFQPS
Trigger: AGAAGGCTGGAAATTCCAGCAACGCAACACAAGTAG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGATTGCTGGGGCCGCTTaGCCATTTCCCAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRIAGAA*PFPKPT
Trigger: TGTGGGCTTGGGAAATGGGCAAGCGGCCCCAGCAAT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTAGTTCCTCCCATGATTaGTGGGGCCGCTTGCCCATT +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFSSSHD*WGRLPI
Trigger: AATGGGCAAGCGGCCCCAGCAATCATGGGAGGAACT...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTTGTCAAACACAGGACTaGGCCCAGTGCTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFCQTQD*AQCYWE
Trigger: CTCCCAGTAGCACTGGGCCCAGTCCTGTGTTTGACA...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTTCTCTCTGTATTGCTaGCATCCAAGCCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGFSLYC*HPSHLL
Trigger: CAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGTGTCTCGGGACTGCTaGCCGGAGGATGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPVSRDC*PEDGST
Trigger: TGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACAC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCTGAACTCTATGGCCTaGGGCTGTCCTTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFLNSMA*GCPSVP
Trigger: TGGCACAGAAGGACAGCCCCAGGCCATAGAGTTCAG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTAATGATTCTGCATCATaGCTGCTCCATGCTAAGCCG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGNDSAS*LLHAKP
Trigger: CGGCTTAGCATGGAGCAGCCATGATGCAGAATCATT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCCCGGAATCAGGCCCTaGAGAGTAATCGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPPGIRP*RVIALS
Trigger: TGACAAAGCGATTACTCTCCAGGGCCTGATTCCGGG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGCTGGCTCTTTaGGGACCACTTCGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTPGLAL*GPLRSR
Trigger: TCGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCTGG...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGGAGCAGCTCTCCAGGTaGGTCGCATTGTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGEQLSR*VALFQA
Trigger: AGCCTGGAACAATGCGACCCACCTGGAGAGCTGCTC...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTTGCAGGTGTTCCGGGTaGGGGCTGCCATCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTCRCSG*GLPSFH
Trigger: GTGGAAAGATGGCAGCCCCCACCCGGAACACCTGCA...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTCCACAGATGACACCTaGATCCTGGGGCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPSTDDT*ILGQGN
Trigger: GTTTCCTTGCCCCAGGATCCAGGTGTCATCTGTGGA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGAGTCCTGAGCCTGCTTaGAGGGCCAATACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGSPEPA*RANTPH
Trigger: GTGAGGAGTATTGGCCCTCCAAGCAGGCTCAGGACT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACATGTGCCTTCGCTGTaGGTGCGACGGTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVHVPSL*VRRSGS
Trigger: TGAACCAGACCGTCGCACCCACAGCGAAGGCACATG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTGTGACCTCATCCCATTaGTCATCAGGAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGVTSSH*SSGMQM
Trigger: CATCTGCATTCCTGATGACCAATGGGATGAGGTCAC...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATCCTCCCATGATTGCTaGGGCCGCTTGCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGSSHDC*GRLPIS
Trigger: GGAAATGGGCAAGCGGCCCCAGCAATCATGGGAGGA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGTGTGACCTGCCCATTTaGAATCCCAGACCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGCDLPI*NPRPLP
Trigger: GGGGAGCGGTCTGGGATTCCAAATGGGCAGGTCACA...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CAA 72 bp CCCCCGATTCCACTGGACTCTTCCAATTTGAGCTCATaGTTCCTGGGAGGGGTTGAAGCTCAGAGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PPIPLDSSNLSS*FLGGVEAQRHP
Trigger: AGGGTGCCTCTGAGCTTCAACCCCTCCCAGGAACAATGAGCTCAAATTGGAAGAGTCCAGTGGAATCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CAA 72 bp TGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTaGGCCCTTTCATTGACACCCAAACCCATACCAGCT +
Preference number: 4 (lower is better)
Translates to: WPKSPKPAGHQS*ALSLTPKPIPA
Trigger: AGCTGGTATGGGTTTGGGTGTCAATGAAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGGGTTGATGTTGTATTaGACCCCTGGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRGLMLY*TPGFRP
Trigger: GGGCCTGAAGCCAGGGGTTCAATACAACATCAACCC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGGGGTTGATGTTGTATTaGACCCCTGGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGGLMLY*TPGFRP
Trigger: GGGCCTGAAGCCAGGGGTTCAATACAACATCAACCC...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGTGACGTCAAAAACCTaGATAGCATTTGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPVTSKT*IAFVLN
Trigger: GTTCAGGACAAATGCTATTCAGGTTTTTGACGTCAC...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTGTAGGTATAGTTAGATaGCGACTCGTTATCGCTGAC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGVGIVR*RLVIAD
Trigger: GTCAGCGATAACGAGTCGTCATCTAACTATACCTAC...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCAGCTCCCTCCTGTGTaGTATGCATCTGAAATGATT +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGQLPPV*YASEMI
Trigger: AATCATTTCAGATGCATATCACACAGGAGGGAGCTG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAACATCTCCGTGGTGGTaGCGTAGACCACGTGGATGT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGTSPWW*RRPRGC
Trigger: ACATCCACGTGGTCTACGTCACCACCACGGAGATGT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCAGGTTCCAGTGACTTaGTCCCATCCCCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFQVPVT*SHPLLV
Trigger: CACAAGTAGGGGATGGGATCAAGTCACTGGAACCTG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAATAACCAAGTGTGGTTaGCTCATTCCCAACGTCAAT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPITKCG*LIPNVN
Trigger: ATTGACGTTGGGAATGAGTCAACCACACTTGGTTAT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACCAAAACACACTGATTaGGGAAAACATACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPPKHTD*GKHTGP
Trigger: AGGACCAGTATGTTTTCCTCAATCAGTGTGTTTTGG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCATCAGGAATGCAGATaGTTTGCTCCCCACCCATCC +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGHQECR*FAPHPS
Trigger: GGATGGGTGGGGAGCAAATCATCTGCATTCCTGATG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCATTATCGAAGTGCCAGTaGGGTGAGGGGCGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSLSKCQ*GEGRGR
Trigger: TCTGCCACGCCCCTCACCTCACTGGCACTTCGATAA...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGACAATGTGGCTTCCCTaGTTCACACCTACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPTMWLP*FTPTEP
Trigger: TGGCTCAGTAGGTGTGAATCAGGGAAGCCACATTGT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGACAGGGACCTATGAATaGAGTACCGACCGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRTGTYE*STDRSE
Trigger: CTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAACTTCTCTGTGGCAGTaGTGTGGGCAGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSTSLWQ*CGQSRA
Trigger: AGCCCTGCTCTGCCCACATCACTGCCACAGAGAAGT...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGCAGTGCCATTGCCATTaGTCCAGGAGAGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRQCHCH*SRREQP
Trigger: AGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTG...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAAGCCACCTTCTGTaGCCAAGGGGTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTPSHLL*PRGLPL
Trigger: CAAAGGGAGACCCCTTGGGCACAGAAGGTGGCTTGG...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCACGAGGGACTCATCATaGACAGGGGCGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTTRDSS*TGAVGL
Trigger: GAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAGGGGCTGTCCTTCTGTaGCATTCGCTGCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGGAVLL*HSLLGN
Trigger: ATTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCC...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGTGGATGTCAAACACTaGACTGGGAACAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPVDVKH*TGNSSI
Trigger: AATAGAACTGTTCCCAGTGCAGTGTTTGACATCCAC...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCTACTTGTGTTGCGTTaGTGGAATTTCCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGLLVLR*WNFQPS
Trigger: AGAAGGCTGGAAATTCCAGCAACGCAACACAAGTAG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCCGTTCTATACTCAGTaGCATTCTCAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPPFYTQ*HSQRSS
Trigger: GCTGCTCCTCTGAGAATGGCACTGAGTATAGAACGG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCCACGTACCCCTCCCTaGGCAATCATCATCCACAAT +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGPRTPP*AIIIHN
Trigger: ATTGTGGATGATGATTGCGCAGGGAGGGGTACGTGG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACACAGCCCACAGAACTaGTGCCTGAACAGGGACCTA +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVHSPQN*CLNRDL
Trigger: TAGGTCCCTGTTCAGGCAGCAGTTCTGTGGGCTGTG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGATTGCTGGGGCCGCTTaGCCATTTCCCAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLIAGAA*PFPKPT
Trigger: TGTGGGCTTGGGAAATGGGCAAGCGGCCCCAGCAAT...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCTTGGGAATAAACGGTaGCATTGTATCGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPLGNKR*HCIGCQ
Trigger: CTGGCACCCGATACAATGCCACCGTTTATTCCCAAG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGCTGAACTCTATGGCCTaGGGCTGTCCTTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGLNSMA*GCPSVP
Trigger: TGGCACAGAAGGACAGCCCCAGGCCATAGAGTTCAG...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCTTTCAAAGCAATACTTaGTTCCAGGGAACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSFQSNT*FQGTSH
Trigger: GTGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAA...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTGCAGGTGTTCCGGGTaGGGGCTGCCATCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPCRCSG*GLPSFH
Trigger: GTGGAAAGATGGCAGCCCCCACCCGGAACACCTGCA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCGTTCCATTCTGTTTATaGAAGGATTCTGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSVPFCL*KDSAVL
Trigger: CAGTACAGCAGAATCCTTTCATAAACAGAATGGAAC...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGTGTTTGTTTCCACCTaGGGTGTTCCAGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPVFVST*GVPVPF
Trigger: GAATGGAACTGGAACACCTCAGGTGGAAACAAACAC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCGAACTTGACCTTTACTaGATTGTGACTGACAGATGT +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSELDLY*IVTDRC
Trigger: ACATCTGTCAGTCACAATTCAGTAAAGGTCAAGTTC...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCTGTCACATAAGTATCTaGGGCTCCCTTTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSCHISI*GSLFEI
Trigger: GATTTCAAAAAGGGAGCCTCAGATACTTATGTGACA...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGGATGTAGTCATCCGTTaGATGGGTCTGGACCGAAAG +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGDVVIR*MGLDRK
Trigger: CTTTCGGTCCAGACCCATTCAACGGATGACTACATC...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTGGTCTGGCCAGGAGGTaGAATGGAACTGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTGLARR*NGTVSE
Trigger: CTCTGAGACAGTTCCATTTCACCTCCTGGCCAGACC...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGGACGATCAATGGCAATaGAAGTGCCCGTCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGDDQWQ*KCPSFR
Trigger: TCGGAAGGACGGGCACTTTCATTGCCATTGATCGTC...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGACGATCAATGGCAATaGAAGTGCCCGTCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRDDQWQ*KCPSFR
Trigger: TCGGAAGGACGGGCACTTTCATTGCCATTGATCGTC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTTATCGAAGTGCCAGTaGGGTGAGGGGCGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPLSKCQ*GEGRGR
Trigger: TCTGCCACGCCCCTCACCTCACTGGCACTTCGATAA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTGCAATTGTCAAAGACTaGACAGGGGTGCTCACACCA +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFAIVKD*TGVLTP
Trigger: TGGTGTGAGCACCCCTGTTCAGTCTTTGACAATTGC...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTAGGAGGCAGTGCCATTaGCATTGCTCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTRRQCH*HCSRRE
Trigger: CTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCT...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCTCCGTGTCTCGGGACTaGTGGCCGGAGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFSVSRD*WPEDGS
Trigger: GGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGA...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAATTCTCAGCCAGTTCTaGTGCATATTTAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPILSQF*CIFRLT
Trigger: AGTCAACCTAAATATGCAGCAGAACTGGCTGAGAAT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTACTGGTCCTCTGTCTaGACCATTAAAGGCCTATGC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPYWSSV*TIKGLC
Trigger: GCATAGGCCTTTAATGGTGCAGACAGAGGACCAGTA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGGAATGCAGATGATTTaGTCCCCACCCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRGMQMI*SPPIHS
Trigger: GCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCAAACCCATACCAGCTaGTTTTCTGTATGCAATTGT +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSQTHTS*FSVCNC
Trigger: ACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCTCATTGCCTATTCCTaGAGTGATGGAGAATACATA +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSLIAYS*SDGEYI
Trigger: TATGTATTCTCCATCACTCCAGGAATAGGCAATGAG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGAATGATTCTGCATCATaGCTGCTCCATGCTAAGCCG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPNDSAS*LLHAKP
Trigger: CGGCTTAGCATGGAGCAGCCATGATGCAGAATCATT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTCATACGTGCTTGTGTaGTTAGAGCCATGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPSYVLV*LEPCLD
Trigger: GTCCAAGCATGGCTCTAACCACACAAGCACGTATGA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTGTTGGACACATTGCTaGGCCGTGTGTACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRCWTHC*AVCTVQ
Trigger: CTGCACAGTACACACGGCCCAGCAATGTGTCCAACA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGGGCAGTAGGAGTACGTaGGAGAGGCGTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGGSRST*ERRHQS
Trigger: ACTTTGATGACGCCTCTCCCACGTACTCCTACTGCC...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGTTTGAGAACCAGGGCTaGCTCTTTGGGGACCACTTC +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGFENQG*LFGDHF
Trigger: GAAGTGGTCCCCAAAGAGCCAGCCCTGGTTCTCAAA...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGATGACACCTGGATCCTaGGGCAAGGAAACAGCATCT +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGMTPGS*GKETAS
Trigger: AGATGCTGTTTCCTTGCCCCAGGATCCAGGTGTCAT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACTGCGAACCCACAGTTaGAGTCAGCTTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGLRTHS*SQLAAS
Trigger: AGAAGCAGCAAGCTGACTCCAACTGTGGGTTCGCAG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGGTGGGTGCGACGGTCTaGTTCACTCCAGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGVGATV*FTPERL
Trigger: TAACCTTTCTGGAGTGAACCAGACCGTCGCACCCAC...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCAACAGAAGAGTCTTTaGAGAAAACTGGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGQQKSL*RKLGGK
Trigger: TTTCCCTCCCAGTTTTCTCCAAAGACTCTTCTGTTG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGAGAGACGAAAGCCAGTaGACTTTGGGGAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRRDESQ*TLGKEG
Trigger: TCCCTCCTTCCCCAAAGTCCACTGGCTTTCGTCTCT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGCCAGTGTGAAGGTGTaGGAGGAATCCGCCCACACC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTASVKV*EESAHT
Trigger: GGTGTGGGCGGATTCCTCCCACACCTTCACACTGGC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGGAGATCTGTATGAGTTaGAGGCAGGCCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGEICMS*RQASVK
Trigger: CTTCACACTGGCCTGCCTCCAACTCATACAGATCTC...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGGGCTTAGGAGCTCCCTaGGATTTGCCACCCATCACA +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLGLGAP*DLPPIT
Trigger: TGTGATGGGTGGCAAATCCCAGGGAGCTCCTAAGCC...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCAGGCGGAAGTCTGGCTaGAGGTCACAGTATGGCTGC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPRRKSG*RSQYGC
Trigger: GCAGCCATACTGTGACCTCCAGCCAGACTTCCGCCT...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGGCAACAGTTGCTACTaGAGGGTCAGGAATTGGACT +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVGNSCY*RVRNWT
Trigger: AGTCCAATTCCTGACCCTTCAGTAGCAACTGTTGCC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTATGTTACACCATGGTTaGTGCACAACAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGMLHHG*CTTVIV
Trigger: GACAATTACTGTTGTGCATCAACCATGGTGTAACAT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGATTGACCTGAAGTCTTaGGTCTTGAGTCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPIDLKS*VLSQLL
Trigger: GAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAAT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCAGCTCCCTCCTGTGTaGTATGCATCTGAAATGATT +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPQLPPV*YASEMI
Trigger: AATCATTTCAGATGCATATCACACAGGAGGGAGCTG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAACATCTCCGTGGTGGTaGCGTAGACCACGTGGATGT +
Preference number: 4 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQTSPWW*RRPRGC
Trigger: ACATCCACGTGGTCTACGTCACCACCACGGAGATGT...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCTTCTGGAGAGATGGTaGTGTTATATAAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGLLERW*CYIRCP
Trigger: CGGGCACCTTATATAACATCACCATCTCTCCAGAAG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGACTTCAGACAAGCTCTaGGAACGTCCCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPTSDKL*ERPFSS
Trigger: AGAAGAAAAGGGACGTTCTCAGAGCTTGTCTGAAGT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGATGTAGTCATCCGTTaGATGGGTCTGGACCGAAAG +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVDVVIR*MGLDRK
Trigger: CTTTCGGTCCAGACCCATTCAACGGATGACTACATC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGGTCTGGCCAGGAGGTaGAATGGAACTGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPGLARR*NGTVSE
Trigger: CTCTGAGACAGTTCCATTTCACCTCCTGGCCAGACC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAGACGATCAATGGCAATaGAAGTGCCCGTCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSDDQWQ*KCPSFR
Trigger: TCGGAAGGACGGGCACTTTCATTGCCATTGATCGTC...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAATATCCAAAACACACTaGTTGAGGAAAACATACTGG +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPISKTH*LRKTYW
Trigger: CCAGTATGTTTTCCTCAATCAGTGTGTTTTGGATAT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGACACTGAATTCACGCTaGAGTGTTCACAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPTLNSR*SVHRLP
Trigger: TGGCAATCTGTGAACACTTCAGCGTGAATTCAGTGT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCACAGGGACCTATGAATaGAGTACCGACCGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPTGTYE*STDRSE
Trigger: CTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGT...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCACTGAACAGGGACCTATaGATGAAGTACCGACCGCTC +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSLNRDL*MKYRPL
Trigger: GAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAG...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAATCGTGACCTTCGTGTaGCCTGCCCATTTGGAATCC +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSIVTFV*PAHLES
Trigger: GGATTCCAAATGGGCAGGTCACACGAAGGTCACGAT...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACTTTGGCCCTTTCATTaGCACCCAAACCCATACCAG +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVLWPFH*HPNPYQ
Trigger: CTGGTATGGGTTTGGGTGTCAATGAAAGGGCCAAAG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCCCCGGCAGGAGGCAGTaGCATTGCCATTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFPGRRQ*HCHCSR
Trigger: CCTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGG...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACCTCATGGCTTCCAATaGTTTCAAGAAGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGPHGFQ*FQEEPG
Trigger: GCCGGGTTCTTCTTGAAAGCATTGGAAGCCATGAGG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCAAGCCACCTTCTGTaGCCAAGGGGTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTPSHLL*PRGLPL
Trigger: CAAAGGGAGACCCCTTGGGCACAGAAGGTGGCTTGG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAGGCTTCTCTCTGTATTaGTGGCATCCAAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGGFSLY*WHPSHL
Trigger: AAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCC...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGGCTTCTCTCTGTATTaGTGGCATCCAAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRGFSLY*WHPSHL
Trigger: AAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATTCTGTGCCATTCGCTaGTTGGGAATAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGFCAIR*LGINGG
Trigger: GCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGATTCTGCATCATGGCTaGTCCATGCTAAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGILHHG*SMLSRS
Trigger: AGATCGGCTTAGCATGGAGCAGCCATGATGCAGAAT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAGCAAACTGTCCGAGATaGCCCTTCAGTCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSANCPR*PFSPIW
Trigger: CCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGC...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCTCAGCCAGTTCTGCTaGATATTTAGGTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGLSQFC*IFRLTN
Trigger: ATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTTACTGGTCCTCTGTCTaGACCATTAAAGGCCTATGC +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFYWSSV*TIKGLC
Trigger: GCATAGGCCTTTAATGGTGCAGACAGAGGACCAGTA...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCTGCCTTCGCTGTGGGTaGGACGGTCTGGTTCACTCC +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVCLRCG*DGLVHS
Trigger: GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCA...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAGGAATGCAGATGATTTaGTCCCCACCCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSGMQMI*SPPIHS
Trigger: GCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCC...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAATCTCTACTGAGTTTTaGCTGTGGAAGCATAATTCA +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPISTEF*LWKHNS
Trigger: TGAATTATGCTTCCACAGGCAAAACTCAGTAGAGAT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAACACAGCCCACAGAACTaGTGCCTGAACAGGGACCTA +
Preference number: 4 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQHSPQN*CLNRDL
Trigger: TAGGTCCCTGTTCAGGCAGCAGTTCTGTGGGCTGTG...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGAGCTCCCTGGGATTTaGCACCCATCACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRELPGI*HPSQWF
Trigger: AAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATGTGATGTTACACCATaGTTGATGCACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: VDIGACAFAVGATVWFTPCDVTP*LMHNSN
Trigger: ATTACTGTTGTGCATCAACCATGGTGTAACATCACA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGTTCTCTCTGTATTGCTaGCATCCAAGCCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGFSLYC*HPSHLL
Trigger: CAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAA...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGAGCAGCTCTCCAGGTaGGTCGCATTGTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTEQLSR*VALFQA
Trigger: AGCCTGGAACAATGCGACCCACCTGGAGAGCTGCTC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAATTAGGGGATCCATCTaGAGGAGGGGGATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVIRGSI*RRGICD
Trigger: ATCACAGATCCCCCTCCTCCAGATGGATCCCCTAAT...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAATTAGGGGATCCATCTaGAGGAGGGGGATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGIRGSI*RRGICD
Trigger: ATCACAGATCCCCCTCCTCCAGATGGATCCCCTAAT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCACTGCGAACCCACAGTTaGAGTCAGCTTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSLRTHS*SQLAAS
Trigger: AGAAGCAGCAAGCTGACTCCAACTGTGGGTTCGCAG...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCCGTTGAATGGGTCTaGACCGAAAGTTTGACACGG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRSVEWV*TESLTR
Trigger: CCGTGTCAAACTTTCGGTCCAGACCCATTCAACGGA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGTGTCGGGAACACCGTaGTCTGGCCAGGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTVSGTP*SGQEVK
Trigger: TTTCACCTCCTGGCCAGACCACGGTGTTCCCGACAC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGGTGGGTGCGACGGTCTaGTTCACTCCAGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLVGATV*FTPERL
Trigger: TAACCTTTCTGGAGTGAACCAGACCGTCGCACCCAC...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCGCCAGTGTGAAGGTGTaGGAGGAATCCGCCCACACC +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVASVKV*EESAHT
Trigger: GGTGTGGGCGGATTCCTCCCACACCTTCACACTGGC...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGAGATCTGTATGAGTTaGAGGCAGGCCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRREICMS*RQASVK
Trigger: CTTCACACTGGCCTGCCTCCAACTCATACAGATCTC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGGGAGATGCTATCAATaGCCCAAATCCCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRGRCYQ*PKSPKP
Trigger: TGGTTTGGGGGATTTGGGCCATTGATAGCATCTCCC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCCCTTCCTCACACCCGTaGGGGCAACACGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFPSSHP*GQHGDQ
Trigger: CTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGG...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGATTGACCTGAAGTCTTaGGTCTTGAGTCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGIDLKS*VLSQLL
Trigger: GAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAAT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCAGGCCCGAGATATTaGCCTGAAGTCTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRSGPRY*PEVLSL
Trigger: AAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAACGACTCGTTATCGCTaGCTTTCCAGATCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSTTRYR*LSRSGS
Trigger: TGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGT...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGATATGCATCTGAAATaGTTCTGCATCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPDMHLK*FCIMAA
Trigger: AGCAGCCATGATGCAGAATCATTTCAGATGCATATC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACTTCTGGAGAGATGGTaGTGTTATATAAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGLLERW*CYIRCP
Trigger: CGGGCACCTTATATAACATCACCATCTCTCCAGAAG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGTCTTTCTCCAGAAGATaGAGCCTCCCACAGTCACAA +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGSFSRR*SLPQSQ
Trigger: TTGTGACTGTGGGAGGCTTCATCTTCTGGAGAAAGA...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCAGCTTGCTGCTTCTTaGAGTAGGCCTCAAAATTCT +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGQLAAS*SRPQNS
Trigger: AGAATTTTGAGGCCTACTTCAAGAAGCAGCAAGCTG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTTCTGGACCGAAAGTTTaGCACGGGAAATATCATAGG +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFSGPKV*HGKYHR
Trigger: CCTATGATATTTCCCGTGTCAAACTTTCGGTCCAGA...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAAACTGTCTCAGAGGGTaGCTCTCACTTGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVNCLRG*LSLVWI
Trigger: TATCCAGACAAGTGAGAGTCACCCTCTGAGACAGTT...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGAGATTGCCACGCTTCTaGACATACACACACACATAC +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGRLPRF*TYTHTY
Trigger: GTATGTGTGTGTGTATGTTCAGAAGCGTGGCAATCT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGGCAATTGTCAAAGACTaGACAGGGGTGCTCACACCA +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLAIVKD*TGVLTP
Trigger: TGGTGTGAGCACCCCTGTTCAGTCTTTGACAATTGC...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCCAAGCCACCTTCTGTaGCCAAGGGGTCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQPSHLL*PRGLPL
Trigger: CAAAGGGAGACCCCTTGGGCACAGAAGGTGGCTTGG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTGGCATTGTATCGGGTaGCAGGCTCTAACCCGACAA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPWHCIG*QALTRQ
Trigger: TTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGCAAACTGTCCGAGATaGCCCTTCAGTCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPANCPR*PFSPIW
Trigger: CCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTGGGAACAGTTCTATTaGAAACTGTCCGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRWEQFY*KLSEMP
Trigger: GGGCATCTCGGACAGTTTGCAATAGAACTGTTCCCA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGCTACTTGTGTTGCGTTaGTGGAATTTCCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGLLVLR*WNFQPS
Trigger: AGAAGGCTGGAAATTCCAGCAACGCAACACAAGTAG...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACCCATCCCCTACTTGTaGAAAGATCTCCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGPIPYL*KDLHCV
Trigger: TACACAGTGGAGATCTTTGCACAAGTAGGGGATGGG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCACCCCAGCACTGCAATaGACCAGAATCGGCGATTCG +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTTPALQ*TRIGDS
Trigger: CGAATCGCCGATTCTGGTGCATTGCAGTGCTGGGGT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCTTCATAGATTGTCATTaGAGTTGTGTTCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSFIDCH*SCVLVD
Trigger: ATCTACCAGAACACAACTGCAATGACAATCTATGAA...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTACTGTAGGATTCCTCTaGTTCTCCCATTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTTVGFL*FSHSHP
Trigger: TGGGTGGGAATGGGAGAAGCAGAGGAATCCTACAGT...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAGACCTTCGTGTGACCTaGCCATTTGGAATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQDLRVT*PFGIPD
Trigger: GTCTGGGATTCCAAATGGGCAGGTCACACGAAGGTC...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCATCCTATTTGTATGTaGCCCCAAGGGAGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFHPICM*PQGRKS
Trigger: GCTTTTTCTCCCTTGGGGGCACATACAAATAGGATG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAACGGAGATCAGAAACTaGGATCGGCTCTGTGATGAC +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSTEIRN*DRLCDD
Trigger: GTCATCACAGAGCCGATCCCAGTTTCTGATCTCCGT...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCACTGCTGGCCGGAGGATaGGTCCACAGGTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPLLAGG*VHRSHE
Trigger: CTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAG...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATCATACGTGCTTGTGTaGTTAGAGCCATGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGSYVLV*LEPCLD
Trigger: GTCCAAGCATGGCTCTAACCACACAAGCACGTATGA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCCCGGAATCAGGCCCTaGAGAGTAATCGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPPGIRP*RVIALS
Trigger: TGACAAAGCGATTACTCTCCAGGGCCTGATTCCGGG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGGCAGTAGGAGTACGTaGGAGAGGCGTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPGSRST*ERRHQS
Trigger: ACTTTGATGACGCCTCTCCCACGTACTCCTACTGCC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCAGTCGAAGGAGGCCATaGACGCAGGATCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPSRRRP*TQDLYR
Trigger: TCTGTACAGATCCTGCGTCCATGGCCTCCTTCGACT...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCTGCGAACCCACAGTTaGAGTCAGCTTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPLRTHS*SQLAAS
Trigger: AGAAGCAGCAAGCTGACTCCAACTGTGGGTTCGCAG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGGGAACACCGTGGTCTaGCCAGGAGGTGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTGNTVV*PGGEME
Trigger: TTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGTGGTCTTTCCAAATGTaGTCACGGGCGCAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGWSFQM*SRAQGF
Trigger: AAAACCTTGCGCCCGTGACCACATTTGGAAAGACCA...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATGGTCTTTCCAAATGTaGTCACGGGCGCAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGWSFQM*SRAQGF
Trigger: AAAACCTTGCGCCCGTGACCACATTTGGAAAGACCA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGTGACCTCATCCCATTaGTCATCAGGAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRVTSSH*SSGMQM
Trigger: CATCTGCATTCCTGATGACCAATGGGATGAGGTCAC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGAGGACTCCAGGGACTTaGTTATTCCTTCATAAAACC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPRTPGT*LFLHKT
Trigger: GGTTTTATGAAGGAATAACCAAGTCCCTGGAGTCCT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCTCCTCCCATGATTGCTaGGGCCGCTTGCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVSSHDC*GRLPIS
Trigger: GGAAATGGGCAAGCGGCCCCAGCAATCATGGGAGGA...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGACAGTATGGCTGCAGTaGGCAGACACCAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRTVWLQ*ADTKCH
Trigger: ATGACATTTGGTGTCTGCCCACTGCAGCCATACTGT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGGTGTTTGTTTCCACCTaGGGTGTTCCAGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLVFVST*GVPVPF
Trigger: GAATGGAACTGGAACACCTCAGGTGGAAACAAACAC...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAATTGACCTGAAGTCTTaGGTCTTGAGTCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGIDLKS*VLSQLL
Trigger: GAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAAT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGTAGAAGATACGGGTTaGTGTTGTATTGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVVEDTG*CCIEPL
Trigger: CAGGGGTTCAATACAACATCAACCCGTATCTTCTAC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGTAGAAGATACGGGTTaGTGTTGTATTGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRVEDTG*CCIEPL
Trigger: CAGGGGTTCAATACAACATCAACCCGTATCTTCTAC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCCGATCTCCGTCGTGCTaGCCACTGTCACTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFRSPSC*PLSLGS
Trigger: ACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCG...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTGTGTGATATGCATCTaGAATGATTCTGCATCATGG +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPCVICI*NDSASW
Trigger: CCATGATGCAGAATCATTTCAGATGCATATCACACA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACAGCTCCCTCCTGTGTaGTATGCATCTGAAATGATT +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVQLPPV*YASEMI
Trigger: AATCATTTCAGATGCATATCACACAGGAGGGAGCTG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCATGCTTGGACTCTATaGCTAAATGGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPHAWTL*LNGRHT
Trigger: AGTATGTCTACCATTTAGTCATAGAGTCCAAGCATG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAACTTCAGACAAGCTCTaGGAACGTCCCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVTSDKL*ERPFSS
Trigger: AGAAGAAAAGGGACGTTCTCAGAGCTTGTCTGAAGT...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAACTTCAGACAAGCTCTaGGAACGTCCCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGTSDKL*ERPFSS
Trigger: AGAAGAAAAGGGACGTTCTCAGAGCTTGTCTGAAGT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTATAACCAAGTGTGGTTaGCTCATTCCCAACGTCAAT +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFITKCG*LIPNVN
Trigger: ATTGACGTTGGGAATGAGTCAACCACACTTGGTTAT...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTGCATGTAGTTGGCATTaGTGTAGTCATCCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFACSWH*CSHPLN
Trigger: ATTCAACGGATGACTACATCAATGCCAACTACATGC...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGATAAGATCTACTTTTaGGTCTTTCTGGGATCTGAC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPDKIYF*VFLGSD
Trigger: GTCAGATCCCAGAAAGACTCAAAAGTAGATCTTATC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCAGGAATGCAGATaGTTTGCTCCCCACCCATCC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTHQECR*FAPHPS
Trigger: GGATGGGTGGGGAGCAAATCATCTGCATTCCTGATG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGACACTGAATTCACGCTaGAGTGTTCACAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRTLNSR*SVHRLP
Trigger: TGGCAATCTGTGAACACTTCAGCGTGAATTCAGTGT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCTTTGGCCCTTTCATTaGCACCCAAACCCATACCAG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPLWPFH*HPNPYQ
Trigger: CTGGTATGGGTTTGGGTGTCAATGAAAGGGCCAAAG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGATTTCCTGCTGGTGCTaGTCATCACTAGATCCAACT +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGISCWC*SSLDPT
Trigger: AGTTGGATCTAGTGATGATCAGCACCAGCAGGAAAT...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAACTAGGGGTGCCACCTaGGCACAGGATCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPTRGAT*AQDLAQ
Trigger: CTGGGCCAGATCCTGTGCGCAGGTGGCACCCCTAGT...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCCTCATGGCTTCCAATaGTTTCAAGAAGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPPHGFQ*FQEEPG
Trigger: GCCGGGTTCTTCTTGAAAGCATTGGAAGCCATGAGG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGGCGGTGGGGCTCCCTaGCCGGCTTCTCTCTGTATT +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIGGGAP*PASLCI
Trigger: AATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAACGAGGGACTCATCATaGACAGGGGCGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPTRDSS*TGAVGL
Trigger: GAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGT...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGGAGGAAGCCCGGCGTaGCCTCGATGTCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIGGSPA*PRCHLG
Trigger: TCCTAGGTGACATCGAGGGCACGCCGGGCTTCCTCC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTTGGGAACAGTTCTATTaGAAACTGTCCGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTWEQFY*KLSEMP
Trigger: GGGCATCTCGGACAGTTTGCAATAGAACTGTTCCCA...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCAATGTTGGACACATTaGTGGGCCGTGTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPQCWTH*WAVCTV
Trigger: CACAGTACACACGGCCCAGCAATGTGTCCAACATTG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCGTGACTACTTGTGTTaGGTTGCTGGAATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTRDYLC*VAGISS
Trigger: GCTGGAAATTCCAGCAACGCAACACAAGTAGTCACG...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGGTATTTCAGGACATCTaGAGAAGGGTGACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLVFQDI*RRVTSF
Trigger: GAAGCTGGTCACCCTTCTGCAGATGTCCTGAAATAC...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGCATCCTATTTGTATGTaGCCCCAAGGGAGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGHPICM*PQGRKS
Trigger: GCTTTTTCTCCCTTGGGGGCACATACAAATAGGATG...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAGTGTCTCGGGACTGCTaGCCGGAGGATGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPVSRDC*PEDGST
Trigger: TGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACAC...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCTGAACTCTATGGCCTaGGGCTGTCCTTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQLNSMA*GCPSVP
Trigger: TGGCACAGAAGGACAGCCCCAGGCCATAGAGTTCAG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCCAATGATAATACTTTaGTTGGTGGTTATTTCTACC +
Preference number: 4 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGPMIIL*LVVIST
Trigger: GGTAGAAATAACCACCAACCAAAGTATTATCATTGG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGACGTGGTCCACTTCTaGAGAGATGGTGATGTTATA +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVDVVHF*RDGDVI
Trigger: TATAACATCACCATCTCTCCAGAAGTGGACCACGTC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGACGTGGTCCACTTCTaGAGAGATGGTGATGTTATA +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRDVVHF*RDGDVI
Trigger: TATAACATCACCATCTCTCCAGAAGTGGACCACGTC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATACTTACATCAATGTTaGACACATTGCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGYLHQC*THCWAV
Trigger: CACGGCCCAGCAATGTGTCCAACATTGATGTAAGTA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGCTTTGATGGGTCCGTaGCTGGCTTCAAATCCACTG +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTALMGP*LASNPL
Trigger: CAGTGGATTTGAAGCCAGCCACGGACCCATCAAAGC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTCCACAGATGACACCTaGATCCTGGGGCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTSTDDT*ILGQGN
Trigger: GTTTCCTTGCCCCAGGATCCAGGTGTCATCTGTGGA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGAATACTCCTCACATTTaGTTCTTCCCTGTTCAACAC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPNTPHI*FFPVQH
Trigger: GTGTTGAACAGGGAAGAACCAAATGTGAGGAGTATT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAGTGACCTCATCCCATTaGTCATCAGGAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSVTSSH*SSGMQM
Trigger: CATCTGCATTCCTGATGACCAATGGGATGAGGTCAC...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGACCTTACCACCCCCACTaGCCCTGTCCCCAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGPYHPH*PCPQPF
Trigger: AAAGGGCTGGGGACAGGGCCAGTGGGGGTGGTAAGG...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAAAAAGTCGTTGTTCCTaGGAGATGCTATCAATGGCC +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVKSRCS*EMLSMA
Trigger: GGCCATTGATAGCATCTCCCAGGAACAACGACTTTT...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTACAGTATGGCTGCAGTaGGCAGACACCAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTTVWLQ*ADTKCH
Trigger: ATGACATTTGGTGTCTGCCCACTGCAGCCATACTGT...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CAA 72 bp CACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATaGTCAAAGACTGAACAGGGGTGCTCACACCATCCC +
Preference number: 4 (lower is better)
Translates to: HPNPYQLLFCMQ*SKTEQGCSHHP
Trigger: GGGATGGTGTGAGCACCCCTGTTCAGTCTTTGACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGGCAACAGTTGCTACTaGAGGGTCAGGAATTGGACT +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTGNSCY*RVRNWT
Trigger: AGTCCAATTCCTGACCCTTCAGTAGCAACTGTTGCC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGTGTTTGTTTCCACCTaGGGTGTTCCAGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPVFVST*GVPVPF
Trigger: GAATGGAACTGGAACACCTCAGGTGGAAACAAACAC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCTGGACGTAAGCCTGTaGTGTTACACCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPLDVSL*CYTMVD
Trigger: ATCAACCATGGTGTAACATCACAGGCTTACGTCCAG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTATGCCTATTCCTGGAGTaGTGGAGAATACATATGAAG +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVCLFLE*WRIHMK
Trigger: CTTCATATGTATTCTCCATCACTCCAGGAATAGGCA...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGGGACAGGACACACTGTaGTGTTGTAGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQGQDTL*CCRRCW
Trigger: CCAGCACCTTCTACAACATCACAGTGTGTCCTGTCC...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTTGTGTGATATGCATCTaGAATGATTCTGCATCATGG +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFCVICI*NDSASW
Trigger: CCATGATGCAGAATCATTTCAGATGCATATCACACA...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGCTGAGGCTCCCTTTTTaGAATCCTCATACGTGTATT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRLRLPF*NPHTCI
Trigger: AATACACGTATGAGGATTTCAAAAAGGGAGCCTCAG...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTCTTTCTCCAGAAGATaGAGCCTCCCACAGTCACAA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPSFSRR*SLPQSQ
Trigger: TTGTGACTGTGGGAGGCTTCATCTTCTGGAGAAAGA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGGCTGCATATTTAGGTTaGCTAATTCCAACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGAAYLG*LIPTSF
Trigger: GAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGC...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGATGTAGTCATCCGTTaGATGGGTCTGGACCGAAAG +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTDVVIR*MGLDRK
Trigger: CTTTCGGTCCAGACCCATTCAACGGATGACTACATC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGCATGTAGTTGGCATTaGTGTAGTCATCCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRACSWH*CSHPLN
Trigger: ATTCAACGGATGACTACATCAATGCCAACTACATGC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAACCCAACCAATGGGTTaGAAATGTTGCCAACAGAAG +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSTQPMG*KCCQQK
Trigger: CTTCTGTTGGCAACATTTTCAACCCATTGGTTGGGT...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCATCTCAAGGTGATATTTaGGTCGCCATTCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSSQGDI*VAILTQ
Trigger: TTGGGTGAGAATGGCGACTCAAATATCACCTTGAGA...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTATTTCCTGCTGGTGCTaGTCATCACTAGATCCAACT +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTISCWC*SSLDPT
Trigger: AGTTGGATCTAGTGATGATCAGCACCAGCAGGAAAT...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTACCCCCGGGAGCCTCTaGCTCAACAGAGCACAAATC +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFTPGSL*LNRAQI
Trigger: GATTTGTGCTCTGTTGAGTCAGAGGCTCCCGGGGGT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGTTTATGAAAGGATTCTaGTGTACTGCTGATCTGCGT +
Preference number: 4 (lower is better)
Translates to: GAPWDLPPITMVSDILEGFMKGF*CTADLR
Trigger: ACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAA...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGTGGCATTGTATCGGGTaGCAGGCTCTAACCCGACAA +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQWHCIG*QALTRQ
Trigger: TTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCA...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGTGGATGTCAAACACTaGACTGGGAACAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVVDVKH*TGNSSI
Trigger: AATAGAACTGTTCCCAGTGCAGTGTTTGACATCCAC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCGTGACTACTTGTGTTaGGTTGCTGGAATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPRDYLC*VAGISS
Trigger: GCTGGAAATTCCAGCAACGCAACACAAGTAGTCACG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCCCATCCCCTACTTGTaGAAAGATCTCCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPPIPYL*KDLHCV
Trigger: TACACAGTGGAGATCTTTGCACAAGTAGGGGATGGG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGTATTTCAGGACATCTaGAGAAGGGTGACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPVFQDI*RRVTSF
Trigger: GAAGCTGGTCACCCTTCTGCAGATGTCCTGAAATAC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCGGAATGCAGATGATTTaGTCCCCACCCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVGMQMI*SPPIHS
Trigger: GCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCC...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGCCCATTCGGAAGAGGTaGCACGTACCCCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKPIRKR*HVPLPA
Trigger: CGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGG...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGAGGCTGGTGCTAGTCTaGAACTGTTGGGCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQRLVLV*NCWAKQ
Trigger: TTGCTTGGCCCAACAGTTGCAGACTAGCACCAGCCT...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTTCTCTCTGTATTGCTaGCATCCAAGCCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPFSLYC*HPSHLL
Trigger: CAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCTGCTGGCCGGAGGATaGGTCCACAGGTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNLLAGG*VHRSHE
Trigger: CTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGCCCTTCAGTCCCATTTaGTCCTTTTGGAACTATTTC +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRPFSPI*SFWNYF
Trigger: GAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGG...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTTAAAGTTGCTGCTGTaGTGTTGGTACTTACATCAA +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPLKLLL*CWYLHQ
Trigger: TTGATGTAAGTACCAACACCACAGCAGCAACTTTAA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCAGTCGAAGGAGGCCATaGACGCAGGATCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVSRRRP*TQDLYR
Trigger: TCTGTACAGATCCTGCGTCCATGGCCTCCTTCGACT...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCATGACACCTGGATCCTaGGGCAAGGAAACAGCATCT +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTMTPGS*GKETAS
Trigger: AGATGCTGTTTCCTTGCCCCAGGATCCAGGTGTCAT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGCAACAGAAGAGTCTTTaGAGAAAACTGGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGQQKSL*RKLGGK
Trigger: TTTCCCTCCCAGTTTTCTCCAAAGACTCTTCTGTTG...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAATGCCACCCATCACAATaGTTTCGGACATATTGGAGG +
Preference number: 4 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQCHPSQ*FRTYWR
Trigger: CCTCCAATATGTCCGAAACCATTGTGATGGGTGGCA...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCTAGTCTGCAACTGTTaGGCCAAGCAATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQLVCNC*AKQSSC
Trigger: GCAGGAGGATTGCTTGGCCCAACAGTTGCAGACTAG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGTTCCATTCTGTTTATaGAAGGATTCTGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVVPFCL*KDSAVL
Trigger: CAGTACAGCAGAATCCTTTCATAAACAGAATGGAAC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGTGCCTATTCCTGGAGTaGTGGAGAATACATATGAAG +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLCLFLE*WRIHMK
Trigger: CTTCATATGTATTCTCCATCACTCCAGGAATAGGCA...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGTAGAAGATACGGGTTaGTGTTGTATTGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPVEDTG*CCIEPL
Trigger: CAGGGGTTCAATACAACATCAACCCGTATCTTCTAC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTGTGACGTCAAAAACCTaGATAGCATTTGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTVTSKT*IAFVLN
Trigger: GTTCAGGACAAATGCTATTCAGGTTTTTGACGTCAC...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGACGATCTCCGTCGTGCTaGCCACTGTCACTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGRSPSC*PLSLGS
Trigger: ACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCG...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTGTGTGATATGCATCTaGAATGATTCTGCATCATGG +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRCVICI*NDSASW
Trigger: CCATGATGCAGAATCATTTCAGATGCATATCACACA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGCATGCTTGGACTCTATaGCTAAATGGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRHAWTL*LNGRHT
Trigger: AGTATGTCTACCATTTAGTCATAGAGTCCAAGCATG...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGAACTTGACCTTTACTaGATTGTGACTGACAGATGT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRELDLY*IVTDRC
Trigger: ACATCTGTCAGTCACAATTCAGTAAAGGTCAAGTTC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCTGAGGCTCCCTTTTTaGAATCCTCATACGTGTATT +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTLRLPF*NPHTCI
Trigger: AATACACGTATGAGGATTTCAAAAAGGGAGCCTCAG...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTATGTCACATAAGTATCTaGGGCTCCCTTTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVCHISI*GSLFEI
Trigger: GATTTCAAAAAGGGAGCCTCAGATACTTATGTGACA...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATGTCACATAAGTATCTaGGGCTCCCTTTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGCHISI*GSLFEI
Trigger: GATTTCAAAAAGGGAGCCTCAGATACTTATGTGACA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGCGGAAGAACAATTTCTaGTGTCATTGCCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGRKNNF*CHCHSY
Trigger: ATAACTGTGGCAATGACATCAGAAATTGTTCTTCCG...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACGGAAGAACAATTTCTaGTGTCATTGCCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGRKNNF*CHCHSY
Trigger: ATAACTGTGGCAATGACATCAGAAATTGTTCTTCCG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCACCAAAACACACTGATTaGGGAAAACATACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSPKHTD*GKHTGP
Trigger: AGGACCAGTATGTTTTCCTCAATCAGTGTGTTTTGG...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTATATCCAAAACACACTaGTTGAGGAAAACATACTGG +
Preference number: 4 (lower is better)
Translates to: AINGPNPPNQLATSLWPFISKTH*LRKTYW
Trigger: CCAGTATGTTTTCCTCAATCAGTGTGTTTTGGATAT...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAGATAAGATCTACTTTTaGGTCTTTCTGGGATCTGAC +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGDKIYF*VFLGSD
Trigger: GTCAGATCCCAGAAAGACTCAAAAGTAGATCTTATC...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCAAAGAGGCCTCCCCTaGTCAAATGAGAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPQRGLP*SNENRN
Trigger: ATTTCTGTTCTCATTTGATCAGGGGAGGCCTCTTTG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCAGATTGCCACGCTTCTaGACATACACACACACATAC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPRLPRF*TYTHTY
Trigger: GTATGTGTGTGTGTATGTTCAGAAGCGTGGCAATCT...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCACAAGTCCCTTCCTCTaGCTTCTCTGTGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVTSPFL*LLCGSD
Trigger: ATCACTGCCACAGAGAAGTCAGAGGAAGGGACTTGT...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGGGCTTCTCTCTGTATTaGTGGCATCCAAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQGFSLY*WHPSHL
Trigger: AAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCC...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACACGAGGGACTCATCATaGACAGGGGCGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNTRDSS*TGAVGL
Trigger: GAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGTTCTGTGCCATTCGCTaGTTGGGAATAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQFCAIR*LGINGG
Trigger: GCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAA...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTGGGAACAGTTCTATTaGAAACTGTCCGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTWEQFY*KLSEMP
Trigger: GGGCATCTCGGACAGTTTGCAATAGAACTGTTCCCA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAGTGTGGTTAGAGCCATaGTTGGACTCTATGACTAAA +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSVWLEP*LDSMTK
Trigger: TTTAGTCATAGAGTCCAAGCATGGCTCTAACCACAC...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGGTGTGGTTAGAGCCATaGTTGGACTCTATGACTAAA +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLVWLEP*LDSMTK
Trigger: TTTAGTCATAGAGTCCAAGCATGGCTCTAACCACAC...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGTATTTCAGGACATCTaGAGAAGGGTGACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTVFQDI*RRVTSF
Trigger: GAAGCTGGTCACCCTTCTGCAGATGTCCTGAAATAC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGCTCAGCCAGTTCTGCTaGATATTTAGGTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRLSQFC*IFRLTN
Trigger: ATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAG...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCGACATCGGGGCATGTaGCTTCGCTGTGGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNRHRGM*LRCGCD
Trigger: GTCGCACCCACAGCGAAGGCACATGCCCCGATGTCG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTGAAGTGTTCACAGATTaGCACGCTTCTGAACATACA +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTEVFTD*HASEHT
Trigger: TGTATGTTCAGAAGCGTGGCAATCTGTGAACACTTC...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACCTTTTCAAGCACTGTaGTATAAATACCCTTACCAC +
Preference number: 4 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVPFQAL*YKYPYH
Trigger: GTGGTAAGGGTATTTATAGCACAGTGCTTGAAAAGG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGTTGTATTGAACCCCTaGCTTCAGGCCCGAGATATT +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTVVLNP*LQARDI
Trigger: AATATCTCGGGCCTGAAGCCAGGGGTTCAATACAAC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCCTTGGGAATAAACGGTaGCATTGTATCGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVLGNKR*HCIGCQ
Trigger: CTGGCACCCGATACAATGCCACCGTTTATTCCCAAG...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCTTGGGAATAAACGGTaGCATTGTATCGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQLGNKR*HCIGCQ
Trigger: CTGGCACCCGATACAATGCCACCGTTTATTCCCAAG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCAATGATTCTGCATCATaGCTGCTCCATGCTAAGCCG +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTNDSAS*LLHAKP
Trigger: CGGCTTAGCATGGAGCAGCCATGATGCAGAATCATT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCCAATGATAATACTTTaGTTGGTGGTTATTTCTACC +
Preference number: 4 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPPMIIL*LVVIST
Trigger: GGTAGAAATAACCACCAACCAAAGTATTATCATTGG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCATTTCAAAGCAATACTTaGTTCCAGGGAACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSFQSNT*FQGTSH
Trigger: GTGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAA...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTGTCAAACACTGCACTaGGAACAGTTCTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRCQTLH*EQFYCK
Trigger: TTTGCAATAGAACTGTTCCCAGTGCAGTGTTTGACA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTCATACGTGCTTGTGTaGTTAGAGCCATGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTSYVLV*LEPCLD
Trigger: GTCCAAGCATGGCTCTAACCACACAAGCACGTATGA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTACTTACATCAATGTTaGACACATTGCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPYLHQC*THCWAV
Trigger: CACGGCCCAGCAATGTGTCCAACATTGATGTAAGTA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATGTAATAACCAAGTGTaGTTGACTCATTCCCAACGT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGCNNQV*LTHSQR
Trigger: ACGTTGGGAATGAGTCAACCACACTTGGTTATTACA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTGTAATAACCAAGTGTaGTTGACTCATTCCCAACGT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRCNNQV*LTHSQR
Trigger: ACGTTGGGAATGAGTCAACCACACTTGGTTATTACA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCAGAGCACAAATCCAGTaGAGTCAATTAGGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPRAQIQ*SQLGGS
Trigger: ACTTCCGCCTAATTGACTCCACTGGATTTGTGCTCT...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGGTGTTTGTTTCCACCTaGGGTGTTCCAGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQVFVST*GVPVPF
Trigger: GAATGGAACTGGAACACCTCAGGTGGAAACAAACAC...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAGGGTTGATGTTGTATTaGACCCCTGGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPGLMLY*TPGFRP
Trigger: GGGCCTGAAGCCAGGGGTTCAATACAACATCAACCC...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCCGGCCAGGTTCCAGTaGCTTGATCCCATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNPARFQ*LDPIPY
Trigger: GTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAATCCAGGCTCCACTGCTaGCCTCCAGCTCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKSRLHC*PPAQSL
Trigger: CAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGA...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCTGAGGCTCCCTTTTTaGAATCCTCATACGTGTATT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPLRLPF*NPHTCI
Trigger: AATACACGTATGAGGATTTCAAAAAGGGAGCCTCAG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCAGCTTGCTGCTTCTTaGAGTAGGCCTCAAAATTCT +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTQLAAS*SRPQNS
Trigger: AGAATTTTGAGGCCTACTTCAAGAAGCAGCAAGCTG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCCAAAACACACTGATTaGGGAAAACATACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPPKHTD*GKHTGP
Trigger: AGGACCAGTATGTTTTCCTCAATCAGTGTGTTTTGG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCAGAAATTCTCAAGGTaGTATTTGAGTCGCCATTCT +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLQKFSR*YLSRHS
Trigger: AGAATGGCGACTCAAATATCACCTTGAGAATTTCTG...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCTGGACTCTTCCAATTTaGGCTCATTGTTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVWTLPI*AHCSWE
Trigger: CTCCCAGGAACAATGAGCTCAAATTGGAAGAGTCCA...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTTTTTCATCCCAGATaGAAAACACACGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTLFHPR*KTHVMG
Trigger: GCCCATCACGTGTGTTTTTCATCTGGGATGAAAAAG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCAACTCTGTTTCAGATaGTGGAATTCCAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQQLCFR*WNSRQV
Trigger: CACCTGCCTGGAATTCCATCATCTGAAACAGAGTTG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATACAGTGCCATTGCCATTaGTCCAGGAGAGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIQCHCH*SRREQP
Trigger: AGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTG...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAAGGAGGCAGTGCCATTaGCATTGCTCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPRRQCH*HCSRRE
Trigger: CTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCT...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCCCTCATGGCTTCCAATaGTTTCAAGAAGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFPHGFQ*FQEEPG
Trigger: GCCGGGTTCTTCTTGAAAGCATTGGAAGCCATGAGG...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAGGGGCTGTCCTTCTGTaGCATTCGCTGCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPGAVLL*HSLLGN
Trigger: ATTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCC...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGGGGCTGTCCTTCTGTaGCATTCGCTGCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGGAVLL*HSLLGN
Trigger: ATTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACTCCAGCTCAAAGCCTaGATTGGCGCCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKLQLKA*IGARRA
Trigger: TGCCCTCCTGGCGCCAATGCAGGCTTTGAGCTGGAG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCTCCAGCTCAAAGCCTaGATTGGCGCCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNLQLKA*IGARRA
Trigger: TGCCCTCCTGGCGCCAATGCAGGCTTTGAGCTGGAG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGTTCCGGGTGGGGGCTaGCATCTTTCCACAGGACAC +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKVPGGG*HLSTGH
Trigger: GTGTCCTGTGGAAAGATGGCAGCCCCCACCCGGAAC...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACGTTCCGGGTGGGGGCTaGCATCTTTCCACAGGACAC +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNVPGGG*HLSTGH
Trigger: GTGTCCTGTGGAAAGATGGCAGCCCCCACCCGGAAC...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTTGTCATCTATCATATaGAGCTTCATGCCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRLSSII*SFMPSK
Trigger: TTTTGAGGGCATGAAGCTGCATATGATAGATGACAA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGATCTCTACTGAGTTTTaGCTGTGGAAGCATAATTCA +
Preference number: 4 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGISTEF*LWKHNS
Trigger: TGAATTATGCTTCCACAGGCAAAACTCAGTAGAGAT...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCCACACGTTCTCTGCTaGCACTACTCAATTCTAGCA +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQPHVLC*HYSILA
Trigger: TGCTAGAATTGAGTAGTGGCAGCAGAGAACGTGTGG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTTTCACCATCCTCACTaGTGTTTGTTTCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTFHHPH*CLFPPE
Trigger: CTCAGGTGGAAACAAACACCAGTGAGGATGGTGAAA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGTTCTTAAACTATCGTTaGCTCCAGAGCTTTCACCAT +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLFLNYR*LQSFHH
Trigger: ATGGTGAAAGCTCTGGAGCCAACGATAGTTTAAGAA...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATATGTCAAACACAGGACTaGGCCCAGTGCTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGICQTQD*AQCYWE
Trigger: CTCCCAGTAGCACTGGGCCCAGTCCTGTGTTTGACA...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATGTGATGTTACACCATaGTTGATGCACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGCDVTP*LMHNSN
Trigger: ATTACTGTTGTGCATCAACCATGGTGTAACATCACA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGACGTGGTCCACTTCTaGAGAGATGGTGATGTTATA +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTDVVHF*RDGDVI
Trigger: TATAACATCACCATCTCTCCAGAAGTGGACCACGTC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTTGTTGGACACATTGCTaGGCCGTGTGTACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFCWTHC*AVCTVQ
Trigger: CTGCACAGTACACACGGCCCAGCAATGTGTCCAACA...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAGCTCAAAGCCTGCATTaGCGCCAGGAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTAQSLH*RQEGRS
Trigger: GGACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGC...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAATGCAGGTGTTCCGGGTaGGGGCTGCCATCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKCRCSG*GLPSFH
Trigger: GTGGAAAGATGGCAGCCCCCACCCGGAACACCTGCA...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTAATACTCCTCACATTTaGTTCTTCCCTGTTCAACAC +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTNTPHI*FFPVQH
Trigger: GTGTTGAACAGGGAAGAACCAAATGTGAGGAGTATT...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGGGAACACCGTGGTCTaGCCAGGAGGTGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGGNTVV*PGGEME
Trigger: TTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGGTGTCGGGAACACCGTaGTCTGGCCAGGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKVSGTP*SGQEVK
Trigger: TTTCACCTCCTGGCCAGACCACGGTGTTCCCGACAC...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCAAAAGTCGTTGTTCCTaGGAGATGCTATCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTKSRCS*EMLSMA
Trigger: GGCCATTGATAGCATCTCCCAGGAACAACGACTTTT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGTTCCATTCTGTTTATaGAAGGATTCTGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPVPFCL*KDSAVL
Trigger: CAGTACAGCAGAATCCTTTCATAAACAGAATGGAAC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTACGACTCGTTATCGCTaGCTTTCCAGATCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFTTRYR*LSRSGS
Trigger: TGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGGACAGGACACACTGTaGTGTTGTAGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGGQDTL*CCRRCW
Trigger: CCAGCACCTTCTACAACATCACAGTGTGTCCTGTCC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCAGCTCCCTCCTGTGTaGTATGCATCTGAAATGATT +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQQLPPV*YASEMI
Trigger: AATCATTTCAGATGCATATCACACAGGAGGGAGCTG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCATAACCAAGTGTGGTTaGCTCATTCCCAACGTCAAT +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTITKCG*LIPNVN
Trigger: ATTGACGTTGGGAATGAGTCAACCACACTTGGTTAT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCCAGCTTGCTGCTTCTTaGAGTAGGCCTCAAAATTCT +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVQLAAS*SRPQNS
Trigger: AGAATTTTGAGGCCTACTTCAAGAAGCAGCAAGCTG...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGCTGCATATTTAGGTTaGCTAATTCCAACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPAAYLG*LIPTSF
Trigger: GAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTATATCCAAAACACACTaGTTGAGGAAAACATACTGG +
Preference number: 4 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTISKTH*LRKTYW
Trigger: CCAGTATGTTTTCCTCAATCAGTGTGTTTTGGATAT...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCAATATAGATCTCTACTaGGTTTTGCCTGTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPNIDLY*VLPVEA
Trigger: TGCTTCCACAGGCAAAACTCAGTAGAGATCTATATT...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGACTGAACAGGGACCTATaGATGAAGTACCGACCGCTC +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGLNRDL*MKYRPL
Trigger: GAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAG...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTACAAGTCCCTTCCTCTaGCTTCTCTGTGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFTSPFL*LLCGSD
Trigger: ATCACTGCCACAGAGAAGTCAGAGGAAGGGACTTGT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAATTTATGAAAGGATTCTaGTGTACTGCTGATCTGCGT +
Preference number: 4 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQFMKGF*CTADLR
Trigger: ACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAA...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTTTATGAAAGGATTCTaGTGTACTGCTGATCTGCGT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPFMKGF*CTADLR
Trigger: ACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAGCAAACTGTCCGAGATaGCCCTTCAGTCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPANCPR*PFSPIW
Trigger: CCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGC...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGTGTGGTTAGAGCCATaGTTGGACTCTATGACTAAA +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTVWLEP*LDSMTK
Trigger: TTTAGTCATAGAGTCCAAGCATGGCTCTAACCACAC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAAATTCTCAGCCAGTTCTaGTGCATATTTAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQILSQF*CIFRLT
Trigger: AGTCAACCTAAATATGCAGCAGAACTGGCTGAGAAT...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTTCATAGATTGTCATTaGAGTTGTGTTCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRFIDCH*SCVLVD
Trigger: ATCTACCAGAACACAACTGCAATGACAATCTATGAA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACATGCCTTCGCTGTGGGTaGGACGGTCTGGTTCACTCC +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTCLRCG*DGLVHS
Trigger: GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCA...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTAGGTCACAGTATGGCTaGAGTGGGCAGACACCAAAT +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFRSQYG*SGQTPN
Trigger: ATTTGGTGTCTGCCCACTGCAGCCATACTGTGACCT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGATCATCCAGTTCTATTaGAAACTGTCCGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQIIQFY*KLSEMP
Trigger: GGGCATCTCGGACAGTTTGCAATAGAACTGGATGAT...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGTTTCACCATCCTCACTaGTGTTTGTTTCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQFHHPH*CLFPPE
Trigger: CTCAGGTGGAAACAAACACCAGTGAGGATGGTGAAA...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCCTTCAGTCCCATTTaGTCCTTTTGGAACTATTTC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTPFSPI*SFWNYF
Trigger: GAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTGTCAAACACTGCACTaGGAACAGTTCTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPCQTLH*EQFYCK
Trigger: TTTGCAATAGAACTGTTCCCAGTGCAGTGTTTGACA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTGTAATAACCAAGTGTaGTTGACTCATTCCCAACGT +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPCNNQV*LTHSQR
Trigger: ACGTTGGGAATGAGTCAACCACACTTGGTTATTACA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCAGAGCACAAATCCAGTaGAGTCAATTAGGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVRAQIQ*SQLGGS
Trigger: ACTTCCGCCTAATTGACTCCACTGGATTTGTGCTCT...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CAA 72 bp ATCATCACTAGATCCAACTTTGGAGGCAAAAAGTCGTaGTTCCTGGGAGATGCTATCAATGGCCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: IITRSNFGGKKS*FLGDAINGPNP
Trigger: GGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTCCAAAGTTGGATCTAGTGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGGCAACAGTTGCTACTaGAGGGTCAGGAATTGGACT +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIGNSCY*RVRNWT
Trigger: AGTCCAATTCCTGACCCTTCAGTAGCAACTGTTGCC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCATGTTACACCATGGTTaGTGCACAACAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTMLHHG*CTTVIV
Trigger: GACAATTACTGTTGTGCATCAACCATGGTGTAACAT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCATTGACCTGAAGTCTTaGGTCTTGAGTCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFIDLKS*VLSQLL
Trigger: GAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAAT...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGGTGACGTCAAAAACCTaGATAGCATTTGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQVTSKT*IAFVLN
Trigger: GTTCAGGACAAATGCTATTCAGGTTTTTGACGTCAC...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAACGACTCGTTATCGCTaGCTTTCCAGATCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGITTRYR*LSRSGS
Trigger: TGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGT...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGGATATGCATCTGAAATaGTTCTGCATCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQDMHLK*FCIMAA
Trigger: AGCAGCCATGATGCAGAATCATTTCAGATGCATATC...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGACATCTGAGTAGCGACTaGAGGACACATAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGHLSSD*RTHSSQ
Trigger: CTGAGAGCTATGTGTCCTTCAGTCGCTACTCAGATG...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGGAAGAACAATTTCTaGTGTCATTGCCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTRKNNF*CHCHSY
Trigger: ATAACTGTGGCAATGACATCAGAAATTGTTCTTCCG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCAATATAGATCTCTACTaGGTTTTGCCTGTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTNIDLY*VLPVEA
Trigger: TGCTTCCACAGGCAAAACTCAGTAGAGATCTATATT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCAGAAATTCTCAAGGTaGTATTTGAGTCGCCATTCT +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTQKFSR*YLSRHS
Trigger: AGAATGGCGACTCAAATATCACCTTGAGAATTTCTG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGGACCTGATACTCAATaGACTGCTTACTACCAAAAA +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTGPDTQ*TAYYQK
Trigger: TTTTTGGTAGTAAGCAGTTCATTGAGTATCAGGTCC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAACCCCAGCACTGCAATaGACCAGAATCGGCGATTCG +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKTPALQ*TRIGDS
Trigger: CGAATCGCCGATTCTGGTGCATTGCAGTGCTGGGGT...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGTTCATAGATTGTCATTaGAGTTGTGTTCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: AHVQIENPFGRGATYPSLFIDCH*SCVLVD
Trigger: ATCTACCAGAACACAACTGCAATGACAATCTATGAA...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAACTGTAGGATTCCTCTaGTTCTCCCATTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGTVGFL*FSHSHP
Trigger: TGGGTGGGAATGGGAGAAGCAGAGGAATCCTACAGT...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACAGTTCCTCCCATGATTaGTGGGGCCGCTTGCCCATT +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNSSSHD*WGRLPI
Trigger: AATGGGCAAGCGGCCCCAGCAATCATGGGAGGAACT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCATGTGAACAGTCCACCTaGCCAACACAGCACAGTAGT +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPCEQST*PTQHSS
Trigger: ACTACTGTGCTGTGTTGGGCAGGTGGACTGTTCACA...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACTGTCAAACACAGGACTaGGCCCAGTGCTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNCQTQD*AQCYWE
Trigger: CTCCCAGTAGCACTGGGCCCAGTCCTGTGTTTGACA...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAATGTGATGTTACACCATaGTTGATGCACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQCDVTP*LMHNSN
Trigger: ATTACTGTTGTGCATCAACCATGGTGTAACATCACA...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAACGGAGATCAGAAACTaGGATCGGCTCTGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPTEIRN*DRLCDD
Trigger: GTCATCACAGAGCCGATCCCAGTTTCTGATCTCCGT...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTTAAAGTTGCTGCTGTaGTGTTGGTACTTACATCAA +
Preference number: 4 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPLKLLL*CWYLHQ
Trigger: TTGATGTAAGTACCAACACCACAGCAGCAACTTTAA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGTCCACAGATGACACCTaGATCCTGGGGCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKSTDDT*ILGQGN
Trigger: GTTTCCTTGCCCCAGGATCCAGGTGTCATCTGTGGA...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCAATACTCCTCACATTTaGTTCTTCCCTGTTCAACAC +
Preference number: 4 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTNTPHI*FFPVQH
Trigger: GTGTTGAACAGGGAAGAACCAAATGTGAGGAGTATT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAGTGTCGGGAACACCGTaGTCTGGCCAGGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTVSGTP*SGQEVK
Trigger: TTTCACCTCCTGGCCAGACCACGGTGTTCCCGACAC...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACACATGTGCCTTCGCTGTaGGTGCGACGGTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTHVPSL*VRRSGS
Trigger: TGAACCAGACCGTCGCACCCACAGCGAAGGCACATG...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCAGGACTCCAGGGACTTaGTTATTCCTTCATAAAACC +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVRTPGT*LFLHKT
Trigger: GGTTTTATGAAGGAATAACCAAGTCCCTGGAGTCCT...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACACTGGAGGTCACAGTATaGCTGCAGTGGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTLEVTV*LQWADT
Trigger: GGTGTCTGCCCACTGCAGCCATACTGTGACCTCCAG...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATACTGGACGTAAGCCTGTaGTGTTACACCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGILDVSL*CYTMVD
Trigger: ATCAACCATGGTGTAACATCACAGGCTTACGTCCAG...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCTGCCTATTCCTGGAGTaGTGGAGAATACATATGAAG +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFCLFLE*WRIHMK
Trigger: CTTCATATGTATTCTCCATCACTCCAGGAATAGGCA...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCATCAGGCCCGAGATATTaGCCTGAAGTCTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPSGPRY*PEVLSL
Trigger: AAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGA...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGTGTGTGATATGCATCTaGAATGATTCTGCATCATGG +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQCVICI*NDSASW
Trigger: CCATGATGCAGAATCATTTCAGATGCATATCACACA...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCAGGTTCCAGTGACTTaGTCCCATCCCCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNQVPVT*SHPLLV
Trigger: CACAAGTAGGGGATGGGATCAAGTCACTGGAACCTG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACAGGATCTGTACAGAATaGCTTCCGGCCAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNRICTE*LPARFQ
Trigger: CTGGAACCTGGCCGGAAGTCATTCTGTACAGATCCT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCGAACTTGACCTTTACTaGATTGTGACTGACAGATGT +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVELDLY*IVTDRC
Trigger: ACATCTGTCAGTCACAATTCAGTAAAGGTCAAGTTC...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTACCCAACCAATGGGTTaGAAATGTTGCCAACAGAAG +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFTQPMG*KCCQQK
Trigger: CTTCTGTTGGCAACATTTTCAACCCATTGGTTGGGT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCTTCATACAGCACCCTaGGGACAATGTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNLHTAP*GQCGFP
Trigger: AGGGAAGCCACATTGTCCTCAGGGTGCTGTATGAAG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTCTTTTTCATCCCAGATaGAAAACACACGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFLFHPR*KTHVMG
Trigger: GCCCATCACGTGTGTTTTTCATCTGGGATGAAAAAG...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCACAATTTGAAAACCACTaGTCTAGCCCAGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPQFENH*SSPEVS
Trigger: GCTGACCTCTGGGCTAGATCAGTGGTTTTCAAATTG...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGTTTATGAAAGGATTCTaGTGTACTGCTGATCTGCGT +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQFMKGF*CTADLR
Trigger: ACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAA...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGGGCTTCTCTCTGTATTaGTGGCATCCAAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKGFSLY*WHPSHL
Trigger: AAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCC...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACTGGCATTGTATCGGGTaGCAGGCTCTAACCCGACAA +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNWHCIG*QALTRQ
Trigger: TTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCA...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAATTCTGCATCATGGCTaGTCCATGCTAAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIILHHG*SMLSRS
Trigger: AGATCGGCTTAGCATGGAGCAGCCATGATGCAGAAT...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR GCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCCTCAGCCAGTTCTGCTaGATATTTAGGTTGACTAAT +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVLSQFC*IFRLTN
Trigger: ATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAG...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGACCTTCGTGTGACCTaGCCATTTGGAATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKDLRVT*PFGIPD
Trigger: GTCTGGGATTCCAAATGGGCAGGTCACACGAAGGTC...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGAGGTCACAGTATGGCTaGAGTGGGCAGACACCAAAT +
Preference number: 4 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKRSQYG*SGQTPN
Trigger: ATTTGGTGTCTGCCCACTGCAGCCATACTGTGACCT...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGTTGTATTGAACCCCTaGCTTCAGGCCCGAGATATT +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIVVLNP*LQARDI
Trigger: AATATCTCGGGCCTGAAGCCAGGGGTTCAATACAAC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCATTCTCTCTGTATTGCTaGCATCCAAGCCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPFSLYC*HPSHLL
Trigger: CAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAA...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAAATGATTCTGCATCATaGCTGCTCCATGCTAAGCCG +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPNDSAS*LLHAKP
Trigger: CGGCTTAGCATGGAGCAGCCATGATGCAGAATCATT...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACTGTTGGACACATTGCTaGGCCGTGTGTACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNCWTHC*AVCTVQ
Trigger: CTGCACAGTACACACGGCCCAGCAATGTGTCCAACA...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAAGTCCTGAGCCTGCTTaGAGGGCCAATACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTSPEPA*RANTPH
Trigger: GTGAGGAGTATTGGCCCTCCAAGCAGGCTCAGGACT...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGACAATGAGCCAAATTTaGCATAGGGGCCATTCTTAT +
Preference number: 4 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQTMSQI*HRGHSY
Trigger: ATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGT...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCATGTTACACCATGGTTaGTGCACAACAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFMLHHG*CTTVIV
Trigger: GACAATTACTGTTGTGCATCAACCATGGTGTAACAT...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGTAGAAGATACGGGTTaGTGTTGTATTGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIVEDTG*CCIEPL
Trigger: CAGGGGTTCAATACAACATCAACCCGTATCTTCTAC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGTAGGTATAGTTAGATaGCGACTCGTTATCGCTGAC +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIVGIVR*RLVIAD
Trigger: GTCAGCGATAACGAGTCGTCATCTAACTATACCTAC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAGGACAGGACACACTGTaGTGTTGTAGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTGQDTL*CCRRCW
Trigger: CCAGCACCTTCTACAACATCACAGTGTGTCCTGTCC...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTGATATGCATCTGAAATaGTTCTGCATCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFDMHLK*FCIMAA
Trigger: AGCAGCCATGATGCAGAATCATTTCAGATGCATATC...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACATCTGAGTAGCGACTaGAGGACACATAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKHLSSD*RTHSSQ
Trigger: CTGAGAGCTATGTGTCCTTCAGTCGCTACTCAGATG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACATGGCATTGTATCGGGTaGCAGGCTCTAACCCGACAA +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTWHCIG*QALTRQ
Trigger: TTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCA...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCAATGTTGGACACATTaGTGGGCCGTGTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNQCWTH*WAVCTV
Trigger: CACAGTACACACGGCCCAGCAATGTGTCCAACATTG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACAATGTTGGACACATTaGTGGGCCGTGTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKQCWTH*WAVCTV
Trigger: CACAGTACACACGGCCCAGCAATGTGTCCAACATTG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGCCCATCCCCTACTTGTaGAAAGATCTCCACTGTGTA +
Preference number: 4 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKPIPYL*KDLHCV
Trigger: TACACAGTGGAGATCTTTGCACAAGTAGGGGATGGG...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCTTGTCATCTATCATATaGAGCTTCATGCCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVLSSII*SFMPSK
Trigger: TTTTGAGGGCATGAAGCTGCATATGATAGATGACAA...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGAGCTCCCTGGGATTTaGCACCCATCACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKELPGI*HPSQWF
Trigger: AAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTC...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTTTTCAAAGCAATACTTaGTTCCAGGGAACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFFQSNT*FQGTSH
Trigger: GTGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAA...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATACTTACATCAATGTTaGACACATTGCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGYLHQC*THCWAV
Trigger: CACGGCCCAGCAATGTGTCCAACATTGATGTAAGTA...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAATTAGGGGATCCATCTaGAGGAGGGGGATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKIRGSI*RRGICD
Trigger: ATCACAGATCCCCCTCCTCCAGATGGATCCCCTAAT...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAATCCGTTGAATGGGTCTaGACCGAAAGTTTGACACGG +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKSVEWV*TESLTR
Trigger: CCGTGTCAAACTTTCGGTCCAGACCCATTCAACGGA...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGGGAGATGCTATCAATaGCCCAAATCCCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKGRCYQ*PKSPKP
Trigger: TGGTTTGGGGGATTTGGGCCATTGATAGCATCTCCC...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTATGTTACACCATGGTTaGTGCACAACAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFMLHHG*CTTVIV
Trigger: GACAATTACTGTTGTGCATCAACCATGGTGTAACAT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACTGGACGTAAGCCTGTaGTGTTACACCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKLDVSL*CYTMVD
Trigger: ATCAACCATGGTGTAACATCACAGGCTTACGTCCAG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGTGACGTCAAAAACCTaGATAGCATTTGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGVTSKT*IAFVLN
Trigger: GTTCAGGACAAATGCTATTCAGGTTTTTGACGTCAC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGGTAGGTATAGTTAGATaGCGACTCGTTATCGCTGAC +
Preference number: 4 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKVGIVR*RLVIAD
Trigger: GTCAGCGATAACGAGTCGTCATCTAACTATACCTAC...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGATATGCATCTGAAATaGTTCTGCATCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGDMHLK*FCIMAA
Trigger: AGCAGCCATGATGCAGAATCATTTCAGATGCATATC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTCATGCTTGGACTCTATaGCTAAATGGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFHAWTL*LNGRHT
Trigger: AGTATGTCTACCATTTAGTCATAGAGTCCAAGCATG...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAAACTGTCTCAGAGGGTaGCTCTCACTTGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKNCLRG*LSLVWI
Trigger: TATCCAGACAAGTGAGAGTCACCCTCTGAGACAGTT...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTGATAAGATCTACTTTTaGGTCTTTCTGGGATCTGAC +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFDKIYF*VFLGSD
Trigger: GTCAGATCCCAGAAAGACTCAAAAGTAGATCTTATC...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTGGACCTGATACTCAATaGACTGCTTACTACCAAAAA +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFGPDTQ*TAYYQK
Trigger: TTTTTGGTAGTAAGCAGTTCATTGAGTATCAGGTCC...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACATTCTGTGCCATTCGCTaGTTGGGAATAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTFCAIR*LGINGG
Trigger: GCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAA...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGTGGATGTCAAACACTaGACTGGGAACAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGVDVKH*TGNSSI
Trigger: AATAGAACTGTTCCCAGTGCAGTGTTTGACATCCAC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACGTGACTACTTGTGTTaGGTTGCTGGAATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKRDYLC*VAGISS
Trigger: GCTGGAAATTCCAGCAACGCAACACAAGTAGTCACG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACACCGTTCTATACTCAGTaGCATTCTCAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTPFYTQ*HSQRSS
Trigger: GCTGCTCCTCTGAGAATGGCACTGAGTATAGAACGG...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTATTCTCAGCCAGTTCTaGTGCATATTTAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFILSQF*CIFRLT
Trigger: AGTCAACCTAAATATGCAGCAGAACTGGCTGAGAAT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAATACTGGTCCTCTGTCTaGACCATTAAAGGCCTATGC +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKYWSSV*TIKGLC
Trigger: GCATAGGCCTTTAATGGTGCAGACAGAGGACCAGTA...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTCCTTTTCAAGCACTGTaGTATAAATACCCTTACCAC +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFPFQAL*YKYPYH
Trigger: GTGGTAAGGGTATTTATAGCACAGTGCTTGAAAAGG...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGTTTCACCATCCTCACTaGTGTTTGTTTCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKFHHPH*CLFPPE
Trigger: CTCAGGTGGAAACAAACACCAGTGAGGATGGTGAAA...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTCTCATTGCCTATTCCTaGAGTGATGGAGAATACATA +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFLIAYS*SDGEYI
Trigger: TATGTATTCTCCATCACTCCAGGAATAGGCAATGAG...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGTTGTATTGAACCCCTaGCTTCAGGCCCGAGATATT +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKVVLNP*LQARDI
Trigger: AATATCTCGGGCCTGAAGCCAGGGGTTCAATACAAC...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCATTTCAAAGCAATACTTaGTTCCAGGGAACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPFQSNT*FQGTSH
Trigger: GTGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAA...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGACCCTTCAGTCCCATTTaGTCCTTTTGGAACTATTTC +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGPFSPI*SFWNYF
Trigger: GAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGG...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCACCCTTCAGTCCCATTTaGTCCTTTTGGAACTATTTC +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPPFSPI*SFWNYF
Trigger: GAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGG...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTTGTCAAACACTGCACTaGGAACAGTTCTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFCQTLH*EQFYCK
Trigger: TTTGCAATAGAACTGTTCCCAGTGCAGTGTTTGACA...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACTGCCACCCATCACAATaGTTTCGGACATATTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNCHPSQ*FRTYWR
Trigger: CCTCCAATATGTCCGAAACCATTGTGATGGGTGGCA...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGTTCCATTCTGTTTATaGAAGGATTCTGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIVPFCL*KDSAVL
Trigger: CAGTACAGCAGAATCCTTTCATAAACAGAATGGAAC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR TCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACTCTGGACCGAAAGTTTaGCACGGGAAATATCATAGG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNSGPKV*HGKYHR
Trigger: CCTATGATATTTCCCGTGTCAAACTTTCGGTCCAGA...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACAAAGAGGCCTCCCCTaGTCAAATGAGAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKQRGLP*SNENRN
Trigger: ATTTCTGTTCTCATTTGATCAGGGGAGGCCTCTTTG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAATCTCAAGGTGATATTTaGGTCGCCATTCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKSQGDI*VAILTQ
Trigger: TTGGGTGAGAATGGCGACTCAAATATCACCTTGAGA...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGACCTTGTCAACTTCATTaGCTATTGGAGGATAAACTC +
Preference number: 4 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGPCQLH*LLEDKL
Trigger: GAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGG...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCACTCATTGCCTATTCCTaGAGTGATGGAGAATACATA +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPLIAYS*SDGEYI
Trigger: TATGTATTCTCCATCACTCCAGGAATAGGCAATGAG...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAGTTGTATTGAACCCCTaGCTTCAGGCCCGAGATATT +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTVVLNP*LQARDI
Trigger: AATATCTCGGGCCTGAAGCCAGGGGTTCAATACAAC...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCCCAATGATAATACTTTaGTTGGTGGTTATTTCTACC +
Preference number: 4 (lower is better)
Translates to: INISGFTSHTFSAATTQFPMIIL*LVVIST
Trigger: GGTAGAAATAACCACCAACCAAAGTATTATCATTGG...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CCA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTTTAAAGTTGCTGCTGTaGTGTTGGTACTTACATCAA +
Preference number: 4 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFLKLLL*CWYLHQ
Trigger: TTGATGTAAGTACCAACACCACAGCAGCAACTTTAA...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR TCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACATTCTGCTGTACTGCTaGTCTGCGTTATGCCATTTT +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNILLYC*SALCHF
Trigger: AAAATGGCATAACGCAGATCAGCAGTACAGCAGAAT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACTGCCTATTCCTGGAGTaGTGGAGAATACATATGAAG +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNCLFLE*WRIHMK
Trigger: CTTCATATGTATTCTCCATCACTCCAGGAATAGGCA...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACGCATGTAGTTGGCATTaGTGTAGTCATCCGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNACSWH*CSHPLN
Trigger: ATTCAACGGATGACTACATCAATGCCAACTACATGC...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR GCA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACAAGAAAAGGATTTCTaGCACTGTAGGATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKQEKDF*HCRIPL
Trigger: CAGAGGAATCCTACAGTGGCAGAAATCCTTTTCTTG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACATTTCACCATCCTCACTaGTGTTTGTTTCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTFHHPH*CLFPPE
Trigger: CTCAGGTGGAAACAAACACCAGTGAGGATGGTGAAA...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCATGTGATGTTACACCATaGTTGATGCACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPCDVTP*LMHNSN
Trigger: ATTACTGTTGTGCATCAACCATGGTGTAACATCACA...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
3UTR CAA 72 bp CTACACAGTAGTCTGAAAACCCAGGACTTAAAACTTTaGAGGCAAATCAACAACAGTCACCAAGACTTGTTT +
Preference number: 4 (lower is better)
Translates to: LHSSLKTQDLKL*RQINNSHQDLF
Trigger: AAACAAGTCTTGGTGACTGTTGTTGATTTGCCTCAAAAGTTTTAAGTCCTGGGTTTTCAGACTACTGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
3UTR CAA 72 bp AAATTACAGTTTAGAGTCCACATCAACACATCCTATTaGTATGTGCCCCCAAGGGAGAAAAAGCTACAGTAT +
Preference number: 4 (lower is better)
Translates to: KLQFRVHINTSY*YVPPREKKLQY
Trigger: ATACTGTAGCTTTTTCTCCCTTGGGGGCACATACAAATAGGATGTGTTGATGTGGACTCTAAACTGTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCCTTGTCAACTTCATTaGCTATTGGAGGATAAACTC +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNPCQLH*LLEDKL
Trigger: GAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR GCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCAAACCCATACCAGCTaGTTTTCTGTATGCAATTGT +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNQTHTS*FSVCNC
Trigger: ACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCTCATTGCCTATTCCTaGAGTGATGGAGAATACATA +
Preference number: 4 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNLIAYS*SDGEYI
Trigger: TATGTATTCTCCATCACTCCAGGAATAGGCAATGAG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR TCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAGCTGCATATTTAGGTTaGCTAATTCCAACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTAAYLG*LIPTSF
Trigger: GAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGC...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CCA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACACCAATGATAATACTTTaGTTGGTGGTTATTTCTACC +
Preference number: 4 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTPMIIL*LVVIST
Trigger: GGTAGAAATAACCACCAACCAAAGTATTATCATTGG...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS CCA 90 bp GAAGGGTCAGGAATTGGACTAGGGGTGCCACCTGCGCACAGGATCTaGCCCAGGCGCAGCAGCAGCAGCAGCAGCGGCAGCGCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: EGSGIGLGVPPAHRI*PRRSSSSSSGSAQR
Trigger: GCGCTGGGCGCTGCCGCTGCTGCTGCTGCTGCTGCGCCTGGGCCAGATCCTGTGCGCAGGTGGCACCCCTAGTCCAATTCCTGACCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000527952.1
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp TTAATGTCAAACACAGGACTGGGCCTGCCACCTGCGCACAGGATCTaGCCCAGGCGCAGCAGCAGCAGCAGCAGCGGCAGCGCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: LMSNTGLGLPPAHRI*PRRSSSSSSGSAQR
Trigger: GCGCTGGGCGCTGCCGCTGCTGCTGCTGCTGCTGCGCCTGGGCCAGATCCTGTGCGCAGGTGGCAGGCCCAGTCCTGTGTTTGACATTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534219.5
CDS CCA 90 bp CCCGACAAGCAGGACTTCCGTGTCTCGGGACTGCTGGCCGGAGGATaGGTCCACAGGTCCCACGAGGGACTCATCATGCACAGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: PDKQDFRVSGLLAGG*VHRSHEGLIMHRGG
Trigger: ACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 90 bp AGGAGCAGCTCTCCAGGTGGGTCGCATTGTTCCAGGCTCCACTGCTaGCCTCCAGCTCAAAGCCTGCATTGGCGCCAGGAGGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RSSSPGGSHCSRLHC*PPAQSLHWRQEGRS
Trigger: GGACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGAGAGCTGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS GCA 90 bp GTGCCAGGCTCTAACCCGACAAGCAGGACTTCCGTGTCTCGGGACTaGTGGCCGGAGGATGGGTCCACAGGTCCCACGAGGGACTCATCA +
Preference number: 5 (lower is better)
Translates to: VPGSNPTSRTSVSRD*WPEDGSTGPTRDSS
Trigger: TGATGAGTCCCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp ATGGGTCCACAGGTCCCACGAGGGACTCATCATGCACAGGGGCGGTaGGGCTCCCTGCCCGGCTTCTCTCTGTATTGCTGGCATCCAAGC +
Preference number: 5 (lower is better)
Translates to: MGPQVPRGTHHAQGR*GSLPGFSLYCWHPS
Trigger: GCTTGGATGCCAGCAATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCTGTGGACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp CCAGGCTCTAACCCGACAAGCAGGACTTCCGTGTCTCGGGACTGCTaGCCGGAGGATGGGTCCACAGGTCCCACGAGGGACTCATCATGC +
Preference number: 5 (lower is better)
Translates to: PGSNPTSRTSVSRDC*PEDGSTGPTRDSSC
Trigger: GCATGATGAGTCCCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACCAGGGCTGGCTCTTaGGGGACCACTTCGCAGTCG +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSTRAGS*GTTSQS
Trigger: CGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCTGGT...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAAGCTCAAAGCCTGCATaGGCGCCAGGAGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: VDIGACAFAVGATVWFTPSSKPA*APGGQV
Trigger: GACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGCT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS GCA 90 bp AGGTCCCACGAGGGACTCATCATGCACAGGGGCGGTGGGGCTCCCTaGCCGGCTTCTCTCTGTATTGCTGGCATCCAAGCCACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: RSHEGLIMHRGGGAP*PASLCIAGIQATFC
Trigger: ACAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCACAGGAGGCAGTGCCATaGCCATTGCTCCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: VDIGACAFAVGATVWFTPQEAVP*PLLQER
Trigger: TCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTG...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTGTTCCTGGGAGGGGTaGAAGCTCAGAGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGCSWEG*KLRGTL
Trigger: GAGGGTGCCTCTGAGCTTCAACCCCTCCCAGGAACA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGATTGCTGGGGCCGCTaGCCCATTTCCCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPDCWGR*PISQAH
Trigger: GTGGGCTTGGGAAATGGGCAAGCGGCCCCAGCAATC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAATTTCTACCCGAGAATaGCCAGCTCCCTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VDIGACAFAVGATVWFTPISTRE*PAPSCV
Trigger: CACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAAT...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATGTGCCATTCGCTGCTaGGGAATAAACGGTGGCATT +
Preference number: 5 (lower is better)
Translates to: VDIGACAFAVGATVWFTPCAIRC*GINGGI
Trigger: AATGCCACCGTTTATTCCCAAGCAGCGAATGGCACA...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCGAGGCTCACTGACGTaGAGATTGGAAGAATCTGTC +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSRGSLT*RLEESV
Trigger: GACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTATTTCTACCCGAGAATaGCCAGCTCCCTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGISTRE*PAPSCV
Trigger: CACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAAT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCCAGGTTCCAGTGACTaGATCCCATCCCCTACTTGT +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGPGSSD*IPSPTC
Trigger: ACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCCCGACAGCCCCAATTaGTCATCTATCATATGCAGC +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSPDSPN*SSIICS
Trigger: GCTGCATATGATAGATGACAAATTGGGGCTGTCGGG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 90 bp AAGCACCGTCAGGGCTCTTCCAGTCCAGCCACATCTCCGTGGTGGTaGCGTAGACCACGTGGATGTCAAACACTGCACTGGGAACAGTTC +
Preference number: 5 (lower is better)
Translates to: KHRQGSSSPATSPWW*RRPRGCQTLHWEQF
Trigger: GAACTGTTCCCAGTGCAGTGTTTGACATCCACGTGGTCTACGTCACCACCACGGAGATGTGGCTGGACTGGAAGAGCCCTGACGGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS GCA 90 bp CTGTGCCATTCGCTGCTTGGGAATAAACGGTGGCATTGTATCGGGTaGCAGGCTCTAACCCGACAAGCAGGACTTCCGTGTCTCGGGACT +
Preference number: 5 (lower is better)
Translates to: LCHSLLGNKRWHCIG*QALTRQAGLPCLGT
Trigger: AGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS GCA 90 bp AGGGGGATCTGTGATGCCAGTAGTGCAGGTGTTCCGGGTGGGGGCTaGCATCTTTCCACAGGACACAGTGGTGATGCTGATGTTGTACGA +
Preference number: 5 (lower is better)
Translates to: RGICDASSAGVPGGG*HLSTGHSGDADVVR
Trigger: TCGTACAACATCAGCATCACCACTGTGTCCTGTGGAAAGATGGCAGCCCCCACCCGGAACACCTGCACTACTGGCATCACAGATCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp CCTGGGGCTGTCCTTCTGTGCCATTCGCTGCTTGGGAATAAACGGTaGCATTGTATCGGGTGCCAGGCTCTAACCCGACAAGCAGGACTT +
Preference number: 5 (lower is better)
Translates to: PGAVLLCHSLLGNKR*HCIGCQALTRQAGL
Trigger: AAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp CCGGAAGTTGATGAGCAGGTCAGTGGTGTCGGGAACACCGTGGTCTaGCCAGGAGGTGAAATGGAACTGTCTCAGAGGGTGACTCTCACT +
Preference number: 5 (lower is better)
Translates to: PEVDEQVSGVGNTVV*PGGEMELSQRVTLT
Trigger: AGTGAGAGTCACCCTCTGAGACAGTTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCCGACACCACTGACCTGCTCATCAACTTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCCCCTGTGGCAACAGTaGCTACTGAAGGGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPPLWQQ*LLKGQE
Trigger: TTCCTGACCCTTCAGTAGCAACTGTTGCCACAGGGG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCGGGTTGATGTTGTATaGAACCCCTGGCTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPRVDVV*NPWLQA
Trigger: GGCCTGAAGCCAGGGGTTCAATACAACATCAACCCG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGTACTTACATCAATGTaGGACACATTGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: VDIGACAFAVGATVWFTPVLTSM*DTLLGR
Trigger: ACGGCCCAGCAATGTGTCCAACATTGATGTAAGTAC...TGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGACCAGGGCTGGCTCTTaGGGGACCACTTCGCAGTCG +
Preference number: 5 (lower is better)
Translates to: AHVQIENPFGRGATYPSLTRAGS*GTTSQS
Trigger: CGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCTGGT...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGTCCAGGTGGGTCGCATaGTTCCAGGCTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGSRWVA*FQAPLL
Trigger: CAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGA...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATCCAGGTGGGTCGCATaGTTCCAGGCTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGSRWVA*FQAPLL
Trigger: CAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGACGAGGTACCGGAAGTaGATGAGCAGGTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPTRYRK*MSRSVV
Trigger: CACCACTGACCTGCTCATCAACTTCCGGTACCTCGT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCCCGACAGCCCCAATTaGTCATCTATCATATGCAGC +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGPDSPN*SSIICS
Trigger: GCTGCATATGATAGATGACAAATTGGGGCTGTCGGG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGGAGCTCCCTGGGATTaGCCACCCATCACAATGGTT +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPGAPWD*PPITMV
Trigger: AACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAGATTGCTGGGGCCGCTaGCCCATTTCCCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSDCWGR*PISQAH
Trigger: GTGGGCTTGGGAAATGGGCAAGCGGCCCCAGCAATC...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCATCAACACATCCTATTaGTATGTGCCCCCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSINTSY*YVPPRE
Trigger: CTCCCTTGGGGGCACATACAAATAGGATGTGTTGAT...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCCCCTGTGGCAACAGTaGCTACTGAAGGGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: AINGPNPPNQLATSLWPFPLWQQ*LLKGQE
Trigger: TTCCTGACCCTTCAGTAGCAACTGTTGCCACAGGGG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTGCAGTGCCATTGCCATaGCTCCAGGAGAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTAVPLP*LQERAA
Trigger: GGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGC...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGACGAGGTACCGGAAGTaGATGAGCAGGTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: GAPWDLPPITMVSDILEGTRYRK*MSRSVV
Trigger: CACCACTGACCTGCTCATCAACTTCCGGTACCTCGT...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGGGAGCTCCCTGGGATTaGCCACCCATCACAATGGTT +
Preference number: 5 (lower is better)
Translates to: GAPWDLPPITMVSDILEGGAPWD*PPITMV
Trigger: AACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGCTGGCCACCAGTCTTaGGCCCTTTCATTGACACCC +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRAGHQS*ALSLTP
Trigger: GGGTGTCAATGAAAGGGCCAAAGACTGGTGGCCAGC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACCCCTGTGGCAACAGTaGCTACTGAAGGGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGPLWQQ*LLKGQE
Trigger: TTCCTGACCCTTCAGTAGCAACTGTTGCCACAGGGG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCCAAGGGGTCTCCCTTaGTCTTATTTGATTGTAGAA +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSPRGLP*SYLIVE
Trigger: TTCTACAATCAAATAAGACAAAGGGAGACCCCTTGG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTGTGCCATTCGCTGCTaGGGAATAAACGGTGGCATT +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPCAIRC*GINGGI
Trigger: AATGCCACCGTTTATTCCCAAGCAGCGAATGGCACA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTCACTGACGTTGAGATaGGAAGAATCTGTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPSLTLR*EESVSP
Trigger: GGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCGAGGCTCACTGACGTaGAGATTGGAAGAATCTGTC +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPRGSLT*RLEESV
Trigger: GACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCTCTGAGGCTCCCTTTTaGAAATCCTCATACGTGTAT +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSSEAPF*KSSYVY
Trigger: ATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGA...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTATCTGCGAACCCACAGTaGGAGTCAGCTTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVSANPQ*ESACCF
Trigger: GAAGCAGCAAGCTGACTCCAACTGTGGGTTCGCAGA...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGATGGTTTCGGACATATaGGAGGGGAGAGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGMVSDI*EGRGPQ
Trigger: CTGTGGCCCTCTCCCCTCCAATATGTCCGAAACCAT...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGCTACTGGGAGTTTTTaGAGATGCCCCATCAGTCCC +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRATGSF*RCPISP
Trigger: GGGACTGATGGGGCATCTCAAAAAACTCCCAGTAGC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCCAAGTTAAGATCACATaGGTTGGACTGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSQVKIT*VGLMET
Trigger: TGTTTCCATCAGTCCAACCAATGTGATCTTAACTTG...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCGATGTTACACCATGGTaGATGCACAACAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSDVTPW*MHNSNC
Trigger: ACAATTACTGTTGTGCATCAACCATGGTGTAACATC...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGCAGTGCCATTGCCATaGCTCCAGGAGAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTAVPLP*LQERAA
Trigger: GGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCTGGGAACAGTTCTATaGCAAACTGTCCGAGATGCC +
Preference number: 5 (lower is better)
Translates to: AINGPNPPNQLATSLWPFLGTVL*QTVRDA
Trigger: GGCATCTCGGACAGTTTGCAATAGAACTGTTCCCAG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTGATCCCATCCCCTACTaGTGCAAAGATCTCCACTGT +
Preference number: 5 (lower is better)
Translates to: AINGPNPPNQLATSLWPFDPIPY*CKDLHC
Trigger: ACAGTGGAGATCTTTGCACAAGTAGGGGATGGGATC...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTGTGGTGATGCTGATGTaGTACGAGGTAGAAAAATTC +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGVVMLM*YEVEKF
Trigger: GAATTTTTCTACCTCGTACAACATCAGCATCACCAC...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGGGTGGAAGGTAATGTaGGTGAAGCCAGCCACACAA +
Preference number: 5 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVGWKVM*VKPATQ
Trigger: TTGTGTGGCTGGCTTCACCAACATTACCTTCCACCC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTaGGAATTAGGCGATGTAACC +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSRKVIP*ELGDVT
Trigger: GGTTACATCGCCTAATTCCAAAGGAATAACCTTTCT...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTCCCGACAGCCCCAATTaGTCATCTATCATATGCAGC +
Preference number: 5 (lower is better)
Translates to: AINGPNPPNQLATSLWPFPDSPN*SSIICS
Trigger: GCTGCATATGATAGATGACAAATTGGGGCTGTCGGG...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GCACATGTTCAAATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGATGGTTTCGGACATATaGGAGGGGAGAGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: AHVQIENPFGRGATYPSLMVSDI*EGRGPQ
Trigger: CTGTGGCCCTCTCCCCTCCAATATGTCCGAAACCAT...CAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GGAGCTCCCTGGGATTTGCCACCCATCACAATGGTTTCGGACATATTGGAGGGGGGAGGCAAAAAGTCGTaGTTCCTGGGAGATGCTATC +
Preference number: 5 (lower is better)
Translates to: GAPWDLPPITMVSDILEGGGKKS*FLGDAI
Trigger: GATAGCATCTCCCAGGAACAACGACTTTTTGCCTCC...CCCCTCCAATATGTCCGAAACCATTGTGATGGGTGGCAAATCCCAGGGAGCTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACATCCTCACTGGTGTTaGTTTCCACCTGAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGHPHWC*FPPEVF
Trigger: GAACACCTCAGGTGGAAACAAACACCAGTGAGGATG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGTTCTTAAACTATCGTaGGCTCCAGAGCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPVLKLS*APELSP
Trigger: TGGTGAAAGCTCTGGAGCCAACGATAGTTTAAGAAC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCAAGTTAAGATCACATaGGTTGGACTGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGQVKIT*VGLMET
Trigger: TGTTTCCATCAGTCCAACCAATGTGATCTTAACTTG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTCCCCAAGTCTCATaGCCTATTCCTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRSPQVS*PIPGVM
Trigger: CATCACTCCAGGAATAGGCAATGAGACTTGGGGAGA...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGGCAGTGCCATTGCCATaGCTCCAGGAGAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQAVPLP*LQERAA
Trigger: GGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGC...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCGCAGTGCCATTGCCATaGCTCCAGGAGAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVAVPLP*LQERAA
Trigger: GGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGC...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCGGCTTCTCTCTGTATaGCTGGCATCCAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPRLLSV*LASKPP
Trigger: AGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCCG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATCACTGACGTTGAGATaGGAAGAATCTGTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGSLTLR*EESVSP
Trigger: GGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGCCCCTTCAGTCCCATTaGGTCCTTTTGGAACTATTT +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPPLQSH*VLLELF
Trigger: AAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGG...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGTTCCAGTGACTaGATCCCATCCCCTACTTGT +
Preference number: 5 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTPGSSD*IPSPTC
Trigger: ACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGG...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCTCCAGGTGGGTCGCATaGTTCCAGGCTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVSRWVA*FQAPLL
Trigger: CAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGA...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGAATGAGCCCCTTGTTTaGAGGGTGGAAGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPNEPLV*RVEGNV
Trigger: AACATTACCTTCCACCCTCAAAACAAGGGGCTCATT...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTCAATTTCTGATGTCATaGCCACAGTTATGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGQFLMS*PQLCLH
Trigger: ATGGAGACATAACTGTGGCAATGACATCAGAAATTG...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCTTTCATAGATTGTCATaGCAGTTGTGTTCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: CRHRGMCLRCGCDGLVHSFHRLS*QLCSGR
Trigger: TCTACCAGAACACAACTGCAATGACAATCTATGAAA...GGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTAGGAATGCAGATGATTaGCTCCCCACCCATCCACAG +
Preference number: 5 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTRNADD*LPTHPQ
Trigger: CTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCT...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTAATGGGTTGAAAATGTaGCCAACAGAAGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGNGLKM*PTEESL
Trigger: CAAAGACTCTTCTGTTGGCAACATTTTCAACCCATT...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCTGTTCCTGGGAGGGGTaGAAGCTCAGAGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVCSWEG*KLRGTL
Trigger: GAGGGTGCCTCTGAGCTTCAACCCCTCCCAGGAACA...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGCTGGCCACCAGTCTTaGGCCCTTTCATTGACACCC +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTAGHQS*ALSLTP
Trigger: GGGTGTCAATGAAAGGGCCAAAGACTGGTGGCCAGC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTATCAACACATCCTATTaGTATGTGCCCCCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: AINGPNPPNQLATSLWPFINTSY*YVPPRE
Trigger: CTCCCTTGGGGGCACATACAAATAGGATGTGTTGAT...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGCTACTGGGAGTTTTTaGAGATGCCCCATCAGTCCC +
Preference number: 5 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPATGSF*RCPISP
Trigger: GGGACTGATGGGGCATCTCAAAAAACTCCCAGTAGC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCAGGAGGCAGTGCCATaGCCATTGCTCCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQQEAVP*PLLQER
Trigger: TCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGGCTTCTCTCTGTATaGCTGGCATCCAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTRLLSV*LASKPP
Trigger: AGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCCG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCATCACTGACGTTGAGATaGGAAGAATCTGTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSSLTLR*EESVSP
Trigger: GGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGA...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATGGAGAGTAATCGCTTaGTCATACGTGCTTGTGTGG +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGWRVIA*SYVLVW
Trigger: CCACACAAGCACGTATGACAAAGCGATTACTCTCCA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTAGTACTTACATCAATGTaGGACACATTGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVVLTSM*DTLLGR
Trigger: ACGGCCCAGCAATGTGTCCAACATTGATGTAAGTAC...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTGTTGCTGCTGTGGTGTaGGTACTTACATCAATGTTG +
Preference number: 5 (lower is better)
Translates to: AINGPNPPNQLATSLWPFVAAVV*VLTSML
Trigger: CAACATTGATGTAAGTACCAACACCACAGCAGCAAC...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAACTACTTGTGTTGCGTaGCTGGAATTTCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGTTCVA*LEFPAF
Trigger: GAAGGCTGGAAATTCCAGCAACGCAACACAAGTAGT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGTCTGAGGCTCCCTTTTaGAAATCCTCATACGTGTAT +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPSEAPF*KSSYVY
Trigger: ATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGA...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTTTCATAGATTGTCATaGCAGTTGTGTTCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: SGHVPSLWVRRSGSLQKGFHRLS*QLCSGR
Trigger: TCTACCAGAACACAACTGCAATGACAATCTATGAAA...ACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGAGTGACCTCATCCCATaGGTCATCAGGAATGCAGAT +
Preference number: 5 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGSDLIP*VIRNAD
Trigger: ATCTGCATTCCTGATGACCAATGGGATGAGGTCACT...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATCCAATTTGAGCTCATaGTTCCTGGGAGGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGSNLSS*FLGGVE
Trigger: TTCAACCCCTCCCAGGAACAATGAGCTCAAATTGGA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTATCCAATTTGAGCTCATaGTTCCTGGGAGGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVSNLSS*FLGGVE
Trigger: TTCAACCCCTCCCAGGAACAATGAGCTCAAATTGGA...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACTGGACTCTTCCAATTaGAGCTCATTGTTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVLDSSN*SSLFLG
Trigger: TCCCAGGAACAATGAGCTCAAATTGGAAGAGTCCAG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACTGGACTCTTCCAATTaGAGCTCATTGTTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGLDSSN*SSLFLG
Trigger: TCCCAGGAACAATGAGCTCAAATTGGAAGAGTCCAG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS TCA 90 bp ACGCAGGATCTGTACAGAATGACTTCCGGCCAGGTTCCAGTGACTTaGTCCCATCCCCTACTTGTGCAAAGATCTCCACTGTGTATGATG +
Preference number: 5 (lower is better)
Translates to: TQDLYRMTSGQVPVT*SHPLLVQRSPLCMM
Trigger: CATCATACACAGTGGAGATCTTTGCACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGGAAGTCATTCTGTACAGATCCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGTTCTTAAACTATCGTaGGCTCCAGAGCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRVLKLS*APELSP
Trigger: TGGTGAAAGCTCTGGAGCCAACGATAGTTTAAGAAC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGCTACTGGGAGTTTTTaGAGATGCCCCATCAGTCCC +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTATGSF*RCPISP
Trigger: GGGACTGATGGGGCATCTCAAAAAACTCCCAGTAGC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATCCACAGCCCCCGGATGTTACACCATGGTaGATGCACAACAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: PLVIRNADDLLPTHPQPPDVTPW*MHNSNC
Trigger: ACAATTACTGTTGTGCATCAACCATGGTGTAACATC...CGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGCCCCTTCAGTCCCATTaGGTCCTTTTGGAACTATTT +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRPLQSH*VLLELF
Trigger: AAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGG...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTTGGAGAGTAATCGCTTaGTCATACGTGCTTGTGTGG +
Preference number: 5 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTWRVIA*SYVLVW
Trigger: CCACACAAGCACGTATGACAAAGCGATTACTCTCCA...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTCAATGTTGGACACATaGCTGGGCCGTGTGTACTGT +
Preference number: 5 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPSMLDT*LGRVYC
Trigger: ACAGTACACACGGCCCAGCAATGTGTCCAACATTGA...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAAATGTCCGTGACTACTaGTGTTGCGTTGCTGGAATT +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGNVRDY*CCVAGI
Trigger: AATTCCAGCAACGCAACACAAGTAGTCACGGACATT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGAATGTCCGTGACTACTaGTGTTGCGTTGCTGGAATT +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRNVRDY*CCVAGI
Trigger: AATTCCAGCAACGCAACACAAGTAGTCACGGACATT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGATCCCATCCCCTACTaGTGCAAAGATCTCCACTGT +
Preference number: 5 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPDPIPY*CKDLHC
Trigger: ACAGTGGAGATCTTTGCACAAGTAGGGGATGGGATC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAAGCTCAAAGCCTGCATaGGCGCCAGGAGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGSSKPA*APGGQV
Trigger: GACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGCT...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGGGTGGAAGGTAATGTaGGTGAAGCCAGCCACACAA +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTGWKVM*VKPATQ
Trigger: TTGTGTGGCTGGCTTCACCAACATTACCTTCCACCC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAGGGAATGAGCCCCTTGTTTaGAGGGTGGAAGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: CPVYSRTHYCGNSHRTPGNEPLV*RVEGNV
Trigger: AACATTACCTTCCACCCTCAAAACAAGGGGCTCATT...CCCTGGAGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCAGGAATGCAGATGATTaGCTCCCCACCCATCCACAG +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTRNADD*LPTHPQ
Trigger: CTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CACACCTGTCCTGTTTACAGCAGGACACATTACTGTGGCAACAGCCACAGGACTCCAACAGAAGAGTCTTaGGAGAAAACTGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: HTCPVYSRTHYCGNSHRTPTEES*EKTGRE
Trigger: TTCCCTCCCAGTTTTCTCCAAAGACTCTTCTGTTGG...AGTCCTGTGGCTGTTGCCACAGTAATGTGTCCTGCTGTAAACAGGACAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACACCCAACCAATGGGTaGAAAATGTTGCCAACAGAA +
Preference number: 5 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVHPTNG*KMLPTE
Trigger: TTCTGTTGGCAACATTTTCAACCCATTGGTTGGGTG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGGCTAGTCTGCAACTGTaGGGCCAAGCAATCCTCCTG +
Preference number: 5 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQASLQL*GQAILL
Trigger: CAGGAGGATTGCTTGGCCCAACAGTTGCAGACTAGC...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS TCA 90 bp ATTTCTACCCGAGAATTGCCAGCTCCCTCCTGTGTGATATGCATCTaGAATGATTCTGCATCATGGCTGCTCCATGCTAAGCCGATCTCC +
Preference number: 5 (lower is better)
Translates to: ISTRELPAPSCVICI*NDSASWLLHAKPIS
Trigger: GGAGATCGGCTTAGCATGGAGCAGCCATGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp CTGATGTCATTGCCACAGTTATGTCTCCATAGTCCTGAGCCTGCTTaGAGGGCCAATACTCCTCACATTTGGTTCTTCCCTGTTCAACAC +
Preference number: 5 (lower is better)
Translates to: LMSLPQLCLHSPEPA*RANTPHIWFFPVQH
Trigger: GTGTTGAACAGGGAAGAACCAAATGTGAGGAGTATTGGCCCTCCAAGCAGGCTCAGGACTATGGAGACATAACTGTGGCAATGACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTATGCTTTACTACATACTaGTACTCAGAAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVCFTTY*YSEAAV
Trigger: CACAGCTGCTTCTGAGTACAAGTATGTAGTAAAGCA...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGATGCTTTACTACATACTaGTACTCAGAAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGCFTTY*YSEAAV
Trigger: CACAGCTGCTTCTGAGTACAAGTATGTAGTAAAGCA...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGAGGCTCACTGACGTaGAGATTGGAAGAATCTGTC +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTRGSLT*RLEESV
Trigger: GACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCATTTCTACCCGAGAATaGCCAGCTCCCTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVISTRE*PAPSCV
Trigger: CACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAAT...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGATTTCAAAGCAATACTaGGTTCCAGGGAACAAGCCA +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRISKQY*VPGNKP
Trigger: TGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAAT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCTGGGAACAGTTCTATaGCAAACTGTCCGAGATGCC +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTLGTVL*QTVRDA
Trigger: GGCATCTCGGACAGTTTGCAATAGAACTGTTCCCAG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGGTGGTGATGCTGATGTaGTACGAGGTAGAAAAATTC +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRVVMLM*YEVEKF
Trigger: GAATTTTTCTACCTCGTACAACATCAGCATCACCAC...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCGGGTGGAAGGTAATGTaGGTGAAGCCAGCCACACAA +
Preference number: 5 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVGWKVM*VKPATQ
Trigger: TTGTGTGGCTGGCTTCACCAACATTACCTTCCACCC...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCACAGTTGGAGTCAGCTaGCTGCTTCTTGAAGTAGGC +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTTVGVS*LLLEVG
Trigger: GCCTACTTCAAGAAGCAGCAAGCTGACTCCAACTGT...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAGAGGGTGACTCTCACTaGTCTGGATATTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSEGDSH*SGYFSL
Trigger: CAGTGAAAAATATCCAGACAAGTGAGAGTCACCCTC...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAACCAACAGAAGAGTCTTaGGAGAAAACTGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQPTEES*EKTGRE
Trigger: TTCCCTCCCAGTTTTCTCCAAAGACTCTTCTGTTGG...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CTGCTGCCTGAACAGGGACCTATGAATGAAGTACCGACCGCTCCGAGATCTGTACTTTTCTGTATGCAATaGTCAAAGACTGAACAGGGG +
Preference number: 5 (lower is better)
Translates to: LLPEQGPMNEVPTAPRSVLFCMQ*SKTEQG
Trigger: CCCCTGTTCAGTCTTTGACAATTGCATACAGAAAAG...TACAGATCTCGGAGCGGTCGGTACTTCATTCATAGGTCCCTGTTCAGGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAATCTTTGGCCCTTTCATaGACACCCAAACCCATACCA +
Preference number: 5 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQSLALS*TPKPIP
Trigger: TGGTATGGGTTTGGGTGTCAATGAAAGGGCCAAAGA...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS TCA 90 bp GTATTGAACCCCTGGCTTCAGGCCCGAGATATTGACCTGAAGTCTTaGGTCTTGAGTCAACTCCTCATGGCTTCCAATGCTTTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: VLNPWLQARDIDLKS*VLSQLLMASNAFKK
Trigger: CTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGAAGCCAGGGGTTCAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 90 bp AGAATCTGTCTCCCCCGCCACATGTATCTTGTAGGTATAGTTAGATaGCGACTCGTTATCGCTGACTTTCCAGATCAGGGTCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: RICLPRHMYLVGIVR*RLVIADFPDQGQAC
Trigger: ACAAGCCTGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGAGACAGATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 90 bp GGTTGGTGGTTATTTCTACCCGAGAATTGCCAGCTCCCTCCTGTGTaGTATGCATCTGAAATGATTCTGCATCATGGCTGCTCCATGCTA +
Preference number: 5 (lower is better)
Translates to: GWWLFLPENCQLPPV*YASEMILHHGCSML
Trigger: TAGCATGGAGCAGCCATGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 90 bp CCGTGGCTGGCTTCAAATCCACTGAACTTGACCTTTACTGAATTGTaGCTGACAGATGTAATATTAGGGGATCCATCTGGAGGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: PWLASNPLNLTFTEL*LTDVILGDPSGGGG
Trigger: TCCCCCTCCTCCAGATGGATCCCCTAATATTACATCTGTCAGTCACAATTCAGTAAAGGTCAAGTTCAGTGGATTTGAAGCCAGCCACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GCTATCAATGGCCCAAATCCCCCAAACCAGCTGGCCACCAGTCTTTGGCCCTTTATGATAATACTTTGGTaGGTGGTTATTTCTACCCGA +
Preference number: 5 (lower is better)
Translates to: AINGPNPPNQLATSLWPFMIILW*VVISTR
Trigger: TCGGGTAGAAATAACCACCAACCAAAGTATTATCAT...AAAGGGCCAAAGACTGGTGGCCAGCTGGTTTGGGGGATTTGGGCCATTGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTGGAGAGTAATCGCTTaGTCATACGTGCTTGTGTGG +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTWRVIA*SYVLVW
Trigger: CCACACAAGCACGTATGACAAAGCGATTACTCTCCA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGTACTTACATCAATGTaGGACACATTGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTVLTSM*DTLLGR
Trigger: ACGGCCCAGCAATGTGTCCAACATTGATGTAAGTAC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACACCAGGGCTGGCTCTTaGGGGACCACTTCGCAGTCG +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNTRAGS*GTTSQS
Trigger: CGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCTGGT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAAGCTCAAAGCCTGCATaGGCGCCAGGAGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKSSKPA*APGGQV
Trigger: GACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGCT...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACAATTTCTGATGTCATaGCCACAGTTATGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGQFLMS*PQLCLH
Trigger: ATGGAGACATAACTGTGGCAATGACATCAGAAATTG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCGAGGGTGACTCTCACTaGTCTGGATATTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPEGDSH*SGYFSL
Trigger: CAGTGAAAAATATCCAGACAAGTGAGAGTCACCCTC...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ACATATAAAAACATGTCGACATCGGGGCATGTGCCTTCGCTGTGGGTGCGACGGAATGGGTTGAAAATGTaGCCAACAGAAGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: TYKNMSTSGHVPSLWVRRNGLKM*PTEESL
Trigger: CAAAGACTCTTCTGTTGGCAACATTTTCAACCCATT...CCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTCTTTGGCCCTTTCATaGACACCCAAACCCATACCA +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTSLALS*TPKPIP
Trigger: TGGTATGGGTTTGGGTGTCAATGAAAGGGCCAAAGA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCTACCTTGGAGACCCCTaGAAAGAACCTAGGGATCCC +
Preference number: 5 (lower is better)
Translates to: INISGFTSHTFSAATTQFYLGDP*KEPRDP
Trigger: GGGATCCCTAGGTTCTTTCAAGGGGTCTCCAAGGTA...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS GCA 90 bp TTCCACCTGAGGTGTTCCAGTTCCATTCTGTTTATGAAAGGATTCTaGTGTACTGCTGATCTGCGTTATGCCATTTTCCCCTGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: FHLRCSSSILFMKGF*CTADLRYAIFPCGN
Trigger: GTTGCCACAGGGGAAAATGGCATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000526550.1
ENST00000527952.1
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATACCCCTGTGGCAACAGTaGCTACTGAAGGGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIPLWQQ*LLKGQE
Trigger: TTCCTGACCCTTCAGTAGCAACTGTTGCCACAGGGG...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAATGCTTTACTACATACTaGTACTCAGAAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQCFTTY*YSEAAV
Trigger: CACAGCTGCTTCTGAGTACAAGTATGTAGTAAAGCA...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGCAGGAGGCAGTGCCATaGCCATTGCTCCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKQEAVP*PLLQER
Trigger: TCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTG...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCACGGGTTGATGTTGTATaGAACCCCTGGCTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPRVDVV*NPWLQA
Trigger: GGCCTGAAGCCAGGGGTTCAATACAACATCAACCCG...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATACGGCTTCTCTCTGTATaGCTGGCATCCAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIRLLSV*LASKPP
Trigger: AGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCCG...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCTGTGCCATTCGCTGCTaGGGAATAAACGGTGGCATT +
Preference number: 5 (lower is better)
Translates to: INISGFTSHTFSAATTQFCAIRC*GINGGI
Trigger: AATGCCACCGTTTATTCCCAAGCAGCGAATGGCACA...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAATGATAATACTTTGGTaGGTGGTTATTTCTACCCGA +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGMIILW*VVISTR
Trigger: TCGGGTAGAAATAACCACCAACCAAAGTATTATCAT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCATTTCAAAGCAATACTaGGTTCCAGGGAACAAGCCA +
Preference number: 5 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPISKQY*VPGNKP
Trigger: TGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAAT...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCGTTGCTGCTGTGGTGTaGGTACTTACATCAATGTTG +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTVAAVV*VLTSML
Trigger: CAACATTGATGTAAGTACCAACACCACAGCAGCAAC...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAATCTGAGGCTCCCTTTTaGAAATCCTCATACGTGTAT +
Preference number: 5 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQSEAPF*KSSYVY
Trigger: ATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGA...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCAAGAAAGGTTATTCCTTaGGAATTAGGCGATGTAACC +
Preference number: 5 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSRKVIP*ELGDVT
Trigger: GGTTACATCGCCTAATTCCAAAGGAATAACCTTTCT...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCACCCAACCAATGGGTaGAAAATGTTGCCAACAGAA +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTHPTNG*KMLPTE
Trigger: TTCTGTTGGCAACATTTTCAACCCATTGGTTGGGTG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GAGGCAAAAAGTCGTTGTTCCTGGGAGATGCTATCAATGGCCCAAATCCCCCAATCACTAGATCCAACTTaGGAGGCAAAAAGTCGTTGT +
Preference number: 5 (lower is better)
Translates to: EAKSRCSWEMLSMAQIPQSLDPT*EAKSRC
Trigger: ACAACGACTTTTTGCCTCCAAAGTTGGATCTAGTGA...TTGGGGGATTTGGGCCATTGATAGCATCTCCCAGGAACAACGACTTTTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGAAACAGTCACCAAGACTaGTTTAGCTCAATAAGTACA +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGNSHQD*FSSIST
Trigger: TGTACTTATTGAGCTAAACAAGTCTTGGTGACTGTT...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CCTTCGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTTGGACAGGACTTAAAACTTTaGAGGCAAATCAACAACAGT +
Preference number: 5 (lower is better)
Translates to: PSLWVRRSGSLQKGYSFGQDLKL*RQINNS
Trigger: ACTGTTGTTGATTTGCCTCAAAAGTTTTAAGTCCTG...TCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS TCA 90 bp GTGTTCCAGTTCCATTCTGTTTATGAAAGGATTCTGCTGTACTGCTaGTCTGCGTTATGCCATTTTCCCCTGTGGCAACAGTTGCTACTG +
Preference number: 5 (lower is better)
Translates to: VFQFHSVYERILLYC*SALCHFPLWQQLLL
Trigger: CAGTAGCAACTGTTGCCACAGGGGAAAATGGCATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000526550.1
ENST00000527952.1
ENST00000613246.4
ENST00000615445.4
CDS GCA 90 bp GTCAAACACTGCACTGGGAACAGTTCTATTGCAAACTGTCCGAGATaGCCCTTCAGTCCCATTTGGTCCTTTTGGAACTATTTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: VKHCTGNSSIANCPR*PFSPIWSFWNYFKA
Trigger: TGCTTTGAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGTTCCCAGTGCAGTGTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp AAGCAATACTTGGTTCCAGGGAACAAGCCACCAATGATAATACTTTaGTTGGTGGTTATTTCTACCCGAGAATTGCCAGCTCCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: KQYLVPGNKPPMIIL*LVVISTRELPAPSC
Trigger: ACAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAAGTATTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGCTACTGGGAGTTTTTaGAGATGCCCCATCAGTCCC +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIATGSF*RCPISP
Trigger: GGGACTGATGGGGCATCTCAAAAAACTCCCAGTAGC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp AAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCCAAGTTAAGATCACATaGGTTGGACTGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: KVTSSHWSSGMQMICSPPQVKIT*VGLMET
Trigger: TGTTTCCATCAGTCCAACCAATGTGATCTTAACTTG...GGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCAGGAGGCAGTGCCATaGCCATTGCTCCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNQEAVP*PLLQER
Trigger: TCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TTACAAAAACAGACAATGAGCCAAATTTGGCATAGGGGCCATTCTTATCTGCCAATTTCTACCCGAGAATaGCCAGCTCCCTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: LQKQTMSQIWHRGHSYLPISTRE*PAPSCV
Trigger: CACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAAT...TGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp AATAGAAAACCCATTCGGAAGAGGTGCCACGTACCCCTCCCTGCGCAATCATCACAACTTCATTGCCTATaGGAGGATAAACTCAAAACA +
Preference number: 5 (lower is better)
Translates to: NRKPIRKRCHVPLPAQSSQLHCL*EDKLKT
Trigger: TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTG...TGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS GCA 90 bp AGGCAGGTGTTCAAATCATCCAGTTCTATTGCAAACTGTCCGAGATaGCCCTTCAGTCCCATTTGGTCCTTTTGGAACTATTTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: RQVFKSSSSIANCPR*PFSPIWSFWNYFKA
Trigger: TGCTTTGAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGGATGATTTGAACACCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS CCA 90 bp TCCAGTTCTATTGCAAACTGTCCGAGATGCCCCTTCAGTCCCATTTaGTCCTTTTGGAACTATTTCAAAGCAATACTTGGTTCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: SSSIANCPRCPFSPI*SFWNYFKAILGSRE
Trigger: TTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCGTTCTTAAACTATCGTaGGCTCCAGAGCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: INISGFTSHTFSAATTQFVLKLS*APELSP
Trigger: TGGTGAAAGCTCTGGAGCCAACGATAGTTTAAGAAC...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATATCTCCCCAAGTCTCATaGCCTATTCCTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGISPQVS*PIPGVM
Trigger: CATCACTCCAGGAATAGGCAATGAGACTTGGGGAGA...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACGGGTTGATGTTGTATaGAACCCCTGGCTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKRVDVV*NPWLQA
Trigger: GGCCTGAAGCCAGGGGTTCAATACAACATCAACCCG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GCCCTTTCATTGACACCCAAACCCATACCAGCTGCTTTTCTGTATGCAATTGTCCCAAGGGGTCTCCCTTaGTCTTATTTGATTGTAGAA +
Preference number: 5 (lower is better)
Translates to: ALSLTPKPIPAAFLYAIVPRGLP*SYLIVE
Trigger: TTCTACAATCAAATAAGACAAAGGGAGACCCCTTGG...GACAATTGCATACAGAAAAGCAGCTGGTATGGGTTTGGGTGTCAATGAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCCAAGGGGTCTCCCTTaGTCTTATTTGATTGTAGAA +
Preference number: 5 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQPRGLP*SYLIVE
Trigger: TTCTACAATCAAATAAGACAAAGGGAGACCCCTTGG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATATCACTGACGTTGAGATaGGAAGAATCTGTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGISLTLR*EESVSP
Trigger: GGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGA...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATACGAGGCTCACTGACGTaGAGATTGGAAGAATCTGTC +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIRGSLT*RLEESV
Trigger: GACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCG...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACTCTGCGAACCCACAGTaGGAGTCAGCTTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNSANPQ*ESACCF
Trigger: GAAGCAGCAAGCTGACTCCAACTGTGGGTTCGCAGA...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCCAATTTCTGATGTCATaGCCACAGTTATGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTQFLMS*PQLCLH
Trigger: ATGGAGACATAACTGTGGCAATGACATCAGAAATTG...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACACGAGGTACCGGAAGTaGATGAGCAGGTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNTRYRK*MSRSVV
Trigger: CACCACTGACCTGCTCATCAACTTCCGGTACCTCGT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGAGGAATGCAGATGATTaGCTCCCCACCCATCCACAG +
Preference number: 5 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKRNADD*LPTHPQ
Trigger: CTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCT...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTAGTGACCTCATCCCATaGGTCATCAGGAATGCAGAT +
Preference number: 5 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFSDLIP*VIRNAD
Trigger: ATCTGCATTCCTGATGACCAATGGGATGAGGTCACT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS TCA 90 bp TTTCACTGTGAAATCTCTGATGGTCCATTCCGGAAGAACAATTTCTaGTGTCATTGCCACAGTTATGTCTCCATAGTCCTGAGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: FHCEISDGPFRKNNF*CHCHSYVSIVLSLL
Trigger: AAGCAGGCTCAGGACTATGGAGACATAACTGTGGCAATGACATCAGAAATTGTTCTTCCGGAATGGACCATCAGAGATTTCACAGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp AACAGTTCTATTGCAAACTGTCCGAGATGCCCCTTCAGTCCCATTTaGTCCTTTTGGAACTATTTCAAAGCAATACTTGGTTCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: NSSIANCPRCPFSPI*SFWNYFKAILGSRE
Trigger: TTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp TCACTCCAGAAAGGTTATTCCTTTGGAATTAGGCGATGTAACCATTaGTCTTTCCAAATGTGGTCACGGGCGCAAGGTTTTCATAGATTG +
Preference number: 5 (lower is better)
Translates to: SLQKGYSFGIRRCNH*SFQMWSRAQGFHRL
Trigger: CAATCTATGAAAACCTTGCGCCCGTGACCACATTTGGAAAGACCAATGGTTACATCGCCTAATTCCAAAGGAATAACCTTTCTGGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGTCTCCCCAAGTCTCATaGCCTATTCCTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKSPQVS*PIPGVM
Trigger: CATCACTCCAGGAATAGGCAATGAGACTTGGGGAGA...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACACGGGTTGATGTTGTATaGAACCCCTGGCTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTRVDVV*NPWLQA
Trigger: GGCCTGAAGCCAGGGGTTCAATACAACATCAACCCG...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGTGTGCCATTCGCTGCTaGGGAATAAACGGTGGCATT +
Preference number: 5 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKCAIRC*GINGGI
Trigger: AATGCCACCGTTTATTCCCAAGCAGCGAATGGCACA...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCATTTCAAAGCAATACTaGGTTCCAGGGAACAAGCCA +
Preference number: 5 (lower is better)
Translates to: INISGFTSHTFSAATTQFISKQY*VPGNKP
Trigger: TGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAAT...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTCCCCTTCAGTCCCATTaGGTCCTTTTGGAACTATTT +
Preference number: 5 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFPLQSH*VLLELF
Trigger: AAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGG...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGCTGGGAACAGTTCTATaGCAAACTGTCCGAGATGCC +
Preference number: 5 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKLGTVL*QTVRDA
Trigger: GGCATCTCGGACAGTTTGCAATAGAACTGTTCCCAG...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGACAGTTGGAGTCAGCTaGCTGCTTCTTGAAGTAGGC +
Preference number: 5 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKTVGVS*LLLEVG
Trigger: GCCTACTTCAAGAAGCAGCAAGCTGACTCCAACTGT...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACATCTGCGAACCCACAGTaGGAGTCAGCTTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTSANPQ*ESACCF
Trigger: GAAGCAGCAAGCTGACTCCAACTGTGGGTTCGCAGA...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp AAAAGTGACCTCATCCCATTGGTCATCAGGAATGCAGATGATTTGCTCCCCACCTTTCATAGATTGTCATaGCAGTTGTGTTCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: KSDLIPLVIRNADDLLPTFHRLS*QLCSGR
Trigger: TCTACCAGAACACAACTGCAATGACAATCTATGAAA...GGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 90 bp CGATTCTTTCCTCTATTCTCAGCCAGTTCTGCTGCATATTTAGGTTaGCTAATTCCAACAAGCTTCAGATCTTCGTATTCCTCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: RFFPLFSASSAAYLG*LIPTSFRSSYSSAN
Trigger: GTTCGCAGAGGAATACGAAGATCTGAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAGAATAGAGGAAAGAATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 90 bp TATTCCTTTGGAATTAGGCGATGTAACCATTGGTCTTTCCAAATGTaGTCACGGGCGCAAGGTTTTCATAGATTGTCATTGCAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: YSFGIRRCNHWSFQM*SRAQGFHRLSLQLC
Trigger: ACACAACTGCAATGACAATCTATGAAAACCTTGCGCCCGTGACCACATTTGGAAAGACCAATGGTTACATCGCCTAATTCCAAAGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ATAAATATCTCAGGCTTCACAAGCCACACGTTCTCTGCTGCCACTACTCAATTCCAAGTTAAGATCACATaGGTTGGACTGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: INISGFTSHTFSAATTQFQVKIT*VGLMET
Trigger: TGTTTCCATCAGTCCAACCAATGTGATCTTAACTTG...GAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGATGATAATACTTTGGTaGGTGGTTATTTCTACCCGA +
Preference number: 5 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQMIILW*VVISTR
Trigger: TCGGGTAGAAATAACCACCAACCAAAGTATTATCAT...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp CTGACCAACCCCCAGCCTGTGTGTCCTTTATATTTACACATTAATCTTCCCTTTATTTCAAAGCAATACTaGGTTCCAGGGAACAAGCCA +
Preference number: 5 (lower is better)
Translates to: LTNPQPVCPLYLHINLPFISKQY*VPGNKP
Trigger: TGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAAT...AAAGGGAAGATTAATGTGTAAATATAAAGGACACACAGGCTGGGGGTTGGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATACCCCTTCAGTCCCATTaGGTCCTTTTGGAACTATTT +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIPLQSH*VLLELF
Trigger: AAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGG...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACTCAATGTTGGACACATaGCTGGGCCGTGTGTACTGT +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNSMLDT*LGRVYC
Trigger: ACAGTACACACGGCCCAGCAATGTGTCCAACATTGA...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACACCAGGTTCCAGTGACTaGATCCCATCCCCTACTTGT +
Preference number: 5 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTPGSSD*IPSPTC
Trigger: ACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGG...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGAGGGTGACTCTCACTaGTCTGGATATTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGEGDSH*SGYFSL
Trigger: CAGTGAAAAATATCCAGACAAGTGAGAGTCACCCTC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAAATCATCCAGTTCTATaGCAAACTGTCCGAGATGCC +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGINHPVL*QTVRDA
Trigger: GGCATCTCGGACAGTTTGCAATAGAACTGGATGATT...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp TGGCATAGGGGCCATTCTTATCTGCCAACTCTGTTTCAGATGATGGAATTCCAGCATATCGGATCAAAGTaGGAAAACTCCAAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: WHRGHSYLPTLFQMMEFQHIGSK*ENSKRE
Trigger: TTCTCTTTTGGAGTTTTCCAACTTTGATCCGATATG...CTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATATGCTTTACTACATACTaGTACTCAGAAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGICFTTY*YSEAAV
Trigger: CACAGCTGCTTCTGAGTACAAGTATGTAGTAAAGCA...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACAGTGACCTCATCCCATaGGTCATCAGGAATGCAGAT +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNSDLIP*VIRNAD
Trigger: ATCTGCATTCCTGATGACCAATGGGATGAGGTCACT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATCACTAGATCCAACTTaGGAGGCAAAAAGTCGTTGT +
Preference number: 5 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGSLDPT*EAKSRC
Trigger: ACAACGACTTTTTGCCTCCAAAGTTGGATCTAGTGA...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS TCA 90 bp ACATATGAAGTCGCTGGACGTAAGCCTGTGATGTTACACCATGGTTaGTGCACAACAGTAATTGTCTTCTCATTTTCCATCTTATGCTTT +
Preference number: 5 (lower is better)
Translates to: TYEVAGRKPVMLHHG*CTTVIVFSFSILCF
Trigger: AAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGTGCATCAACCATGGTGTAACATCACAGGCTTACGTCCAGCGACTTCATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000534219.5
ENST00000613246.4
ENST00000615445.4
CDS TCA 90 bp ACGTCCCTTTTCTTCTGTTCTTATGAGGTATGTCACATAAGTATCTaGGGCTCCCTTTTTGAAATCCTCATACGTGTATTTCAGGACATC +
Preference number: 5 (lower is better)
Translates to: TSLFFCSYEVCHISI*GSLFEILIRVFQDI
Trigger: GATGTCCTGAAATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGATACTTATGTGACATACCTCATAAGAACAGAAGAAAAGGGACGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp GGGACTTGGTTATTCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGAGATGTTACACCATGGTaGATGCACAACAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: GTWLFLHKTLSTSLPIGGDVTPW*MHNSNC
Trigger: ACAATTACTGTTGTGCATCAACCATGGTGTAACATC...TCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGAATAACCAAGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTACATTAGGTATAGATGTTACACCATGGTaGATGCACAACAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: HVPCWCAAPINSSFTLGIDVTPW*MHNSNC
Trigger: ACAATTACTGTTGTGCATCAACCATGGTGTAACATC...TATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACGTTGCTGCTGTGGTGTaGGTACTTACATCAATGTTG +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNVAAVV*VLTSML
Trigger: CAACATTGATGTAAGTACCAACACCACAGCAGCAAC...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCCTTCATAAAACCTTGTCAACTTCATTGCCTATTGGAGGATAAACTCAAAACAACTACTTGTGTTGCGTaGCTGGAATTTCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SFIKPCQLHCLLEDKLKTTTCVA*LEFPAF
Trigger: GAAGGCTGGAAATTCCAGCAACGCAACACAAGTAGT...TGTTTTGAGTTTATCCTCCAATAGGCAATGAAGTTGACAAGGTTTTATGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACAATGTCCGTGACTACTaGTGTTGCGTTGCTGGAATT +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNNVRDY*CCVAGI
Trigger: AATTCCAGCAACGCAACACAAGTAGTCACGGACATT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACAATGAGCCCCTTGTTTaGAGGGTGGAAGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNNEPLV*RVEGNV
Trigger: AACATTACCTTCCACCCTCAAAACAAGGGGCTCATT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp ATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAGCTTTTCTGTATGCAATaGTCAAAGACTGAACAGGGG +
Preference number: 5 (lower is better)
Translates to: IYIYTVDSDMCHGRERRKLFCMQ*SKTEQG
Trigger: CCCCTGTTCAGTCTTTGACAATTGCATACAGAAAAG...CTTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACCCAAGGGGTCTCCCTTaGTCTTATTTGATTGTAGAA +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNPRGLP*SYLIVE
Trigger: TTCTACAATCAAATAAGACAAAGGGAGACCCCTTGG...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACGTGGTGATGCTGATGTaGTACGAGGTAGAAAAATTC +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNVVMLM*YEVEKF
Trigger: GAATTTTTCTACCTCGTACAACATCAGCATCACCAC...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACAGAAAGGTTATTCCTTaGGAATTAGGCGATGTAACC +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNRKVIP*ELGDVT
Trigger: GGTTACATCGCCTAATTCCAAAGGAATAACCTTTCT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 90 bp ATAGATTGTCATTGCAGTTGTGTTCTGGTAGATAAGATCTACTTTTaGGTCTTTCTGGGATCTGACAATATCCAAAACACACTGATTGAG +
Preference number: 5 (lower is better)
Translates to: IDCHCSCVLVDKIYF*VFLGSDNIQNTLIE
Trigger: CTCAATCAGTGTGTTTTGGATATTGTCAGATCCCAGAAAGACTCAAAAGTAGATCTTATCTACCAGAACACAACTGCAATGACAATCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TCATCTATCATATGCAGCTTCATGCCCTCAAAATTAGTTCTCACAAAACAGAACATGATAATACTTTGGTaGGTGGTTATTTCTACCCGA +
Preference number: 5 (lower is better)
Translates to: SSIICSFMPSKLVLTKQNMIILW*VVISTR
Trigger: TCGGGTAGAAATAACCACCAACCAAAGTATTATCAT...GTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS-3UTR CAA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAAAACAGTCACCAAGACTaGTTTAGCTCAATAAGTACA +
Preference number: 5 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKNSHQD*FSSIST
Trigger: TGTACTTATTGAGCTAAACAAGTCTTGGTGACTGTT...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS-3UTR CAA 90 bp TATATATATATACACAGTAGATTCCGATATGTGTCACGGCAGAGAGAGACGAAACAGGACTTAAAACTTTaGAGGCAAATCAACAACAGT +
Preference number: 5 (lower is better)
Translates to: YIYIHSRFRYVSRQRETKQDLKL*RQINNS
Trigger: ACTGTTGTTGATTTGCCTCAAAAGTTTTAAGTCCTG...TTTCGTCTCTCTCTGCCGTGACACATATCGGAATCTACTGTGTATATATATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418331.7
ENST00000613246.4
CDS CCA 72 bp AACACAGGACTGGGCCTGCCACCTGCGCACAGGATCTaGCCCAGGCGCAGCAGCAGCAGCAGCAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: NTGLGLPPAHRI*PRRSSSSSSGS
Trigger: GCTGCCGCTGCTGCTGCTGCTGCTGCGCCTGGGCCAGATCCTGTGCGCAGGTGGCAGGCCCAGTCCTGTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534219.5
CDS GCA 72 bp GAGGATGGGTCCACAGGTCCCACGAGGGACTCATCATaGACAGGGGCGGTGGGGCTCCCTGCCCGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: EDGSTGPTRDSS*TGAVGLPARLL
Trigger: GAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCTGTGGACCCATCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp GGAATTGGACTAGGGGTGCCACCTGCGCACAGGATCTaGCCCAGGCGCAGCAGCAGCAGCAGCAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: GIGLGVPPAHRI*PRRSSSSSSGS
Trigger: GCTGCCGCTGCTGCTGCTGCTGCTGCGCCTGGGCCAGATCCTGTGCGCAGGTGGCACCCCTAGTCCAATTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000527952.1
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp CAGGTCCCACGAGGGACTCATCATGCACAGGGGCGGTaGGGCTCCCTGCCCGGCTTCTCTCTGTATTGCTGG +
Preference number: 6 (lower is better)
Translates to: QVPRGTHHAQGR*GSLPGFSLYCW
Trigger: CCAGCAATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp AACCCGACAAGCAGGACTTCCGTGTCTCGGGACTGCTaGCCGGAGGATGGGTCCACAGGTCCCACGAGGGAC +
Preference number: 6 (lower is better)
Translates to: NPTSRTSVSRDC*PEDGSTGPTRD
Trigger: GTCCCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp GAGGGACTCATCATGCACAGGGGCGGTGGGGCTCCCTaGCCGGCTTCTCTCTGTATTGCTGGCATCCAAGCC +
Preference number: 6 (lower is better)
Translates to: EGLIMHRGGGAP*PASLCIAGIQA
Trigger: GGCTTGGATGCCAGCAATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp TCTAACCCGACAAGCAGGACTTCCGTGTCTCGGGACTaGTGGCCGGAGGATGGGTCCACAGGTCCCACGAGG +
Preference number: 6 (lower is better)
Translates to: SNPTSRTSVSRD*WPEDGSTGPTR
Trigger: CCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp TCTCCAGGTGGGTCGCATTGTTCCAGGCTCCACTGCTaGCCTCCAGCTCAAAGCCTGCATTGGCGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SPGGSHCSRLHC*PPAQSLHWRQE
Trigger: CTCCTGGCGCCAATGCAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp GCGTGCCCTCGATGTCACCTAGGACAGGACACACTGTaGTGTTGTAGAAGGTGCTGGAGCGGAGTCCGGGGA +
Preference number: 6 (lower is better)
Translates to: ACPRCHLGQDTL*CCRRCWSGVRG
Trigger: TCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCCTGTCCTAGGTGACATCGAGGGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp GTTCCAGGCTCCACTGCTGACCTCCAGCTCAAAGCCTaGATTGGCGCCAGGAGGGCAGGTCCATTTGAGAAC +
Preference number: 6 (lower is better)
Translates to: VPGSTADLQLKA*IGARRAGPFEN
Trigger: GTTCTCAAATGGACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp TCAAGAAGAACCCGGCAGGAGGCAGTGCCATTGCCATaGCTCCAGGAGAGAGCAGCCTTCCTCACACCCGTG +
Preference number: 6 (lower is better)
Translates to: SRRTRQEAVPLP*LQERAAFLTPV
Trigger: CACGGGTGTGAGGAAGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGGTTCTTCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp CGGAGTCCGGGGATGACAGCGCGAGGCTCACTGACGTaGAGATTGGAAGAATCTGTCTCCCCCGCCACATGT +
Preference number: 6 (lower is better)
Translates to: RSPGMTARGSLT*RLEESVSPATC
Trigger: ACATGTGGCGGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCGCGCTGTCATCCCCGGACTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp CCAATGCTTTCAAGAAGAACCCGGCAGGAGGCAGTGCCATTGCCATaGCTCCAGGAGAGAGCAGCCTTCCTCACACCCGTGAGGGCAACA +
Preference number: 6 (lower is better)
Translates to: PMLSRRTRQEAVPLP*LQERAAFLTPVRAT
Trigger: TGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGGTTCTTCTTGAAAGCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp CATTGCTCCAGGAGAGAGCAGCCTTCCTCACACCCGTaGGGGCAACACGGAGATCAGAAACTGGGATCGGCT +
Preference number: 6 (lower is better)
Translates to: HCSRREQPSSHP*GQHGDQKLGSA
Trigger: AGCCGATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTCCTGGAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000527952.1
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp CAGGGCTCTTCCAGTCCAGCCACATCTCCGTGGTGGTaGCGTAGACCACGTGGATGTCAAACACTGCACTGG +
Preference number: 6 (lower is better)
Translates to: QGSSSPATSPWW*RRPRGCQTLHW
Trigger: CCAGTGCAGTGTTTGACATCCACGTGGTCTACGTCACCACCACGGAGATGTGGCTGGACTGGAAGAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp GCTCTTTGGGGACCACTTCGCAGTCGAAGGAGGCCATaGACGCAGGATCTGTACAGAATGACTTCCGGCCAG +
Preference number: 6 (lower is better)
Translates to: ALWGPLRSRRRP*TQDLYRMTSGQ
Trigger: CTGGCCGGAAGTCATTCTGTACAGATCCTGCGTCCATGGCCTCCTTCGACTGCGAAGTGGTCCCCAAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp CAGTGGTGTCGGGAACACCGTGGTCTGGCCAGGAGGTaGAATGGAACTGTCTCAGAGGGTGACTCTCACTTG +
Preference number: 6 (lower is better)
Translates to: QWCREHRGLARR*NGTVSEGDSHL
Trigger: CAAGTGAGAGTCACCCTCTGAGACAGTTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCCGACACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp CTCTATGGCCTGGGGCTGTCCTTCTGTGCCATTCGCTaGTTGGGAATAAACGGTGGCATTGTATCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: LYGLGLSFCAIR*LGINGGIVSGA
Trigger: GGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCCAGGCCATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp TGTGATGCCAGTAGTGCAGGTGTTCCGGGTGGGGGCTaGCATCTTTCCACAGGACACAGTGGTGATGCTGAT +
Preference number: 6 (lower is better)
Translates to: CDASSAGVPGGG*HLSTGHSGDAD
Trigger: ATCAGCATCACCACTGTGTCCTGTGGAAAGATGGCAGCCCCCACCCGGAACACCTGCACTACTGGCATCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp TATGGCCTGGGGCTGTCCTTCTGTGCCATTCGCTGCTaGGGAATAAACGGTGGCATTGTATCGGGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: YGLGLSFCAIRC*GINGGIVSGAR
Trigger: CCTGGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCCAGGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp CATGGCTGCTCCATGCTAAGCCGATCTCCGTCGTGCTaGCCACTGTCACTCGGAAGTCAGAAACTGGAACAG +
Preference number: 6 (lower is better)
Translates to: HGCSMLSRSPSC*PLSLGSQKLEQ
Trigger: CTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCGGCTTAGCATGGAGCAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp CATCTCTACTGCGATAGCCAGATGCTGTCAGCAGCTTaGCACACAGCAGTGAACAAGGCCAACGCCAACCGT +
Preference number: 6 (lower is better)
Translates to: HLYCDSQMLSAA*HTAVNKANANR
Trigger: ACGGTTGGCGTTGGCCTTGTTCACTGCTGTGTGCCAAGCTGCTGACAGCATCTGGCTATCGCAGTAGAGATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526550.1
CDS CCA 72 bp GTCCTTCTGTGCCATTCGCTGCTTGGGAATAAACGGTaGCATTGTATCGGGTGCCAGGCTCTAACCCGACAA +
Preference number: 6 (lower is better)
Translates to: VLLCHSLLGNKR*HCIGCQALTRQ
Trigger: TTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp AAGGTGCCCGGAATCAGGCCCTGGAGAGTAATCGCTTaGTCATACGTGCTTGTGTGGTTAGAGCCATGCTTG +
Preference number: 6 (lower is better)
Translates to: KVPGIRPWRVIA*SYVLVWLEPCL
Trigger: CAAGCATGGCTCTAACCACACAAGCACGTATGACAAAGCGATTACTCTCCAGGGCCTGATTCCGGGCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp CACATAGCTCTCAGCCCCATCAATGAGCCCCTTGTTTaGAGGGTGGAAGGTAATGTTGGTGAAGCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: HIALSPINEPLV*RVEGNVGEASH
Trigger: GTGGCTGGCTTCACCAACATTACCTTCCACCCTCAAAACAAGGGGCTCATTGATGGGGCTGAGAGCTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp CCCTGGCTTCAGGCCCGAGATATTGACCTGAAGTCTTaGGTCTTGAGTCAACTCCTCATGGCTTCCAATGCT +
Preference number: 6 (lower is better)
Translates to: PWLQARDIDLKS*VLSQLLMASNA
Trigger: AGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGAAGCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp CTGTACAGAATGACTTCCGGCCAGGTTCCAGTGACTTaGTCCCATCCCCTACTTGTGCAAAGATCTCCACTG +
Preference number: 6 (lower is better)
Translates to: LYRMTSGQVPVT*SHPLLVQRSPL
Trigger: CAGTGGAGATCTTTGCACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGGAAGTCATTCTGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp GACGCAGGATCTGTACAGAATGACTTCCGGCCAGGTTCCAGTGACTaGATCCCATCCCCTACTTGTGCAAAGATCTCCACTGTGTATGAT +
Preference number: 6 (lower is better)
Translates to: DAGSVQNDFRPGSSD*IPSPTCAKISTVYD
Trigger: ATCATACACAGTGGAGATCTTTGCACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGGAAGTCATTCTGTACAGATCCTGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp AAGTTGCTGCTGTGGTGTTGGTACTTACATCAATGTTaGACACATTGCTGGGCCGTGTGTACTGTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: KLLLWCWYLHQC*THCWAVCTVQW
Trigger: CCACTGCACAGTACACACGGCCCAGCAATGTGTCCAACATTGATGTAAGTACCAACACCACAGCAGCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp TTGCCACAGTTATGTCTCCATAGTCCTGAGCCTGCTTaGAGGGCCAATACTCCTCACATTTGGTTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: LPQLCLHSPEPA*RANTPHIWFFP
Trigger: AGGGAAGAACCAAATGTGAGGAGTATTGGCCCTCCAAGCAGGCTCAGGACTATGGAGACATAACTGTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp TCTGTACAGAATGACTTCCGGCCAGGTTCCAGTGACTaGATCCCATCCCCTACTTGTGCAAAGATCTCCACT +
Preference number: 6 (lower is better)
Translates to: SVQNDFRPGSSD*IPSPTCAKIST
Trigger: AGTGGAGATCTTTGCACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGGAAGTCATTCTGTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp CGCTGTGGGTGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTaGGAATTAGGCGATGTAACCATTGGTCTTTCCAAATGTGGTCAC +
Preference number: 6 (lower is better)
Translates to: RCGCDGLVHSRKVIP*ELGDVTIGLSKCGH
Trigger: GTGACCACATTTGGAAAGACCAATGGTTACATCGCCTAATTCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp CTCCCCCGCCACATGTATCTTGTAGGTATAGTTAGATaGCGACTCGTTATCGCTGACTTTCCAGATCAGGGT +
Preference number: 6 (lower is better)
Translates to: LPRHMYLVGIVR*RLVIADFPDQG
Trigger: ACCCTGATCTGGAAAGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp CGAGAATTGCCAGCTCCCTCCTGTGTGATATGCATCTaGAATGATTCTGCATCATGGCTGCTCCATGCTAAG +
Preference number: 6 (lower is better)
Translates to: RELPAPSCVICI*NDSASWLLHAK
Trigger: CTTAGCATGGAGCAGCCATGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp ATGGTGATGTTATATAAGGTGCCCGGAATCAGGCCCTaGAGAGTAATCGCTTTGTCATACGTGCTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: MVMLYKVPGIRP*RVIALSYVLVW
Trigger: CCACACAAGCACGTATGACAAAGCGATTACTCTCCAGGGCCTGATTCCGGGCACCTTATATAACATCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp ATGTTATATAAGGTGCCCGGAATCAGGCCCTGGAGAGTAATCGCTTaGTCATACGTGCTTGTGTGGTTAGAGCCATGCTTGGACTCTATG +
Preference number: 6 (lower is better)
Translates to: MLYKVPGIRPWRVIA*SYVLVWLEPCLDSM
Trigger: CATAGAGTCCAAGCATGGCTCTAACCACACAAGCACGTATGACAAAGCGATTACTCTCCAGGGCCTGATTCCGGGCACCTTATATAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp GAGGCGTCATCAAAGTTCTGCCAACTTAAAGTTGCTGCTGTGGTGTaGGTACTTACATCAATGTTGGACACATTGCTGGGCCGTGTGTAC +
Preference number: 6 (lower is better)
Translates to: EASSKFCQLKVAAVV*VLTSMLDTLLGRVY
Trigger: GTACACACGGCCCAGCAATGTGTCCAACATTGATGTAAGTACCAACACCACAGCAGCAACTTTAAGTTGGCAGAACTTTGATGACGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp CAATACTTGGTTCCAGGGAACAAGCCACCAATGATAATACTTTGGTaGGTGGTTATTTCTACCCGAGAATTGCCAGCTCCCTCCTGTGTG +
Preference number: 6 (lower is better)
Translates to: QYLVPGNKPPMIILW*VVISTRELPAPSCV
Trigger: CACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAAGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp AGGAGTACGTGGGAGAGGCGTCATCAAAGTTCTGCCAACTTAAAGTaGCTGCTGTGGTGTTGGTACTTACATCAATGTTGGACACATTGC +
Preference number: 6 (lower is better)
Translates to: RSTWERRHQSSANLK*LLWCWYLHQCWTHC
Trigger: GCAATGTGTCCAACATTGATGTAAGTACCAACACCACAGCAGCAACTTTAAGTTGGCAGAACTTTGATGACGCCTCTCCCACGTACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp GTGGGGGCTGCCATCTTTCCACAGGACACAGTGGTGATGCTGATGTaGTACGAGGTAGAAAAATTCAAATACGTGACTTCCGTTCTATAC +
Preference number: 6 (lower is better)
Translates to: VGAAIFPQDTVVMLM*YEVEKFKYVTSVLY
Trigger: GTATAGAACGGAAGTCACGTATTTGAATTTTTCTACCTCGTACAACATCAGCATCACCACTGTGTCCTGTGGAAAGATGGCAGCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp TGCACTGGGAACAGTTCTATTGCAAACTGTCCGAGATaGCCCTTCAGTCCCATTTGGTCCTTTTGGAACTAT +
Preference number: 6 (lower is better)
Translates to: CTGNSSIANCPR*PFSPIWSFWNY
Trigger: ATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGTTCCCAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp CCCTGGAGAGTAATCGCTTTGTCATACGTGCTTGTGTaGTTAGAGCCATGCTTGGACTCTATGACTAAATGG +
Preference number: 6 (lower is better)
Translates to: PWRVIALSYVLV*LEPCLDSMTKW
Trigger: CCATTTAGTCATAGAGTCCAAGCATGGCTCTAACCACACAAGCACGTATGACAAAGCGATTACTCTCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp GTTCCAGGGAACAAGCCACCAATGATAATACTTTGGTaGGTGGTTATTTCTACCCGAGAATTGCCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: VPGNKPPMIILW*VVISTRELPAP
Trigger: GGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp AAAGCAATACTTGGTTCCAGGGAACAAGCCACCAATGATAATACTTaGGTTGGTGGTTATTTCTACCCGAGAATTGCCAGCTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: KAILGSREQATNDNT*VGGYFYPRIASSLL
Trigger: CAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAAGTATTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp TTATTTCTACCCGAGAATTGCCAGCTCCCTCCTGTGTaGTATGCATCTGAAATGATTCTGCATCATGGCTGC +
Preference number: 6 (lower is better)
Translates to: LFLPENCQLPPV*YASEMILHHGC
Trigger: GCAGCCATGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp ACATACTGGTCCTCTGTCTGCACCATTAAAGGCCTATaGATTCGAAGGTCATACACAATCCCATACACATCC +
Preference number: 6 (lower is better)
Translates to: TYWSSVCTIKGL*IRRSYTIPYTS
Trigger: GGATGTGTATGGGATTGTGTATGACCTTCGAATGCATAGGCCTTTAATGGTGCAGACAGAGGACCAGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp CTTGGTTCCAGGGAACAAGCCACCAATGATAATACTTaGGTTGGTGGTTATTTCTACCCGAGAATTGCCAGC +
Preference number: 6 (lower is better)
Translates to: LGSREQATNDNT*VGGYFYPRIAS
Trigger: GCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp TTCCATTCTGTTTATGAAAGGATTCTGCTGTACTGCTaGTCTGCGTTATGCCATTTTCCCCTGTGGCAACAG +
Preference number: 6 (lower is better)
Translates to: FHSVYERILLYC*SALCHFPLWQQ
Trigger: CTGTTGCCACAGGGGAAAATGGCATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000526550.1
ENST00000527952.1
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp GTCGCTGGACGTAAGCCTGTGATGTTACACCATGGTTaGTGCACAACAGTAATTGTCTTCTCATTTTCCATC +
Preference number: 6 (lower is better)
Translates to: VAGRKPVMLHHG*CTTVIVFSFSI
Trigger: GATGGAAAATGAGAAGACAATTACTGTTGTGCATCAACCATGGTGTAACATCACAGGCTTACGTCCAGCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000534219.5
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp AGGTGTTCCAGTTCCATTCTGTTTATGAAAGGATTCTaGTGTACTGCTGATCTGCGTTATGCCATTTTCCCC +
Preference number: 6 (lower is better)
Translates to: RCSSSILFMKGF*CTADLRYAIFP
Trigger: GGGGAAAATGGCATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000526550.1
ENST00000527952.1
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp TTGGTTCCAGGGAACAAGCCACCAATGATAATACTTTaGTTGGTGGTTATTTCTACCCGAGAATTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: LVPGNKPPMIIL*LVVISTRELPA
Trigger: AGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CCA 72 bp GGAATTAGGCGATGTAACCATTGGTCTTTCCAAATGTaGTCACGGGCGCAAGGTTTTCATAGATTGTCATTG +
Preference number: 6 (lower is better)
Translates to: GIRRCNHWSFQM*SRAQGFHRLSL
Trigger: CAATGACAATCTATGAAAACCTTGCGCCCGTGACCACATTTGGAAAGACCAATGGTTACATCGCCTAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp TCAAAGTTCTGCCAACTTAAAGTTGCTGCTGTGGTGTaGGTACTTACATCAATGTTGGACACATTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SKFCQLKVAAVV*VLTSMLDTLLG
Trigger: GCCCAGCAATGTGTCCAACATTGATGTAAGTACCAACACCACAGCAGCAACTTTAAGTTGGCAGAACTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp TGCGACGGTCTGGTTCACTCCAGAAAGGTTATTCCTTaGGAATTAGGCGATGTAACCATTGGTCTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: CDGLVHSRKVIP*ELGDVTIGLSK
Trigger: TTTGGAAAGACCAATGGTTACATCGCCTAATTCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp GAAATCTCTGATGGTCCATTCCGGAAGAACAATTTCTaGTGTCATTGCCACAGTTATGTCTCCATAGTCCTG +
Preference number: 6 (lower is better)
Translates to: EISDGPFRKNNF*CHCHSYVSIVL
Trigger: CAGGACTATGGAGACATAACTGTGGCAATGACATCAGAAATTGTTCTTCCGGAATGGACCATCAGAGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS GCA 72 bp TTCAAATCATCCAGTTCTATTGCAAACTGTCCGAGATaGCCCTTCAGTCCCATTTGGTCCTTTTGGAACTAT +
Preference number: 6 (lower is better)
Translates to: FKSSSSIANCPR*PFSPIWSFWNY
Trigger: ATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGGATGATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440289.6
CDS TCA 72 bp CCTCTATTCTCAGCCAGTTCTGCTGCATATTTAGGTTaGCTAATTCCAACAAGCTTCAGATCTTCGTATTCC +
Preference number: 6 (lower is better)
Translates to: PLFSASSAAYLG*LIPTSFRSSYS
Trigger: GGAATACGAAGATCTGAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAGAATAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS CAA 72 bp ATGACTTTTATGACTCTGGGATCTCCCCAAGTCTCATaGCCTATTCCTGGAGTGATGGAGAATACATATGAA +
Preference number: 6 (lower is better)
Translates to: MTFMTLGSPQVS*PIPGVMENTYE
Trigger: TTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGGAGATCCCAGAGTCATAAAAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000613246.4
ENST00000615445.4
CDS CAA 90 bp TACTCAGAAGCAGCTGTGTCATTACTTTTCCAAGTTAAGATCACATaGGTTGGACTGATGGAAACAGCTTTAATGTCAAACACAGGACTG +
Preference number: 6 (lower is better)
Translates to: YSEAAVSLLFQVKIT*VGLMETALMSNTGL
Trigger: CAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGATCTTAACTTGGAAAAGTAATGACACAGCTGCTTCTGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418331.7
ENST00000440289.6
ENST00000526550.1
ENST00000534219.5
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp TTCTTCTGTTCTTATGAGGTATGTCACATAAGTATCTaGGGCTCCCTTTTTGAAATCCTCATACGTGTATTT +
Preference number: 6 (lower is better)
Translates to: FFCSYEVCHISI*GSLFEILIRVF
Trigger: AAATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGATACTTATGTGACATACCTCATAAGAACAGAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4
CDS TCA 72 bp ACGTCAATTTCATATTTCAAAACTTCAGACAAGCTCTaGGAACGTCCCTTTTCTTCTGTTCTTATGAGGTAT +
Preference number: 6 (lower is better)
Translates to: TSISYFKTSDKL*ERPFSSVLMRY
Trigger: ATACCTCATAAGAACAGAAGAAAAGGGACGTTCTCAGAGCTTGTCTGAAGTTTTGAAATATGAAATTGACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418331.7
ENST00000613246.4
ENST00000615445.4