RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRH (Homo sapiens)

Ensembl gene IDs: ENSG00000080031

Ensembl transcript IDs: ENST00000263434.5, ENST00000376350.8, ENST00000588559.5

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGGGAACCAGGAATCCAGATCCCCAGCTCCCATAGGACTCATCTaGAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTTGGG +
Preference number: 1 (lower is better)
Translates to: SGNQESRSPAPIGLI*SPPDHSLLGKPEFG
Trigger: CCCAAACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATGGGAGCTGGGGATCTGGATTCCTGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR GCA 90 bp AAATTCCTTCCTGCCTCAGAATCCAGGCCCCAGCCTGTTTCTTTCTaGATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCC +
Preference number: 1 (lower is better)
Translates to: KFLPASESRPQPVSF*ILERPRESKLSSLS
Trigger: GGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGAAAGAAACAGGCTGGGGCCTGGATTCTGAGGCAGGAAGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR CCA 90 bp GATTTGGTTTCTGAAGTAAAATCAAGGCAGGATCCTTCCTGCCTTTaGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCCTTCCTGCC +
Preference number: 1 (lower is better)
Translates to: DLVSEVKSRQDPSCL*SSSSQNSRPKFLPA
Trigger: GGCAGGAAGGAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTGATTTTACTTCAGAAACCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR GCA 90 bp AAGACTGATTTGGTTTCTGAAGTAAAATCAAGGCAGGATCCTTCCTaGCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCCTT +
Preference number: 1 (lower is better)
Translates to: KTDLVSEVKSRQDPS*LWSSSSQNSRPKFL
Trigger: AAGGAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTGATTTTACTTCAGAAACCAAATCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCGAGCTTGAGGATGCCTaGGCTGCCGACCCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSELEDA*AADPAP
Trigger: GGGGGCTGGGTCGGCAGCCCAGGCATCCTCAAGCTC...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR GCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAGGGAGCCCAGCCCTCTaGTCTTCCAGGAATCTGGGC +
Preference number: 2 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAGSPAL*SSRNLG
Trigger: GCCCAGATTCCTGGAAGAGCAGAGGGCTGGGCTCCC...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTGAGCTTGAGGATGCCTaGGCTGCCGACCCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIELEDA*AADPAP
Trigger: GGGGGCTGGGTCGGCAGCCCAGGCATCCTCAAGCTC...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCCAGCACCCAGGAGTCTaGGAGCCCAGCCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSQHPGV*EPSPLL
Trigger: GAGCAGAGGGCTGGGCTCCCAGACTCCTGGGTGCTG...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR TCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCTGGGTGTCCAGAGCTTaGGGATGCCTGGGCTGCCGA +
Preference number: 2 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLWVSRA*GCLGCR
Trigger: TCGGCAGCCCAGGCATCCTCAAGCTCTGGACACCCA...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR GCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTGGGAGCCCAGCCCTCTaGTCTTCCAGGAATCTGGGC +
Preference number: 2 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAGSPAL*SSRNLG
Trigger: GCCCAGATTCCTGGAAGAGCAGAGGGCTGGGCTCCC...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTGGGGAAACCAGAGTTTaGGATACCAGCCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAGETRV*DTSPLL
Trigger: GAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCC...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR TCA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCATGGGTGTCCAGAGCTTaGGGATGCCTGGGCTGCCGA +
Preference number: 2 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSWVSRA*GCLGCR
Trigger: TCGGCAGCCCAGGCATCCTCAAGCTCTGGACACCCA...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR TCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCATAGGACTCATCTaGAGCCCACCAGACCACTCT +
Preference number: 2 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAPIGLI*SPPDHS
Trigger: AGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATGGG...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCCAGACCACTCTCTCCTaGGGAAACCAGAGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPQTTLS*GNQSLG
Trigger: TCCCAAACTCTGGTTTCCCCAGGAGAGAGTGGTCTG...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR TCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTCCCATAGGACTCATCTaGAGCCCACCAGACCACTCT +
Preference number: 2 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIPIGLI*SPPDHS
Trigger: AGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATGGG...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTGCTCTTCCAGGAATCTaGGCTCAAGTGGGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVALPGI*AQVGVQ
Trigger: CTGGACACCCACTTGAGCCCAGATTCCTGGAAGAGC...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGGCTCTTCCAGGAATCTaGGCTCAAGTGGGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGALPGI*AQVGVQ
Trigger: CTGGACACCCACTTGAGCCCAGATTCCTGGAAGAGC...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR GCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTAGGCAGGATCCTTCCTaGCTTTGGTCCTCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIRQDPS*LWSSSS
Trigger: GCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCT...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAGGGGAAACCAGAGTTTaGGATACCAGCCCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEGETRV*DTSPLL
Trigger: GAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCC...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR GCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTCAGCCTGTTTCTTTCTaGATCCTGGAAAGACCTAGG +
Preference number: 2 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIQPVSF*ILERPR
Trigger: CCTAGGTCTTTCCAGGATGCAGAAAGAAACAGGCTG...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCATTTCTTTCTGCATCCTaGAAAGACCTAGGGAATCCA +
Preference number: 2 (lower is better)
Translates to: QGRILPAFGPQVARTPDPFLSAS*KDLGNP
Trigger: TGGATTCCCTAGGTCTTTCCAGGATGCAGAAAGAAA...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR TCA 72 bp TTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTaGGGATGCCTGGGCTGCCGACCCAGCCCCCTCGTC +
Preference number: 3 (lower is better)
Translates to: FQESGLKWVSRA*GCLGCRPSPLV
Trigger: GACGAGGGGGCTGGGTCGGCAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR CCA 72 bp AGTCTGGGAGCCCAGCCCTCTGCTCTTCCAGGAATCTaGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCT +
Preference number: 3 (lower is better)
Translates to: SLGAQPSALPGI*AQVGVQSLRMP
Trigger: AGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAGAGCAGAGGGCTGGGCTCCCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CAA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCATGGGGAAACCAGAGTTaGGGATACCAGCCCCCTCCT +
Preference number: 3 (lower is better)
Translates to: QGRILPAFGPQVARTPDPWGNQS*GYQPPP
Trigger: AGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCA...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR TCA 72 bp CAGGAATCCAGATCCCCAGCTCCCATAGGACTCATCTaGAGCCCACCAGACCACTCTCTCCTGGGGAAACCA +
Preference number: 3 (lower is better)
Translates to: QESRSPAPIGLI*SPPDHSLLGKP
Trigger: TGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATGGGAGCTGGGGATCTGGATTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR-3UTR CAA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGTGGGGAAACCAGAGTTaGGGATACCAGCCCCCTCCT +
Preference number: 3 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGWGNQS*GYQPPP
Trigger: AGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCA...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR GCA 72 bp CCTGCCTCAGAATCCAGGCCCCAGCCTGTTTCTTTCTaGATCCTGGAAAGACCTAGGGAATCCAAGCTATCA +
Preference number: 3 (lower is better)
Translates to: PASESRPQPVSF*ILERPRESKLS
Trigger: TGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGAAAGAAACAGGCTGGGGCCTGGATTCTGAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR CCA 72 bp CAGAATCCAGGCCCCAGCCTGTTTCTTTCTGCATCCTaGAAAGACCTAGGGAATCCAAGCTATCATCCCTCT +
Preference number: 3 (lower is better)
Translates to: QNPGPSLFLSAS*KDLGNPSYHPS
Trigger: AGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGAAAGAAACAGGCTGGGGCCTGGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
3UTR GCA 72 bp TTGGTTTCTGAAGTAAAATCAAGGCAGGATCCTTCCTaGCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCC +
Preference number: 3 (lower is better)
Translates to: LVSEVKSRQDPS*LWSSSSQNSRP
Trigger: GGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTGATTTTACTTCAGAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCGGTTCCTCCCTGGGTTaGGGGCAGGCGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPGSSLG*GQAPWP
Trigger: GGGCCAGGGCGCCTGCCCCCAACCCAGGGAGGAACC...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCGGTTCCTCCCTGGGTTaGGGGCAGGCGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSGSSLG*GQAPWP
Trigger: GGGCCAGGGCGCCTGCCCCCAACCCAGGGAGGAACC...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCGAGCTTGAGGATGCCTaGGCTGCCGACCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPELEDA*AADPAP
Trigger: GGGGGCTGGGTCGGCAGCCCAGGCATCCTCAAGCTC...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCTGTCAGGTTCCTCCCTaGGTTGGGGGCAGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPCQVPP*VGGRRP
Trigger: AGGGCGCCTGCCCCCAACCCAGGGAGGAACCTGACA...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCCAGCACCCAGGAGTCTaGGAGCCCAGCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPQHPGV*EPSPLL
Trigger: GAGCAGAGGGCTGGGCTCCCAGACTCCTGGGTGCTG...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCACGCCAGCACTGCAGTaGACAATGGGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPTPALQ*TMGGPP
Trigger: GGGAGGCCCACCCATTGTGCACTGCAGTGCTGGCGT...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGGTCGTGATGGTGGCTaGGTAGGACCGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLGRDGG*VGPSRP
Trigger: GGGCCGGCTCGGTCCTACCCAGCCACCATCACGACC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCCAAAGGCTCCGGCAATaGCCCCTGCACTCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPQRLRQ*PLHSRC
Trigger: ACACCGAGAGTGCAGGGGTCATTGCCGGAGCCTTTG...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCGACCCTGGGTTGCAATaGACTCCTGGGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPDPGLQ*TPGGSR
Trigger: TCTGGAGCCCCCAGGAGTTCATTGCAACCCAGGGTC...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAAGGGTTACCCGCAGGTaGCCATGGGTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTARVTRR*PWVQGC
Trigger: GCAGCCCTGCACCCATGGGCACCTGCGGGTAACCCT...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCATGGGGGCAGGCGCCCTaGCCCCTGTCCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPWGQAP*PLSSCT
Trigger: TGTGCAGCTGGACAGGGGCCAGGGCGCCTGCCCCCA...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCTGGGGGCAGGCGCCCTaGCCCCTGTCCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSWGQAP*PLSSCT
Trigger: TGTGCAGCTGGACAGGGGCCAGGGCGCCTGCCCCCA...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCACCCGCAGGTGCCCATaGGTGCAGGGCTGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPTRRCP*VQGCES
Trigger: GGACTCGCAGCCCTGCACCCATGGGCACCTGCGGGT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCGACGCACAGAGGCTCTaGGTGGAACTGGCTACGTCA +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPDAQRL*VELATS
Trigger: TGACGTAGCCAGTTCCACGCAGAGCCTCTGTGCGTC...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGGAGACCCTCGGACTaGAGCTGCCGGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPRRPSD*SCRSRT
Trigger: CGTCCTGCTCCGGCAGCTGCAGTCCGAGGGTCTCCT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCACCCGCAGGTGCCCATaGGTGCAGGGCTGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLTRRCP*VQGCES
Trigger: GGACTCGCAGCCCTGCACCCATGGGCACCTGCGGGT...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCTTCTGCTCCTCCACCTaGAGGAGCAGCAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSFCSST*RSSSSR
Trigger: GCGGGAACTGCTGCTCCTCCAGGTGGAGGAGCAGAA...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAAGCCAGCAAGGTGTCTaGGGAGGAGGGAACGCCGTG +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTASQQGV*GGGNAV
Trigger: CACGGCGTTCCCTCCTCCCCAGACACCTTGCTGGCT...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCTTCTCGGCTGGGGCCTaGGCTGACTGTTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSFSAGA*ADCWRN
Trigger: GTTCCTCCAACAGTCAGCCCAGGCCCCAGCCGAGAA...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGGTGCAGAGAGACCTTaGGCACAGGGACTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLGAERP*AQGLPP
Trigger: CGGAGGGAGTCCCTGTGCCCAAGGTCTCTCTGCACC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCGGTGATGTCAGTACCTaGGGTGCTTTGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSGDVST*GALGPG
Trigger: CCCAGGACCCAAAGCACCTCAGGTACTGACATCACC...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCGCCGAAGCCACCATCTaGGACTGGCTGTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSAEATI*DWLWPT
Trigger: GGTGGGCCACAGCCAGTCTCAGATGGTGGCTTCGGC...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCACCAGGGTGTGGCTCTaGTGTTCCCACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPTRVWL*CSHTRR
Trigger: GCGCCTGGTGTGGGAACAGCAGAGCCACACCCTGGT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCACAGACAGTGTCTTCTaGTCCTCCACCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPTDSVF*SSTWRS
Trigger: GCTCCTCCAGGTGGAGGAGCAGAAGACACTGTCTGT...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTCCCTCGGACTGCAGCTaGCGGAGCAGGACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVPSDCS*RSRTSR
Trigger: CCTGGACGTCCTGCTCCGGCAGCTGCAGTCCGAGGG...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGCCCTCGGACTGCAGCTaGCGGAGCAGGACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGPSDCS*RSRTSR
Trigger: CCTGGACGTCCTGCTCCGGCAGCTGCAGTCCGAGGG...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGCTGGGTTGGGGGCTGTaGTGGCATTTCGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLLGWGL*WHFESP
Trigger: GGGAGACTCGAAATGCCACCACAGCCCCCAACCCAG...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAGGTGCTTTGGGTCCTaGGGTCAGTCATGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSRCFGS*GQSCLP
Trigger: GGGAAGGCATGACTGACCCCAGGACCCAAAGCACCT...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCGGGGATGTCCCTTGCTaGCCCACTGGACCCAGTATA +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSGDVPC*PTGPSI
Trigger: TATACTGGGTCCAGTGGGCCAGCAAGGGACATCCCC...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTGGTCGTGATGGTGGCTaGGTAGGACCGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIGRDGG*VGPSRP
Trigger: GGGCCGGCTCGGTCCTACCCAGCCACCATCACGACC...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGCCAGCAAGGTGTCTaGGGAGGAGGGAACGCCGTG +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPSQQGV*GGGNAV
Trigger: CACGGCGTTCCCTCCTCCCCAGACACCTTGCTGGCT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGCAGTGCACAATGGGTaGGCCTCCCTCCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLAVHNG*ASLHGL
Trigger: CAGACCATGGAGGGAGGCCCACCCATTGTGCACTGC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGCACTGCAGTGCACAATaGGTGGGCCTCCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLHCSAQ*VGLPPW
Trigger: CCATGGAGGGAGGCCCACCCATTGTGCACTGCAGTG...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCCTGGGTTGTGAGCTGTaGTGGCATTTCGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPLGCEL*WHFESP
Trigger: GGGAGACTCGAAATGCCACCACAGCTCACAACCCAG...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376350.8
CDS-3UTR TCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCTGCTGTTATAGCCTCTaGCCTCATTCCTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSCCYSL*PHSSRP
Trigger: GGGCCGAGAGGAATGAGGTCAGAGGCTATAACAGCA...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAGAGCAGTGGCTGCAGTaGGGGTGCTGTTATAGCCTC +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAEQWLQ*GCCYSL
Trigger: GAGGCTATAACAGCACCCTCACTGCAGCCACTGCTC...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCGTCCCAGATGGTCGTaGTGGTGGCTGGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLRPRWS*WWLGRT
Trigger: GGTCCTACCCAGCCACCATCACGACCATCTGGGACG...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCACGTCCCAGATGGTCGTaGTGGTGGCTGGGTAGGACC +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPRPRWS*WWLGRT
Trigger: GGTCCTACCCAGCCACCATCACGACCATCTGGGACG...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCTGGCAGACCACAGAGTaGGACACGACCTTCATTCCG +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSWQTTE*DTTFIP
Trigger: CGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCA...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCATGCAGTTGGTCAGCATaGCCAGGGTGTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTACSWSA*PGCGSA
Trigger: AGCAGAGCCACACCCTGGTCATGCTGACCAACTGCA...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAGGACGTCCAGGGCAATaGGGGTTCCTGTGCGACCCA +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPGRPGQ*GFLCDP
Trigger: TGGGTCGCACAGGAACCCTCATTGCCCTGGACGTCC...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCGGACGTCCAGGGCAATaGGGGTTCCTGTGCGACCCA +
Preference number: 4 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSGRPGQ*GFLCDP
Trigger: TGGGTCGCACAGGAACCCTCATTGCCCTGGACGTCC...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTTGGGTGTCCAGAGCTTaGGGATGCCTGGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAWVSRA*GCLGCR
Trigger: TCGGCAGCCCAGGCATCCTCAAGCTCTGGACACCCA...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTTCCGGGGATGTCCCTTaGTGGCCCACTGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPASGDVP*WPTGPS
Trigger: ACTGGGTCCAGTGGGCCAGCAAGGGACATCCCCGGA...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCTCCGGGGATGTCCCTTaGTGGCCCACTGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSSGDVP*WPTGPS
Trigger: ACTGGGTCCAGTGGGCCAGCAAGGGACATCCCCGGA...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAGACGCACAGAGGCTCTaGGTGGAACTGGCTACGTCA +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTADAQRL*VELATS
Trigger: TGACGTAGCCAGTTCCACGCAGAGCCTCTGTGCGTC...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCACCAGGGTGTGGCTCTaGTGTTCCCACACCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSTRVWL*CSHTRR
Trigger: GCGCCTGGTGTGGGAACAGCAGAGCCACACCCTGGT...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAGGGTTACCCGCAGGTaGCCATGGGTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGRVTRR*PWVQGC
Trigger: GCAGCCCTGCACCCATGGGCACCTGCGGGTAACCCT...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTACGCCAGCACTGCAGTaGACAATGGGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPATPALQ*TMGGPP
Trigger: GGGAGGCCCACCCATTGTGCACTGCAGTGCTGGCGT...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTAGGAGACCCTCGGACTaGAGCTGCCGGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVRRPSD*SCRSRT
Trigger: CGTCCTGCTCCGGCAGCTGCAGTCCGAGGGTCTCCT...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCAGGCAGGATCCTTCCTaGCTTTGGTCCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPRQDPS*LWSSSS
Trigger: GCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCT...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCGGTTTCTCACTGGGTTaGGGGCTGTGGTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSGFSLG*GLWWHF
Trigger: GAAATGCCACCACAGCCCCCAACCCAGTGAGAAACC...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCGCCCAGACGGTGAGGTaGTACAGGCTGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLAQTVR*YRLPAS
Trigger: GGAAGCTGGCAGCCTGTACCACCTCACCGTCTGGGC...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGTTGACCCAATTCGCTTaGGGATCTTGCCCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLLTQFA*GSCPLR
Trigger: CCGGAGGGGGCAAGATCCCCAAGCGAATTGGGTCAA...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACTGTGTCTGGGTATGTaGACGCACAGAGGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTALCLGM*THRGSA
Trigger: CGCAGAGCCTCTGTGCGTCCACATACCCAGACACAG...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAGAGCCTGGCTCCTCATaGATGGGCTTCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPEPGSS*MGFRGT
Trigger: GGTGCCCCTGAAGCCCATCCATGAGGAGCCAGGCTC...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCGTCACCCACTGTCTGTaGCAGGGGACCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLVTHCL*QGTLGC
Trigger: GCAACCCAGGGTCCCCTGCCACAGACAGTGGGTGAC...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAGTCACCCACTGTCTGTaGCAGGGGACCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPVTHCL*QGTLGC
Trigger: GCAACCCAGGGTCCCCTGCCACAGACAGTGGGTGAC...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCTTCTCGGCTGGGGCCTaGGCTGACTGTTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPFSAGA*ADCWRN
Trigger: GTTCCTCCAACAGTCAGCCCAGGCCCCAGCCGAGAA...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGGGGAAACCAGAGTTTaGGATACCAGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLGETRV*DTSPLL
Trigger: GAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCTCCAGTCCTGCTTGCTaGGGCTTGTCACTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPSSPAC*GLSLRW
Trigger: CCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGA...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCACAGCCTCCCCACATaGAGATCTGTCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSHSLPT*RSVLGA
Trigger: GGCTCCCAGGACAGATCTTCATGTGGGGAGGCTGTG...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCACAGCCTCCCCACATaGAGATCTGTCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAHSLPT*RSVLGA
Trigger: GGCTCCCAGGACAGATCTTCATGTGGGGAGGCTGTG...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCACAAAGGCTCCGGCAATaGCCCCTGCACTCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPQRLRQ*PLHSRC
Trigger: ACACCGAGAGTGCAGGGGTCATTGCCGGAGCCTTTG...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCGCAGGCCCACGAGGATaGGAAACAGGAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSAGPRG*ETGGCP
Trigger: TGGGCATCCTCCTGTTTCTCATCCTCGTGGGCCTGC...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAGCAGGCCCACGAGGATaGGAAACAGGAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPAGPRG*ETGGCP
Trigger: TGGGCATCCTCCTGTTTCTCATCCTCGTGGGCCTGC...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCCCCTCTCATTCTTCCTaGCGTGGTCAGCGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSPSHSS*RGQRSL
Trigger: AAGACTTCGCTGACCACGTCAGGAAGAATGAGAGGG...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCGACCCTGGGTTGCAATaGACTCCTGGGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSDPGLQ*TPGGSR
Trigger: TCTGGAGCCCCCAGGAGTTCATTGCAACCCAGGGTC...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCTGCAGTTGGTCAGCATaGCCAGGGTGTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPCSWSA*PGCGSA
Trigger: AGCAGAGCCACACCCTGGTCATGCTGACCAACTGCA...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGTGGGTGTCCAGAGCTTaGGGATGCCTGGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGWVSRA*GCLGCR
Trigger: TCGGCAGCCCAGGCATCCTCAAGCTCTGGACACCCA...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAGAGATGCTGACATTCTaGCTGGAGCCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAEMLTF*LEPRAP
Trigger: TGGAGCACGTGGCTCCAGGCAGAATGTCAGCATCTC...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGCTGAGGCTTGTCACTaGGTTGGGGACTGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLAEACH*VGDCGD
Trigger: ATCTCCACAGTCCCCAACGCAGTGACAAGCCTCAGC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTGGGAGCCCAGCCCTCTaGTCTTCCAGGAATCTGGGC +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIGSPAL*SSRNLG
Trigger: GCCCAGATTCCTGGAAGAGCAGAGGGCTGGGCTCCC...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCCTGGGTTGGGGGCTGTaGTGGCATTTCGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSLGWGL*WHFESP
Trigger: GGGAGACTCGAAATGCCACCACAGCCCCCAACCCAG...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTGCCCAGACGGTGAGGTaGTACAGGCTGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIAQTVR*YRLPAS
Trigger: GGAAGCTGGCAGCCTGTACCACCTCACCGTCTGGGC...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCTTGCTGGCCCACTaGACCCAGTATACGTACAAC +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAPLLAH*TQYTYN
Trigger: GTTGTACGTATACTGGGTCCAGTGGGCCAGCAAGGG...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGGCTCTGCGTGGAACTaGCTACGTCATTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLGSAWN*LRHSSL
Trigger: CAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGCGAAGTCTTCAGCTaGGATGTCCCCTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPSEVFS*DVPWGA
Trigger: AGCTCCCCAGGGGACATCCCAGCTGAAGACTTCGCT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCGCAGTGCACAATGGGTaGGCCTCCCTCCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLAVHNG*ASLHGL
Trigger: CAGACCATGGAGGGAGGCCCACCCATTGTGCACTGC...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTTCCAACTTGTGGGCCTaGATGGCGGCCACGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPASNLWA*MAATFS
Trigger: CGAGAACGTGGCCGCCATCCAGGCCCACAAGTTGGA...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAGAGCTTGAGGATGCCTaGGCTGCCGACCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEELEDA*AADPAP
Trigger: GGGGGCTGGGTCGGCAGCCCAGGCATCCTCAAGCTC...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCCAGCACCCAGGAGTCTaGGAGCCCAGCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QDPSCLWSSSSQNSRPKFQHPGV*EPSPLL
Trigger: GAGCAGAGGGCTGGGCTCCCAGACTCCTGGGTGCTG...GAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGGGTGCAGAGAGACCTTaGGCACAGGGACTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGGAERP*AQGLPP
Trigger: CGGAGGGAGTCCCTGTGCCCAAGGTCTCTCTGCACC...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCTCCAGTCCTGCTTGCTaGGGCTTGTCACTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLSSPAC*GLSLRW
Trigger: CCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGA...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCAGTCATGCCTTCCCTaGCCCATGAGACCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAQSCLP*PMRPSS
Trigger: GCTACTGGGTCTCATGGGTCAGGGAAGGCATGACTG...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTGGTGATGTCAGTACCTaGGGTGCTTTGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAGDVST*GALGPG
Trigger: CCCAGGACCCAAAGCACCTCAGGTACTGACATCACC...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCAGTTCCTTTAGGGTaGTGTCAGTACCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAPVPLG*CQYLRC
Trigger: GCACCTCAGGTACTGACATCACCCTAAAGGAACTGG...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAGAGCAGTGGCTGCAGTaGGGGTGCTGTTATAGCCTC +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPEQWLQ*GCCYSL
Trigger: GAGGCTATAACAGCACCCTCACTGCAGCCACTGCTC...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCTCCTGCTGGTCTGGTTaGCCCAATTCGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPSCWSG*PNSLGD
Trigger: ATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGA...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCGACTCCATAGCCCGCTaGGGTGCTGACACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSDSIAR*GADTGS
Trigger: ACTTCCTGTGTCAGCACCTCAGCGGGCTATGGAGTC...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCGACTCCATAGCCCGCTaGGGTGCTGACACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSDSIAR*GADTGS
Trigger: ACTTCCTGTGTCAGCACCTCAGCGGGCTATGGAGTC...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGGACCAGATCAAGTTaGCTCCATAGCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPRTRSS*LHSPLR
Trigger: CCTCAGCGGGCTATGGAGTCAACTTGATCTGGTCCT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAGCCGAAGCCACCATCTaGGACTGGCTGTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEAEATI*DWLWPT
Trigger: GGTGGGCCACAGCCAGTCTCAGATGGTGGCTTCGGC...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCATTCCTCACTGGGTTGTaGGCTGTGGTGGCATTTCGA +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAFLTGL*AVVAFR
Trigger: TCGAAATGCCACCACAGCTCACAACCCAGTGAGGAA...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376350.8
CDS-3UTR GCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATGGCCCCTGTCCAGCTaGACAGGCCCAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEWPLSS*TGPAAP
Trigger: TGGTGCTGCTGGGCCTGTGCAGCTGGACAGGGGCCA...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAACATGCCTCCAGACACTaGCGGGGACCCAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEHASRH*RGPRSP
Trigger: GGGACTCCTGGGTCCCCGGCAGTGTCTGGAGGCATG...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376350.8
CDS-3UTR CCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCATGGAGGTTTCTCACTaGGTTGGGGGCTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSMEVSH*VGGCGG
Trigger: GCCACCACAGCCCCCAACCCAGTGAGAAACCTCCAT...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAATGGAGGTTTCTCACTaGGTTGGGGGCTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPMEVSH*VGGCGG
Trigger: GCCACCACAGCCCCCAACCCAGTGAGAAACCTCCAT...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTAGGTGCTTTGGGTCCTaGGGTCAGTCATGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPARCFGS*GQSCLP
Trigger: GGGAAGGCATGACTGACCCCAGGACCCAAAGCACCT...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCGTACCTGAGGTGCTTTaGGTCCTGGGGTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPVPEVL*VLGSVM
Trigger: CATGACTGACCCCAGGACCCAAAGCACCTCAGGTAC...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCTTGACCCAATTCGCTTaGGGATCTTGCCCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSLTQFA*GSCPLR
Trigger: CCGGAGGGGGCAAGATCCCCAAGCGAATTGGGTCAA...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCAGCGAAGTCTTCAGCTaGGATGTCCCCTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSSEVFS*DVPWGA
Trigger: AGCTCCCCAGGGGACATCCCAGCTGAAGACTTCGCT...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGATGTAGTCAGAGCCTaGCTCCTCATGGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLDVVRA*LLMDGL
Trigger: AAGCCCATCCATGAGGAGCCAGGCTCTGACTACATC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTTGTGGCAGGGGACCCTaGGTTGCAATGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPACGRGP*VAMNSW
Trigger: CCAGGAGTTCATTGCAACCCAGGGTCCCCTGCCACA...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTAGCATGACCAGGGTGTaGCTCTGCTGTTCCCACACC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPASMTRV*LCCSHT
Trigger: GGTGTGGGAACAGCAGAGCCACACCCTGGTCATGCT...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGTTCTGCTCCTCCACCTaGAGGAGCAGCAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGFCSST*RSSSSR
Trigger: GCGGGAACTGCTGCTCCTCCAGGTGGAGGAGCAGAA...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTCACTGCAGTGCACAATaGGTGGGCCTCCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIHCSAQ*VGLPPW
Trigger: CCATGGAGGGAGGCCCACCCATTGTGCACTGCAGTG...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTACTTGTGGGCCTGGATaGCGGCCACGTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPATCGPG*RPRSRR
Trigger: TCTACGAGAACGTGGCCGCCATCCAGGCCCACAAGT...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCGGGGAAACCAGAGTTTaGGATACCAGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLGETRV*DTSPLL
Trigger: GAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCC...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGTATACGTACAACTaGGAGTGGGGGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSQYTYN*EWGSPG
Trigger: CCCTGGAGACCCCCACTCTCAGTTGTACGTATACTG...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCACAGTATACGTACAACTaGGAGTGGGGGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPQYTYN*EWGSPG
Trigger: CCCTGGAGACCCCCACTCTCAGTTGTACGTATACTG...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTTCTCTGCCCACACGGTaGAATTGTACAACGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPASLPTR*NCTTSR
Trigger: CCGGGACGTTGTACAATTTCACCGTGTGGGCAGAGA...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTGGCAGACCACAGAGTaGGACACGACCTTCATTCCG +
Preference number: 4 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSWQTTE*DTTFIP
Trigger: CGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCA...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCCTTGGCGTTGTTCTCTaGAGCCGAAGCCACCATCTG +
Preference number: 4 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSLGVVL*SRSHHL
Trigger: CAGATGGTGGCTTCGGCTTCAGAGAACAACGCCAAG...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCTGCAGGAATACGTACTaGGCCTCAGTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPCRNTY*ASVCTI
Trigger: GATGGTGCAGACTGAGGCTCAGTACGTATTCCTGCA...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTGCTGAGGCTTGTCACTaGGTTGGGGACTGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAAEACH*VGDCGD
Trigger: ATCTCCACAGTCCCCAACGCAGTGACAAGCCTCAGC...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGCGCAAAGCAATGGTaGTGTTGGTCCAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPSAKQW*CWSSPA
Trigger: AGCAGGACTGGACCAACAGCACCATTGCTTTGCGCT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTACAGACAGTGTCTTCTaGTCCTCCACCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPATDSVF*SSTWRS
Trigger: GCTCCTCCAGGTGGAGGAGCAGAAGACACTGTCTGT...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAGGGAGCCCAGCCCTCTaGTCTTCCAGGAATCTGGGC +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEGSPAL*SSRNLG
Trigger: GCCCAGATTCCTGGAAGAGCAGAGGGCTGGGCTCCC...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCATGTGGATGGTGGGGTaGAGAGAGACCTTGGGCACA +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLMWMVG*RETLGT
Trigger: TGTGCCCAAGGTCTCTCTGCACCCCACCATCCACAT...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGGGGGATGTCCCTTGCTaGCCCACTGGACCCAGTATA +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGGDVPC*PTGPSI
Trigger: TATACTGGGTCCAGTGGGCCAGCAAGGGACATCCCC...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTGGCTCTGCGTGGAACTaGCTACGTCATTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAGSAWN*LRHSSL
Trigger: CAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCC...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCACAGAGGCTCTGCGTaGAACTGGCTACGTCATTCC +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLHRGSA*NWLRHS
Trigger: GGAATGACGTAGCCAGTTCCACGCAGAGCCTCTGTG...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCACAGAGGCTCTGCGTaGAACTGGCTACGTCATTCC +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSHRGSA*NWLRHS
Trigger: GGAATGACGTAGCCAGTTCCACGCAGAGCCTCTGTG...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCCATGAAGATCTGTCCTaGGAGCCCCGCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QDPSCLWSSSSQNSRPKFHEDLS*EPRCPP
Trigger: GGGAGGACAGCGGGGCTCCCAGGACAGATCTTCATG...GAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTAGCTGGGATGTCCCCTaGGGAGCTAAAGACCAGATC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPASWDVP*GAKDQI
Trigger: GATCTGGTCTTTAGCTCCCCAGGGGACATCCCAGCT...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGAGCCTGGCTCCTCATaGATGGGCTTCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSEPGSS*MGFRGT
Trigger: GGTGCCCCTGAAGCCCATCCATGAGGAGCCAGGCTC...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTTGTGGCAGGGGACCCTaGGTTGCAATGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLICGRGP*VAMNSW
Trigger: CCAGGAGTTCATTGCAACCCAGGGTCCCCTGCCACA...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTGCTCTTCCAGGAATCTaGGCTCAAGTGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAALPGI*AQVGVQ
Trigger: CTGGACACCCACTTGAGCCCAGATTCCTGGAAGAGC...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGAATACATGTGGATGGTaGGGTGCAGAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLNTCGW*GAERPW
Trigger: CCAAGGTCTCTCTGCACCCCACCATCCACATGTATT...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCAGTTCCTTTAGGGTaGTGTCAGTACCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAPVPLG*CQYLRC
Trigger: GCACCTCAGGTACTGACATCACCCTAAAGGAACTGG...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTTGCTGTTATAGCCTCTaGCCTCATTCCTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLICCYSL*PHSSRP
Trigger: GGGCCGAGAGGAATGAGGTCAGAGGCTATAACAGCA...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCACCACAGCATGACTaGGTTCTTAGTCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAPPQHD*VLSLSF
Trigger: GAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGG...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGTCCTGCTGGTCTGGTTaGCCCAATTCGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGSCWSG*PNSLGD
Trigger: ATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGA...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGTCTCTGCCCACACGGTaGAATTGTACAACGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGSLPTR*NCTTSR
Trigger: CCGGGACGTTGTACAATTTCACCGTGTGGGCAGAGA...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCTCTTCCTTACAAAGCTaGAGGGCCCAAGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLSSLQS*RAQGDP
Trigger: AGGGTCTCCTTGGGCCCTTCAGCTTTGTAAGGAAGA...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCATGCAGGAATACGTACTaGGCCTCAGTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPCRNTY*ASVCTI
Trigger: GATGGTGCAGACTGAGGCTCAGTACGTATTCCTGCA...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGCCACGTTCTCGTAGATaGGGTTTTCGACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLPRSRR*GFRHPH
Trigger: ATGAGGATGTCGAAAACCTCATCTACGAGAACGTGG...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTGAGATGCTGACATTCTaGCTGGAGCCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIEMLTF*LEPRAP
Trigger: TGGAGCACGTGGCTCCAGGCAGAATGTCAGCATCTC...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCTGTTGGTCCAGTCCTaGTTGCTGAGGCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPALLVQS*LLRLVT
Trigger: AGTGACAAGCCTCAGCAAGCAGGACTGGACCAACAG...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCGGAGGAACCGCAGGATaGACTGATGCAGGAATACGT +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSGGTAG*TDAGIR
Trigger: ACGTATTCCTGCATCAGTGCATCCTGCGGTTCCTCC...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGATGTGGATGGTGGGGTaGAGAGAGACCTTGGGCACA +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGMWMVG*RETLGT
Trigger: TGTGCCCAAGGTCTCTCTGCACCCCACCATCCACAT...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTGGTTTCTCACTGGGTTaGGGGCTGTGGTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVGFSLG*GLWWHF
Trigger: GAAATGCCACCACAGCCCCCAACCCAGTGAGAAACC...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTTCCAGCGCAAAGCAATaGTGCTGTTGGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPASSAKQ*CCWSSP
Trigger: AGGACTGGACCAACAGCACCATTGCTTTGCGCTGGA...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGCCCTTGCTGGCCCACTaGACCCAGTATACGTACAAC +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGPLLAH*TQYTYN
Trigger: GTTGTACGTATACTGGGTCCAGTGGGCCAGCAAGGG...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCTTGGTCCTGCTGGTCTaGTTGACCCAATTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSLVLLV*LTQFAW
Trigger: CCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAA...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAGCTGGGATGTCCCCTaGGGAGCTAAAGACCAGATC +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGSWDVP*GAKDQI
Trigger: GATCTGGTCTTTAGCTCCCCAGGGGACATCCCAGCT...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCATCATTCTTCCTGACGTaGTCAGCGAAGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTASFFLT*SAKSSA
Trigger: AGCTGAAGACTTCGCTGACCACGTCAGGAAGAATGA...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCACCAGGGAGAGTTGCTaGTACTCGTCTGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPTRESC*YSSAKP
Trigger: TGGTTTTGCAGACGAGTACCAGCAACTCTCCCTGGT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAAGGAAAAATACATGTaGATGGTGGGGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSKEKYM*MVGCRE
Trigger: CTCTCTGCACCCCACCATCCACATGTATTTTTCCTT...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTCCCTCTCATTCTTCCTaGCGTGGTCAGCGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIPSHSS*RGQRSL
Trigger: AAGACTTCGCTGACCACGTCAGGAAGAATGAGAGGG...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAGTTCTGGTTTCTGCTaGTTCTTCTTATTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSSSGFC*FFLFLL
Trigger: GAGGAGGAATAAGAAGAAGCAGCAGAAACCAGAACT...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCCTGAGTTCTGGTTTCTaGTGCTTCTTCTTATTCCTC +
Preference number: 4 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSLSSGF*CFFLFL
Trigger: GAGGAATAAGAAGAAGCAGCAGAAACCAGAACTCAG...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAACTGTGTCTGGGTATGTaGACGCACAGAGGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQELCLGM*THRGSA
Trigger: CGCAGAGCCTCTGTGCGTCCACATACCCAGACACAG...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTACCAGGGAGAGTTGCTaGTACTCGTCTGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPATRESC*YSSAKP
Trigger: TGGTTTTGCAGACGAGTACCAGCAACTCTCCCTGGT...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTGATGTAGTCAGAGCCTaGCTCCTCATGGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIDVVRA*LLMDGL
Trigger: AAGCCCATCCATGAGGAGCCAGGCTCTGACTACATC...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAAGCATGACCAGGGTGTaGCTCTGCTGTTCCCACACC +
Preference number: 4 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSSMTRV*LCCSHT
Trigger: GGTGTGGGAACAGCAGAGCCACACCCTGGTCATGCT...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAACTTGTGGGCCTGGATaGCGGCCACGTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQETCGPG*RPRSRR
Trigger: TCTACGAGAACGTGGCCGCCATCCAGGCCCACAAGT...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTCAGACCACTCTCTCCTaGGGAAACCAGAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVQTTLS*GNQSLG
Trigger: TCCCAAACTCTGGTTTCCCCAGGAGAGAGTGGTCTG...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTCAGACCACTCTCTCCTaGGGAAACCAGAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIQTTLS*GNQSLG
Trigger: TCCCAAACTCTGGTTTCCCCAGGAGAGAGTGGTCTG...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATACATGTGGATGGTaGGGTGCAGAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPNTCGW*GAERPW
Trigger: CCAAGGTCTCTCTGCACCCCACCATCCACATGTATT...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCACCACCACAGCATGACTaGGTTCTTAGTCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPPPQHD*VLSLSF
Trigger: GAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGG...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAAGGACCAGATCAAGTTaGCTCCATAGCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQERTRSS*LHSPLR
Trigger: CCTCAGCGGGCTATGGAGTCAACTTGATCTGGTCCT...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCTCTTCCTTACAAAGCTaGAGGGCCCAAGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: QDPSCLWSSSSQNSRPKFSSLQS*RAQGDP
Trigger: AGGGTCTCCTTGGGCCCTTCAGCTTTGTAAGGAAGA...GAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCTGCAAAACCACAGTTaGTGTCCCTCTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPALQNHS*CPSHSS
Trigger: GGAAGAATGAGAGGGACAGCAACTGTGGTTTTGCAG...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAACTGAACCCAGTAGTTaGAGTTCTGTGAGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPTEPSS*SSVSLG
Trigger: GCCTAGACTCACAGAACTCCAACTACTGGGTTCAGT...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAGTACCTGAGGTGCTTTaGGTCCTGGGGTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEVPEVL*VLGSVM
Trigger: CATGACTGACCCCAGGACCCAAAGCACCTCAGGTAC...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCTCATTCTTCCTGACGTaGTCAGCGAAGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSSFFLT*SAKSSA
Trigger: AGCTGAAGACTTCGCTGACCACGTCAGGAAGAATGA...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGCTCTTCCAGGAATCTaGGCTCAAGTGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSALPGI*AQVGVQ
Trigger: CTGGACACCCACTTGAGCCCAGATTCCTGGAAGAGC...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCATTTCTTTCTGCATCCTaGAAAGACCTAGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAFLSAS*KDLGNP
Trigger: TGGATTCCCTAGGTCTTTCCAGGATGCAGAAAGAAA...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTATGGAGCTGTTGGTCTaGGTCTCCATATGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIMELLV*VSIWRF
Trigger: AAACCTCCATATGGAGACTCAGACCAACAGCTCCAT...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTCCACGTTCTCGTAGATaGGGTTTTCGACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVPRSRR*GFRHPH
Trigger: ATGAGGATGTCGAAAACCTCATCTACGAGAACGTGG...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAACTGTTGGTCCAGTCCTaGTTGCTGAGGCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQELLVQS*LLRLVT
Trigger: AGTGACAAGCCTCAGCAAGCAGGACTGGACCAACAG...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAAGCGCAAAGCAATGGTaGTGTTGGTCCAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQESAKQW*CWSSPA
Trigger: AGCAGGACTGGACCAACAGCACCATTGCTTTGCGCT...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTTACGTCATTCCTCTCTaGCCACACGGTGAAATTGTA +
Preference number: 4 (lower is better)
Translates to: PSYHPSPPSGNQESRSPAYVIPL*PHGEIV
Trigger: TACAATTTCACCGTGTGGGCAGAGAGGAATGACGTA...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCATACGTCATTCCTCTCTaGCCACACGGTGAAATTGTA +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPYVIPL*PHGEIV
Trigger: TACAATTTCACCGTGTGGGCAGAGAGGAATGACGTA...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTCTGCAAAACCACAGTTaGTGTCCCTCTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLILQNHS*CPSHSS
Trigger: GGAAGAATGAGAGGGACAGCAACTGTGGTTTTGCAG...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAGGAGGAACCGCAGGATaGACTGATGCAGGAATACGT +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEGGTAG*TDAGIR
Trigger: ACGTATTCCTGCATCAGTGCATCCTGCGGTTCCTCC...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCATCTCAGCTGTCACACTaGTATTTGTTGTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: QGRILPAFGPQVARTPDPSQLSH*YLLCFG
Trigger: CCCGAAACACAACAAATACCAGTGTGACAGCTGAGA...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCTCTCAGCTGTCACACTaGTATTTGTTGTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSSQLSH*YLLCFG
Trigger: CCCGAAACACAACAAATACCAGTGTGACAGCTGAGA...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGCGCAAAGCAATaGTGCTGTTGGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQESSAKQ*CCWSSP
Trigger: AGGACTGGACCAACAGCACCATTGCTTTGCGCTGGA...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCATTGGTCCTGCTGGTCTaGTTGACCCAATTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSLVLLV*LTQFAW
Trigger: CCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAA...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCTTCTGTAGCGGTTCTTaGCGTTGTTCTCTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: QDPSCLWSSSSQNSRPKFFCSGS*RCSLKP
Trigger: CGGCTTCAGAGAACAACGCCAAGAACCGCTACAGAA...GAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCATGGAGCTGTTGGTCTaGGTCTCCATATGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: QDPSCLWSSSSQNSRPKFMELLV*VSIWRF
Trigger: AAACCTCCATATGGAGACTCAGACCAACAGCTCCAT...GAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAATTGGGAGCAGTGGCTaGAGTGAGGGTGCTGTTATA +
Preference number: 4 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSIGSSG*SEGAVI
Trigger: TATAACAGCACCCTCACTGCAGCCACTGCTCCCAAT...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCTGAGTTCTGGTTTCTaGTGCTTCTTCTTATTCCTC +
Preference number: 4 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSLSSGF*CFFLFL
Trigger: GAGGAATAAGAAGAAGCAGCAGAAACCAGAACTCAG...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCATTCTGTAGCGGTTCTTaGCGTTGTTCTCTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSFCSGS*RCSLKP
Trigger: CGGCTTCAGAGAACAACGCCAAGAACCGCTACAGAA...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTAAAAATACATGTGGATaGTGGGGTGCAGAGAGACCT +
Preference number: 4 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVKNTCG*WGAERP
Trigger: AGGTCTCTCTGCACCCCACCATCCACATGTATTTTT...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTAAGGAAAAATACATGTaGATGGTGGGGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVKEKYM*MVGCRE
Trigger: CTCTCTGCACCCCACCATCCACATGTATTTTTCCTT...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCACTGAGTTCTTAGTCTaGGTTTCATTCTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLTEFLV*VSFWRS
Trigger: AGATCTCCAGAATGAAACTCAGACTAAGAACTCAGT...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAACAGCCTGTTTCTTTCTaGATCCTGGAAAGACCTAGG +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEQPVSF*ILERPR
Trigger: CCTAGGTCTTTCCAGGATGCAGAAAGAAACAGGCTG...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCACAGCCTGTTTCTTTCTaGATCCTGGAAAGACCTAGG +
Preference number: 4 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSQPVSF*ILERPR
Trigger: CCTAGGTCTTTCCAGGATGCAGAAAGAAACAGGCTG...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAACTGAACCCAGTAGTTaGAGTTCTGTGAGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQETEPSS*SSVSLG
Trigger: GCCTAGACTCACAGAACTCCAACTACTGGGTTCAGT...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR TCA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGACTGAGTTCTTAGTCTaGGTTTCATTCTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGTEFLV*VSFWRS
Trigger: AGATCTCCAGAATGAAACTCAGACTAAGAACTCAGT...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR GCA 90 bp CAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCAGTTCTGGTTTCTGCTaGTTCTTCTTATTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QDPSCLWSSSSQNSRPKFSSGFC*FFLFLL
Trigger: GAGGAGGAATAAGAAGAAGCAGCAGAAACCAGAACT...GAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAAAAAATACATGTGGATaGTGGGGTGCAGAGAGACCT +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEKNTCG*WGAERP
Trigger: AGGTCTCTCTGCACCCCACCATCCACATGTATTTTT...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CCA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATTTCTTTCTGCATCCTaGAAAGACCTAGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEFLSAS*KDLGNP
Trigger: TGGATTCCCTAGGTCTTTCCAGGATGCAGAAAGAAA...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGGTTCCTCCCTGGGTaGGGGGCAGGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPRFLPG*GAGALA
Trigger: GGCCAGGGCGCCTGCCCCCAACCCAGGGAGGAACCT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCAGGTTCCTCCCTGGGTaGGGGGCAGGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSRFLPG*GAGALA
Trigger: GGCCAGGGCGCCTGCCCCCAACCCAGGGAGGAACCT...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACTCCGGGGATGTCCCTaGCTGGCCCACTGGACCCAG +
Preference number: 5 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTALRGCP*LAHWTQ
Trigger: CTGGGTCCAGTGGGCCAGCAAGGGACATCCCCGGAG...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CCA 90 bp GTGAGACACGACCTTCATTCCGTCCCAGATGGTCGTGATGGTGGCTaGGTAGGACCGAGCCGGCCCGAGACCCAACACAGACACAGCCTC +
Preference number: 5 (lower is better)
Translates to: VRHDLHSVPDGRDGG*VGPSRPETQHRHSL
Trigger: GAGGCTGTGTCTGTGTTGGGTCTCGGGCCGGCTCGGTCCTACCCAGCCACCATCACGACCATCTGGGACGGAATGAAGGTCGTGTCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 90 bp AGACCACAGAGTGAGACACGACCTTCATTCCGTCCCAGATGGTCGTaGTGGTGGCTGGGTAGGACCGAGCCGGCCCGAGACCCAACACAG +
Preference number: 5 (lower is better)
Translates to: RPQSETRPSFRPRWS*WWLGRTEPARDPTQ
Trigger: CTGTGTTGGGTCTCGGGCCGGCTCGGTCCTACCCAGCCACCATCACGACCATCTGGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CCA 90 bp TACCACGTCTCATTGGTCCTGCTGGTCTGGTTGACCCAATTCGCTTaGGGATCTTGCCCCCTCCGGGGATGTCCCTTGCTGGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: YHVSLVLLVWLTQFA*GSCPLRGCPLLAHW
Trigger: CCAGTGGGCCAGCAAGGGACATCCCCGGAGGGGGCAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 90 bp CAGTACCTGAGGTGCTTTGGGTCCTGGGGTCAGTCATGCCTTCCCTaGCCCATGAGACCCAGTAGCTGTAGGAAGACTGGCCTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: QYLRCFGSWGQSCLP*PMRPSSCRKTGLGP
Trigger: AGGGCCCAGGCCAGTCTTCCTACAGCTACTGGGTCTCATGGGTCAGGGAAGGCATGACTGACCCCAGGACCCAAAGCACCTCAGGTACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 90 bp GCTCCGGCAATGACCCCTGCACTCTCGGTGTGGCAGACCACAGAGTaGGACACGACCTTCATTCCGTCCCAGATGGTCGTGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: APAMTPALSVWQTTE*DTTFIPSQMVVMVA
Trigger: AGCCACCATCACGACCATCTGGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCACACCGAGAGTGCAGGGGTCATTGCCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS GCA 90 bp GGACGCACAGAGGCTCTGCGTGGAACTGGCTACGTCATTCCTCTCTaGCCACACGGTGAAATTGTACAACGTCCCGGGTTCCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GRTEALRGTGYVIPL*PHGEIVQRPGFQGL
Trigger: GAGGCCCTGGAACCCGGGACGTTGTACAATTTCACCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCCTCTGTGCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS GCA 90 bp CTCATCTTCCTTACAAAGCTGAAGGGCCCAAGGAGACCCTCGGACTaGAGCTGCCGGAGCAGGACGTCCAGGGCAATGAGGGTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LIFLTKLKGPRRPSD*SCRSRTSRAMRVPV
Trigger: CACAGGAACCCTCATTGCCCTGGACGTCCTGCTCCGGCAGCTGCAGTCCGAGGGTCTCCTTGGGCCCTTCAGCTTTGTAAGGAAGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CCA 90 bp TCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTaGGCTGCCGACCCAGCCCCCTCGTCACTTAGACCTCCAACTTGT +
Preference number: 5 (lower is better)
Translates to: SRNLGSSGCPELEDA*AADPAPSSLRPPTC
Trigger: ACAAGTTGGAGGTCTAAGTGACGAGGGGGCTGGGTCGGCAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAGTTGACCCAATTCGCTaGGGGATCTTGCCCCCTCCG +
Preference number: 5 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTAVDPIR*GILPPP
Trigger: CGGAGGGGGCAAGATCCCCAAGCGAATTGGGTCAAC...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCGCCCACCAGGGAGAGTaGCTGGTACTCGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: HSLLGKPEFGIPAPSSHSAHQGE*LVLVCK
Trigger: TTTGCAGACGAGTACCAGCAACTCTCCCTGGTGGGC...GCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 90 bp TCTGCACCATCAACGGCCGACTCTCTCTCATCTTCCTTACAAAGCTaGAGGGCCCAAGGAGACCCTCGGACTGCAGCTGCCGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SAPSTADSLSSSLQS*RAQGDPRTAAAGAG
Trigger: TCCTGCTCCGGCAGCTGCAGTCCGAGGGTCTCCTTGGGCCCTTCAGCTTTGTAAGGAAGATGAGAGAGAGTCGGCCGTTGATGGTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS GCA 90 bp TGGGGAGCTGTCCAGCGCAAAGCAATGGTGCTGTTGGTCCAGTCCTaGTTGCTGAGGCTTGTCACTGCGTTGGGGACTGTGGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: WGAVQRKAMVLLVQS*LLRLVTALGTVEML
Trigger: CAGCATCTCCACAGTCCCCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGACCAACAGCACCATTGCTTTGCGCTGGACAGCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS-3UTR CAA 90 bp CTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCACCCAAAGCAATGGTGCTGTaGGTCCAGTCCTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSWGNQSLGYQPPPPTAPKAMVL*VQSCLL
Trigger: CAGCAAGCAGGACTGGACCAACAGCACCATTGCTTT...GGGTGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGCCCACACGGTGAAATaGTACAACGTCCCGGGTTCC +
Preference number: 5 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLAHTVK*YNVPGS
Trigger: GGAACCCGGGACGTTGTACAATTTCACCGTGTGGGC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGTGGGGAAACCAGAGTTaGGGATACCAGCCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLWGNQS*GYQPPP
Trigger: AGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCA...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 90 bp GGCTCTGCGTGGAACTGGCTACGTCATTCCTCTCTGCCCACACGGTaGAATTGTACAACGTCCCGGGTTCCAGGGCCTCCACTTTGTACC +
Preference number: 5 (lower is better)
Translates to: GSAWNWLRHSSLPTR*NCTTSRVPGPPLCT
Trigger: GGTACAAAGTGGAGGCCCTGGAACCCGGGACGTTGTACAATTTCACCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 90 bp GCCTCCCTGGGGGCAGGACCAGATCAAGTTGACTCCATAGCCCGCTaGGGTGCTGACACAGGAAGTGATGGTGACTGTGTCTGGGTATGT +
Preference number: 5 (lower is better)
Translates to: ASLGAGPDQVDSIAR*GADTGSDGDCVWVC
Trigger: ACATACCCAGACACAGTCACCATCACTTCCTGTGTCAGCACCTCAGCGGGCTATGGAGTCAACTTGATCTGGTCCTGCCCCCAGGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 90 bp AGACCTCCAACTTGTGGGCCTGGATGGCGGCCACGTTCTCGTAGATaGGGTTTTCGACATCCTCATACGGGACTTCCTTCTCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RPPTCGPGWRPRSRR*GFRHPHTGLPSRLG
Trigger: CCCCAGCCGAGAAGGAAGTCCCGTATGAGGATGTCGAAAACCTCATCTACGAGAACGTGGCCGCCATCCAGGCCCACAAGTTGGAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGGCTTGTCACTGCGTaGGGGACTGTGGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPRLVTA*GTVEML
Trigger: CAGCATCTCCACAGTCCCCAACGCAGTGACAAGCCT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCAAGATCTGTGACCTCATaGGGAGCAGTGGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTARSVTS*GAVAAV
Trigger: CACTGCAGCCACTGCTCCCAATGAGGTCACAGATCT...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCACTCCGGGGATGTCCCTaGCTGGCCCACTGGACCCAG +
Preference number: 5 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSLRGCP*LAHWTQ
Trigger: CTGGGTCCAGTGGGCCAGCAAGGGACATCCCCGGAG...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCGTCCTGCTGGTCTGGTaGACCCAATTCGCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPVLLVW*TQFAWG
Trigger: TCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGAC...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGGGCCTGGTAGTGGAATaGGCGCACAGACAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLGLVVE*AHRQCL
Trigger: AAGACACTGTCTGTGCGCCAATTCCACTACCAGGCC...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 90 bp CAGCTTCTCAGCAATCCTGCACTCTCGGTGTGGCAGACCACAGAGTaGGACACGACCTTCATTCCGTCCCAGATGGTCGTGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: QLLSNPALSVWQTTE*DTTFIPSQMVVMVA
Trigger: AGCCACCATCACGACCATCTGGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCACACCGAGAGTGCAGGATTGCTGAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588559.5
CDS CCA 90 bp CCAGCTTCCAGTTCCTTTAGGGTGATGTCAGTACCTGAGGTGCTTTaGGTCCTGGGGTCAGTCATGCCTTCCCTGACCCATGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: PASSSFRVMSVPEVL*VLGSVMPSLTHETQ
Trigger: CTGGGTCTCATGGGTCAGGGAAGGCATGACTGACCCCAGGACCCAAAGCACCTCAGGTACTGACATCACCCTAAAGGAACTGGAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS-3UTR CAA 90 bp AGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCCAGGTTTCTCACTGGGTaGGGGGCTGTGGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: SYHPSPPSGNQESRSPAPRFLTG*GAVVAF
Trigger: AAATGCCACCACAGCCCCCAACCCAGTGAGAAACCT...GGGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTAGGCTTGTCACTGCGTaGGGGACTGTGGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: PSYHPSPPSGNQESRSPARLVTA*GTVEML
Trigger: CAGCATCTCCACAGTCCCCAACGCAGTGACAAGCCT...AGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTGTTGACCCAATTCGCTaGGGGATCTTGCCCCCTCCG +
Preference number: 5 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVVDPIR*GILPPP
Trigger: CGGAGGGGGCAAGATCCCCAAGCGAATTGGGTCAAC...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CTTCCAGGAATCTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTGGGCTGTTGTACCACGTCTCATaGGTCCTGCTGGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LPGIWAQVGVQSLRMPGLLYHVS*VLLVWL
Trigger: CAACCAGACCAGCAGGACCAATGAGACGTGGTACAA...CAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAGATTCCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAGGTTTCTCACTGGGTaGGGAGCTGTGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: QGRILPAFGPQVARTPDPRFLTG*GAVAVV
Trigger: CACTACTGCCACAGCTCCCAACCCAGTGAGAAACCT...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263434.5
CDS-3UTR CAA 90 bp CAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCTCCAGGGCCTCCACTTaGTACCACGTCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: QAIIPLLLQGTRNPDPQLSRAST*YHVSLV
Trigger: GACCAATGAGACGTGGTACAAAGTGGAGGCCCTGGA...GAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTAGGTTCCTCACTGGGTaGGGAGCTGTGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLIRFLTG*GAVAVV
Trigger: CACTACTGCCACAGCTCCCAACCCAGTGAGGAACCT...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376350.8
CDS-3UTR CAA 90 bp CAAGGCAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAGGTTTCTCACTGGGTaGGGAGCTGTGGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: QGRILPAFGPQVARTPDPRFLTG*GAVALV
Trigger: CACTAGTGCCACAGCTCCCAACCCAGTGAGAAACCT...TGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376350.8
CDS-3UTR CAA 90 bp ACTCTCTCCTGGGGAAACCAGAGTTTGGGATACCAGCCCCCTCCTCCCACAGCATCACACTGGTATTTGTaGTGTTTCGGGTCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: TLSWGNQSLGYQPPPPTASHWYL*CFGSLC
Trigger: GCACAGAGACCCGAAACACAACAAATACCAGTGTGA...TGCTGTGGGAGGAGGGGGCTGGTATCCCAAACTCTGGTTTCCCCAGGAGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp CAGGATCCTTCCTGCCTTTGGTCCTCAAGTAGCCAGAACTCCAGACCCAAATTCGTCCTGCTGGTCTGGTaGACCCAATTCGCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: QDPSCLWSSSSQNSRPKFVLLVW*TQFAWG
Trigger: TCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGAC...GAATTTGGGTCTGGAGTTCTGGCTACTTGAGGACCAAAGGCAGGAAGGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp AAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCCTTGTACCACGTCTCATaGGTCCTGCTGGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: KLSSLSSFREPGIQIPSSLYHVS*VLLVWL
Trigger: CAACCAGACCAGCAGGACCAATGAGACGTGGTACAA...GGAGCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 90 bp GGGTCTCCAGGGGCCTTCCACCACAGCATGACTGAGTTCTTAGTCTaGGTTTCATTCTGGAGATCTGTGACCTCATTGGGAGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GSPGAFHHSMTEFLV*VSFWRSVTSLGAVA
Trigger: AGCCACTGCTCCCAATGAGGTCACAGATCTCCAGAATGAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGGAAGGCCCCTGGAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS-3UTR CAA 90 bp CATAGGACTCATCTGAAGCCCACCAGACCACTCTCTCCTGGGGAAACCAGAGTTAAAGCAATGGTGCTGTaGGTCCAGTCCTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: HRTHLKPTRPLSPGETRVKAMVL*VQSCLL
Trigger: CAGCAAGCAGGACTGGACCAACAGCACCATTGCTTT...AACTCTGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGCCCACACGGTGAAATaGTACAACGTCCCGGGTTCC +
Preference number: 5 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSAHTVK*YNVPGS
Trigger: GGAACCCGGGACGTTGTACAATTTCACCGTGTGGGC...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAGCCCACCAGGGAGAGTaGCTGGTACTCGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQEAHQGE*LVLVCK
Trigger: TTTGCAGACGAGTACCAGCAACTCTCCCTGGTGGGC...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAAGGTTTCTCACTGGGTaGGGGGCTGTGGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSRFLTG*GAVVAF
Trigger: AAATGCCACCACAGCCCCCAACCCAGTGAGAAACCT...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp TCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAATCCAGATCCCCAGCTCACACTGGTATTTGTaGTGTTTCGGGTCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: SKLSSLSSFREPGIQIPSSHWYL*CFGSLC
Trigger: GCACAGAGACCCGAAACACAACAAATACCAGTGTGA...GCTGGGGATCTGGATTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp AAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGAACCAGGAAAGATCTGTGACCTCATaGGGAGCAGTGGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: KDLGNPSYHPSPPSGNQERSVTS*GAVAAV
Trigger: CACTGCAGCCACTGCTCCCAATGAGGTCACAGATCT...TTCCTGGTTCCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCATCCAGGGCCTCCACTTaGTACCACGTCTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSSRAST*YHVSLV
Trigger: GACCAATGAGACGTGGTACAAAGTGGAGGCCCTGGA...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp TCTGCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGCCTGGTAGTGGAATaGGCGCACAGACAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: SASWKDLGNPSYHPSPPSGLVVE*AHRQCL
Trigger: AAGACACTGTCTGTGCGCCAATTCCACTACCAGGCC...TGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 90 bp CAACTGAGAGTGGGGGTCTCCAGGGGCCTTCCACCACAGCATGACTaGGTTCTTAGTCTGAGTTTCATTCTGGAGATCTGTGACCTCATT +
Preference number: 5 (lower is better)
Translates to: QLRVGVSRGLPPQHD*VLSLSFILEICDLI
Trigger: AATGAGGTCACAGATCTCCAGAATGAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGGAAGGCCCCTGGAGACCCCCACTCTCAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS-3UTR CAA 90 bp GAGAGACCTTGGGCACAGGGACTCCCTCCGACCCCAGATTATAGAAGACTGATTTCTGCAAAACCACAGTaGCTGTCCCTCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: ERPWAQGLPPTPDYRRLISAKPQ*LSLSFF
Trigger: GAAGAATGAGAGGGACAGCAACTGTGGTTTTGCAGA...AATCAGTCTTCTATAATCTGGGGTCGGAGGGAGTCCCTGTGCCCAAGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS-3UTR CAA 90 bp GCATCCTGGAAAGACCTAGGGAATCCAAGCTATCATCCCTCTCCTCCTTCAGGGTCTGCAAAACCACAGTaGCTGTCCCTCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: ASWKDLGNPSYHPSPPSGSAKPQ*LSLSFF
Trigger: GAAGAATGAGAGGGACAGCAACTGTGGTTTTGCAGA...CCCTGAAGGAGGAGAGGGATGATAGCTTGGATTCCCTAGGTCTTTCCAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 72 bp CGGCCCGAGACCCAACACAGACACAGCCTCCCCACATaGAGATCTGTCCTGGGAGCCCCGCTGTCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: RPETQHRHSLPT*RSVLGAPLSSH
Trigger: GTGGGAGGACAGCGGGGCTCCCAGGACAGATCTTCATGTGGGGAGGCTGTGTCTGTGTTGGGTCTCGGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS GCA 72 bp TCCATCACTTCCTCACCTACCAGGGTTACCCGCAGGTaGCCATGGGTGCAGGGCTGCGAGTCCAGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SITSSPTRVTRR*PWVQGCESRGQ
Trigger: CTGGCCTCTGGACTCGCAGCCCTGCACCCATGGGCACCTGCGGGTAACCCTGGTAGGTGAGGAAGTGATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS GCA 72 bp AAGCTGAAGGGCCCAAGGAGACCCTCGGACTGCAGCTaGCGGAGCAGGACGTCCAGGGCAATGAGGGTTCCT +
Preference number: 6 (lower is better)
Translates to: KLKGPRRPSDCS*RSRTSRAMRVP
Trigger: AGGAACCCTCATTGCCCTGGACGTCCTGCTCCGGCAGCTGCAGTCCGAGGGTCTCCTTGGGCCCTTCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CCA 72 bp CTGGGCTCAAGTGGGTGTCCAGAGCTTGAGGATGCCTaGGCTGCCGACCCAGCCCCCTCGTCACTTAGACCT +
Preference number: 6 (lower is better)
Translates to: LGSSGCPELEDA*AADPAPSSLRP
Trigger: AGGTCTAAGTGACGAGGGGGCTGGGTCGGCAGCCCAGGCATCCTCAAGCTCTGGACACCCACTTGAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CAA 90 bp TGGCCTGGGCCCTGGGGAGCTGTCCAGCGCAAAGCAATGGTGCTGTaGGTCCAGTCCTGCTTGCTGAGGCTTGTCACTGCGTTGGGGACT +
Preference number: 6 (lower is better)
Translates to: WPGPWGAVQRKAMVL*VQSCLLRLVTALGT
Trigger: AGTCCCCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGACCAACAGCACCATTGCTTTGCGCTGGACAGCTCCCCAGGGCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp CCCTTGCTGGCCCACTGGACCCAGTATACGTACAACTaGGAGTGGGGGTCTCCAGGGGCCTTCCACCACAGC +
Preference number: 6 (lower is better)
Translates to: PLLAHWTQYTYN*EWGSPGAFHHS
Trigger: GCTGTGGTGGAAGGCCCCTGGAGACCCCCACTCTCAGTTGTACGTATACTGGGTCCAGTGGGCCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp AGTGAGACACGACCTTCATTCCGTCCCAGATGGTCGTaGTGGTGGCTGGGTAGGACCGAGCCGGCCCGAGAC +
Preference number: 6 (lower is better)
Translates to: SETRPSFRPRWS*WWLGRTEPARD
Trigger: GTCTCGGGCCGGCTCGGTCCTACCCAGCCACCATCACGACCATCTGGGACGGAATGAAGGTCGTGTCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS GCA 72 bp CTTACAAAGCTGAAGGGCCCAAGGAGACCCTCGGACTaGAGCTGCCGGAGCAGGACGTCCAGGGCAATGAGG +
Preference number: 6 (lower is better)
Translates to: LTKLKGPRRPSD*SCRSRTSRAMR
Trigger: CCTCATTGCCCTGGACGTCCTGCTCCGGCAGCTGCAGTCCGAGGGTCTCCTTGGGCCCTTCAGCTTTGTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CCA 72 bp GACCTTCATTCCGTCCCAGATGGTCGTGATGGTGGCTaGGTAGGACCGAGCCGGCCCGAGACCCAACACAGA +
Preference number: 6 (lower is better)
Translates to: DLHSVPDGRDGG*VGPSRPETQHR
Trigger: TCTGTGTTGGGTCTCGGGCCGGCTCGGTCCTACCCAGCCACCATCACGACCATCTGGGACGGAATGAAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp TTGGGTCCTGGGGTCAGTCATGCCTTCCCTGACCCATaGGACCCAGTAGCTGTAGGAAGACTGGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LGPGVSHAFPDP*DPVAVGRLAWA
Trigger: GGCCCAGGCCAGTCTTCCTACAGCTACTGGGTCTCATGGGTCAGGGAAGGCATGACTGACCCCAGGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CCA 72 bp CAGCACTGCAGTGCACAATGGGTGGGCCTCCCTCCATaGTCTGATCCAGCCACTGCCGAAGCATCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: QHCSAQWVGLPP*SDPATAEASSR
Trigger: TCTGGAGGATGCTTCGGCAGTGGCTGGATCAGACCATGGAGGGAGGCCCACCCATTGTGCACTGCAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CAA 72 bp CCCTGGGGAGCTGTCCAGCGCAAAGCAATGGTGCTGTaGGTCCAGTCCTGCTTGCTGAGGCTTGTCACTGCG +
Preference number: 6 (lower is better)
Translates to: PWGAVQRKAMVL*VQSCLLRLVTA
Trigger: CGCAGTGACAAGCCTCAGCAAGCAGGACTGGACCAACAGCACCATTGCTTTGCGCTGGACAGCTCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CCA 72 bp TCATTGGTCCTGCTGGTCTGGTTGACCCAATTCGCTTaGGGATCTTGCCCCCTCCGGGGATGTCCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: SLVLLVWLTQFA*GSCPLRGCPLL
Trigger: CAGCAAGGGACATCCCCGGAGGGGGCAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CCA 72 bp CTGTGTCTGGGTATGTGGACGCACAGAGGCTCTGCGTaGAACTGGCTACGTCATTCCTCTCTGCCCACACGG +
Preference number: 6 (lower is better)
Translates to: LCLGMWTHRGSA*NWLRHSSLPTR
Trigger: CCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCCTCTGTGCGTCCACATACCCAGACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp CTTTGTACCACGTCTCATTGGTCCTGCTGGTCTGGTTaGCCCAATTCGCTTGGGGATCTTGCCCCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: LCTTSHWSCWSG*PNSLGDLAPSG
Trigger: CCCGGAGGGGGCAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp ATGACCCCTGCACTCTCGGTGTGGCAGACCACAGAGTaGGACACGACCTTCATTCCGTCCCAGATGGTCGTG +
Preference number: 6 (lower is better)
Translates to: MTPALSVWQTTE*DTTFIPSQMVV
Trigger: CACGACCATCTGGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCACACCGAGAGTGCAGGGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 72 bp TCAACGGCCGACTCTCTCTCATCTTCCTTACAAAGCTaGAGGGCCCAAGGAGACCCTCGGACTGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: STADSLSSSLQS*RAQGDPRTAAA
Trigger: GGCAGCTGCAGTCCGAGGGTCTCCTTGGGCCCTTCAGCTTTGTAAGGAAGATGAGAGAGAGTCGGCCGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS GCA 72 bp GTCCAGCGCAAAGCAATGGTGCTGTTGGTCCAGTCCTaGTTGCTGAGGCTTGTCACTGCGTTGGGGACTGTG +
Preference number: 6 (lower is better)
Translates to: VQRKAMVLLVQS*LLRLVTALGTV
Trigger: CACAGTCCCCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGACCAACAGCACCATTGCTTTGCGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CAA 72 bp CCGGGTTCCAGGGCCTCCACTTTGTACCACGTCTCATaGGTCCTGCTGGTCTGGTTGACCCAATTCGCTTGG +
Preference number: 6 (lower is better)
Translates to: PGSRASTLYHVS*VLLVWLTQFAW
Trigger: CCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGAGGCCCTGGAACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CAA 90 bp TACAACGTCCCGGGTTCCAGGGCCTCCACTTTGTACCACGTCTCATaGGTCCTGCTGGTCTGGTTGACCCAATTCGCTTGGGGATCTTGC +
Preference number: 6 (lower is better)
Translates to: YNVPGSRASTLYHVS*VLLVWLTQFAWGSC
Trigger: GCAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGAGGCCCTGGAACCCGGGACGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp GCAAAGCAATGGTGCTGTTGGTCCAGTCCTGCTTGCTaGGGCTTGTCACTGCGTTGGGGACTGTGGAGATGC +
Preference number: 6 (lower is better)
Translates to: AKQWCCWSSPAC*GLSLRWGLWRC
Trigger: GCATCTCCACAGTCCCCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGACCAACAGCACCATTGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp TGGAACTGGCTACGTCATTCCTCTCTGCCCACACGGTaGAATTGTACAACGTCCCGGGTTCCAGGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: WNWLRHSSLPTR*NCTTSRVPGPP
Trigger: TGGAGGCCCTGGAACCCGGGACGTTGTACAATTTCACCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp GGGGCAGGACCAGATCAAGTTGACTCCATAGCCCGCTaGGGTGCTGACACAGGAAGTGATGGTGACTGTGTC +
Preference number: 6 (lower is better)
Translates to: GAGPDQVDSIAR*GADTGSDGDCV
Trigger: GACACAGTCACCATCACTTCCTGTGTCAGCACCTCAGCGGGCTATGGAGTCAACTTGATCTGGTCCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS TCA 72 bp AGCAATCCTGCACTCTCGGTGTGGCAGACCACAGAGTaGGACACGACCTTCATTCCGTCCCAGATGGTCGTG +
Preference number: 6 (lower is better)
Translates to: SNPALSVWQTTE*DTTFIPSQMVV
Trigger: CACGACCATCTGGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCACACCGAGAGTGCAGGATTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588559.5
CDS GCA 72 bp GAGGCTCTGCGTGGAACTGGCTACGTCATTCCTCTCTaGCCACACGGTGAAATTGTACAACGTCCCGGGTTC +
Preference number: 6 (lower is better)
Translates to: EALRGTGYVIPL*PHGEIVQRPGF
Trigger: GAACCCGGGACGTTGTACAATTTCACCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CAA 72 bp ACTTTGTACCACGTCTCATTGGTCCTGCTGGTCTGGTaGACCCAATTCGCTTGGGGATCTTGCCCCCTCCGG +
Preference number: 6 (lower is better)
Translates to: TLYHVSLVLLVW*TQFAWGSCPLR
Trigger: CCGGAGGGGGCAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CCA 72 bp TCCACTTTGTACCACGTCTCATTGGTCCTGCTGGTCTaGTTGACCCAATTCGCTTGGGGATCTTGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: STLYHVSLVLLV*LTQFAWGSCPL
Trigger: GAGGGGGCAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CCA 72 bp CTCATTCTTCCTGACGTGGTCAGCGAAGTCTTCAGCTaGGATGTCCCCTGGGGAGCTAAAGACCAGATCCCT +
Preference number: 6 (lower is better)
Translates to: LILPDVVSEVFS*DVPWGAKDQIP
Trigger: AGGGATCTGGTCTTTAGCTCCCCAGGGGACATCCCAGCTGAAGACTTCGCTGACCACGTCAGGAAGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CCA 72 bp AAACCACAGTTGCTGTCCCTCTCATTCTTCCTGACGTaGTCAGCGAAGTCTTCAGCTGGGATGTCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: KPQLLSLSFFLT*SAKSSAGMSPG
Trigger: CCCAGGGGACATCCCAGCTGAAGACTTCGCTGACCACGTCAGGAAGAATGAGAGGGACAGCAACTGTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CAA 90 bp CACACGGTGAAATTGTACAACGTCCCGGGTTCCAGGGCCTCCACTTaGTACCACGTCTCATTGGTCCTGCTGGTCTGGTTGACCCAATTC +
Preference number: 6 (lower is better)
Translates to: HTVKLYNVPGSRAST*YHVSLVLLVWLTQF
Trigger: GAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGAGGCCCTGGAACCCGGGACGTTGTACAATTTCACCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CAA 90 bp TGGCCCACCAGGGAGAGTTGCTGGTACTCGTCTGCAAAACCACAGTaGCTGTCCCTCTCATTCTTCCTGACGTGGTCAGCGAAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: WPTRESCWYSSAKPQ*LSLSFFLTWSAKSS
Trigger: TGAAGACTTCGCTGACCACGTCAGGAAGAATGAGAGGGACAGCAACTGTGGTTTTGCAGACGAGTACCAGCAACTCTCCCTGGTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 72 bp TCCTCTTCAGGAAGAAAATCAGCAGGCCCACGAGGATaGGAAACAGGAGGATGCCCACAAAGGCTCCGGCAA +
Preference number: 6 (lower is better)
Translates to: SSSGRKSAGPRG*ETGGCPQRLRQ
Trigger: TTGCCGGAGCCTTTGTGGGCATCCTCCTGTTTCTCATCCTCGTGGGCCTGCTGATTTTCTTCCTGAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 72 bp CTGCAAAACCACAGTTGCTGTCCCTCTCATTCTTCCTaGCGTGGTCAGCGAAGTCTTCAGCTGGGATGTCCC +
Preference number: 6 (lower is better)
Translates to: LQNHSCCPSHSS*RGQRSLQLGCP
Trigger: GGGACATCCCAGCTGAAGACTTCGCTGACCACGTCAGGAAGAATGAGAGGGACAGCAACTGTGGTTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 72 bp ACTTGTGGGCCTGGATGGCGGCCACGTTCTCGTAGATaGGGTTTTCGACATCCTCATACGGGACTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: TCGPGWRPRSRR*GFRHPHTGLPS
Trigger: AGAAGGAAGTCCCGTATGAGGATGTCGAAAACCTCATCTACGAGAACGTGGCCGCCATCCAGGCCCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS CCA 72 bp AGTTCCTTTAGGGTGATGTCAGTACCTGAGGTGCTTTaGGTCCTGGGGTCAGTCATGCCTTCCCTGACCCAT +
Preference number: 6 (lower is better)
Translates to: SSFRVMSVPEVL*VLGSVMPSLTH
Trigger: ATGGGTCAGGGAAGGCATGACTGACCCCAGGACCCAAAGCACCTCAGGTACTGACATCACCCTAAAGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CAA 72 bp AAATTGTACAACGTCCCGGGTTCCAGGGCCTCCACTTaGTACCACGTCTCATTGGTCCTGCTGGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: KLYNVPGSRAST*YHVSLVLLVWL
Trigger: CAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGAGGCCCTGGAACCCGGGACGTTGTACAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5
CDS CAA 72 bp AGGGAGAGTTGCTGGTACTCGTCTGCAAAACCACAGTaGCTGTCCCTCTCATTCTTCCTGACGTGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: RESCWYSSAKPQ*LSLSFFLTWSA
Trigger: CGCTGACCACGTCAGGAAGAATGAGAGGGACAGCAACTGTGGTTTTGCAGACGAGTACCAGCAACTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263434.5
ENST00000376350.8
CDS TCA 72 bp GGGGCCTTCCACCACAGCATGACTGAGTTCTTAGTCTaGGTTTCATTCTGGAGATCTGTGACCTCATTGGGA +
Preference number: 6 (lower is better)
Translates to: GAFHHSMTEFLV*VSFWRSVTSLG
Trigger: TCCCAATGAGGTCACAGATCTCCAGAATGAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGGAAGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263434.5
ENST00000376350.8
ENST00000588559.5