RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRE (Homo sapiens)

Ensembl gene IDs: ENSG00000132334

Ensembl transcript IDs: ENST00000254667.8, ENST00000306042.9, ENST00000442830.5, ENST00000455661.5, ENST00000463727.1, ENST00000467366.1, ENST00000471218.5, ENST00000479896.1, ENST00000487428.1, ENST00000492479.1, ENST00000495530.5

Found 953 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCCCCAGCGTGAGGTGCTCCAAGGCCCAGGAGATCCTGTGATCTaGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTA +
Preference number: 1 (lower is better)
Translates to: FPQREVLQGPGDPVI*GLGRGHEAVMTSPL
Trigger: TAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTGGAGCACCTCACGCTGGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 90 bp GGTCCTCCTTCCCTCTCCCATGACCTGGGTGGCAGACCAGTGTCCTaGCTCTACCCTAGGCCCATTTCTTGTCCTCCTCAAGGCCACAGC +
Preference number: 1 (lower is better)
Translates to: GPPSLSHDLGGRPVS*LYPRPISCPPQGHS
Trigger: GCTGTGGCCTTGAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCAGGTCATGGGAGAGGGAAGGAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR GCA 90 bp TTTTTCCCACTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTaGATGTGGCCCTGTCTTCTTGCCAGCTTTGCCTCCACTCCTCCC +
Preference number: 1 (lower is better)
Translates to: FFPLGEPPDSHSPAH*MWPCLLASFASTPP
Trigger: GGGAGGAGTGGAGGCAAAGCTGGCAAGAAGACAGGGCCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CCA 90 bp GCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTaGGCACCAAGTCTTGCCCTTGGATGGGGCTCAGAGCCGTGGAGT +
Preference number: 1 (lower is better)
Translates to: AGEDGGHKVCFRPSS*APSLALGWGSEPWS
Trigger: ACTCCACGGCTCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CCA 90 bp GGCAGCTGGACAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTaGTTTTGTTGTACCCAACGCCGTGGGTCAACGGGACCACCCAGC +
Preference number: 1 (lower is better)
Translates to: GSWTANGALGCNSDG*FCCTQRRGSTGPPS
Trigger: GCTGGGTGGTCCCGTTGACCCACGGCGTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTGTCCAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CCA 90 bp CAAAGTGTGCTTTCGTCCTTCCAGCTGGGCACCAAGTCTTGCCCTTaGATGGGGCTCAGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCC +
Preference number: 1 (lower is better)
Translates to: QSVLSSFQLGTKSCP*MGLRAVEWARSLIP
Trigger: GGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAGCTGGAAGGACGAAAGCACACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 90 bp CCGCTAAAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTaGGTCCTGGGGAAAGTGGCTTCTCCTTTGTTCCTGGAATGGAAA +
Preference number: 1 (lower is better)
Translates to: PLKGERCPGQWRGES*VLGKVASPLFLEWK
Trigger: TTTCCATTCCAGGAACAAAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTTTAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CCA 90 bp GTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTTaGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACGCCGTG +
Preference number: 1 (lower is better)
Translates to: VVWAKRQAAGQQMVL*GVTPMAGFVVPNAV
Trigger: CACGGCGTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 90 bp AGCAGGCCTGCTCCCAGCTGTTTCCAGATGGTGTTTGTTGAGCTGTaGCTCTGTCGAGGACAAGTCTATAACGAGGCACACCCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: SRPAPSCFQMVFVEL*LCRGQVYNEAHPPP
Trigger: GGGAGGAGGGTGTGCCTCGTTATAGACTTGTCCTCGACAGAGTCACAGCTCAACAAACACCATCTGGAAACAGCTGGGAGCAGGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CCA 90 bp AGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTaGGGAAAGTGGCTTCTCCTTTGTTCCTGGAATGGAAAAAGTTTG +
Preference number: 1 (lower is better)
Translates to: RANAVPDSGGESLAS*GKWLLLCSWNGKSL
Trigger: CAAACTTTTTCCATTCCAGGAACAAAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 90 bp CTTGCCCTTGGATGGGGCTCAGAGCCGTGGAGTGGGCGAGAAGCTTaGTTCCCTGTGAGCATCTATCAGAACAATAATGTGTCCTGGGGT +
Preference number: 1 (lower is better)
Translates to: LALGWGSEPWSGREA*FPVSIYQNNNVSWG
Trigger: ACCCCAGGACACATTATTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAGCCCCATCCAAGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 90 bp CTGAATCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTaGAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGT +
Preference number: 1 (lower is better)
Translates to: LNHCTEKERGARSAV*SPGMQLVRMAVTKC
Trigger: ACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 90 bp GATGGGGCTCAGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTaGGCATCTATCAGAACAATAATGTGTCCTGGGGTTGCATTTGCA +
Preference number: 1 (lower is better)
Translates to: DGAQSRGVGEKLDSL*ASIRTIMCPGVAFA
Trigger: TGCAAATGCAACCCCAGGACACATTATTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAGCCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 90 bp CGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGCGTaGATCATGGCCATCATGGCATCGATCACAATGAAGGTGCCCGTC +
Preference number: 1 (lower is better)
Translates to: RIRDTNSNTSTFCSA*IMAIMASITMKVPV
Trigger: GACGGGCACCTTCATTGTGATCGATGCCATGATGGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR TCA 90 bp CTGGCGAGCCTCAAAAAGCTCCATTTTCCTCTTCCGCCGAGATGCTaGATCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGT +
Preference number: 1 (lower is better)
Translates to: LASLKKLHFPLPPRC*IIVQRRREEHVQQC
Trigger: ACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGATTCAGCATCTCGGCGGAAGAGGAAAATGGAGCTTTTTGAGGCTCGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 90 bp TTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTaGCCCTCGACTTTGACTTCGAACTCTCAAATAAATGACCAGAGA +
Preference number: 1 (lower is better)
Translates to: FKDSDRGLLDMNQSR*PSTLTSNSQINDQR
Trigger: TCTCTGGTCATTTATTTGAGAGTTCGAAGTCAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 90 bp CGTGGTTATTCTACTGTTTCTATCCTAATGTGTGCTCCTCTGTACTaGGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAG +
Preference number: 1 (lower is better)
Translates to: RGYSTVSILMCAPLY*VCKTLSSSECLDGK
Trigger: CTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCACACATTAGGATAGAAACAGTAGAATAACCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 90 bp ACTGATGGCACTTTTCCTCTTTCCTTTCTTTCAAGTTTGTTAACATaGCGATGGTCGCAGACTTTTGCTCCCAGACCATTCTCCAGAAGT +
Preference number: 1 (lower is better)
Translates to: TDGTFPLSFLSSLLT*RWSQTFAPRPFSRS
Trigger: ACTTCTGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCATCGTCATGTTAACAAACTTGAAAGAAAGGAAAGAGGAAAAGTGCCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR TCA 90 bp AAGGGTATCATTCTTTATCTCAATCGTTATTTCTCCATGAGTAACTaGGCCCTCGGTTGGCCAATACTGGTAGCATTTATCCTGCTCTCT +
Preference number: 1 (lower is better)
Translates to: KGIILYLNRYFSMSN*ALGWPILVAFILLS
Trigger: AGAGAGCAGGATAAATGCTACCAGTATTGGCCAACCGAGGGCTCAGTTACTCATGGAGAAATAACGATTGAGATAAAGAATGATACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR TCA 90 bp GGGCTGATTGAGAGTGACCAGAAAGTCTCGTATACTGATGGCTTCTaGAAGGGTATCATTCTTTATCTCAATCGTTATTTCTCCATGAGT +
Preference number: 1 (lower is better)
Translates to: GLIESDQKVSYTDGF*KGIILYLNRYFSMS
Trigger: ACTCATGGAGAAATAACGATTGAGATAAAGAATGATACCCTTTCAGAAGCCATCAGTATACGAGACTTTCTGGTCACTCTCAATCAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR GCA 90 bp AACTTTACAGAAGTCCCCATTTACATTGTACCATCACGAACAGTTTaGCTTCCAAAAATGCTGCTGTTCAGGGTTGTGAATTCACTGTTA +
Preference number: 1 (lower is better)
Translates to: NFTEVPIYIVPSRTV*LPKMLLFRVVNSLL
Trigger: TAACAGTGAATTCACAACCCTGAACAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 90 bp GGTTGTGAATTCACTGTTAGGAAAGTGCATTTTCGAACTGACTTCTaGGTCCTCAACTGTTTTCTTAACATGAGCTTTGTGTTAGTATCT +
Preference number: 1 (lower is better)
Translates to: GCEFTVRKVHFRTDF*VLNCFLNMSFVLVS
Trigger: AGATACTAACACAAAGCTCATGTTAAGAAAACAGTTGAGGACTCAGAAGTCAGTTCGAAAATGCACTTTCCTAACAGTGAATTCACAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGCAGCCCAGGCCGCTGTaGCAGAACGGGAGGGGAGAA +
Preference number: 2 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKQPRPL*QNGRGE
Trigger: TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTG...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTCCTGCCCACTGCATGTaGCCCTGTCTTCTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAPAHCM*PCLLAS
Trigger: GCTGGCAAGAAGACAGGGCCACATGCAGTGGGCAGG...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR TCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAAGTGTTTGTTGAGCTGTaGCTCTGTCGAGGACAAGTC +
Preference number: 2 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEVFVEL*LCRGQV
Trigger: GACTTGTCCTCGACAGAGTCACAGCTCAACAAACAC...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGCGATTCCCACTCCCCTaGCCACTGCATGTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKRFPLP*PLHVAL
Trigger: CAGGGCCACATGCAGTGGGCAGGGGAGTGGGAATCG...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCGCACTACTCGGACCTaGTCCTCCTGGCGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCRTTRT*SSWRAW
Trigger: CCAGGCCCGCCAGGAGGAGCAGGTCCGAGTAGTGCG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTCTCAGAGCCGTGGAGTaGGCGAGAAGCTTGATTCCC +
Preference number: 2 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCALRAVE*ARSLIP
Trigger: GGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAG...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAACACATGGACCGAAACTaGGAACTTTACAGAAGTCCC +
Preference number: 2 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEHMDRN*ELYRSP
Trigger: GGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTG...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTATGGAGGGGAGAGTCTTaGGTCCTGGGGAAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVWRGES*VLGKVA
Trigger: AGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCA...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGTTGCCTGTCTGCTGCTaGTGCTTCTGCACGGCTGCG +
Preference number: 2 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWLPVCC*CFCTAA
Trigger: CGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAA...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGTTGTACCCAACGCCGTaGGTCAACGGGACCACCCAG +
Preference number: 2 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKLYPTP*VNGTTQ
Trigger: CTGGGTGGTCCCGTTGACCCACGGCGTTGGGTACAA...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGGAGAGTCTTGCGTCCTaGGGAAAGTGGCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQESLAS*GKWLLL
Trigger: AAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTC...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGCGCTGTCCCGGACAGTaGAGGGGAGAGTCTTGCGTC +
Preference number: 2 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLRCPGQ*RGESCV
Trigger: GACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCG...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCCCCTCTCCCATGACCTaGGTGGCAGACCAGTGTCCT +
Preference number: 2 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAPSPMT*VADQCP
Trigger: AGGACACTGGTCTGCCACCCAGGTCATGGGAGAGGG...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CAA 90 bp ACAAAGTGTGCTTTCGTCCTTCCAGCTGGGCACCAAGTCTTGCCCTaGGATGGGGCTCAGAGCCGTGGAGTGGGCGAGAAGCTTGATTCC +
Preference number: 2 (lower is better)
Translates to: TKCAFVLPAGHQVLP*DGAQSRGVGEKLDS
Trigger: GGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAGCTGGAAGGACGAAAGCACACTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGAGCAGGGCCCTTTCCTaGGGGCACCCTGAAAAGGTC +
Preference number: 2 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLSRALS*GHPEKV
Trigger: GACCTTTTCAGGGTGCCCTCAGGAAAGGGCCCTGCT...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGAGTCCCTCAGGGATTaGTTCCCCCAGCGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLESLRD*FPQREV
Trigger: CACCTCACGCTGGGGGAATCAATCCCTGAGGGACTC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTACTTTTTCCCACTTGGTaGGCCTCCCGATTCCCACTC +
Preference number: 2 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVLFPTW*ASRFPL
Trigger: GAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAAG...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAACCATCACGAACAGTTTaGCTTCCAAAAATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEPSRTV*LPKMLL
Trigger: CAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGG...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGCACGTTCAGCAGTGTaGAGCCCAGGCATGCAGCTG +
Preference number: 2 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLARSAV*SPGMQL
Trigger: CAGCTGCATGCCTGGGCTGCACACTGCTGAACGTGC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGCACTCCCCTGCCCACTaGATGTGGCCCTGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWHSPAH*MWPCLL
Trigger: AAGAAGACAGGGCCACATGCAGTGGGCAGGGGAGTG...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGGATCCCTGTGGAGTCTaGTTTGGGGCCGGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWDPCGV*FGAGFL
Trigger: GAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATC...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACTCGGGGAGACCCTGCTaGAGCAGGCCTGCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNSGRPC*SRPAPS
Trigger: GCTGGGAGCAGGCCTGCTGCAGCAGGGTCTCCCCGA...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp CTTCTGCTCCGCGTGCATCATGGCCATCATGGCATCGATCACAATGAAGGTGCCACGATGGGCCCAGCGTaGACGGGGTTGAGCGTCTTT +
Preference number: 2 (lower is better)
Translates to: LLLRVHHGHHGIDHNEGATMGPA*TGLSVF
Trigger: AAAGACGCTCAACCCCGTGCACGCTGGGCCCATCGT...GGCACCTTCATTGTGATCGATGCCATGATGGCCATGATGCACGCGGAGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR CAA 90 bp GGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTaGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACGCCGT +
Preference number: 2 (lower is better)
Translates to: GGLGQTTGSWTANGA*GCNSDGWFCCTQRR
Trigger: ACGGCGTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTAGTGGGCGAGAAGCTTaGTTCCCTGTGAGCATCTAT +
Preference number: 2 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCASGREA*FPVSIY
Trigger: ATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACT...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCTGGGCACCAAGTCTTaGCCTTGGATGGGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLLGTKS*PWMGLR
Trigger: TCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATTCAGCTGAGTTCACCTaGATGGCCTCGGCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: SLYREGERSTFSSVQPRHSAEFT*MASAGW
Trigger: CCACCCAGCCGAGGCCATGCAGGTGAACTCAGCTGA...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTGGTCAATCATGCCTTTaGCCTCGGCGGGAATCCCGA +
Preference number: 2 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLGQSCL*PRRESR
Trigger: TCGGGATTCCCGCCGAGGGCAAAGGCATGATTGACC...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp GATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGCGTGCACCAGCCTGGGGGCTTTaGAGCCGTCGGGGAGCTGTG +
Preference number: 2 (lower is better)
Translates to: DYGFETQIQTHPPSAPRAPAWGL*SRRGAV
Trigger: CACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGG...TGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR CCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAATGTAACTCCGATGGCTaGTTTTGTTGTACCCAACGC +
Preference number: 2 (lower is better)
Translates to: KGERCPGQWRGESCVLGKCNSDG*FCCTQR
Trigger: GCGTTGGGTACAACAAAACCAGCCATCGGAGTTACA...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTCAGCAAATGGTGCTTTaGGGTGTAACTCCGATGGCT +
Preference number: 2 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAQQMVL*GVTPMA
Trigger: AGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCTCAGAGCCGTGGAGTaGGCGAGAAGCTTGATTCCC +
Preference number: 2 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLLRAVE*ARSLIP
Trigger: GGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGCAGAACCCCTGCAGTaGACACCTGGGGTTGGTCTA +
Preference number: 2 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLAEPLQ*TPGVGL
Trigger: TAGACCAACCCCAGGTGTCCACTGCAGGGGTTCTGC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTATGGGAAGTTTTGTGTTaGGCCTCCAGGCATAGCACT +
Preference number: 2 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVWEVLC*ASRHST
Trigger: AGTGCTATGCCTGGAGGCTCAACACAAAACTTCCCA...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAAGTGGGCGAGAAGCTTaGTTCCCTGTGAGCATCTAT +
Preference number: 2 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVSGREA*FPVSIY
Trigger: ATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACT...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACGGCCAGCCGTGGAAGTaGAACTGGCGCACTACTCGG +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDGQPWK*NWRTTR
Trigger: CCGAGTAGTGCGCCAGTTTCACTTCCACGGCTGGCC...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAATTTGTGTTAGTATCTTaGAGAGGCACACTTCGCATA +
Preference number: 2 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEFVLVS*RGTLRI
Trigger: TATGCGAAGTGTGCCTCTGCAAGATACTAACACAAA...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGATGAACCAAAGCCGGTaGCCCTCGACTTTGACTTCG +
Preference number: 2 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWMNQSR*PSTLTS
Trigger: CGAAGTCAAAGTCGAGGGGCACCGGCTTTGGTTCAT...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGTCTTCTTGCCAGCTTTaGCTCCACTCCTCCCACACC +
Preference number: 2 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKSSCQL*LHSSHT
Trigger: GGTGTGGGAGGAGTGGAGGCAAAGCTGGCAAGAAGA...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTGCTCGGGGAGACCCTaGTGCAGCAGGCCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSCSGRP*CSRPAP
Trigger: GGGAGCAGGCCTGCTGCAGCAGGGTCTCCCCGAGCA...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTAACTCCGATGGCTaGTTTTGTTGTACCCAACGC +
Preference number: 2 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKCNSDG*FCCTQR
Trigger: GCGTTGGGTACAACAAAACCAGCCATCGGAGTTACA...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGTTTCGTCCTTCCAGCTaGGCACCAAGTCTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWFRPSS*APSLAL
Trigger: AAGGGCAAGACTTGGTGCCCAGCTGGAAGGACGAAA...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CTGAGGGCGCTGATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGGCTGTGAGACCAGCCTaGGGGCTTTGCAGCCGTCGG +
Preference number: 2 (lower is better)
Translates to: LRALITDSRHKFKHIHLLAVRPA*GLCSRR
Trigger: CCGACGGCTGCAAAGCCCCCAGGCTGGTCTCACAGC...CAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR TCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGAGTGCATTTTCGAACTaGCTTCTGAGTCCTCAACTG +
Preference number: 2 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKSAFSN*LLSPQL
Trigger: CAGTTGAGGACTCAGAAGTCAGTTCGAAAATGCACT...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGCTTCCGCCGAGATGCTaGATCATTGTACAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKLPPRC*IIVQRR
Trigger: CCTTCTCTGTACAATGATTCAGCATCTCGGCGGAAG...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGGGCTTCAAGGATTCTaGCAGAGGGCTCCTAGACAT +
Preference number: 2 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKGLQGF*QRAPRH
Trigger: ATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAACTAGGTGGTCTCAGCTaGGTTCACCTGCATGGCCTC +
Preference number: 2 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQLGGLS*VHLHGL
Trigger: GAGGCCATGCAGGTGAACTCAGCTGAGACCACCTAG...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR TCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGATCGTTATTTCTCCATaGGTAACTGAGCCCTCGGTT +
Preference number: 2 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKIVISP*VTEPSV
Trigger: AACCGAGGGCTCAGTTACTCATGGAGAAATAACGAT...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTCCATCACGAACAGTTTaGCTTCCAAAAATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAPSRTV*LPKMLL
Trigger: CAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGG...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGTGTGCTCCTCTGTACTaGGTGTGTAAGACGCTCAGT +
Preference number: 2 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWCAPLY*VCKTLS
Trigger: ACTGAGCGTCTTACACACGCAGTACAGAGGAGCACA...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATGGCGGTCACAAAGTGTaGTTTCGTCCTTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SLYREGERSTFSSVQPRHGGHKV*FRPSSW
Trigger: CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCC...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACGCACGTTCAGCAGTGTaGAGCCCAGGCATGCAGCTG +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDARSAV*SPGMQL
Trigger: CAGCTGCATGCCTGGGCTGCACACTGCTGAACGTGC...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAATCCTGCTCTCTCTCCTaGACCTCCGTCAGCATCACG +
Preference number: 2 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQSCSLS*TSVSIT
Trigger: CGTGATGCTGACGGAGGTGCAGGAGAGAGAGCAGGA...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCCAAACGACAGGCAGCTaGACAGCAAATGGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAQTTGS*TANGAL
Trigger: CAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTG...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTCAGCCCAGGCCGCTGTaGCAGAACGGGAGGGGAGAA +
Preference number: 2 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSQPRPL*QNGRGE
Trigger: TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTG...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGTGGACACCTGGGGTTaGTCTAAGGGGACAGGAAAA +
Preference number: 2 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKVDTWG*SKGTGK
Trigger: TTTTCCTGTCCCCTTAGACCAACCCCAGGTGTCCAC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCGGAGATCCTGTGATCTaGGGCCTTGGTAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCGDPVI*GLGRGH
Trigger: ATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCC...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGCGGCACTGGGCTGTTTaGGGGCTGTTTTGTTATGTA +
Preference number: 2 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWRHWAV*GLFCYV
Trigger: TACATAACAAAACAGCCCCCAAACAGCCCAGTGCCG...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGTGGGAAGTTTTGTGTTaGGCCTCCAGGCATAGCACT +
Preference number: 2 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKWEVLC*ASRHST
Trigger: AGTGCTATGCCTGGAGGCTCAACACAAAACTTCCCA...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGCTTCCGCCGAGATGCTaGATCATTGTACAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKLPPRC*IIVQRR
Trigger: CCTTCTCTGTACAATGATTCAGCATCTCGGCGGAAG...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCTTGATTCCCCCAGCGTaGGGTGCTCCAAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDALIPPA*GAPRPR
Trigger: CCTGGGCCTTGGAGCACCTCACGCTGGGGGAATCAA...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGTGGCGGGCCTGGGGCTaGTTGAGAGTGACCAGAAAG +
Preference number: 2 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMWRAWG*LRVTRK
Trigger: CTTTCTGGTCACTCTCAATCAGCCCCAGGCCCGCCA...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR TCA 90 bp CTGAGGGCGCTGATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGAGTCGGGCCAGCTGGTaGAGTGCAGCTGTGAGACCA +
Preference number: 2 (lower is better)
Translates to: LRALITDSRHKFKHIHLLSRASW*SAAVRP
Trigger: TGGTCTCACAGCTGCACTTCACCAGCTGGCCCGACT...CAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCAACGGGAGGGGAGAATaGGAGAGGCAGCTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCNGRGE*ERQLVF
Trigger: AAAAACCAGCTGCCTCTCCCATTCTCCCCTCCCGTT...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCGTGGACACCTGGGGTTaGTCTAAGGGGACAGGAAAA +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCVDTWG*SKGTGK
Trigger: TTTTCCTGTCCCCTTAGACCAACCCCAGGTGTCCAC...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGTTCCTCGGATCCCTGTaGAGTCTGCTTTGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMFLGSL*SLLWGR
Trigger: CCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAA...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CAA 90 bp GCCTCAAAAAGCTCCATTTTCCTCTTCCGCCGAGATGCTGAATCATaGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: ASKSSIFLFRRDAES*YREGERSTFSSVQP
Trigger: GGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGATTCAGCATCTCGGCGGAAGAGGAAAATGGAGCTTTTTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCGAAAGTCTCGTATACTaGTGGCTTCTGAAAGGGTAT +
Preference number: 2 (lower is better)
Translates to: VACLLLLLLHGCDEVNHAESLVY*WLLKGY
Trigger: ATACCCTTTCAGAAGCCATCAGTATACGAGACTTTC...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCTGTGCTCCTCTGTACTaGGTGTGTAAGACGCTCAGT +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCCAPLY*VCKTLS
Trigger: ACTGAGCGTCTTACACACGCAGTACAGAGGAGCACA...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCTTCTATCCTAATGTGTaGTCCTCTGTACTGCGTGTG +
Preference number: 2 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAFYPNV*SSVLRV
Trigger: CACACGCAGTACAGAGGAGCACACATTAGGATAGAA...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTTGGAGGGGAGAGTCTTaGGTCCTGGGGAAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISWRGES*VLGKVA
Trigger: AGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCA...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTGTACCCAACGCCGTaGGTCAACGGGACCACCCAG +
Preference number: 2 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSLYPTP*VNGTTQ
Trigger: CTGGGTGGTCCCGTTGACCCACGGCGTTGGGTACAA...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACTTTCTGAGGGTGGTCTaGGCCAAACGACAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDFLRVV*AKRQAA
Trigger: AGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCGGCACTGGGCTGTTTaGGGGCTGTTTTGTTATGTA +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCRHWAV*GLFCYV
Trigger: TACATAACAAAACAGCCCCCAAACAGCCCAGTGCCG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCTGCACGGTGATGGGGTaGTTGCCTGTCTGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDACTVMG*LPVCCC
Trigger: GCAGCAGCAGACAGGCAACCACCCCATCACCGTGCA...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR TCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCGAAGGAAACAAGAGATaGACTTTCCAGGTTGCACGG +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCEGNKR*TFQVAR
Trigger: CCGTGCAACCTGGAAAGTTCATCTCTTGTTTCCTTC...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAGGCAGACCAGTGTCCTaGCTCTACCCTAGGCCCATT +
Preference number: 2 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQGRPVS*LYPRPI
Trigger: AATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCC...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR TCA 90 bp CTTCCGGATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATTCAAGTTTGTTAACATaGCGATGGTCGCAGACTTTT +
Preference number: 2 (lower is better)
Translates to: LPDGVVDQNHAVLHAHPDSSLLT*RWSQTF
Trigger: AAAAGTCTGCGACCATCGTCATGTTAACAAACTTGA...ATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATCCGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR GCA 90 bp ATGGGGTGGTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCATCACTGTTAGGAAAGTaGATTTTCGAACTGACTTCT +
Preference number: 2 (lower is better)
Translates to: MGWLPVCCCCFCTAAMRSSLLGK*IFELTS
Trigger: AGAAGTCAGTTCGAAAATGCACTTTCCTAACAGTGA...TGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGATGAACTTTCCAGGTTaGACGGAGAAGATTCTGAGT +
Preference number: 2 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWMNFPG*TEKILS
Trigger: ACTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCAT...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCCAACTGTATAGCAGGTaGCCTTTAAGGCATAACAAA +
Preference number: 2 (lower is better)
Translates to: VACLLLLLLHGCDEVNHAQLYSR*PLRHNK
Trigger: TTTGTTATGCCTTAAAGGCCACCTGCTATACAGTTG...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAACAGCAAATGGTGCTTTaGGGTGTAACTCCGATGGCT +
Preference number: 2 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQQQMVL*GVTPMA
Trigger: AGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGTCTTGCCCTTGGATaGGGCTCAGAGCCGTGGAGT +
Preference number: 2 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQSLALG*GSEPWS
Trigger: ACTCCACGGCTCTGAGCCCCATCCAAGGGCAAGACT...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCGGAATGGAAAAAGTTTaGGAACAGGCAGAACCCCTG +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCGMEKV*EQAEPL
Trigger: CAGGGGTTCTGCCTGTTCCCAAACTTTTTCCATTCC...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACGAGAGTCTTGCGTCCTaGGGAAAGTGGCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDESLAS*GKWLLL
Trigger: AAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTC...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTGGAGATCCTGTGATCTaGGGCCTTGGTAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISGDPVI*GLGRGH
Trigger: ATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCC...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTCTTCTAATCACTATTTaGCATTTGAACCCAACTGCA +
Preference number: 2 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCALLITI*HLNPTA
Trigger: TGCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAG...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 90 bp GCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTaGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATAGCACTGGAC +
Preference number: 2 (lower is better)
Translates to: APLYCVCKTLSSSEC*DGKFCVEPPGIALD
Trigger: GTCCAGTGCTATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACGCACGGAGAAGATTCTaGGTCCCTCAGGGATTGATT +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDARRRF*VPQGLI
Trigger: AATCAATCCCTGAGGGACTCAGAATCTTCTCCGTGC...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGTCACTATTTGGCATTTaGACCCAACTGCATGCAACA +
Preference number: 2 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKSLFGI*TQLHAT
Trigger: TGTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGA...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACGATGTCTCCAAATGCTaGAACACAGGTGTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDDVSKC*NTGVRL
Trigger: GAGCCTGACACCTGTGTTTCAGCATTTGGAGACATC...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGAAGCTTGATTCCCTGTaGGCATCTATCAGAACAATA +
Preference number: 2 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKKLDSL*ASIRTI
Trigger: TATTGTTCTGATAGATGCTCACAGGGAATCAAGCTT...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCTGGTCGGGCCAGTACTaGTGGCACTTTTCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: HIRLNHLRALITDSRHKFWSGQY*WHFSSF
Trigger: GAAAGAGGAAAAGTGCCATCAGTACTGGCCCGACCA...GAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR GCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGATAGGGGACGAACACTaGAACATGAGGGTGCGATCA +
Preference number: 2 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMIGDEH*NMRVRS
Trigger: TGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTAT...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCATGAACTTTCCAGGTTaGACGGAGAAGATTCTGAGT +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCMNFPG*TEKILS
Trigger: ACTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCAT...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATGCATTTGAACCCAACTaGATGCAACAAAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: SLYREGERSTFSSVQPRHAFEPN*MQQRKV
Trigger: CACTTTCCTTTGTTGCATGCAGTTGGGTTCAAATGC...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTGGCCCTGTCTTCTTaGCAGCTTTGCCTCCACTCC +
Preference number: 2 (lower is better)
Translates to: YCVCKTLSSSECLDGKFCVALSS*QLCLHS
Trigger: GGAGTGGAGGCAAAGCTGGCAAGAAGACAGGGCCAC...ACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGTTCATCTGAATGTTTaGATGGGAAGTTTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKVHLNV*MGSFVL
Trigger: CAACACAAAACTTCCCATCCAAACATTCAGATGAAC...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGCTTCTCCTTTGTTCCTaGAATGGAAAAAGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKLLLCS*NGKSLG
Trigger: TCCCAAACTTTTTCCATTCCAGGAACAAAGGAGAAG...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTCAGCCTTTTCCTAGGTaGTCTCAGCTGAGTTCACCT +
Preference number: 2 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISQPFPR*SQLSSP
Trigger: AGGTGAACTCAGCTGAGACCACCTAGGAAAAGGCTG...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR TCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACAGTGCATTTTCGAACTaGCTTCTGAGTCCTCAACTG +
Preference number: 2 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNSAFSN*LLSPQL
Trigger: CAGTTGAGGACTCAGAAGTCAGTTCGAAAATGCACT...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGCACATGGACCGAAACTaGGAACTTTACAGAAGTCCC +
Preference number: 2 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMHMDRN*ELYRSP
Trigger: GGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTG...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCAAGCTTGATTCCCTGTaGGCATCTATCAGAACAATA +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCKLDSL*ASIRTI
Trigger: TATTGTTCTGATAGATGCTCACAGGGAATCAAGCTT...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCGGCGGTCACAAAGTGTaGTTTCGTCCTTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LVCILHSYSTWRETVKAVGGHKV*FRPSSW
Trigger: CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCC...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCTTGAACCCAACTGCATaGAACAAAGGAAAGTGTGAA +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCLNPTA*NKGKCE
Trigger: TTCACACTTTCCTTTGTTGCATGCAGTTGGGTTCAA...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCATGGTCGCAGACTTTTaGTCCCAGACCATTCTCCAG +
Preference number: 2 (lower is better)
Translates to: HIRLNHLRALITDSRHKFMVADF*SQTILQ
Trigger: CTGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCAT...GAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR CCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATCAACTGTATAGCAGGTaGCCTTTAAGGCATAACAAA +
Preference number: 2 (lower is better)
Translates to: SLYREGERSTFSSVQPRHQLYSR*PLRHNK
Trigger: TTTGTTATGCCTTAAAGGCCACCTGCTATACAGTTG...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCATTCATATAGCACATaGAGAGAAACCGTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCHSYST*RETVKA
Trigger: TGCCTTTACGGTTTCTCTCCATGTGCTATATGAATG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATCATTCATATAGCACATaGAGAGAAACCGTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: SLYREGERSTFSSVQPRHHSYST*RETVKA
Trigger: TGCCTTTACGGTTTCTCTCCATGTGCTATATGAATG...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCTTAAAGGTACTTCTTaGTACAAGAGATGCCAGTTA +
Preference number: 2 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCLKGTS*YKRCQL
Trigger: TAACTGGCATCTCTTGTATCAAGAAGTACCTTTAAG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGACCAGATGGTGTTTGTTaGGCTGTGACTCTGTCGAGG +
Preference number: 2 (lower is better)
Translates to: WTETENFTEVPIYIVPSRPDGVC*AVTLSR
Trigger: CCTCGACAGAGTCACAGCTCAACAAACACCATCTGG...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR TCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATAAAAGGATCACTCGGTTaGAGTCATCTGCAGTGCTCG +
Preference number: 2 (lower is better)
Translates to: LSSSECLDGKFCVEPPGIKGSLG*SHLQCS
Trigger: CGAGCACTGCAGATGACTTCAACCGAGTGATCCTTT...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR GCA 90 bp TTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCAAACACATGGAGCTGTGGCTGTATaGAGAACTTCCGGATGGTGT +
Preference number: 2 (lower is better)
Translates to: FEPSEGADYGFETQIQTHGAVAV*RTSGWC
Trigger: ACACCATCCGGAAGTTCTGCATACAGCCACAGCTCC...ATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR CCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATACAGCAAATGGTGCTTTaGGGTGTAACTCCGATGGCT +
Preference number: 2 (lower is better)
Translates to: LSSSECLDGKFCVEPPGIQQMVL*GVTPMA
Trigger: AGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATGTTCATCTGAATGTTTaGATGGGAAGTTTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: SLYREGERSTFSSVQPRHVHLNV*MGSFVL
Trigger: CAACACAAAACTTCCCATCCAAACATTCAGATGAAC...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATACACACAGATCAGAATaGTCGTCTTCTAATCACTAT +
Preference number: 2 (lower is better)
Translates to: SLYREGERSTFSSVQPRHTHRSE*SSSNHY
Trigger: ATAGTGATTAGAAGACGACCATTCTGATCTGTGTGT...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCCTGTGGAGTCTGCTTTaGGGCCGGGTTTCTCAAGTT +
Preference number: 2 (lower is better)
Translates to: LVCILHSYSTWRETVKAVLWSLL*GRVSQV
Trigger: AACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAG...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR TCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCTAGGGTTCAGGTGCTaGACAGAAGCTTACTTCCCT +
Preference number: 2 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPLGFRC*TEAYFP
Trigger: AGGGAAGTAAGCTTCTGTTCAGCACCTGAACCCTAG...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAAGAGTCCCTCAGGGATTaGTTCCCCCAGCGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: DIFLFILCTSARYLMAIEESLRD*FPQREV
Trigger: CACCTCACGCTGGGGGAATCAATCCCTGAGGGACTC...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATATCACTGTTAGGAAAGTaGATTTTCGAACTGACTTCT +
Preference number: 2 (lower is better)
Translates to: RGSTGPPSIYISSRSAKISLLGK*IFELTS
Trigger: AGAAGTCAGTTCGAAAATGCACTTTCCTAACAGTGA...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTATAGGGGACGAACACTaGAACATGAGGGTGCGATCA +
Preference number: 2 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPIGDEH*NMRVRS
Trigger: TGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTAT...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATAACGGGAGGGGAGAATaGGAGAGGCAGCTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNNGRGE*ERQLVF
Trigger: AAAAACCAGCTGCCTCTCCCATTCTCCCCTCCCGTT...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACCTTCTCCTTTGTTCCTaGAATGGAAAAAGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDLLLCS*NGKSLG
Trigger: TCCCAAACTTTTTCCATTCCAGGAACAAAGGAGAAG...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACACAATGGACTTTCTTTaGCTGAAGGAAACAAGAGAT +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDTMDFL*LKETRD
Trigger: ATCTCTTGTTTCCTTCAGTCAAAGAAAGTCCATTGT...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTTTTGTGTTAGTATCTTaGAGAGGCACACTTCGCATA +
Preference number: 2 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISFVLVS*RGTLRI
Trigger: TATGCGAAGTGTGCCTCTGCAAGATACTAACACAAA...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACTCACTGTTAGGAAAGTaGATTTTCGAACTGACTTCT +
Preference number: 2 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDSLLGK*IFELTS
Trigger: AGAAGTCAGTTCGAAAATGCACTTTCCTAACAGTGA...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATTGTGCTCCTCTGTACTaGGTGTGTAAGACGCTCAGT +
Preference number: 2 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNCAPLY*VCKTLS
Trigger: ACTGAGCGTCTTACACACGCAGTACAGAGGAGCACA...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAACTGGGCACCAAGTCTTaGCCTTGGATGGGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: DIFLFILCTSARYLMAIELGTKS*PWMGLR
Trigger: TCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAG...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTTGTAACTCCGATGGCTaGTTTTGTTGTACCCAACGC +
Preference number: 2 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPCNSDG*FCCTQR
Trigger: GCGTTGGGTACAACAAAACCAGCCATCGGAGTTACA...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAAACGACAGGCAGCTaGACAGCAAATGGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: FPRQSILSGNGIITVIQCQTTGS*TANGAL
Trigger: CAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTG...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGTGTAAGATTCAGTGTTaGTACATTCACACCCCATTC +
Preference number: 2 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMCKIQC*YIHTPF
Trigger: GAATGGGGTGTGAATGTACCAACACTGAATCTTACA...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTCATTCATATAGCACATaGAGAGAAACCGTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISHSYST*RETVKA
Trigger: TGCCTTTACGGTTTCTCTCCATGTGCTATATGAATG...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 90 bp CCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATaGTACCATCACGAACAGTTTGCCTTCCAAAAATGCTGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: PHGPKLRTLQKSPFT*YHHEQFAFQKCCCS
Trigger: TGAACAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGAAGTGCATTTTCGAACTaGCTTCTGAGTCCTCAACTG +
Preference number: 2 (lower is better)
Translates to: WTETENFTEVPIYIVPSRSAFSN*LLSPQL
Trigger: CAGTTGAGGACTCAGAAGTCAGTTCGAAAATGCACT...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGGGCTTCAAGGATTCTaGCAGAGGGCTCCTAGACAT +
Preference number: 2 (lower is better)
Translates to: PFKTLVCILHSYSTWRETGLQGF*QRAPRH
Trigger: ATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCC...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCTGTAAGATTCAGTGTTaGTACATTCACACCCCATTC +
Preference number: 2 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDACKIQC*YIHTPF
Trigger: GAATGGGGTGTGAATGTACCAACACTGAATCTTACA...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTGACGCTCAGTTCATCTaGATGTTTGGATGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: FPRQSILSGNGIITVIQCDAQFI*MFGWEV
Trigger: AACTTCCCATCCAAACATTCAGATGAACTGAGCGTC...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATGACGCTCAGTTCATCTaGATGTTTGGATGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNDAQFI*MFGWEV
Trigger: AACTTCCCATCCAAACATTCAGATGAACTGAGCGTC...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCCTAGGGTTCAGGTGCTaGACAGAAGCTTACTTCCCT +
Preference number: 2 (lower is better)
Translates to: PFKTLVCILHSYSTWRETLGFRC*TEAYFP
Trigger: AGGGAAGTAAGCTTCTGTTCAGCACCTGAACCCTAG...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCCATCACGAACAGTTTaGCTTCCAAAAATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: FPRQSILSGNGIITVIQCPSRTV*LPKMLL
Trigger: CAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGG...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCATAGGGGACGAACACTaGAACATGAGGGTGCGATCA +
Preference number: 2 (lower is better)
Translates to: PFKTLVCILHSYSTWRETIGDEH*NMRVRS
Trigger: TGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTAT...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCGCGATCAGTTATCAGTaGAAATGTCAAATAAGGCCT +
Preference number: 2 (lower is better)
Translates to: LVCILHSYSTWRETVKAVAISYQ*KCQIRP
Trigger: AGGCCTTATTTGACATTTTCACTGATAACTGATCGC...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 90 bp TCACACACAGATCAGAATGGTCGTCTTCTAATCACTATTTGGCATTaGAACCCAACTGCATGCAACAAAGGAAAGTGTGAAAGGAACAAT +
Preference number: 2 (lower is better)
Translates to: SHTDQNGRLLITIWH*NPTACNKGKCERNN
Trigger: ATTGTTCCTTTCACACTTTCCTTTGTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAGACGACCATTCTGATCTGTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR GCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGCCGTCTATGAAGGATaGGTTGATGTAGTCTGTGTA +
Preference number: 2 (lower is better)
Translates to: PFKTLVCILHSYSTWRETAVYEG*VDVVCV
Trigger: TACACAGACTACATCAACGCATCCTTCATAGACGGC...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTGTTCATCTGAATGTTTaGATGGGAAGTTTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPVHLNV*MGSFVL
Trigger: CAACACAAAACTTCCCATCCAAACATTCAGATGAAC...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR TCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGCGATCAGTTATCAGTaGAAATGTCAAATAAGGCCT +
Preference number: 2 (lower is better)
Translates to: PFKTLVCILHSYSTWRETAISYQ*KCQIRP
Trigger: AGGCCTTATTTGACATTTTCACTGATAACTGATCGC...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAACAACTGTATAGCAGGTaGCCTTTAAGGCATAACAAA +
Preference number: 2 (lower is better)
Translates to: DIFLFILCTSARYLMAIEQLYSR*PLRHNK
Trigger: TTTGTTATGCCTTAAAGGCCACCTGCTATACAGTTG...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAACTCCGATGGCTGGTTTaGTTGTACCCAACGCCGTGG +
Preference number: 3 (lower is better)
Translates to: PGIALDQPRPLWQNGRGELRWLV*LYPTPW
Trigger: CCACGGCGTTGGGTACAACAAAACCAGCCATCGGAG...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 72 bp CTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTaGATGTGGCCCTGTCTTCTTGCCAGCTTTGCCTCC +
Preference number: 3 (lower is better)
Translates to: LGEPPDSHSPAH*MWPCLLASFAS
Trigger: GGAGGCAAAGCTGGCAAGAAGACAGGGCCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR GCA 72 bp GTGGTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTaGGATGAGGTCAATCATGCCTTTGCCCTCGGCGGG +
Preference number: 3 (lower is better)
Translates to: VVACLLLLLLHG*DEVNHAFALGG
Trigger: CCCGCCGAGGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp ATGGGCCCAGCGTGCACGGGGTTGAGCGTCTTTACTTTCTTGAGGAACTTCAGCACCAGCCTGGGGGCTTaGCAGCCGTCGGGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: MGPACTGLSVFTFLRNFSTSLGA*QPSGSC
Trigger: ACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGGT...GCTGAAGTTCCTCAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGGGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR GCA 72 bp GGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTaGGTCCTGGGGAAAGTGGCTTCTCCTTTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: GERCPGQWRGES*VLGKVASPLFL
Trigger: CAGGAACAAAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 72 bp TGCACGGTGATGGGGTGGTTGCCTGTCTGCTGCTGCTaGTTCTGCACGGCTGCGATGAGGTCAATCATGCCT +
Preference number: 3 (lower is better)
Translates to: CTVMGWLPVCCC*FCTAAMRSIMP
Trigger: AGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCATCACCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR GCA 72 bp CAGTGCACGGTGATGGGGTGGTTGCCTGTCTGCTGCTaGTGCTTCTGCACGGCTGCGATGAGGTCAATCATG +
Preference number: 3 (lower is better)
Translates to: QCTVMGWLPVCC*CFCTAAMRSIM
Trigger: CATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCATCACCGTGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAGAGTGGGCGAGAAGCTaGATTCCCTGTGAGCATCTA +
Preference number: 3 (lower is better)
Translates to: KGERCPGQWRGESCVLGKEWARS*IPCEHL
Trigger: TAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTC...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGTTCTCTTTTTCCCACTaGGTGAGCCTCCCGATTCCC +
Preference number: 3 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQFSFSH*VSLPIP
Trigger: GGGAATCGGGAGGCTCACCAAGTGGGAAAAAGAGAA...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAACTTTGTGTTAGTATCTaGCAGAGGCACACTTCGCAT +
Preference number: 3 (lower is better)
Translates to: PGIALDQPRPLWQNGRGELCVSI*QRHTSH
Trigger: ATGCGAAGTGTGCCTCTGCAAGATACTAACACAAAG...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGCGATGGCTGGTTTTGTaGTACCCAACGCCGTGGGTC +
Preference number: 3 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWRWLVL*YPTPWV
Trigger: GACCCACGGCGTTGGGTACAACAAAACCAGCCATCG...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGCGATGGCTGGTTTTGTaGTACCCAACGCCGTGGGTC +
Preference number: 3 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKRWLVL*YPTPWV
Trigger: GACCCACGGCGTTGGGTACAACAAAACCAGCCATCG...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGCTCCGATGGCTGGTTTaGTTGTACCCAACGCCGTGG +
Preference number: 3 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWLRWLV*LYPTPW
Trigger: CCACGGCGTTGGGTACAACAAAACCAGCCATCGGAG...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGACAGCAAATGGTGCTTaGGGGTGTAACTCCGATGGC +
Preference number: 3 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKTANGA*GCNSDG
Trigger: GCCATCGGAGTTACACCCCAAAGCACCATTTGCTGT...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 72 bp AGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTaGTTTCGTCCTTCCAGCTGGGCACCAAGTCTTGCC +
Preference number: 3 (lower is better)
Translates to: RHAAGEDGGHKV*FRPSSWAPSLA
Trigger: GGCAAGACTTGGTGCCCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CCA 72 bp GATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTaGGCACCAAGTCTTGCCCTTGGATGGGGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: DGGHKVCFRPSS*APSLALGWGSE
Trigger: CTCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CCA 72 bp GCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTaGGGAAAGTGGCTTCTCCTTTGTTCCTGGAATGGA +
Preference number: 3 (lower is better)
Translates to: AVPDSGGESLAS*GKWLLLCSWNG
Trigger: TCCATTCCAGGAACAAAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAACAGCAAATGGTGCTTaGGGGTGTAACTCCGATGGC +
Preference number: 3 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVTANGA*GCNSDG
Trigger: GCCATCGGAGTTACACCCCAAAGCACCATTTGCTGT...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAGAGTGGGCGAGAAGCTaGATTCCCTGTGAGCATCTA +
Preference number: 3 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVEWARS*IPCEHL
Trigger: TAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTC...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CTTCCGGATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGATGGTCGCAGACTTTaGCTCCCAGACCATTCTCCA +
Preference number: 3 (lower is better)
Translates to: LPDGVVDQNHAVLHAHPDDGRRL*LPDHSP
Trigger: TGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCATC...ATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATCCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR TCA 72 bp TCCCTCTCCCATGACCTGGGTGGCAGACCAGTGTCCTaGCTCTACCCTAGGCCCATTTCTTGTCCTCCTCAA +
Preference number: 3 (lower is better)
Translates to: SLSHDLGGRPVS*LYPRPISCPPQ
Trigger: TTGAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCAGGTCATGGGAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CCA 72 bp TTCTTGTCCTCCTCAAGGCCACAGCCTTTTCCTAGGTaGTCTCAGCTGAGTTCACCTGCATGGCCTCGGCTG +
Preference number: 3 (lower is better)
Translates to: FLSSSRPQPFPR*SQLSSPAWPRL
Trigger: CAGCCGAGGCCATGCAGGTGAACTCAGCTGAGACCACCTAGGAAAAGGCTGTGGCCTTGAGGAGGACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAACCATCACGAACAGTTaGCCTTCCAAAAATGCTGCT +
Preference number: 3 (lower is better)
Translates to: KGERCPGQWRGESCVLGKTITNS*PSKNAA
Trigger: AGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGGT...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGTCGGCACTGGGCTGTTaGGGGGCTGTTTTGTTATGT +
Preference number: 3 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWSALGC*GAVLLC
Trigger: ACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGA...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTCCAGATGGTGTTTGTaGAGCTGTGACTCTGTCGAG +
Preference number: 3 (lower is better)
Translates to: VACLLLLLLHGCDEVNHASRWCL*SCDSVE
Trigger: CTCGACAGAGTCACAGCTCAACAAACACCATCTGGA...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CCA 72 bp AAGTCTTGCCCTTGGATGGGGCTCAGAGCCGTGGAGTaGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCA +
Preference number: 3 (lower is better)
Translates to: KSCPWMGLRAVE*ARSLIPCEHLS
Trigger: TGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAGCCCCATCCAAGGGCAAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 72 bp ACCTCCCTCCCTAGTTCCTCGGATCCCTGTGGAGTCTaGTTTGGGGCCGGGTTTCTCAAGTTTCTCTTTTTC +
Preference number: 3 (lower is better)
Translates to: TSLPSSSDPCGV*FGAGFLKFLFF
Trigger: GAAAAAGAGAAACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAACTAGGGAGGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CCA 72 bp ACAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTaGTTTTGTTGTACCCAACGCCGTGGGTCAACGGGA +
Preference number: 3 (lower is better)
Translates to: TANGALGCNSDG*FCCTQRRGSTG
Trigger: TCCCGTTGACCCACGGCGTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CCA 72 bp GCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTTaGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCC +
Preference number: 3 (lower is better)
Translates to: AKRQAAGQQMVL*GVTPMAGFVVP
Trigger: GGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CCA 72 bp TTTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTaGACAGCAAATGGTGCTTTGGGGTGTAACTCCGAT +
Preference number: 3 (lower is better)
Translates to: FSEGGLGQTTGS*TANGALGCNSD
Trigger: ATCGGAGTTACACCCCAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATACAGCAAATGGTGCTTaGGGGTGTAACTCCGATGGC +
Preference number: 3 (lower is better)
Translates to: SLYREGERSTFSSVQPRHTANGA*GCNSDG
Trigger: GCCATCGGAGTTACACCCCAAAGCACCATTTGCTGT...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACCCTGTGGAGTCTGCTTaGGGGCCGGGTTTCTCAAGT +
Preference number: 3 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNPVESA*GPGFSS
Trigger: ACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGG...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGAAGTCCCCATTTACATaGTACCATCACGAACAGTTT +
Preference number: 3 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKKSPFT*YHHEQF
Trigger: AAACTGTTCGTGATGGTACAATGTAAATGGGGACTT...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCGGTGCCCCTCGACTTaGACTTCGAACTCTCAAATA +
Preference number: 3 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCRCPST*TSNSQI
Trigger: TATTTGAGAGTTCGAAGTCAAAGTCGAGGGGCACCG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGATGAACTTTCCAGGTaGCACGGAGAAGATTCTGAG +
Preference number: 3 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLDELSR*HGEDSE
Trigger: CTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCATC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTCTCCGATGGCTGGTTTaGTTGTACCCAACGCCGTGG +
Preference number: 3 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSLRWLV*LYPTPW
Trigger: CCACGGCGTTGGGTACAACAAAACCAGCCATCGGAG...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGAGTCCTGGGGTTGCATTaGCACACACTGTTAATGAAT +
Preference number: 3 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRVLGLH*HTLLMN
Trigger: ATTCATTAACAGTGTGTGCAAATGCAACCCCAGGAC...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCGATGAACTTTCCAGGTaGCACGGAGAAGATTCTGAG +
Preference number: 3 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCDELSR*HGEDSE
Trigger: CTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCATC...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGCGTGCACCAGCGTGCACGGGGTaGAGCGTCTTTACTTTCTTG +
Preference number: 3 (lower is better)
Translates to: DYGFETQIQTHPPSAPRAPACTG*SVFTFL
Trigger: CAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGG...TGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR TCA 72 bp CAGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTaGGCATCTATCAGAACAATAATGTGTCCTGGGGTT +
Preference number: 3 (lower is better)
Translates to: QSRGVGEKLDSL*ASIRTIMCPGV
Trigger: AACCCCAGGACACATTATTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 72 bp GCTCCCAGCTGTTTCCAGATGGTGTTTGTTGAGCTGTaGCTCTGTCGAGGACAAGTCTATAACGAGGCACAC +
Preference number: 3 (lower is better)
Translates to: APSCFQMVFVEL*LCRGQVYNEAH
Trigger: GTGTGCCTCGTTATAGACTTGTCCTCGACAGAGTCACAGCTCAACAAACACCATCTGGAAACAGCTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR GCA 72 bp CGGATTCGAGACACAAATTCAAACACATCCACCTTCTaGTCCGCGTGCATCATGGCCATCATGGCATCGATC +
Preference number: 3 (lower is better)
Translates to: RIRDTNSNTSTF*SACIMAIMASI
Trigger: GATCGATGCCATGATGGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR CAA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATCTTTGTGTTAGTATCTaGCAGAGGCACACTTCGCAT +
Preference number: 3 (lower is better)
Translates to: SLYREGERSTFSSVQPRHLCVSI*QRHTSH
Trigger: ATGCGAAGTGTGCCTCTGCAAGATACTAACACAAAG...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCAAGTCCCCATTTACATaGTACCATCACGAACAGTTT +
Preference number: 3 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAKSPFT*YHHEQF
Trigger: AAACTGTTCGTGATGGTACAATGTAAATGGGGACTT...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTGAGTGGGCGAGAAGCTaGATTCCCTGTGAGCATCTA +
Preference number: 3 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISEWARS*IPCEHL
Trigger: TAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTC...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGTCTTCTAATCACTATTaGGCATTTGAACCCAACTGC +
Preference number: 3 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWSSNHY*AFEPNC
Trigger: GCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAGA...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATAACCATCACGAACAGTTaGCCTTCCAAAAATGCTGCT +
Preference number: 3 (lower is better)
Translates to: RGSTGPPSIYISSRSAKITITNS*PSKNAA
Trigger: AGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGGT...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGAAGTCCCCATTTACATaGTACCATCACGAACAGTTT +
Preference number: 3 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKKSPFT*YHHEQF
Trigger: AAACTGTTCGTGATGGTACAATGTAAATGGGGACTT...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGAGTTCATCTGAATGTTaGGATGGGAAGTTTTGTGTT +
Preference number: 3 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKSSSEC*DGKFCV
Trigger: AACACAAAACTTCCCATCCAAACATTCAGATGAACT...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGTCTTCTAATCACTATTaGGCATTTGAACCCAACTGC +
Preference number: 3 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLSSNHY*AFEPNC
Trigger: GCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAGA...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 72 bp GCATTTGAACCCAACTGCATGCAACAAAGGAAAGTGTaGAAGGAACAATGGTGTCGGCACTGGGCTGTTTGG +
Preference number: 3 (lower is better)
Translates to: AFEPNCMQQRKV*KEQWCRHWAVW
Trigger: CCAAACAGCCCAGTGCCGACACCATTGTTCCTTTCACACTTTCCTTTGTTGCATGCAGTTGGGTTCAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 72 bp CCCCGTAGAGGTAGTACTCGAGTAAGGCTTGGTAGATaGACGTGTACTGCATATCCGTTTGAACCATCTGAG +
Preference number: 3 (lower is better)
Translates to: PRRGSTRVRLGR*TCTAYPFEPSE
Trigger: CTCAGATGGTTCAAACGGATATGCAGTACACGTTCATCTACCAAGCCTTACTCGAGTACTACCTCTACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR GCA 72 bp TCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTaGCCCTCGACTTTGACTTCGAACTCTCAAATAAAT +
Preference number: 3 (lower is better)
Translates to: SDRGLLDMNQSR*PSTLTSNSQIN
Trigger: ATTTATTTGAGAGTTCGAAGTCAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 72 bp GACACAAATTCAAACACATCCACCTTCTGCTCCGCGTaGATCATGGCCATCATGGCATCGATCACAATGAAG +
Preference number: 3 (lower is better)
Translates to: DTNSNTSTFCSA*IMAIMASITMK
Trigger: CTTCATTGTGATCGATGCCATGATGGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR CAA 90 bp GCACCATATGTGGTCTCTGAAGTCGTAAACTCTTCACAGCTTGAAATACATCTAGTCTTCTTGCCAGCTTaGCCTCCACTCCTCCCACAC +
Preference number: 3 (lower is better)
Translates to: APYVVSEVVNSSQLEIHLVFLPA*PPLLPH
Trigger: GTGTGGGAGGAGTGGAGGCAAAGCTGGCAAGAAGAC...TAGATGTATTTCAAGCTGTGAAGAGTTTACGACTTCAGAGACCACATATGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATAGTAGTCTGTGTATTCTaGACCCCTTTTCATGGAAAG +
Preference number: 3 (lower is better)
Translates to: RGSTGPPSIYISSRSAKIVVCVF*TPFHGK
Trigger: CTTTCCATGAAAAGGGGTCAAGAATACACAGACTAC...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGCTTTGTGTTAGTATCTaGCAGAGGCACACTTCGCAT +
Preference number: 3 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMLCVSI*QRHTSH
Trigger: ATGCGAAGTGTGCCTCTGCAAGATACTAACACAAAG...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 72 bp CTCAAAAAGCTCCATTTTCCTCTTCCGCCGAGATGCTaGATCATTGTACAGAGAAGGAGAGAGGAGCACGTT +
Preference number: 3 (lower is better)
Translates to: LKKLHFPLPPRC*IIVQRRREEHV
Trigger: AACGTGCTCCTCTCTCCTTCTCTGTACAATGATTCAGCATCTCGGCGGAAGAGGAAAATGGAGCTTTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 72 bp CGTAGCAAACTGGCTCTTTTTCTAGGGTTCAGGTGCTaGACAGAAGCTTACTTCCCTCTCTTCTCCTTCAGT +
Preference number: 3 (lower is better)
Translates to: RSKLALFLGFRC*TEAYFPLFSFS
Trigger: ACTGAAGGAGAAGAGAGGGAAGTAAGCTTCTGTTCAGCACCTGAACCCTAGAAAAAGAGCCAGTTTGCTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCGAAAGGATCACTCGGTaGAAGTCATCTGCAGTGCTC +
Preference number: 3 (lower is better)
Translates to: LVCILHSYSTWRETVKAVERITR*KSSAVL
Trigger: GAGCACTGCAGATGACTTCAACCGAGTGATCCTTTC...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp ATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGCGTGCATAGCGTCTTTACTTTCTaGAGGAACTTCAGCATCCCA +
Preference number: 3 (lower is better)
Translates to: ITDSRHKFKHIHLLLRVHSVFTF*RNFSIP
Trigger: TGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGCT...ATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR-3UTR CAA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAACGATGGCTGGTTTTGTaGTACCCAACGCCGTGGGTC +
Preference number: 3 (lower is better)
Translates to: DIFLFILCTSARYLMAIERWLVL*YPTPWV
Trigger: GACCCACGGCGTTGGGTACAACAAAACCAGCCATCG...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACAGTTCATCTGAATGTTaGGATGGGAAGTTTTGTGTT +
Preference number: 3 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDSSSEC*DGKFCV
Trigger: AACACAAAACTTCCCATCCAAACATTCAGATGAACT...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 72 bp GAAATAGTCCTTCTGTCGGTAGCCGTCTATGAAGGATaGGTTGATGTAGTCTGTGTATTCTTGACCCCTTTT +
Preference number: 3 (lower is better)
Translates to: EIVLLSVAVYEG*VDVVCVFLTPF
Trigger: AAAAGGGGTCAAGAATACACAGACTACATCAACGCATCCTTCATAGACGGCTACCGACAGAAGGACTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTGTCCTGGGGTTGCATTaGCACACACTGTTAATGAAT +
Preference number: 3 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPVLGLH*HTLLMN
Trigger: ATTCATTAACAGTGTGTGCAAATGCAACCCCAGGAC...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGGTTTCCAGATGGTGTTaGTTGAGCTGTGACTCTGTC +
Preference number: 3 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLVSRWC*LSCDSV
Trigger: GACAGAGTCACAGCTCAACAAACACCATCTGGAAAC...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTACTCGCTCCAAAATGTaGCTGAGGGCTATGAATGTA +
Preference number: 3 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPTRSKM*LRAMNV
Trigger: TACATTCATAGCCCTCAGCAACATTTTGGAGCGAGT...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR GCA 72 bp GAAGTCCCCATTTACATTGTACCATCACGAACAGTTTaGCTTCCAAAAATGCTGCTGTTCAGGGTTGTGAAT +
Preference number: 3 (lower is better)
Translates to: EVPIYIVPSRTV*LPKMLLFRVVN
Trigger: ATTCACAACCCTGAACAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGGTACAATGTAAATGGGGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR GCA 72 bp TCTACTGTTTCTATCCTAATGTGTGCTCCTCTGTACTaGGTGTGTAAGACGCTCAGTTCATCTGAATGTTTG +
Preference number: 3 (lower is better)
Translates to: STVSILMCAPLY*VCKTLSSSECL
Trigger: CAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCACACATTAGGATAGAAACAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR TCA 72 bp ATTCTTTATCTCAATCGTTATTTCTCCATGAGTAACTaGGCCCTCGGTTGGCCAATACTGGTAGCATTTATC +
Preference number: 3 (lower is better)
Translates to: ILYLNRYFSMSN*ALGWPILVAFI
Trigger: GATAAATGCTACCAGTATTGGCCAACCGAGGGCTCAGTTACTCATGGAGAAATAACGATTGAGATAAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR-3UTR CAA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATAGTTCATCTGAATGTTaGGATGGGAAGTTTTGTGTT +
Preference number: 3 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNSSSEC*DGKFCV
Trigger: AACACAAAACTTCCCATCCAAACATTCAGATGAACT...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR-3UTR CAA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCATCACTATTTGGCATTaGAACCCAACTGCATGCAAC +
Preference number: 3 (lower is better)
Translates to: PFKTLVCILHSYSTWRETITIWH*NPTACN
Trigger: GTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGAT...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAAGGTGAAGTGCAGCTGTaGGACCAGCCTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEGEVQL*DQPGGF
Trigger: AAAGCCCCCAGGCTGGTCTCACAGCTGCACTTCACC...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGCCAGCCTGGGGGCTTTaGAGCCGTCGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKPAWGL*SRRGAV
Trigger: CACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGG...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAAGTGCCGTGCATGGTCTaGAGGTGCTTCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEVPCMV*RCFSRE
Trigger: CTCCCTGGAGAAGCACCTGCAGACCATGCACGGCAC...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGGACGCGCAGAGGCCGTaGGTTCCTGAAGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKDAQRP*VPEAAR
Trigger: GCGAGCGGCTTCAGGAACCCACGGCCTCTGCGCGTC...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254667.8
CDS-3UTR CCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAAGCCGTCGGGGAGCTGTaGCTGTATGCAGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEAVGEL*LYAELP
Trigger: CGGAAGTTCTGCATACAGCCACAGCTCCCCGACGGC...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAATTCCTCGGATCCCTGTaGAGTCTGCTTTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEFLGSL*SLLWGR
Trigger: CCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAA...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGAGGCCGTGGGTTCCTaGAGCCGCTCGCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKEAVGS*SRSRRL
Trigger: GAGCCGGCGCGAGCGGCTTCAGGAACCCACGGCCTC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254667.8
CDS-3UTR TCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTCCTGTTGCTCATGGCTaGGCCGCGCTAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAPVAHG*AALRPG
Trigger: GCCAGGCCTTAGCGCGGCTCAGCCATGAGCAACAGG...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306042.9
CDS-3UTR GCA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTGCTCGGGGAGACCCTaGTGCAGCAGGCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VACLLLLLLHGCDEVNHACSGRP*CSRPAP
Trigger: GGGAGCAGGCCTGCTGCAGCAGGGTCTCCCCGAGCA...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTGCTGTGAGACCAGCCTaGGGGCTTTGCAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAAVRPA*GLCSRR
Trigger: CCGACGGCTGCAAAGCCCCCAGGCTGGTCTCACAGC...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAATGGTGGTGCCGTGCATaGTCTGCAGGTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEWWCRA*SAGASP
Trigger: TGGAGAAGCACCTGCAGACCATGCACGGCACCACCA...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAATGTCGAAGTGGGTGGTaGTGCCGTGCATGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGECRSGW*CRAWSA
Trigger: TGCAGACCATGCACGGCACCACCACCCACTTCGACA...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGCAGCCCAGGCCGCTGTaGCAGAACGGGAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKQPRPL*QNGRGE
Trigger: TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTG...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCTGGTCTCGTTGCCCCTaGGAGCCCTGGCGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAWSRCP*EPWRAA
Trigger: TGCCGCTCGCCAGGGCTCTCAGGGGCAACGAGACCA...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254667.8
CDS-3UTR TCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGGGCCAGCCGTGGAAGTaGAACTGGCGCACTACTCGG +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKGQPWK*NWRTTR
Trigger: CCGAGTAGTGCGCCAGTTTCACTTCCACGGCTGGCC...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTGATTCCCCCAGCGTaGGGTGCTCCAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCALIPPA*GAPRPR
Trigger: CCTGGGCCTTGGAGCACCTCACGCTGGGGGAATCAA...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTTGATTCCCCCAGCGTaGGGTGCTCCAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKLIPPA*GAPRPR
Trigger: CCTGGGCCTTGGAGCACCTCACGCTGGGGGAATCAA...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGTTTCCCCAGCCTGGGGGCTTTaGAGCCGTCGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: DGVVDQNHAVLHAHPDVSPAWGL*SRRGAV
Trigger: CACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGG...GGAAACATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAACGAAGTGGGTGGTGGTaGCGTGCATGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKRSGWW*RAWSAG
Trigger: ACCTGCAGACCATGCACGGCACCACCACCCACTTCG...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAGAAATCAGCCTCGGCTaGCCTCCCGCATCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKEISLG*PPASAS
Trigger: GCTTGCAGATGCGGGAGGGCAGCCGAGGCTGATTTC...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAATGCACGGTGATGGGGTaGTTGCCTGTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKCTVMG*LPVCCC
Trigger: GCAGCAGCAGACAGGCAACCACCCCATCACCGTGCA...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 72 bp TGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTaGCCCTCGGCGGGAATCCCGATCTCAGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: CFCTAAMRSIMP*PSAGIPISGQP
Trigger: CGGCTGGCCTGAGATCGGGATTCCCGCCGAGGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CAA 72 bp CTGGTGAAGTGCAGCTGTGAGACCAGCCTGGGGGCTTaGCAGCCGTCGGGGAGCTGTGGCTGTATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LVKCSCETSLGA*QPSGSCGCMQN
Trigger: GTTCTGCATACAGCCACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGGTCTCACAGCTGCACTTCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGGCATCGATCACAATaGAGGTGCCCGTCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKWHRSQ*RCPSGP
Trigger: TGGGCCGGACGGGCACCTTCATTGTGATCGATGCCA...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGACCAGCCTGGGGGCTTTaGAGCCGTCGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRPAWGL*SRRGAV
Trigger: CACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGG...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTTGCCTGTCTGCTGCTaGTGCTTCTGCACGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKLPVCC*CFCTAA
Trigger: CGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAA...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTTGCCCTCGGCTCCGGCACTGCAGTaGACGGTGATGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CCCCFCTAAMRSIMPLPSAPALQ*TVMGWL
Trigger: CAACCACCCCATCACCGTGCACTGCAGTGCCGGAGC...CGAGGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp TGGGTGGCAGACCAGTGTCCTGACTCTACCCTAGGCCCATTTCTTGTCCTCCTCGCTGTGAGACCAGCCTaGGGGCTTTGCAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: WVADQCPDSTLGPFLVLLAVRPA*GLCSRR
Trigger: CCGACGGCTGCAAAGCCCCCAGGCTGGTCTCACAGC...GAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGTGGTGGTGCCGTGCATaGTCTGCAGGTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQWWCRA*SAGASP
Trigger: TGGAGAAGCACCTGCAGACCATGCACGGCACCACCA...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAATGTCGAAGTGGGTGGTaGTGCCGTGCATGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKCRSGW*CRAWSA
Trigger: TGCAGACCATGCACGGCACCACCACCCACTTCGACA...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGCAGCCCAGGCCGCTGTaGCAGAACGGGAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWQPRPL*QNGRGE
Trigger: TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTG...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGCCTGCAGTGGACACCTaGGGTTGGTCTAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQPAVDT*GWSKGT
Trigger: TGTCCCCTTAGACCAACCCCAGGTGTCCACTGCAGG...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp ATGGGGTGGTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCACCCTCTCCCATGACCTaGGTGGCAGACCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: MGWLPVCCCCFCTAAMRSPSPMT*VADQCP
Trigger: AGGACACTGGTCTGCCACCCAGGTCATGGGAGAGGG...TGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp ATGGGGTGGTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAAGTCGTCGGCGGATCTaGTACGGATCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MGWLPVCCCCFCTAAMRSSRRRI*YGSPPP
Trigger: TGGAGGAGGAGATCCGTATCAGATCCGCCGACGACT...TGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp TGGGTGGCAGACCAGTGTCCTGACTCTACCCTAGGCCCATTTCTTGTCCTCCTCGGCCAGCCGTGGAAGTaGAACTGGCGCACTACTCGG +
Preference number: 4 (lower is better)
Translates to: WVADQCPDSTLGPFLVLLGQPWK*NWRTTR
Trigger: CCGAGTAGTGCGCCAGTTTCACTTCCACGGCTGGCC...GAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAATCTCCTCCTCCAGGTaGTCCACGGGGATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKISSSR*STGMGK
Trigger: TTTTCCCATCCCCGTGGAGCACCTGGAGGAGGAGAT...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAAATGGTCGCAGACTTTTaGTCCCAGACCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEMVADF*SQTILQ
Trigger: CTGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCAT...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCAGCCTGGGGGCTTTaGAGCCGTCGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCPAWGL*SRRGAV
Trigger: CACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGACCTTCTGCTCCGCGTaGATCATGGCCATCATGGCA +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQTFCSA*IMAIMA
Trigger: TGCCATGATGGCCATGATGCACGCGGAGCAGAAGGT...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATCGCACTACTCGGACCTaGTCCTCCTGGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHRTTRT*SSWRAW
Trigger: CCAGGCCCGCCAGGAGGAGCAGGTCCGAGTAGTGCG...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTGGTCAATCATGCCTTTaGCCTCGGCGGGAATCCCGA +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAGQSCL*PRRESR
Trigger: TCGGGATTCCCGCCGAGGGCAAAGGCATGATTGACC...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAAATAGGGGACGAACACTaGAACATGAGGGTGCGATCA +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEIGDEH*NMRVRS
Trigger: TGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTAT...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGTCCCCCAGCGTGAGGTaGTCCAAGGCCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKSPSVR*SKAQEI
Trigger: GATCTCCTGGGCCTTGGAGCACCTCACGCTGGGGGA...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGTCTTGTCGAAGTGGGTaGTGGTGCCGTGCATGGTCT +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQSCRSG*WCRAWS
Trigger: AGACCATGCACGGCACCACCACCCACTTCGACAAGA...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGAGTCTTGCCCTTGGATaGGGCTCAGAGCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKSLALG*GSEPWS
Trigger: ACTCCACGGCTCTGAGCCCCATCCAAGGGCAAGACT...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAGGAGATCCTGTGATCTaGGGCCTTGGTAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKGDPVI*GLGRGH
Trigger: ATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCC...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCCTGAGTTCACCTGCATaGCCTCGGCTGGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VACLLLLLLHGCDEVNHALSSPA*PRLGGS
Trigger: TGAGCCACCCAGCCGAGGCCATGCAGGTGAACTCAG...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCAGTCGGGCCAGCTGGTaGAGTGCAGCTGTGAGACCA +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKASRASW*SAAVRP
Trigger: TGGTCTCACAGCTGCACTTCACCAGCTGGCCCGACT...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GGATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGTTTCTGGCATCGATCACAATaGAGGTGCCCGTCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GWCSRPKPRSPPRTPGCFWHRSQ*RCPSGP
Trigger: TGGGCCGGACGGGCACCTTCATTGTGATCGATGCCA...GAAACATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGTGGCGGGCCTGGGGCTaGTTGAGAGTGACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKWRAWG*LRVTRK
Trigger: CTTTCTGGTCACTCTCAATCAGCCCCAGGCCCGCCA...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGGCCAGCCGTGGAAGTaGAACTGGCGCACTACTCGG +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKGQPWK*NWRTTR
Trigger: CCGAGTAGTGCGCCAGTTTCACTTCCACGGCTGGCC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCCACTGCAGTGCACGGTaGTGGGGTGGTTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAHCSAR*WGGCLS
Trigger: AGACAGGCAACCACCCCATCACCGTGCACTGCAGTG...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTTTCCCACTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTGCATGTGGGGCAGACCAGTGTCCTaGCTCTACCCTAGGCCCATT +
Preference number: 4 (lower is better)
Translates to: FFPLGEPPDSHSPAHCMWGRPVS*LYPRPI
Trigger: AATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCC...CCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TGGGTGGCAGACCAGTGTCCTGACTCTACCCTAGGCCCATTTCTTGTCCTCCTCACGATGGGCCCAGCGTaGACGGGGTTGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: WVADQCPDSTLGPFLVLLTMGPA*TGLSVF
Trigger: AAAGACGCTCAACCCCGTGCACGCTGGGCCCATCGT...GAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGACCTTCTGCTCCGCGTaGATCATGGCCATCATGGCA +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKTFCSA*IMAIMA
Trigger: TGCCATGATGGCCATGATGCACGCGGAGCAGAAGGT...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCGTGCCGTGCATGGTCTaGAGGTGCTTCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAVPCMV*RCFSRE
Trigger: CTCCCTGGAGAAGCACCTGCAGACCATGCACGGCAC...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp ATGGGGTGGTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAGGCCTTCTTCATGTTTaGCGGCAAGTTGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: MGWLPVCCCCFCTAAMRSGLLHV*RQVARP
Trigger: AGGACGGGCAACTTGCCGGCAAACATGAAGAAGGCC...TGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTTGCCCTCGTCCTGCTCTCTCTCCTaGACCTCCGTCAGCATCACG +
Preference number: 4 (lower is better)
Translates to: CCCCFCTAAMRSIMPLPSSCSLS*TSVSIT
Trigger: CGTGATGCTGACGGAGGTGCAGGAGAGAGAGCAGGA...CGAGGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTATGGTTGCCTGTCTGCTaGTGCTGCTTCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVWLPVC*CCFCTA
Trigger: AGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCA...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTTGCCCTCGGTGGCCCTGTCTTCTTaGCAGCTTTGCCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: CCCCFCTAAMRSIMPLPSVALSS*QLCLHS
Trigger: GGAGTGGAGGCAAAGCTGGCAAGAAGACAGGGCCAC...CGAGGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTTGCCCTCGCACTCCCCTGCCCACTaGATGTGGCCCTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: CCCCFCTAAMRSIMPLPSHSPAH*MWPCLL
Trigger: AAGAAGACAGGGCCACATGCAGTGGGCAGGGGAGTG...CGAGGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGTTTCGTCCTTCCAGCTaGGCACCAAGTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQFRPSS*APSLAL
Trigger: AAGGGCAAGACTTGGTGCCCAGCTGGAAGGACGAAA...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGCCATGCAGGACTGTCTaGGTCAGCTGGTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKPCRTV*VSWCFT
Trigger: TGTGAAGCACCAGCTGACCCAGACAGTCCTGCATGG...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTATCTTGTCGCTGGTGCTaGCCACAGCTTTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVSCRWC*PQLSSA
Trigger: AGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGA...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGGTGAAGTGCAGCTGTaGGACCAGCCTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKGEVQL*DQPGGF
Trigger: AAAGCCCCCAGGCTGGTCTCACAGCTGCACTTCACC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp ATGGGCCCAGCGTGCACGGGGTTGAGCGTCTTTACTTTCTTGAGGAACTTCAGCAGTCGGGCCAGCTGGTaGAGTGCAGCTGTGAGACCA +
Preference number: 4 (lower is better)
Translates to: MGPACTGLSVFTFLRNFSSRASW*SAAVRP
Trigger: TGGTCTCACAGCTGCACTTCACCAGCTGGCCCGACT...GCTGAAGTTCCTCAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGGGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCGCCCCTGGGTGGCGATaGAATAGTCCTTCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAAPGWR*NSPSVG
Trigger: ACCGACAGAAGGACTATTTCATCGCCACCCAGGGGC...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAAATCGTTATTTCTCCATaGGTAACTGAGCCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEIVISP*VTEPSV
Trigger: AACCGAGGGCTCAGTTACTCATGGAGAAATAACGAT...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGACACTGCAGTGCACGGTaGTGGGGTGGTTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRHCSAR*WGGCLS
Trigger: AGACAGGCAACCACCCCATCACCGTGCACTGCAGTG...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGAGTCCCTCAGGGATTaGTTCCCCCAGCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKESLRD*FPQREV
Trigger: CACCTCACGCTGGGGGAATCAATCCCTGAGGGACTC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGAGAGTCCCTCAGGGATTaGTTCCCCCAGCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRESLRD*FPQREV
Trigger: CACCTCACGCTGGGGGAATCAATCCCTGAGGGACTC...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp ATGGGGTGGTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAAGCAGCATCACCCTTTaGTGCTCTTGCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: MGWLPVCCCCFCTAAMRSSSITL*CSCSSK
Trigger: CTTGGAGGAGCAAGAGCAGCAAAGGGTGATGCTGCT...TGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGGCCAGCTGGTGAAGTaGAGCTGTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKGQLVK*SCETSL
Trigger: CAGGCTGGTCTCACAGCTGCACTTCACCAGCTGGCC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTACGATGGGCCCAGCGTaGACGGGGTTGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLTMGPA*TGLSVF
Trigger: AAAGACGCTCAACCCCGTGCACGCTGGGCCCATCGT...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTTCCGGATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATACCTTCTGCTCCGCGTaGATCATGGCCATCATGGCA +
Preference number: 4 (lower is better)
Translates to: LPDGVVDQNHAVLHAHPDTFCSA*IMAIMA
Trigger: TGCCATGATGGCCATGATGCACGCGGAGCAGAAGGT...ATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCTCCTGCTCTCTCTCCTaGACCTCCGTCAGCATCACG +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKASCSLS*TSVSIT
Trigger: CGTGATGCTGACGGAGGTGCAGGAGAGAGAGCAGGA...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGTTGCCTGTCTGCTGCTaGTGCTTCTGCACGGCTGCG +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLLPVCC*CFCTAA
Trigger: CGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAA...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGTGTGCTCCTCTGTACTaGGTGTGTAAGACGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQCAPLY*VCKTLS
Trigger: ACTGAGCGTCTTACACACGCAGTACAGAGGAGCACA...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAATAGGGGACGAACACTaGAACATGAGGGTGCGATCA +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKIGDEH*NMRVRS
Trigger: TGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTAT...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGAAAAGCTACTCCTGTTaGTCATGGCTGAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKKSYSC*SWLSRA
Trigger: AGCGCGGCTCAGCCATGAGCAACAGGAGTAGCTTTT...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGTCAGCTGAGTTCACCTaGATGGCCTCGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKSAEFT*MASAGW
Trigger: CCACCCAGCCGAGGCCATGCAGGTGAACTCAGCTGA...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCGATCCCTGTGGAGTCTaGTTTGGGGCCGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKADPCGV*FGAGFL
Trigger: GAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATC...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTGGGAAAATACTTCTTaGGCCCTGAGGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAWENTS*ALRVTC
Trigger: GCAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCA...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTTCTGCTCCGCGTGCATCATGGCCATCATGGCATCGATCACAATGAAGGTGCCGCCGTCGGGGAGCTGTaGCTGTATGCAGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: LLLRVHHGHHGIDHNEGAAVGEL*LYAELP
Trigger: CGGAAGTTCTGCATACAGCCACAGCTCCCCGACGGC...GGCACCTTCATTGTGATCGATGCCATGATGGCCATGATGCACGCGGAGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAGCTCCGCGTGCATCATaGCCATCATGGCATCGATCA +
Preference number: 4 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVAPRAS*PSWHRS
Trigger: TGATCGATGCCATGATGGCCATGATGCACGCGGAGC...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTTTCCCACTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTGCATGTGGTCTTGTCGAAGTGGGTaGTGGTGCCGTGCATGGTCT +
Preference number: 4 (lower is better)
Translates to: FFPLGEPPDSHSPAHCMWSCRSG*WCRAWS
Trigger: AGACCATGCACGGCACCACCACCCACTTCGACAAGA...CCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGCTCAGAGCCGTGGAGTaGGCGAGAAGCTTGATTCCC +
Preference number: 4 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKLRAVE*ARSLIP
Trigger: GGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAG...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCGCTGTCCCGGACAGTaGAGGGGAGAGTCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCRCPGQ*RGESCV
Trigger: GACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTTGCCCTCGCAATGGTGTCGGCACTaGGCTGTTTGGGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: CCCCFCTAAMRSIMPLPSQWCRH*AVWGLF
Trigger: AAACAGCCCCCAAACAGCCCAGTGCCGACACCATTG...CGAGGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGTTTCCTACTCCTGTTGCTCATaGCTGAGCCGCGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: DGVVDQNHAVLHAHPDVSYSCCS*LSRAKA
Trigger: GGCCTTAGCGCGGCTCAGCCATGAGCAACAGGAGTA...GGAAACATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACCTGCATGGCCTCGGCTaGGTGGCTCAGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDLHGLG*VAQAPL
Trigger: CAGAGGGGCCTGAGCCACCCAGCCGAGGCCATGCAG...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGCACATGGACCGAAACTaGGAACTTTACAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQHMDRN*ELYRSP
Trigger: GGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTG...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTGGGAAGTTTTGTGTTaGGCCTCCAGGCATAGCACT +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAWEVLC*ASRHST
Trigger: AGTGCTATGCCTGGAGGCTCAACACAAAACTTCCCA...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp ATGGGGTGGTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAAGTGGGCGAGAAGCTTaGTTCCCTGTGAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: MGWLPVCCCCFCTAAMRSSGREA*FPVSIY
Trigger: ATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACT...TGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTCTAGGGTTCAGGTGCTaGACAGAAGCTTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCALGFRC*TEAYFP
Trigger: AGGGAAGTAAGCTTCTGTTCAGCACCTGAACCCTAG...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAGGGCTTCAAGGATTCTaGCAGAGGGCTCCTAGACAT +
Preference number: 4 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVGLQGF*QRAPRH
Trigger: ATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCC...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGCTTTTTCCCACTTGGTaGGCCTCCCGATTCCCACTC +
Preference number: 4 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWLFPTW*ASRFPL
Trigger: GAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAAG...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATGGCCAGCTGGTGAAGTaGAGCTGTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHGQLVK*SCETSL
Trigger: CAGGCTGGTCTCACAGCTGCACTTCACCAGCTGGCC...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TTCCTCGGATCCCTGTGGAGTCTGCTTTGGGGCCGGGTTTCTCAAGTTTCTCTTCGAAGTGGGTGGTGGTaGCGTGCATGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FLGSLWSLLWGRVSQVSLRSGWW*RAWSAG
Trigger: ACCTGCAGACCATGCACGGCACCACCACCCACTTCG...AAGAGAAACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCCTTCTTCATGTTTaGCGGCAAGTTGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKGLLHV*RQVARP
Trigger: AGGACGGGCAACTTGCCGGCAAACATGAAGAAGGCC...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTATAGGGGACGAACACTaGAACATGAGGGTGCGATCA +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAIGDEH*NMRVRS
Trigger: TGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTAT...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGCTGGGCACCAAGTCTTaGCCTTGGATGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLLGTKS*PWMGLR
Trigger: TCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAG...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCGCCGTCGGGGAGCTGTaGCTGTATGCAGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCAVGEL*LYAELP
Trigger: CGGAAGTTCTGCATACAGCCACAGCTCCCCGACGGC...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCCGATCTTGTCGAAGTaGGTGGTGGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLPILSK*VVVPCM
Trigger: CATGCACGGCACCACCACCCACTTCGACAAGATCGG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTCCTCGGATCCCTGTGGAGTCTGCTTTGGGGCCGGGTTTCTCAAGTTTCTCTTTGCACGGTGATGGGGTaGTTGCCTGTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLGSLWSLLWGRVSQVSLCTVMG*LPVCCC
Trigger: GCAGCAGCAGACAGGCAACCACCCCATCACCGTGCA...AAGAGAAACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCAGAACCCCTGCAGTaGACACCTGGGGTTGGTCTA +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKAEPLQ*TPGVGL
Trigger: TAGACCAACCCCAGGTGTCCACTGCAGGGGTTCTGC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAAAGCCGCGCTAAGGCCTaGCCTCTGTGTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQSRAKA*PLCVSQ
Trigger: CTGGGAGACACACAGAGGCCAGGCCTTAGCGCGGCT...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306042.9
CDS-3UTR CCA 90 bp TTTTTCCCACTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTGCATGTGGGGGGTAAGCGGTCAATaGCTTCTCCAGGATGAAAGC +
Preference number: 4 (lower is better)
Translates to: FFPLGEPPDSHSPAHCMWGVSGQ*LLQDES
Trigger: GCTTTCATCCTGGAGAAGCCATTGACCGCTTACCCC...CCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTTTCCCACTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTGCATGTGGCATTTGTCAATTTCCTaGACTCCTCCTCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: FFPLGEPPDSHSPAHCMWHLSIS*TPPPAR
Trigger: TCGGGCTGGAGGAGGAGTTCAGGAAATTGACAAATG...CCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGGACGCTCAGTTCATCTaGATGTTTGGATGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQDAQFI*MFGWEV
Trigger: AACTTCCCATCCAAACATTCAGATGAACTGAGCGTC...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTTTCCCACTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTGCATGTGGGATGTCTCCAAATGCTaGAACACAGGTGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FFPLGEPPDSHSPAHCMWDVSKC*NTGVRL
Trigger: GAGCCTGACACCTGTGTTTCAGCATTTGGAGACATC...CCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACTGTGAAGCCCTCCCCTaGAATCAGCCTCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNCEALP*NQPRLP
Trigger: GGGCAGCCGAGGCTGATTTCAGGGGAGGGCTTCACA...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATCGTGGTTGTCTCGTTaGTGTCGGCAGTGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRSWLSR*CRQWSR
Trigger: ACGAGACCACTGCCGACAGCAACGAGACAACCACGA...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254667.8
CDS-3UTR GCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGAACTCCTCCCGAAACTaGTTGCAGTCGTCGGCGGAT +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKNSSRN*LQSSAD
Trigger: ATCCGCCGACGACTGCAAGCAGTTTCGGGAGGAGTT...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGAGCTGTGGCTGTATaGAGAACTTCCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKGAVAV*RTSGWC
Trigger: ACACCATCCGGAAGTTCTGCATACAGCCACAGCTCC...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGGGAGCTGTGGCTGTATaGAGAACTTCCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWGAVAV*RTSGWC
Trigger: ACACCATCCGGAAGTTCTGCATACAGCCACAGCTCC...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGGGTGGCAGACCAGTGTCCTGACTCTACCCTAGGCCCATTTCTTGTCCTCCTCGGAGCTGTGGCTGTATaGAGAACTTCCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: WVADQCPDSTLGPFLVLLGAVAV*RTSGWC
Trigger: ACACCATCCGGAAGTTCTGCATACAGCCACAGCTCC...GAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp ATGGGCCCAGCGTGCACGGGGTTGAGCGTCTTTACTTTCTTGAGGAACTTCAGCAACACATCCACCTTCTaGTCCGCGTGCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: MGPACTGLSVFTFLRNFSNTSTF*SACIMA
Trigger: GGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTT...GCTGAAGTTCCTCAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGGGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTCGCACTACTCGGACCTaGTCCTCCTGGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSRTTRT*SSWRAW
Trigger: CCAGGCCCGCCAGGAGGAGCAGGTCCGAGTAGTGCG...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCCGCACTACTCGGACCTaGTCCTCCTGGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDARTTRT*SSWRAW
Trigger: CCAGGCCCGCCAGGAGGAGCAGGTCCGAGTAGTGCG...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCTGGTTGCCTGTCTGCTaGTGCTGCTTCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCWLPVC*CCFCTA
Trigger: AGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCA...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATCTGGGCACCAAGTCTTaGCCTTGGATGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHLGTKS*PWMGLR
Trigger: TCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAG...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCTGGAGGGGAGAGTCTTaGGTCCTGGGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCWRGES*VLGKVA
Trigger: AGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCA...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCACCACAGCTTTCCTCTaGTTCCTGAACCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKATTAFL*FLNQVS
Trigger: GCTCACCTGGTTCAGGAAGCAGAGGAAAGCTGTGGT...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTTGCCCGTCTGGGTCAGCTGGTaGTTCACAGGTGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VCCCCFCTAAMRSIMPLPVWVSW*FTGVFS
Trigger: AGAAAAGACACCTGTGAAGCACCAGCTGACCCAGAC...GGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTTCTTCTTGCCAGCTTTaGCTCCACTCCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLSSCQL*LHSSHT
Trigger: GGTGTGGGAGGAGTGGAGGCAAAGCTGGCAAGAAGA...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGTTTCCCCTCCAAGATTCCGTTaGGCATCTTCTTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: DGVVDQNHAVLHAHPDVSPPRFR*ASSCRW
Trigger: CCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGG...GGAAACATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CCA 90 bp GGATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGTTTCTGGGAAAATACTTCTTaGGCCCTGAGGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: GWCSRPKPRSPPRTPGCFWENTS*ALRVTC
Trigger: GCAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCA...GAAACATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGAGGTGCTCCACGGGGATaGGAAAATACTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRGAPRG*ENTSWA
Trigger: GGCCCAAGAAGTATTTTCCCATCCCCGTGGAGCACC...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTGCTCCGCGTGCATCATaGCCATCATGGCATCGATCA +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLAPRAS*PSWHRS
Trigger: TGATCGATGCCATGATGGCCATGATGCACGCGGAGC...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATCCGATCTTGTCGAAGTaGGTGGTGGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHPILSK*VVVPCM
Trigger: CATGCACGGCACCACCACCCACTTCGACAAGATCGG...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATATTGTACCCAACGCCGTaGGTCAACGGGACCACCCAG +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKILYPTP*VNGTTQ
Trigger: CTGGGTGGTCCCGTTGACCCACGGCGTTGGGTACAA...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTACAAACGACAGGCAGCTaGACAGCAAATGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVQTTGS*TANGAL
Trigger: CAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTG...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGTTTCTGAGGGTGGTCTaGGCCAAACGACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKFLRVV*AKRQAA
Trigger: AGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCTCAGAGCCGTGGAGTaGGCGAGAAGCTTGATTCCC +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCLRAVE*ARSLIP
Trigger: GGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCGTGGACACCTGGGGTTaGTCTAAGGGGACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAVDTWG*SKGTGK
Trigger: TTTTCCTGTCCCCTTAGACCAACCCCAGGTGTCCAC...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGGTGGACACCTGGGGTTaGTCTAAGGGGACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWVDTWG*SKGTGK
Trigger: TTTTCCTGTCCCCTTAGACCAACCCCAGGTGTCCAC...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAACTTCTCCTTTGTTCCTaGAATGGAAAAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: PGIALDQPRPLWQNGRGELLLCS*NGKSLG
Trigger: TCCCAAACTTTTTCCATTCCAGGAACAAAGGAGAAG...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 72 bp CCCTCCCTAGTTCCTCGGATCCCTGTGGAGTCTGCTTaGGGGCCGGGTTTCTCAAGTTTCTCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PSLVPRIPVESA*GPGFSSFSFSH
Trigger: GTGGGAAAAAGAGAAACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAACTAGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAATCCTGTTTGGGACCTTaGGCTGCTATGAATTTATTC +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKSCLGP*AAMNLF
Trigger: GAATAAATTCATAGCAGCTCAAGGTCCCAAACAGGA...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCGTAAGGCTTGGTAGATaGACGTGTACTGCATATCCG +
Preference number: 4 (lower is better)
Translates to: VACLLLLLLHGCDEVNHAVRLGR*TCTAYP
Trigger: CGGATATGCAGTACACGTTCATCTACCAAGCCTTAC...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGCATTTGTCAATTTCCTaGACTCCTCCTCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWHLSIS*TPPPAR
Trigger: TCGGGCTGGAGGAGGAGTTCAGGAAATTGACAAATG...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACTGGCGGGCCTGGGGCTaGTTGAGAGTGACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNWRAWG*LRVTRK
Trigger: CTTTCTGGTCACTCTCAATCAGCCCCAGGCCCGCCA...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGACCATATGTGGTCTCTaGAGTCGTAAACTCTTCACA +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQTICGL*SRKLFT
Trigger: TGTGAAGAGTTTACGACTTCAGAGACCACATATGGT...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGGACGCTCAGTTCATCTaGATGTTTGGATGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKDAQFI*MFGWEV
Trigger: AACTTCCCATCCAAACATTCAGATGAACTGAGCGTC...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACGAGTCCCTCAGGGATTaGTTCCCCCAGCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNESLRD*FPQREV
Trigger: CACCTCACGCTGGGGGAATCAATCCCTGAGGGACTC...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCGAAGGAAACAAGAGATaGACTTTCCAGGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: VACLLLLLLHGCDEVNHAEGNKR*TFQVAR
Trigger: CCGTGCAACCTGGAAAGTTCATCTCTTGTTTCCTTC...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGGATGTCTCCAAATGCTaGAACACAGGTGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWDVSKC*NTGVRL
Trigger: GAGCCTGACACCTGTGTTTCAGCATTTGGAGACATC...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCGTGTTTGTTGAGCTGTaGCTCTGTCGAGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAVFVEL*LCRGQV
Trigger: GACTTGTCCTCGACAGAGTCACAGCTCAACAAACAC...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGAGCAGCATCACCCTTTaGTGCTCTTGCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKSSITL*CSCSSK
Trigger: CTTGGAGGAGCAAGAGCAGCAAAGGGTGATGCTGCT...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp ATGGGCCCAGCGTGCACGGGGTTGAGCGTCTTTACTTTCTTGAGGAACTTCAGCAGCAGCATCACCCTTTaGTGCTCTTGCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: MGPACTGLSVFTFLRNFSSSITL*CSCSSK
Trigger: CTTGGAGGAGCAAGAGCAGCAAAGGGTGATGCTGCT...GCTGAAGTTCCTCAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCATCTCCTCCTCCAGGTaGTCCACGGGGATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCISSSR*STGMGK
Trigger: TTTTCCCATCCCCGTGGAGCACCTGGAGGAGGAGAT...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGGGTGGCAGACCAGTGTCCTGACTCTACCCTAGGCCCATTTCTTGTCCTCCTCATGGTCGCAGACTTTTaGTCCCAGACCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WVADQCPDSTLGPFLVLLMVADF*SQTILQ
Trigger: CTGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCAT...GAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACGGCCAGCTGGTGAAGTaGAGCTGTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDGQLVK*SCETSL
Trigger: CAGGCTGGTCTCACAGCTGCACTTCACCAGCTGGCC...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TTCCTCGGATCCCTGTGGAGTCTGCTTTGGGGCCGGGTTTCTCAAGTTTCTCTTAACACATCCACCTTCTaGTCCGCGTGCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: FLGSLWSLLWGRVSQVSLNTSTF*SACIMA
Trigger: GGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTT...AAGAGAAACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTGCTCCGGCACTGCAGTaGACGGTGATGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISAPALQ*TVMGWL
Trigger: CAACCACCCCATCACCGTGCACTGCAGTGCCGGAGC...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATCTGCCCTCCCGCATCTaGAAGCTCATATCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHLPSRI*KLISEA
Trigger: TGCTTCGGATATGAGCTTGCAGATGCGGGAGGGCAG...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCCTCCAAGATTCCGTTaGGCATCTTCTTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLPPRFR*ASSCRW
Trigger: CCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGCCTCCAAGATTCCGTTaGGCATCTTCTTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLPPRFR*ASSCRW
Trigger: CCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGG...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGCCTCCAAGATTCCGTTaGGCATCTTCTTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKPPRFR*ASSCRW
Trigger: CCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGG...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTTGGGAAAATACTTCTTaGGCCCTGAGGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLWENTS*ALRVTC
Trigger: GCAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCA...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CACATCCACCTTCTGCTCCGCGTGCATCATGGCCATCATGGCATCGATCACAATGGTGCTCCACGGGGATaGGAAAATACTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: HIHLLLRVHHGHHGIDHNGAPRG*ENTSWA
Trigger: GGCCCAAGAAGTATTTTCCCATCCCCGTGGAGCACC...ATTGTGATCGATGCCATGATGGCCATGATGCACGCGGAGCAGAAGGTGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAGCTGTGAGACCAGCCTaGGGGCTTTGCAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQAVRPA*GLCSRR
Trigger: CCGACGGCTGCAAAGCCCCCAGGCTGGTCTCACAGC...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGTTTCGTCCTTCCAGCTaGGCACCAAGTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKFRPSS*APSLAL
Trigger: AAGGGCAAGACTTGGTGCCCAGCTGGAAGGACGAAA...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCGGAATGGAAAAAGTTTaGGAACAGGCAGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: VACLLLLLLHGCDEVNHAGMEKV*EQAEPL
Trigger: CAGGGGTTCTGCCTGTTCCCAAACTTTTTCCATTCC...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGAGAGTCTTGCGTCCTaGGGAAAGTGGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLESLAS*GKWLLL
Trigger: AAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGAGAGAGTCTTGCGTCCTaGGGAAAGTGGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRESLAS*GKWLLL
Trigger: AAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTC...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATATACTCCTGTTGCTCATaGCTGAGCCGCGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKIYSCCS*LSRAKA
Trigger: GGCCTTAGCGCGGCTCAGCCATGAGCAACAGGAGTA...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306042.9
3UTR CAA 72 bp GGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTaGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACC +
Preference number: 4 (lower is better)
Translates to: GQTTGSWTANGA*GCNSDGWFCCT
Trigger: GGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTCCTGTTTGGGACCTTaGGCTGCTATGAATTTATTC +
Preference number: 4 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCASCLGP*AAMNLF
Trigger: GAATAAATTCATAGCAGCTCAAGGTCCCAAACAGGA...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATTGGTCGGGCCAGTACTaGTGGCACTTTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHWSGQY*WHFSSF
Trigger: GAAAGAGGAAAAGTGCCATCAGTACTGGCCCGACCA...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGCGTGCAGGTGAAGTGCAGCTGTaGGACCAGCCTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DYGFETQIQTHPPSAPRAGEVQL*DQPGGF
Trigger: AAAGCCCCCAGGCTGGTCTCACAGCTGCACTTCACC...TGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATCGTTATTTCTCCATaGGTAACTGAGCCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVIVISP*VTEPSV
Trigger: AACCGAGGGCTCAGTTACTCATGGAGAAATAACGAT...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTCACTGCAGTGCACGGTaGTGGGGTGGTTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISHCSAR*WGGCLS
Trigger: AGACAGGCAACCACCCCATCACCGTGCACTGCAGTG...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGACTTCCGCCGAGATGCTaGATCATTGTACAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRLPPRC*IIVQRR
Trigger: CCTTCTCTGTACAATGATTCAGCATCTCGGCGGAAG...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCTAGGGTTCAGGTGCTaGACAGAAGCTTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLLGFRC*TEAYFP
Trigger: AGGGAAGTAAGCTTCTGTTCAGCACCTGAACCCTAG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTGCACGGAGAAGATTCTaGGTCCCTCAGGGATTGATT +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLARRRF*VPQGLI
Trigger: AATCAATCCCTGAGGGACTCAGAATCTTCTCCGTGC...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGCACGGAGAAGATTCTaGGTCCCTCAGGGATTGATT +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLARRRF*VPQGLI
Trigger: AATCAATCCCTGAGGGACTCAGAATCTTCTCCGTGC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGAAAGGATCACTCGGTTaGAGTCATCTGCAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLKGSLG*SHLQCS
Trigger: CGAGCACTGCAGATGACTTCAACCGAGTGATCCTTT...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGACGATGGGCCCAGCGTaGACGGGGTTGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMTMGPA*TGLSVF
Trigger: AAAGACGCTCAACCCCGTGCACGCTGGGCCCATCGT...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTACTGCATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACAACGATGGGCCCAGCGTaGACGGGGTTGAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: CTAYPFEPSEGADYGFETTMGPA*TGLSVF
Trigger: AAAGACGCTCAACCCCGTGCACGCTGGGCCCATCGT...TGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATGCAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTTGGGTGGTGGTGCCGTaGATGGTCTGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISWVVVP*MVCRCF
Trigger: GAAGCACCTGCAGACCATGCACGGCACCACCACCCA...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGCGAAGTGGGTGGTGGTaGCGTGCATGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMRSGWW*RAWSAG
Trigger: ACCTGCAGACCATGCACGGCACCACCACCCACTTCG...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACGGTCAATCATGCCTTTaGCCTCGGCGGGAATCCCGA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNGQSCL*PRRESR
Trigger: TCGGGATTCCCGCCGAGGGCAAAGGCATGATTGACC...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTGCTCCGGCACTGCAGTaGACGGTGATGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSAPALQ*TVMGWL
Trigger: CAACCACCCCATCACCGTGCACTGCAGTGCCGGAGC...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGCACGTTCAGCAGTGTaGAGCCCAGGCATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMARSAV*SPGMQL
Trigger: CAGCTGCATGCCTGGGCTGCACACTGCTGAACGTGC...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTCCCCCAGCGTGAGGTaGTCCAAGGCCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSSPSVR*SKAQEI
Trigger: GATCTCCTGGGCCTTGGAGCACCTCACGCTGGGGGA...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCATCCCAAGTCGTGCCTaGCGCAAATCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCIPSRA*RKSPAS
Trigger: AGAAGCTGGAGATTTGCGGCAGGCACGACTTGGGAT...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTGGGGAGGCGGGCCTCTaGCCAGGCTTGGGGAGACAA +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPGEAGL*PGLGRQ
Trigger: TTGTCTCCCCAAGCCTGGGCAGAGGCCCGCCTCCCC...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCCGATTCCCACTCCCCTaGCCACTGCATGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDARFPLP*PLHVAL
Trigger: CAGGGCCACATGCAGTGGGCAGGGGAGTGGGAATCG...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTTCGGGGAGACCCTGCTaGAGCAGGCCTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPSGRPC*SRPAPS
Trigger: GCTGGGAGCAGGCCTGCTGCAGCAGGGTCTCCCCGA...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp AATTCAAACACATCCACCTTCTGCTCCGCGTGCATCATGGCCATCATGGCATCGGCTCCGCGTGCATCATaGCCATCATGGCATCGATCA +
Preference number: 4 (lower is better)
Translates to: NSNTSTFCSACIMAIMASAPRAS*PSWHRS
Trigger: TGATCGATGCCATGATGGCCATGATGCACGCGGAGC...CGATGCCATGATGGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAATCTTGTCGAAGTGGGTaGTGGTGCCGTGCATGGTCT +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQSCRSG*WCRAWS
Trigger: AGACCATGCACGGCACCACCACCCACTTCGACAAGA...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGCAACTGTATAGCAGGTaGCCTTTAAGGCATAACAAA +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQQLYSR*PLRHNK
Trigger: TTTGTTATGCCTTAAAGGCCACCTGCTATACAGTTG...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGTGTAACTCCGATGGCTaGTTTTGTTGTACCCAACGC +
Preference number: 4 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKCNSDG*FCCTQR
Trigger: GCGTTGGGTACAACAAAACCAGCCATCGGAGTTACA...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATACAGCCCAGGCCGCTGTaGCAGAACGGGAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGIQPRPL*QNGRGE
Trigger: TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTG...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCGGAATGGAAAAAGTTTaGGAACAGGCAGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAGMEKV*EQAEPL
Trigger: CAGGGGTTCTGCCTGTTCCCAAACTTTTTCCATTCC...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAACTTCTCCTTTGTTCCTaGAATGGAAAAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKLLLCS*NGKSLG
Trigger: TCCCAAACTTTTTCCATTCCAGGAACAAAGGAGAAG...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTCGCTGTCCCGGACAGTaGAGGGGAGAGTCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSRCPGQ*RGESCV
Trigger: GACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCG...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATAGGAGATCCTGTGATCTaGGGCCTTGGTAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKIGDPVI*GLGRGH
Trigger: ATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCC...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAACAATGGTGTCGGCACTaGGCTGTTTGGGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQQWCRH*AVWGLF
Trigger: AAACAGCCCCCAAACAGCCCAGTGCCGACACCATTG...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAACATTCATATAGCACATaGAGAGAAACCGTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKHSYST*RETVKA
Trigger: TGCCTTTACGGTTTCTCTCCATGTGCTATATGAATG...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTTTACACGGGATGATCTaGATGACCCTGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLLHGMI*MTLAFF
Trigger: GAAGAAGGCCAGGGTCATCCAGATCATCCCGTGTAA...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGAACTGTCTGGGTCAGCTaGTGCTTCACAGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRTVWVS*CFTGVF
Trigger: AAAGACACCTGTGAAGCACCAGCTGACCCAGACAGT...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCAGCCTTTTCCTAGGTaGTCTCAGCTGAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLQPFPR*SQLSSP
Trigger: AGGTGAACTCAGCTGAGACCACCTAGGAAAAGGCTG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCTGTGGAGTCTGCTTTaGGGCCGGGTTTCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCLWSLL*GRVSQV
Trigger: AACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAG...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
3UTR CAA 72 bp GCAGCAGGCCTGCTCCCAGCTGTTTCCAGATGGTGTTaGTTGAGCTGTGACTCTGTCGAGGACAAGTCTATA +
Preference number: 4 (lower is better)
Translates to: AAGLLPAVSRWC*LSCDSVEDKSI
Trigger: TATAGACTTGTCCTCGACAGAGTCACAGCTCAACAAACACCATCTGGAAACAGCTGGGAGCAGGCCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp GGATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGTTTCGCGTCTTTACTTTCTTaGGGAACTTCAGCATCCCAA +
Preference number: 4 (lower is better)
Translates to: GWCSRPKPRSPPRTPGCFASLLS*GTSASQ
Trigger: TTGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGC...GAAACATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGAGTAAGGCTTGGTAGATaGACGTGTACTGCATATCCG +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRVRLGR*TCTAYP
Trigger: CGGATATGCAGTACACGTTCATCTACCAAGCCTTAC...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTTTCCCACTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTGCATGTGGGAAAGTCTCGTATACTaGTGGCTTCTGAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: FFPLGEPPDSHSPAHCMWESLVY*WLLKGY
Trigger: ATACCCTTTCAGAAGCCATCAGTATACGAGACTTTC...CCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCACCATATGTGGTCTCTaGAGTCGTAAACTCTTCACA +
Preference number: 4 (lower is better)
Translates to: VACLLLLLLHGCDEVNHATICGL*SRKLFT
Trigger: TGTGAAGAGTTTACGACTTCAGAGACCACATATGGT...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATTGGGAAGTTTTGTGTTaGGCCTCCAGGCATAGCACT +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHWEVLC*ASRHST
Trigger: AGTGCTATGCCTGGAGGCTCAACACAAAACTTCCCA...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCAGTGGGCGAGAAGCTTaGTTCCCTGTGAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCSGREA*FPVSIY
Trigger: ATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACT...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATAGGGCTTCAAGGATTCTaGCAGAGGGCTCCTAGACAT +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKIGLQGF*QRAPRH
Trigger: ATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCC...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGCTTAAAGGTACTTCTTaGTACAAGAGATGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQLKGTS*YKRCQL
Trigger: TAACTGGCATCTCTTGTATCAAGAAGTACCTTTAAG...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCATGGCTTCTCCAGGATaGAAGCCTCCGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDAMASPG*KPPAPA
Trigger: GGCTGGTGCCGGAGGCTTTCATCCTGGAGAAGCCAT...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTTCGCGCAGATCGCGCTaGAGCGGAGGCTCCGCATCT +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPSRRSR*SGGSAS
Trigger: AGATGCGGAGCCTCCGCTGCAGCGCGATCTGCGCGA...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254667.8
CDS-3UTR GCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTAGCATCACCCTTTGCTaGTCTTGCTCCTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLSITLC*SCSSKI
Trigger: AATCTTGGAGGAGCAAGAGCAGCAAAGGGTGATGCT...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACATCTCCTCCTCCAGGTaGTCCACGGGGATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNISSSR*STGMGK
Trigger: TTTTCCCATCCCCGTGGAGCACCTGGAGGAGGAGAT...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTGCCTGTCTGCTGCTaGTGCTTCTGCACGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSLPVCC*CFCTAA
Trigger: CGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAA...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCCCATCACGAACAGTTTaGCTTCCAAAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAPSRTV*LPKMLL
Trigger: CAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGG...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGCTGGGCACCAAGTCTTaGCCTTGGATGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMLGTKS*PWMGLR
Trigger: TCTGAGCCCCATCCAAGGGCAAGACTTGGTGCCCAG...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGTGGAGGGGAGAGTCTTaGGTCCTGGGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMWRGES*VLGKVA
Trigger: AGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCA...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATAATATCCGAAGCAGCTTaGCTGAGACCCATGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKIISEAA*LRPMQD
Trigger: GTCCTGCATGGGTCTCAGGCAAGCTGCTTCGGATAT...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAGCCGTCGGGGAGCTGTaGCTGTATGCAGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQAVGEL*LYAELP
Trigger: CGGAAGTTCTGCATACAGCCACAGCTCCCCGACGGC...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCAAACACATGCTGTGAGACCAGCCTaGGGGCTTTGCAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: FEPSEGADYGFETQIQTHAVRPA*GLCSRR
Trigger: CCGACGGCTGCAAAGCCCCCAGGCTGGTCTCACAGC...ATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACGCTCCGCGTGCATCATaGCCATCATGGCATCGATCA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNAPRAS*PSWHRS
Trigger: TGATCGATGCCATGATGGCCATGATGCACGCGGAGC...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTCCTGCAGTGGACACCTaGGGTTGGTCTAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISPAVDT*GWSKGT
Trigger: TGTCCCCTTAGACCAACCCCAGGTGTCCACTGCAGG...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGCTTCTAATCACTATTTaGCATTTGAACCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQLLITI*HLNPTA
Trigger: TGCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAG...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAACACACAGATCAGAATaGTCGTCTTCTAATCACTAT +
Preference number: 4 (lower is better)
Translates to: KGERCPGQWRGESCVLGKTHRSE*SSSNHY
Trigger: ATAGTGATTAGAAGACGACCATTCTGATCTGTGTGT...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGTCTTGTCGCTGGTGCTaGCCACAGCTTTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMSCRWC*PQLSSA
Trigger: AGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGA...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTAGTCGTCGGCGGATCTaGTACGGATCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSSRRRI*YGSPPP
Trigger: TGGAGGAGGAGATCCGTATCAGATCCGCCGACGACT...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAAGTGTCCAGATGGCAATaGGTTGAACTCCTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQVSRWQ*VELLPK
Trigger: TTTCGGGAGGAGTTCAACTCATTGCCATCTGGACAC...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCGTCTTTACTTTCTTaGGGAACTTCAGCATCCCAA +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKASLLS*GTSASQ
Trigger: TTGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCGCCCCTGGGTGGCGATaGAATAGTCCTTCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDAAPGWR*NSPSVG
Trigger: ACCGACAGAAGGACTATTTCATCGCCACCCAGGGGC...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATACTAGGGTTCAGGTGCTaGACAGAAGCTTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKILGFRC*TEAYFP
Trigger: AGGGAAGTAAGCTTCTGTTCAGCACCTGAACCCTAG...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCCTAGGTGGTCTCAGCTaGGTTCACCTGCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDALGGLS*VHLHGL
Trigger: GAGGCCATGCAGGTGAACTCAGCTGAGACCACCTAG...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTACTGCATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACAATCTCCTCCTCCAGGTaGTCCACGGGGATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CTAYPFEPSEGADYGFETISSSR*STGMGK
Trigger: TTTTCCCATCCCCGTGGAGCACCTGGAGGAGGAGAT...TGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATGCAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp GGCGCTGATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGGGAGCTGTGGCTGTATaGAGAACTTCCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: GADYGFETQIQTHPPSAPGAVAV*RTSGWC
Trigger: ACACCATCCGGAAGTTCTGCATACAGCCACAGCTCC...CGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTACCTTCTGCTCCGCGTaGATCATGGCCATCATGGCA +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISTFCSA*IMAIMA
Trigger: TGCCATGATGGCCATGATGCACGCGGAGCAGAAGGT...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCGGTCAATCATGCCTTTaGCCTCGGCGGGAATCCCGA +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDAGQSCL*PRRESR
Trigger: TCGGGATTCCCGCCGAGGGCAAAGGCATGATTGACC...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTGGTTGCCTGTCTGCTaGTGCTGCTTCTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSWLPVC*CCFCTA
Trigger: AGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCA...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGCCATCACGAACAGTTTaGCTTCCAAAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLPSRTV*LPKMLL
Trigger: CAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGG...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTGGCGGTCACAAAGTGTaGTTTCGTCCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISGGHKV*FRPSSW
Trigger: CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCC...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAATGGAGGGGAGAGTCTTaGGTCCTGGGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQWRGES*VLGKVA
Trigger: AGCCACTTTCCCCAGGACGCAAGACTCTCCCCTCCA...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATATGCACGGTGATGGGGTaGTTGCCTGTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGICTVMG*LPVCCC
Trigger: GCAGCAGCAGACAGGCAACCACCCCATCACCGTGCA...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTTGCCCCAACTGTATAGCAGGTaGCCTTTAAGGCATAACAAA +
Preference number: 4 (lower is better)
Translates to: VCCCCFCTAAMRSIMPLPQLYSR*PLRHNK
Trigger: TTTGTTATGCCTTAAAGGCCACCTGCTATACAGTTG...GGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCTGTAACTCCGATGGCTaGTTTTGTTGTACCCAACGC +
Preference number: 4 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCCNSDG*FCCTQR
Trigger: GCGTTGGGTACAACAAAACCAGCCATCGGAGTTACA...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTCCTGCAGTGGACACCTaGGGTTGGTCTAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSPAVDT*GWSKGT
Trigger: TGTCCCCTTAGACCAACCCCAGGTGTCCACTGCAGG...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCGCTGTCCCGGACAGTaGAGGGGAGAGTCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPRCPGQ*RGESCV
Trigger: GACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCG...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATAAGTCGTCGGCGGATCTaGTACGGATCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGISRRRI*YGSPPP
Trigger: TGGAGGAGGAGATCCGTATCAGATCCGCCGACGACT...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCAAACACATCAGTCGTCGGCGGATCTaGTACGGATCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LNHLRALITDSRHKFKHISRRRI*YGSPPP
Trigger: TGGAGGAGGAGATCCGTATCAGATCCGCCGACGACT...GATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACGTGTCCAGATGGCAATaGGTTGAACTCCTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNVSRWQ*VELLPK
Trigger: TTTCGGGAGGAGTTCAACTCATTGCCATCTGGACAC...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTCCTCGGATCCCTGTGGAGTCTGCTTTGGGGCCGGGTTTCTCAAGTTTCTCTTAGCATTGATGTAGTCTaGACAGGGAATTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: FLGSLWSLLWGRVSQVSLSIDVV*TGNSIQ
Trigger: CTGGATGGAATTCCCTGTTCAGACTACATCAATGCT...AAGAGAAACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGATGGCATCGATCACAATaGAGGTGCCCGTCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRWHRSQ*RCPSGP
Trigger: TGGGCCGGACGGGCACCTTCATTGTGATCGATGCCA...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AATTCAAACACATCCACCTTCTGCTCCGCGTGCATCATGGCCATCATGGCATCGGTAAGGCTTGGTAGATaGACGTGTACTGCATATCCG +
Preference number: 4 (lower is better)
Translates to: NSNTSTFCSACIMAIMASVRLGR*TCTAYP
Trigger: CGGATATGCAGTACACGTTCATCTACCAAGCCTTAC...CGATGCCATGATGGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACCATTTGTCAATTTCCTaGACTCCTCCTCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNHLSIS*TPPPAR
Trigger: TCGGGCTGGAGGAGGAGTTCAGGAAATTGACAAATG...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTGAAAGTCTCGTATACTaGTGGCTTCTGAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLESLVY*WLLKGY
Trigger: ATACCCTTTCAGAAGCCATCAGTATACGAGACTTTC...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTTGGCGGGCCTGGGGCTaGTTGAGAGTGACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: YCVCKTLSSSECLDGKFCWRAWG*LRVTRK
Trigger: CTTTCTGGTCACTCTCAATCAGCCCCAGGCCCGCCA...ACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCAGCAGGGCCCTTTCCTaGGGGCACCCTGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LVCILHSYSTWRETVKAVSRALS*GHPEKV
Trigger: GACCTTTTCAGGGTGCCCTCAGGAAAGGGCCCTGCT...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTTGATTCCCCCAGCGTaGGGTGCTCCAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLLIPPA*GAPRPR
Trigger: CCTGGGCCTTGGAGCACCTCACGCTGGGGGAATCAA...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCAAACACATGGCCAGCTGGTGAAGTaGAGCTGTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FEPSEGADYGFETQIQTHGQLVK*SCETSL
Trigger: CAGGCTGGTCTCACAGCTGCACTTCACCAGCTGGCC...ATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCTTGAACCCAACTGCATaGAACAAAGGAAAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: KILSPSGIDSPSVRCSKALNPTA*NKGKCE
Trigger: TTCACACTTTCCTTTGTTGCATGCAGTTGGGTTCAA...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTACTGCATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACAAAAAGCTACTCCTGTTaGTCATGGCTGAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: CTAYPFEPSEGADYGFETKSYSC*SWLSRA
Trigger: AGCGCGGCTCAGCCATGAGCAACAGGAGTAGCTTTT...TGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATGCAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATACCGATCTTGTCGAAGTaGGTGGTGGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGIPILSK*VVVPCM
Trigger: CATGCACGGCACCACCACCCACTTCGACAAGATCGG...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGATTGTACCCAACGCCGTaGGTCAACGGGACCACCCAG +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRLYPTP*VNGTTQ
Trigger: CTGGGTGGTCCCGTTGACCCACGGCGTTGGGTACAA...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATAGCAGAACCCCTGCAGTaGACACCTGGGGTTGGTCTA +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGIAEPLQ*TPGVGL
Trigger: TAGACCAACCCCAGGTGTCCACTGCAGGGGTTCTGC...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACCGGCACTGGGCTGTTTaGGGGCTGTTTTGTTATGTA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNRHWAV*GLFCYV
Trigger: TACATAACAAAACAGCCCCCAAACAGCCCAGTGCCG...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGTGTCCAGATGGCAATaGGTTGAACTCCTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMVSRWQ*VELLPK
Trigger: TTTCGGGAGGAGTTCAACTCATTGCCATCTGGACAC...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAAAGCATTGATGTAGTCTaGACAGGGAATTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQSIDVV*TGNSIQ
Trigger: CTGGATGGAATTCCCTGTTCAGACTACATCAATGCT...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATCAAGTTTGTTAACATaGCGATGGTCGCAGACTTTT +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRSSLLT*RWSQTF
Trigger: AAAAGTCTGCGACCATCGTCATGTTAACAAACTTGA...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGTCAAGTTTGTTAACATaGCGATGGTCGCAGACTTTT +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKSSLLT*RWSQTF
Trigger: AAAAGTCTGCGACCATCGTCATGTTAACAAACTTGA...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAATGGTCGGGCCAGTACTaGTGGCACTTTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQWSGQY*WHFSSF
Trigger: GAAAGAGGAAAAGTGCCATCAGTACTGGCCCGACCA...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp ATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGCGTGCATTGGTCGGGCCAGTACTaGTGGCACTTTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ITDSRHKFKHIHLLLRVHWSGQY*WHFSSF
Trigger: GAAAGAGGAAAAGTGCCATCAGTACTGGCCCGACCA...ATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGGGTGAAGTGCAGCTGTaGGACCAGCCTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLGEVQL*DQPGGF
Trigger: AAAGCCCCCAGGCTGGTCTCACAGCTGCACTTCACC...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTAGTCGGGCCAGCTGGTaGAGTGCAGCTGTGAGACCA +
Preference number: 4 (lower is better)
Translates to: FPRQSILSGNGIITVIQCSRASW*SAAVRP
Trigger: TGGTCTCACAGCTGCACTTCACCAGCTGGCCCGACT...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCACCATATGTGGTCTCTGAAGTCGTAAACTCTTCACAGCTTGAAATACATCTAAGTCGGGCCAGCTGGTaGAGTGCAGCTGTGAGACCA +
Preference number: 4 (lower is better)
Translates to: APYVVSEVVNSSQLEIHLSRASW*SAAVRP
Trigger: TGGTCTCACAGCTGCACTTCACCAGCTGGCCCGACT...TAGATGTATTTCAAGCTGTGAAGAGTTTACGACTTCAGAGACCACATATGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGTTCTCCATGAGTAACTaGGCCCTCGGTTGGCCAATA +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMFSMSN*ALGWPI
Trigger: TATTGGCCAACCGAGGGCTCAGTTACTCATGGAGAA...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATAAGTGCATTTTCGAACTaGCTTCTGAGTCCTCAACTG +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKISAFSN*LLSPQL
Trigger: CAGTTGAGGACTCAGAAGTCAGTTCGAAAATGCACT...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGTGGGAAGTTTTGTGTTaGGCCTCCAGGCATAGCACT +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMWEVLC*ASRHST
Trigger: AGTGCTATGCCTGGAGGCTCAACACAAAACTTCCCA...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGAAAGCTTGATTCCCTGTaGGCATCTATCAGAACAATA +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRKLDSL*ASIRTI
Trigger: TATTGTTCTGATAGATGCTCACAGGGAATCAAGCTT...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTCTTCCGCCGAGATGCTaGATCATTGTACAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISLPPRC*IIVQRR
Trigger: CCTTCTCTGTACAATGATTCAGCATCTCGGCGGAAG...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATAGCAGGGCCCTTTCCTaGGGGCACCCTGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNSRALS*GHPEKV
Trigger: GACCTTTTCAGGGTGCCCTCAGGAAAGGGCCCTGCT...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCAAACACATCAACTCCTCCCGAAACTaGTTGCAGTCGTCGGCGGAT +
Preference number: 4 (lower is better)
Translates to: LNHLRALITDSRHKFKHINSSRN*LQSSAD
Trigger: ATCCGCCGACGACTGCAAGCAGTTTCGGGAGGAGTT...GATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp GATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGCGTGCAATGGTCGCAGACTTTTaGTCCCAGACCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DYGFETQIQTHPPSAPRAMVADF*SQTILQ
Trigger: CTGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCAT...TGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATAAACACATCCACCTTCTaGTCCGCGTGCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGINTSTF*SACIMA
Trigger: GGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTT...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTGTGCCGTGCATGGTCTaGAGGTGCTTCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FPRQSILSGNGIITVIQCVPCMV*RCFSRE
Trigger: CTCCCTGGAGAAGCACCTGCAGACCATGCACGGCAC...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATTGGGTGGTGGTGCCGTaGATGGTCTGCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNWVVVP*MVCRCF
Trigger: GAAGCACCTGCAGACCATGCACGGCACCACCACCCA...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAAGCCGTCTATGAAGGATaGGTTGATGTAGTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQAVYEG*VDVVCV
Trigger: TACACAGACTACATCAACGCATCCTTCATAGACGGC...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATTTGTGTTAGTATCTTaGAGAGGCACACTTCGCATA +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRFVLVS*RGTLRI
Trigger: TATGCGAAGTGTGCCTCTGCAAGATACTAACACAAA...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATATTCTATCCTAATGTGTaGTCCTCTGTACTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKIFYPNV*SSVLRV
Trigger: CACACGCAGTACAGAGGAGCACACATTAGGATAGAA...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTGCACGTTCAGCAGTGTaGAGCCCAGGCATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FPRQSILSGNGIITVIQCARSAV*SPGMQL
Trigger: CAGCTGCATGCCTGGGCTGCACACTGCTGAACGTGC...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCACCACAGCTTTCCTCTaGTTCCTGAACCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HIRLNHLRALITDSRHKFTTAFL*FLNQVS
Trigger: GCTCACCTGGTTCAGGAAGCAGAGGAAAGCTGTGGT...GAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTAAGCCACGCCACGGGTaGCTTACACGGGATGATCTG +
Preference number: 4 (lower is better)
Translates to: YCVCKTLSSSECLDGKFCKPRHG*LTRDDL
Trigger: CAGATCATCCCGTGTAAGGCACCCGTGGCGTGGCTT...ACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATAGAATCACCCTAGAATaGTCATTGGGAAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHRITLE*SLGRML
Trigger: CAACATCCTTCCCAATGACCATTCTAGGGTGATTCT...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCTGGTGGTGCCGTGCATaGTCTGCAGGTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVCILHSYSTWRETVKAVWWCRA*SAGASP
Trigger: TGGAGAAGCACCTGCAGACCATGCACGGCACCACCA...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTTGTACCCAACGCCGTaGGTCAACGGGACCACCCAG +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLLYPTP*VNGTTQ
Trigger: CTGGGTGGTCCCGTTGACCCACGGCGTTGGGTACAA...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAACGGGAGGGGAGAATaGGAGAGGCAGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQNGRGE*ERQLVF
Trigger: AAAAACCAGCTGCCTCTCCCATTCTCCCCTCCCGTT...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGAAGTCTTGCCCTTGGATaGGGCTCAGAGCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRSLALG*GSEPWS
Trigger: ACTCCACGGCTCTGAGCCCCATCCAAGGGCAAGACT...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGCCTGCCCACTGCATGTaGCCCTGTCTTCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLPAHCM*PCLLAS
Trigger: GCTGGCAAGAAGACAGGGCCACATGCAGTGGGCAGG...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp CATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCGTGTCCAGATGGCAATaGGTTGAACTCCTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: HIRLNHLRALITDSRHKFVSRWQ*VELLPK
Trigger: TTTCGGGAGGAGTTCAACTCATTGCCATCTGGACAC...GAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACGCGTCTTTACTTTCTTaGGGAACTTCAGCATCCCAA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNASLLS*GTSASQ
Trigger: TTGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGC...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGGCCCCTGGGTGGCGATaGAATAGTCCTTCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLAPGWR*NSPSVG
Trigger: ACCGACAGAAGGACTATTTCATCGCCACCCAGGGGC...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGAAACTCTTCACAGCTTaGAATACATCTAAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKKLFTA*NTSKSP
Trigger: GGGACTTTTAGATGTATTTCAAGCTGTGAAGAGTTT...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTCACATGGACCGAAACTaGGAACTTTACAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISHMDRN*ELYRSP
Trigger: GGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTG...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGAAGGAAACAAGAGATaGACTTTCCAGGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMEGNKR*TFQVAR
Trigger: CCGTGCAACCTGGAAAGTTCATCTCTTGTTTCCTTC...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGACAATGGACTTTCTTTaGCTGAAGGAAACAAGAGAT +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLTMDFL*LKETRD
Trigger: ATCTCTTGTTTCCTTCAGTCAAAGAAAGTCCATTGT...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAGATGTCTCCAAATGCTaGAACACAGGTGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQDVSKC*NTGVRL
Trigger: GAGCCTGACACCTGTGTTTCAGCATTTGGAGACATC...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTAACTCCTCCCGAAACTaGTTGCAGTCGTCGGCGGAT +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPNSSRN*LQSSAD
Trigger: ATCCGCCGACGACTGCAAGCAGTTTCGGGAGGAGTT...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp ATGGGCCCAGCGTGCACGGGGTTGAGCGTCTTTACTTTCTTGAGGAACTTCAGCTTTGGGACCTTGAGCTaGTATGAATTTATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: MGPACTGLSVFTFLRNFSFGTLS*YEFILL
Trigger: GAGAAGAATAAATTCATAGCAGCTCAAGGTCCCAAA...GCTGAAGTTCCTCAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGGGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR GCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGAAACACATCCACCTTCTaGTCCGCGTGCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRNTSTF*SACIMA
Trigger: GGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTT...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACGCCGTCTATGAAGGATaGGTTGATGTAGTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDAVYEG*VDVVCV
Trigger: TACACAGACTACATCAACGCATCCTTCATAGACGGC...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATTCCTGCTCTCTCTCCTaGACCTCCGTCAGCATCACG +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNSCSLS*TSVSIT
Trigger: CGTGATGCTGACGGAGGTGCAGGAGAGAGAGCAGGA...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATTTTGTGTTAGTATCTTaGAGAGGCACACTTCGCATA +
Preference number: 4 (lower is better)
Translates to: SLYREGERSTFSSVQPRHFVLVS*RGTLRI
Trigger: TATGCGAAGTGTGCCTCTGCAAGATACTAACACAAA...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATCACTGTTAGGAAAGTaGATTTTCGAACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRSLLGK*IFELTS
Trigger: AGAAGTCAGTTCGAAAATGCACTTTCCTAACAGTGA...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCTGTGCTCCTCTGTACTaGGTGTGTAAGACGCTCAGT +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDACAPLY*VCKTLS
Trigger: ACTGAGCGTCTTACACACGCAGTACAGAGGAGCACA...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTGGCGGTCACAAAGTGTaGTTTCGTCCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPGGHKV*FRPSSW
Trigger: CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCC...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCTCCCCCAGCGTGAGGTaGTCCAAGGCCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETSPSVR*SKAQEI
Trigger: GATCTCCTGGGCCTTGGAGCACCTCACGCTGGGGGA...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAAGCATTTGAACCCAACTaGATGCAACAAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQAFEPN*MQQRKV
Trigger: CACTTTCCTTTGTTGCATGCAGTTGGGTTCAAATGC...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCAGGAATCCCAAGTCGTaGCTGCCGCAAATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVCILHSYSTWRETVKAVRNPKS*LPQISS
Trigger: GCTGGAGATTTGCGGCAGGCACGACTTGGGATTCCT...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACGGAATTCCATCCAGTTaGCTCAGAATCACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDGIPSS*LRITLE
Trigger: TTCTAGGGTGATTCTGAGCCAACTGGATGGAATTCC...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACGGAATTCCATCCAGTTaGCTCAGAATCACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNGIPSS*LRITLE
Trigger: TTCTAGGGTGATTCTGAGCCAACTGGATGGAATTCC...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAACAGCAAATGGTGCTTTaGGGTGTAACTCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQQQMVL*GVTPMA
Trigger: AGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTCAGCAAATGGTGCTTTaGGGTGTAACTCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSQQMVL*GVTPMA
Trigger: AGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGATTTCTGAGGGTGGTCTaGGCCAAACGACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRFLRVV*AKRQAA
Trigger: AGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGTTCATCTGAATGTTTaGATGGGAAGTTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLVHLNV*MGSFVL
Trigger: CAACACAAAACTTCCCATCCAAACATTCAGATGAAC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGTTCATCTGAATGTTTaGATGGGAAGTTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKVHLNV*MGSFVL
Trigger: CAACACAAAACTTCCCATCCAAACATTCAGATGAAC...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATCTCAGAGCCGTGGAGTaGGCGAGAAGCTTGATTCCC +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNLRAVE*ARSLIP
Trigger: GGGAATCAAGCTTCTCGCCCACTCCACGGCTCTGAG...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATGCAGAACCCCTGCAGTaGACACCTGGGGTTGGTCTA +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNAEPLQ*TPGVGL
Trigger: TAGACCAACCCCAGGTGTCCACTGCAGGGGTTCTGC...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAATGGAAAAAGTTTaGGAACAGGCAGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMGMEKV*EQAEPL
Trigger: CAGGGGTTCTGCCTGTTCCCAAACTTTTTCCATTCC...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCCGGCACTGGGCTGTTTaGGGGCTGTTTTGTTATGTA +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDARHWAV*GLFCYV
Trigger: TACATAACAAAACAGCCCCCAAACAGCCCAGTGCCG...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGACTTCTAATCACTATTTaGCATTTGAACCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRLLITI*HLNPTA
Trigger: TGCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAG...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGACACACAGATCAGAATaGTCGTCTTCTAATCACTAT +
Preference number: 4 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKTHRSE*SSSNHY
Trigger: ATAGTGATTAGAAGACGACCATTCTGATCTGTGTGT...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATTCAGCAACATTCACTaGCATTATAATCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRFSNIH*HYNQSK
Trigger: CTTGCTCTGATTATAATGCCAGTGAATGTTGCTGAA...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTCTTGTCGCTGGTGCTaGCCACAGCTTTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLSCRWC*PQLSSA
Trigger: AGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGA...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AATTCAAACACATCCACCTTCTGCTCCGCGTGCATCATGGCCATCATGGCATCGTCAAGTTTGTTAACATaGCGATGGTCGCAGACTTTT +
Preference number: 4 (lower is better)
Translates to: NSNTSTFCSACIMAIMASSSLLT*RWSQTF
Trigger: AAAAGTCTGCGACCATCGTCATGTTAACAAACTTGA...CGATGCCATGATGGCCATGATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCTGGTCGGGCCAGTACTaGTGGCACTTTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVCILHSYSTWRETVKAVWSGQY*WHFSSF
Trigger: GAAAGAGGAAAAGTGCCATCAGTACTGGCCCGACCA...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCTGGCATCGATCACAATaGAGGTGCCCGTCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETWHRSQ*RCPSGP
Trigger: TGGGCCGGACGGGCACCTTCATTGTGATCGATGCCA...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTGTAAGGCTTGGTAGATaGACGTGTACTGCATATCCG +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSVRLGR*TCTAYP
Trigger: CGGATATGCAGTACACGTTCATCTACCAAGCCTTAC...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAACACATGGACCGAAACTaGGAACTTTACAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQHMDRN*ELYRSP
Trigger: GGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTG...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATAGCGATCAGTTATCAGTaGAAATGTCAAATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGSTGPPSIYISSRSAKIAISYQ*KCQIRP
Trigger: AGGCCTTATTTGACATTTTCACTGATAACTGATCGC...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACTCACTATTTGGCATTTaGACCCAACTGCATGCAACA +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNSLFGI*TQLHAT
Trigger: TGTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGA...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTAGCATCACCCTTTGCTaGTCTTGCTCCTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSSITLC*SCSSKI
Trigger: AATCTTGGAGGAGCAAGAGCAGCAAAGGGTGATGCT...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTAGCAGCATCACCCTTTaGTGCTCTTGCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPSSITL*CSCSSK
Trigger: CTTGGAGGAGCAAGAGCAGCAAAGGGTGATGCTGCT...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATAACTCCTCCCGAAACTaGTTGCAGTCGTCGGCGGAT +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNNSSRN*LQSSAD
Trigger: ATCCGCCGACGACTGCAAGCAGTTTCGGGAGGAGTT...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTTGTTTGCCGGCAAGTTaGCCGTCCTCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPCLPAS*PSSCSP
Trigger: AGGAGAACATGAGGACGGGCAACTTGCCGGCAAACA...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGATGTTTGCCGGCAAGTTaGCCGTCCTCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRCLPAS*PSSCSP
Trigger: AGGAGAACATGAGGACGGGCAACTTGCCGGCAAACA...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATGGCCTTCTTCATGTTTaGCGGCAAGTTGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNGLLHV*RQVARP
Trigger: AGGACGGGCAACTTGCCGGCAAACATGAAGAAGGCC...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTATGAACCAAAGCCGGTaGCCCTCGACTTTGACTTCG +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPMNQSR*PSTLTS
Trigger: CGAAGTCAAAGTCGAGGGGCACCGGCTTTGGTTCAT...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTATGAACCAAAGCCGGTaGCCCTCGACTTTGACTTCG +
Preference number: 4 (lower is better)
Translates to: YCVCKTLSSSECLDGKFCMNQSR*PSTLTS
Trigger: CGAAGTCAAAGTCGAGGGGCACCGGCTTTGGTTCAT...ACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACATGAACTTTCCAGGTTaGACGGAGAAGATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNMNFPG*TEKILS
Trigger: ACTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCAT...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCACCACAGCTTTCCTCTaGTTCCTGAACCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LVCILHSYSTWRETVKAVTTAFL*FLNQVS
Trigger: GCTCACCTGGTTCAGGAAGCAGAGGAAAGCTGTGGT...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAATGTAAGATTCAGTGTTaGTACATTCACACCCCATTC +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQCKIQC*YIHTPF
Trigger: GAATGGGGTGTGAATGTACCAACACTGAATCTTACA...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GCACCATATGTGGTCTCTGAAGTCGTAAACTCTTCACAGCTTGAAATACATCTAGGAGATCCTGTGATCTaGGGCCTTGGTAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: APYVVSEVVNSSQLEIHLGDPVI*GLGRGH
Trigger: ATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCC...TAGATGTATTTCAAGCTGTGAAGAGTTTACGACTTCAGAGACCACATATGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATACGGCACTGGGCTGTTTaGGGGCTGTTTTGTTATGTA +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGIRHWAV*GLFCYV
Trigger: TACATAACAAAACAGCCCCCAAACAGCCCAGTGCCG...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATGGTGTCGGCACTaGGCTGTTTGGGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FPRQSILSGNGIITVIQCQWCRH*AVWGLF
Trigger: AAACAGCCCCCAAACAGCCCAGTGCCGACACCATTG...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTGCGTCTTTACTTTCTTaGGGAACTTCAGCATCCCAA +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSASLLS*GTSASQ
Trigger: TTGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGC...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGATTCTCCATGAGTAACTaGGCCCTCGGTTGGCCAATA +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRFSMSN*ALGWPI
Trigger: TATTGGCCAACCGAGGGCTCAGTTACTCATGGAGAA...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTATCGTTATTTCTCCATaGGTAACTGAGCCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSIVISP*VTEPSV
Trigger: AACCGAGGGCTCAGTTACTCATGGAGAAATAACGAT...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGACCATATGTGGTCTCTaGAGTCGTAAACTCTTCACA +
Preference number: 4 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMTICGL*SRKLFT
Trigger: TGTGAAGAGTTTACGACTTCAGAGACCACATATGGT...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCAGTGGGCGAGAAGCTTaGTTCCCTGTGAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: LVCILHSYSTWRETVKAVSGREA*FPVSIY
Trigger: ATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACT...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATAGAAGGAAACAAGAGATaGACTTTCCAGGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGIEGNKR*TFQVAR
Trigger: CCGTGCAACCTGGAAAGTTCATCTCTTGTTTCCTTC...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAAACAATGGACTTTCTTTaGCTGAAGGAAACAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQTMDFL*LKETRD
Trigger: ATCTCTTGTTTCCTTCAGTCAAAGAAAGTCCATTGT...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAACCGAAGCAGCTTGCCTaGGACCCATGCAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIEPKQLA*DPCRTV
Trigger: GACAGTCCTGCATGGGTCTCAGGCAAGCTGCTTCGG...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATAAGCATCACCCTTTGCTaGTCTTGCTCCTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGISITLC*SCSSKI
Trigger: AATCTTGGAGGAGCAAGAGCAGCAAAGGGTGATGCT...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTGTTTGCCGGCAAGTTaGCCGTCCTCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLCLPAS*PSSCSP
Trigger: AGGAGAACATGAGGACGGGCAACTTGCCGGCAAACA...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTCTATCCTAATGTGTaGTCCTCTGTACTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSFYPNV*SSVLRV
Trigger: CACACGCAGTACAGAGGAGCACACATTAGGATAGAA...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATATGAACCAAAGCCGGTaGCCCTCGACTTTGACTTCG +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNMNQSR*PSTLTS
Trigger: CGAAGTCAAAGTCGAGGGGCACCGGCTTTGGTTCAT...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATAAAAGCTACTCCTGTTaGTCATGGCTGAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNKSYSC*SWLSRA
Trigger: AGCGCGGCTCAGCCATGAGCAACAGGAGTAGCTTTT...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTTCATACGGGATGATCTaGATGACCCTGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPSYGMI*MTLAFF
Trigger: GAAGAAGGCCAGGGTCATCCAGATCATCCCGTATGA...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254667.8
ENST00000306042.9
CDS-3UTR CCA 90 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTCAAACGACAGGCAGCTaGACAGCAAATGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: YCVCKTLSSSECLDGKFCQTTGS*TANGAL
Trigger: CAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTG...ACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTGAGAGTCTTGCGTCCTaGGGAAAGTGGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FPRQSILSGNGIITVIQCESLAS*GKWLLL
Trigger: AAGGAGAAGCCACTTTCCCCAGGACGCAAGACTCTC...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTGAGGGCGCTGATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTTCTCTTTGTAACCTaGGAAGGATGTTGGGATATC +
Preference number: 4 (lower is better)
Translates to: LRALITDSRHKFKHIHLLLLFVT*EGCWDI
Trigger: GATATCCCAACATCCTTCCCAGGTTACAAAGAGAAG...CAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
3UTR CAA 72 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTaGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATA +
Preference number: 4 (lower is better)
Translates to: YCVCKTLSSSEC*DGKFCVEPPGI
Trigger: TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 72 bp CTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTaGACTTCGAACTCTCAAATAAATGACCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LLDMNQSRCPST*TSNSQINDQRN
Trigger: ATTTCTCTGGTCATTTATTTGAGAGTTCGAAGTCAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAATCCTGTTTGGGACCTTaGGCTGCTATGAATTTATTC +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQSCLGP*AAMNLF
Trigger: GAATAAATTCATAGCAGCTCAAGGTCCCAAACAGGA...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCTCCTGTTTGGGACCTTaGGCTGCTATGAATTTATTC +
Preference number: 4 (lower is better)
Translates to: HIRLNHLRALITDSRHKFSCLGP*AAMNLF
Trigger: GAATAAATTCATAGCAGCTCAAGGTCCCAAACAGGA...GAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR TCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATCTTCCGCCGAGATGCTaGATCATTGTACAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNLPPRC*IIVQRR
Trigger: CCTTCTCTGTACAATGATTCAGCATCTCGGCGGAAG...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGGCACGGAGAAGATTCTaGGTCCCTCAGGGATTGATT +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLARRRF*VPQGLI
Trigger: AATCAATCCCTGAGGGACTCAGAATCTTCTCCGTGC...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAATGAACTTTCCAGGTTaGACGGAGAAGATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQMNFPG*TEKILS
Trigger: ACTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCAT...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCATGAACTTTCCAGGTTaGACGGAGAAGATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDAMNFPG*TEKILS
Trigger: ACTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCAT...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGGTGCTCCACGGGGATaGGAAAATACTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETGAPRG*ENTSWA
Trigger: GGCCCAAGAAGTATTTTCCCATCCCCGTGGAGCACC...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATCAAACGACAGGCAGCTaGACAGCAAATGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNQTTGS*TANGAL
Trigger: CAAAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTG...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCTTTCTGAGGGTGGTCTaGGCCAAACGACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETFLRVV*AKRQAA
Trigger: AGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACACACACAGATCAGAATaGTCGTCTTCTAATCACTAT +
Preference number: 4 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNTHRSE*SSSNHY
Trigger: ATAGTGATTAGAAGACGACCATTCTGATCTGTGTGT...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACTTCAGCAACATTCACTaGCATTATAATCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDFSNIH*HYNQSK
Trigger: CTTGCTCTGATTATAATGCCAGTGAATGTTGCTGAA...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAATCAAGTTTGTTAACATaGCGATGGTCGCAGACTTTT +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQSSLLT*RWSQTF
Trigger: AAAAGTCTGCGACCATCGTCATGTTAACAAACTTGA...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTAGTGCATTTTCGAACTaGCTTCTGAGTCCTCAACTG +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPSAFSN*LLSPQL
Trigger: CAGTTGAGGACTCAGAAGTCAGTTCGAAAATGCACT...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAGCGATCAGTTATCAGTaGAAATGTCAAATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQAISYQ*KCQIRP
Trigger: AGGCCTTATTTGACATTTTCACTGATAACTGATCGC...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCAAGCTTGATTCCCTGTaGGCATCTATCAGAACAATA +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDAKLDSL*ASIRTI
Trigger: TATTGTTCTGATAGATGCTCACAGGGAATCAAGCTT...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCTTTGTGTTAGTATCTTaGAGAGGCACACTTCGCATA +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDAFVLVS*RGTLRI
Trigger: TATGCGAAGTGTGCCTCTGCAAGATACTAACACAAA...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTCCATCACGAACAGTTTaGCTTCCAAAAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YCVCKTLSSSECLDGKFCPSRTV*LPKMLL
Trigger: CAGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGG...ACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAATTGAACCCAACTGCATaGAACAAAGGAAAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQLNPTA*NKGKCE
Trigger: TTCACACTTTCCTTTGTTGCATGCAGTTGGGTTCAA...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCTGGGAAAATACTTCTTaGGCCCTGAGGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETWENTS*ALRVTC
Trigger: GCAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCA...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAAGGTGCTCCACGGGGATaGGAAAATACTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIEGAPRG*ENTSWA
Trigger: GGCCCAAGAAGTATTTTCCCATCCCCGTGGAGCACC...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGAGGAATTCCATCCAGTTaGCTCAGAATCACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRGIPSS*LRITLE
Trigger: TTCTAGGGTGATTCTGAGCCAACTGGATGGAATTCC...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAACTTCTCCTTTGTTCCTaGAATGGAAAAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQLLLCS*NGKSLG
Trigger: TCCCAAACTTTTTCCATTCCAGGAACAAAGGAGAAG...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTCTTCTAATCACTATTTaGCATTTGAACCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISLLITI*HLNPTA
Trigger: TGCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAG...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCCATTCATATAGCACATaGAGAGAAACCGTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDAHSYST*RETVKA
Trigger: TGCCTTTACGGTTTCTCTCCATGTGCTATATGAATG...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTTTCAGCAACATTCACTaGCATTATAATCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISFSNIH*HYNQSK
Trigger: CTTGCTCTGATTATAATGCCAGTGAATGTTGCTGAA...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCTTCTCCATGAGTAACTaGGCCCTCGGTTGGCCAATA +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETFSMSN*ALGWPI
Trigger: TATTGGCCAACCGAGGGCTCAGTTACTCATGGAGAA...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAAACTCTTCACAGCTTaGAATACATCTAAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQKLFTA*NTSKSP
Trigger: GGGACTTTTAGATGTATTTCAAGCTGTGAAGAGTTT...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGGACGCTCAGTTCATCTaGATGTTTGGATGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLDAQFI*MFGWEV
Trigger: AACTTCCCATCCAAACATTCAGATGAACTGAGCGTC...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAAGGGCTTCAAGGATTCTaGCAGAGGGCTCCTAGACAT +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIEGLQGF*QRAPRH
Trigger: ATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCC...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAACCAGATGGTGTTTGTTaGGCTGTGACTCTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIEPDGVC*AVTLSR
Trigger: CCTCGACAGAGTCACAGCTCAACAAACACCATCTGG...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR GCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGGCCGTCTATGAAGGATaGGTTGATGTAGTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLAVYEG*VDVVCV
Trigger: TACACAGACTACATCAACGCATCCTTCATAGACGGC...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAATCACTGTTAGGAAAGTaGATTTTCGAACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQSLLGK*IFELTS
Trigger: AGAAGTCAGTTCGAAAATGCACTTTCCTAACAGTGA...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTGCATTTGAACCCAACTaGATGCAACAAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPAFEPN*MQQRKV
Trigger: CACTTTCCTTTGTTGCATGCAGTTGGGTTCAAATGC...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAAAACGGGAGGGGAGAATaGGAGAGGCAGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIENGRGE*ERQLVF
Trigger: AAAAACCAGCTGCCTCTCCCATTCTCCCCTCCCGTT...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTGTTCATCTGAATGTTTaGATGGGAAGTTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LCTACVRRSVHLNVWMGSVHLNV*MGSFVL
Trigger: CAACACAAAACTTCCCATCCAAACATTCAGATGAAC...ACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAATTTCGTCCTTCCAGCTaGGCACCAAGTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIEFRPSS*APSLAL
Trigger: AAGGGCAAGACTTGGTGCCCAGCTGGAAGGACGAAA...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 72 bp CCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATaGTACCATCACGAACAGTTTGCCTTCCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: PKLRTLQKSPFT*YHHEQFAFQKC
Trigger: GCATTTTTGGAAGGCAAACTGTTCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GCACCATATGTGGTCTCTGAAGTCGTAAACTCTTCACAGCTTGAAATACATCTACTATGTAGGAAGCATTaGTGTAGTCTGAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: APYVVSEVVNSSQLEIHLLCRKH*CSLNRE
Trigger: TTCCCTGTTCAGACTACATCAATGCTTCCTACATAG...TAGATGTATTTCAAGCTGTGAAGAGTTTACGACTTCAGAGACCACATATGGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR TCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATGAAAGTCTCGTATACTaGTGGCTTCTGAAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNESLVY*WLLKGY
Trigger: ATACCCTTTCAGAAGCCATCAGTATACGAGACTTTC...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGAGCGATCAGTTATCAGTaGAAATGTCAAATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRAISYQ*KCQIRP
Trigger: AGGCCTTATTTGACATTTTCACTGATAACTGATCGC...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATACTTAAAGGTACTTCTTaGTACAAGAGATGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: LSSSECLDGKFCVEPPGILKGTS*YKRCQL
Trigger: TAACTGGCATCTCTTGTATCAAGAAGTACCTTTAAG...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTCACTATTTGGCATTTaGACCCAACTGCATGCAACA +
Preference number: 4 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLSLFGI*TQLHAT
Trigger: TGTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGA...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAAATGGTCGCAGACTTTTaGTCCCAGACCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIEMVADF*SQTILQ
Trigger: CTGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCAT...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTAGAATCACCCTAGAATaGTCATTGGGAAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: FPRQSILSGNGIITVIQCRITLE*SLGRML
Trigger: CAACATCCTTCCCAATGACCATTCTAGGGTGATTCT...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCAACTGTATAGCAGGTaGCCTTTAAGGCATAACAAA +
Preference number: 4 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPQLYSR*PLRHNK
Trigger: TTTGTTATGCCTTAAAGGCCACCTGCTATACAGTTG...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCTGTAAGATTCAGTGTTaGTACATTCACACCCCATTC +
Preference number: 4 (lower is better)
Translates to: LVCILHSYSTWRETVKAVCKIQC*YIHTPF
Trigger: GAATGGGGTGTGAATGTACCAACACTGAATCTTACA...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGAAAACTCTTCACAGCTTaGAATACATCTAAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: WTETENFTEVPIYIVPSRKLFTA*NTSKSP
Trigger: GGGACTTTTAGATGTATTTCAAGCTGTGAAGAGTTT...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTTTTGGGACCTTGAGCTaGTATGAATTTATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: YCVCKTLSSSECLDGKFCFGTLS*YEFILL
Trigger: GAGAAGAATAAATTCATAGCAGCTCAAGGTCCCAAA...ACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTAAAGGCAGTCTCACTGTTAGGAAAGTaGATTTTCGAACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: LVCILHSYSTWRETVKAVSLLGK*IFELTS
Trigger: AGAAGTCAGTTCGAAAATGCACTTTCCTAACAGTGA...GACTGCCTTTACGGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCTTCTATCCTAATGTGTaGTCCTCTGTACTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETFYPNV*SSVLRV
Trigger: CACACGCAGTACAGAGGAGCACACATTAGGATAGAA...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTTTGAACCCAACTGCATaGAACAAAGGAAAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: FPRQSILSGNGIITVIQCLNPTA*NKGKCE
Trigger: TTCACACTTTCCTTTGTTGCATGCAGTTGGGTTCAA...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATTGTAAGATTCAGTGTTaGTACATTCACACCCCATTC +
Preference number: 4 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNCKIQC*YIHTPF
Trigger: GAATGGGGTGTGAATGTACCAACACTGAATCTTACA...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 72 bp GATCAGAATGGTCGTCTTCTAATCACTATTTGGCATTaGAACCCAACTGCATGCAACAAAGGAAAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: DQNGRLLITIWH*NPTACNKGKCE
Trigger: TTCACACTTTCCTTTGTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAGACGACCATTCTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
3UTR CAA 72 bp ACACACAGATCAGAATGGTCGTCTTCTAATCACTATTaGGCATTTGAACCCAACTGCATGCAACAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: THRSEWSSSNHY*AFEPNCMQQRK
Trigger: TTTCCTTTGTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAGACGACCATTCTGATCTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCCTATGTAGGAAGCATTaGTGTAGTCTGAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETLCRKH*CSLNRE
Trigger: TTCCCTGTTCAGACTACATCAATGCTTCCTACATAG...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTACAATGGACTTTCTTTaGCTGAAGGAAACAAGAGAT +
Preference number: 4 (lower is better)
Translates to: FPRQSILSGNGIITVIQCTMDFL*LKETRD
Trigger: ATCTCTTGTTTCCTTCAGTCAAAGAAAGTCCATTGT...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCAGAATCACCCTAGAATaGTCATTGGGAAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETRITLE*SLGRML
Trigger: CAACATCCTTCCCAATGACCATTCTAGGGTGATTCT...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAACTATGTAGGAAGCATTaGTGTAGTCTGAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIELCRKH*CSLNRE
Trigger: TTCCCTGTTCAGACTACATCAATGCTTCCTACATAG...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR TCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCAAGCTTGATTCCCTGTaGGCATCTATCAGAACAATA +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETKLDSL*ASIRTI
Trigger: TATTGTTCTGATAGATGCTCACAGGGAATCAAGCTT...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAAGCATTTGAACCCAACTaGATGCAACAAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIEAFEPN*MQQRKV
Trigger: CACTTTCCTTTGTTGCATGCAGTTGGGTTCAAATGC...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCTTTGGGACCTTGAGCTaGTATGAATTTATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PFKTLVCILHSYSTWRETFGTLS*YEFILL
Trigger: GAGAAGAATAAATTCATAGCAGCTCAAGGTCCCAAA...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR GCA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAATTTGGGACCTTGAGCTaGTATGAATTTATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DIFLFILCTSARYLMAIEFGTLS*YEFILL
Trigger: GAGAAGAATAAATTCATAGCAGCTCAAGGTCCCAAA...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS GCA 90 bp CAGGGAAGGCTATGGGGAGCGAAGCCAGGCCAGGCCCAGGCTGGTTaGCACGTGCCCATCAGAGCCAGGGCCCTGCACACCTGTGTGGCG +
Preference number: 5 (lower is better)
Translates to: QGRLWGAKPGQAQAG*HVPIRARALHTCVA
Trigger: CGCCACACAGGTGTGCAGGGCCCTGGCTCTGATGGGCACGTGGCAACCAGCCTGGGCCTGGCCTGGCTTCGCTCCCCATAGCCTTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp GGCTATGGGGAGCGAAGCCAGGCCAGGCCCAGGCTGGTTGCCACGTaGCCATCAGAGCCAGGGCCCTGCACACCTGTGTGGCGAAGGCAT +
Preference number: 5 (lower is better)
Translates to: GYGERSQARPRLVAT*PSEPGPCTPVWRRH
Trigger: ATGCCTTCGCCACACAGGTGTGCAGGGCCCTGGCTCTGATGGGCACGTGGCAACCAGCCTGGGCCTGGCCTGGCTTCGCTCCCCATAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp AGGCTGAAGTGGCAGCTGGCGAGGGGCAGCCTGGTCCTCGGACCCTaGTCTCCAGGACAGCGTGTTCTGGAAGACTCTGCTGTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: RLKWQLARGSLVLGP*SPGQRVLEDSAVGA
Trigger: GGCCCCCACAGCAGAGTCTTCCAGAACACGCTGTCCTGGAGACCAGGGTCCGAGGACCAGGCTGCCCCTCGCCAGCTGCCACTTCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp TACGAGGGAAAGATGAGGACGAGGGAGTCCCTGAGGTCCCACGCGTaGGCAGGGAAGGCTATGGGGAGCGAAGCCAGGCCAGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: YEGKMRTRESLRSHA*AGKAMGSEARPGPG
Trigger: GCCTGGGCCTGGCCTGGCTTCGCTCCCCATAGCCTTCCCTGCCCACGCGTGGGACCTCAGGGACTCCCTCGTCCTCATCTTTCCCTCGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp CCGAGGCTGTCCTTCCCATCACAGGTGAGGAAACCGAGGCTGAAGTaGCAGCTGGCGAGGGGCAGCCTGGTCCTCGGACCCTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PRLSFPSQVRKPRLK*QLARGSLVLGPWSP
Trigger: TGGAGACCAGGGTCCGAGGACCAGGCTGCCCCTCGCCAGCTGCCACTTCAGCCTCGGTTTCCTCACCTGTGATGGGAAGGACAGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp GCCAGGCCCAGGCTGGTTGCCACGTGCCCATCAGAGCCAGGGCCCTaGACACCTGTGTGGCGAAGGCATCGGGTTTGCTTTGGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: ARPRLVATCPSEPGP*TPVWRRHRVCFGKL
Trigger: TAGCTTCCCAAAGCAAACCCGATGCCTTCGCCACACAGGTGTGCAGGGCCCTGGCTCTGATGGGCACGTGGCAACCAGCCTGGGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAATCCTCCCGAAACTGCTaGCAGTCGTCGGCGGATCTG +
Preference number: 5 (lower is better)
Translates to: PGIALDQPRPLWQNGRGESSRNC*QSSADL
Trigger: CAGATCCGCCGACGACTGCAAGCAGTTTCGGGAGGA...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS GCA 90 bp TCCAGCCCGATCTTGTCGAAGTGGGTGGTGGTGCCGTGCATGGTCTaGAGGTGCTTCTCCAGGGAGGACACGTCCAGCTCTGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SSPILSKWVVVPCMV*RCFSREDTSSSVSP
Trigger: CGGGGACACAGAGCTGGACGTGTCCTCCCTGGAGAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGATCGGGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS-3UTR CAA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAACGATGGCTGGTTTTGTaGTACCCAACGCCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: PGIALDQPRPLWQNGRGERWLVL*YPTPWV
Trigger: GACCCACGGCGTTGGGTACAACAAAACCAGCCATCG...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS TCA 90 bp GTTCCCCGAGAGCCAACAGCGCTCGGCACAGTGATACCCACCAGGTaGGCCGGGAAAAGCTACTCCTGTTGCTCATGGCTGAGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: VPREPTALGTVIPTR*AGKSYSCCSWLSRA
Trigger: AGCGCGGCTCAGCCATGAGCAACAGGAGTAGCTTTTCCCGGCTCACCTGGTGGGTATCACTGTGCCGAGCGCTGTTGGCTCTCGGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487428.1
CDS GCA 90 bp GTACTGCATCTGCAGAGAGGCCAGGGGTGCCCACACCCTCAACTCTaGCCTGCAGTCTTGGCCCACGTGGAGCTTGGCAGACCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: VLHLQRGQGCPHPQL*PAVLAHVELGRPKR
Trigger: CCTCTTTGGTCTGCCAAGCTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGAGGGTGTGGGCACCCCTGGCCTCTCTGCAGATGCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp CCTCCTCCAGCCCGATCTTGTCGAAGTGGGTGGTGGTGCCGTGCATaGTCTGCAGGTGCTTCTCCAGGGAGGACACGTCCAGCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: PPPARSCRSGWWCRA*SAGASPGRTRPALC
Trigger: ACACAGAGCTGGACGTGTCCTCCCTGGAGAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGATCGGGCTGGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS CCA 90 bp GGTTCACGGCACGGTCCCTGTCCTTCATGGAGACAGCTTCTTCCGTaGGGTCCAGGGAACTCCCTGACCTTCCAGCAGCAGAACGCCGAC +
Preference number: 5 (lower is better)
Translates to: GSRHGPCPSWRQLLP*GPGNSLTFQQQNAD
Trigger: GTCGGCGTTCTGCTGCTGGAAGGTCAGGGAGTTCCCTGGACCCCACGGAAGAAGCTGTCTCCATGAAGGACAGGGACCGTGCCGTGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442830.5
CDS-3UTR CAA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTGGCCTGAGGTCGTGGTaGTCTCGTTGCTGTCGGCAG +
Preference number: 5 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCAGLRSW*SRCCRQ
Trigger: CTGCCGACAGCAACGAGACAACCACGACCTCAGGCC...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254667.8
CDS-3UTR CAA 90 bp GGATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGTTTCACCAGCCTGGGGGCTTaGCAGCCGTCGGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: GWCSRPKPRSPPRTPGCFTSLGA*QPSGSC
Trigger: ACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGGT...GAAACATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS TCA 90 bp TCTTGTCCTCCTCAAGGCCACAGCCTTTTCCTAGGTGGTCTCAGCTaGGTTCACCTGCATGGCCTCGGCTGGGTGGCTCAGGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SCPPQGHSLFLGGLS*VHLHGLGWVAQAPL
Trigger: CAGAGGGGCCTGAGCCACCCAGCCGAGGCCATGCAGGTGAACTCAGCTGAGACCACCTAGGAAAAGGCTGTGGCCTTGAGGAGGACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS GCA 90 bp AACTCCTCCTCCAGCCCGATCTTGTCGAAGTGGGTGGTGGTGCCGTaGATGGTCTGCAGGTGCTTCTCCAGGGAGGACACGTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: NSSSSPILSKWVVVP*MVCRCFSREDTSSS
Trigger: AGAGCTGGACGTGTCCTCCCTGGAGAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGATCGGGCTGGAGGAGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS GCA 90 bp TTCGGGGGTTCCTGGACGGCTTCTCGTGAACACCTGCATGACAGGTaGAGAGCGCCTGCATCACTGCGTGCAGGTGGCTTTTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: FGGSWTASREHLHDR*RAPASLRAGGFCPW
Trigger: CCAGGGACAAAAGCCACCTGCACGCAGTGATGCAGGCGCTCTGCACCTGTCATGCAGGTGTTCACGAGAAGCCGTCCAGGAACCCCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp AAAGCCCGTTCTTCGGGGGTTCCTGGACGGCTTCTCGTGAACACCTaGATGACAGGTGCAGAGCGCCTGCATCACTGCGTGCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: KARSSGVPGRLLVNT*MTGAERLHHCVQVA
Trigger: AGCCACCTGCACGCAGTGATGCAGGCGCTCTGCACCTGTCATGCAGGTGTTCACGAGAAGCCGTCCAGGAACCCCCGAAGAACGGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp TGCCCGTCCGGCCCACGCCCGCGCTTTGGGGAAAGAGAAAGATGCTaGGTCGTGAGTCACACTCCTCCCGAAGTAAATGAAAGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: CPSGPRPRFGERERC*VVSHTPPEVNERPR
Trigger: TCGGGGCCTTTCATTTACTTCGGGAGGAGTGTGACTCACGACGCAGCATCTTTCTCTTTCCCCAAAGCGCGGGCGTGGGCCGGACGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp AGGTGCCCGTCCGGCCCACGCCCGCGCTTTGGGGAAAGAGAAAGATaGTGCGTCGTGAGTCACACTCCTCCCGAAGTAAATGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: RCPSGPRPRFGERER*CVVSHTPPEVNERP
Trigger: GGGCCTTTCATTTACTTCGGGAGGAGTGTGACTCACGACGCAGCATCTTTCTCTTTCCCCAAAGCGCGGGCGTGGGCCGGACGGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp GGCTTGGTAGATGAACGTGTACTGCATCTGCAGAGAGGCCAGGGGTaGCCACACCCTCAACTCTGCCCTGCAGTCTTGGCCCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: GLVDERVLHLQRGQG*PHPQLCPAVLAHVE
Trigger: CTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGAGGGTGTGGGCACCCCTGGCCTCTCTGCAGATGCAGTACACGTTCATCTACCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp CCTCGGCTGCCCTCCCGCATCTGCAAGCTCATATCCGAAGCAGCTTaGCTGAGACCCATGCAGGACTGTCTGGGTCAGCTGGTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: PRLPSRICKLISEAA*LRPMQDCLGQLVLH
Trigger: GTGAAGCACCAGCTGACCCAGACAGTCCTGCATGGGTCTCAGGCAAGCTGCTTCGGATATGAGCTTGCAGATGCGGGAGGGCAGCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS CCA 90 bp CCTGAGAGCCCTGGCGAGCGGCAAGCTAAAACCCACCAGCAGGAGTaGACACAAGGGCTCCATGGTGGACAGAGCACCGCGTTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: PESPGERQAKTHQQE*TQGLHGGQSTAFSV
Trigger: TACTGAGAACGCGGTGCTCTGTCCACCATGGAGCCCTTGTGTCCACTCCTGCTGGTGGGTTTTAGCTTGCCGCTCGCCAGGGCTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp CTGGTTGCCACGTGCCCATCAGAGCCAGGGCCCTGCACACCTGTGTaGCGAAGGCATCGGGTTTGCTTTGGGAAGCTAGATCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: LVATCPSEPGPCTPV*RRHRVCFGKLDQGK
Trigger: CTTGCCCTGATCTAGCTTCCCAAAGCAAACCCGATGCCTTCGCCACACAGGTGTGCAGGGCCCTGGCTCTGATGGGCACGTGGCAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTCCTCCCGAAACTGCTaGCAGTCGTCGGCGGATCTG +
Preference number: 5 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCASSRNC*QSSADL
Trigger: CAGATCCGCCGACGACTGCAAGCAGTTTCGGGAGGA...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GCCGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGAACCAGCCTGGGGGCTTaGCAGCCGTCGGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: AVGQRDHPAFTSLLVQPRTSLGA*QPSGSC
Trigger: ACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGGT...TCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS TCA 90 bp GGCTGCCCTCCCGCATCTGCAAGCTCATATCCGAAGCAGCTTGCCTaGGACCCATGCAGGACTGTCTGGGTCAGCTGGTGCTTCACAGGT +
Preference number: 5 (lower is better)
Translates to: GCPPASASSYPKQLA*DPCRTVWVSWCFTG
Trigger: ACCTGTGAAGCACCAGCTGACCCAGACAGTCCTGCATGGGTCTCAGGCAAGCTGCTTCGGATATGAGCTTGCAGATGCGGGAGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS TCA 90 bp GACAAGGAATCCCAAGTCGTGCCTGCCGCAAATCTCCAGCTTCTGTaGAGCCCTCCCCTGAAATCAGCCTCGGCTGCCCTCCCGCATCTG +
Preference number: 5 (lower is better)
Translates to: DKESQVVPAANLQLL*SPPLKSASAALPHL
Trigger: CAGATGCGGGAGGGCAGCCGAGGCTGATTTCAGGGGAGGGCTTCACAGAAGCTGGAGATTTGCGGCAGGCACGACTTGGGATTCCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS GCA 90 bp GGTCCTCGGACCCTGGTCTCCAGGACAGCGTGTTCTGGAAGACTCTaGTGTGGGGGCCCATCTGAGCATGGTGTGCTCTTCCATAACGAC +
Preference number: 5 (lower is better)
Translates to: GPRTLVSRTACSGRL*CGGPSEHGVLFHND
Trigger: GTCGTTATGGAAGAGCACACCATGCTCAGATGGGCCCCCACAGCAGAGTCTTCCAGAACACGCTGTCCTGGAGACCAGGGTCCGAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp CCTGAGAGCCCTGGCGAGCGGCAAGCTAAAACCCACCAGCAGGAGTaGACACAAGGGCTCCATGGTGGACCGAGGGAAAGTGAAGGCTAT +
Preference number: 5 (lower is better)
Translates to: PESPGERQAKTHQQE*TQGLHGGPRESEGY
Trigger: ATAGCCTTCACTTTCCCTCGGTCCACCATGGAGCCCTTGTGTCCACTCCTGCTGGTGGGTTTTAGCTTGCCGCTCGCCAGGGCTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254667.8
ENST00000442830.5
CDS CCA 90 bp CGAGTGTTGCTCAGACTTGGGGAAAGCCCGTTCTTCGGGGGTTCCTaGACGGCTTCTCGTGAACACCTGCATGACAGGTGCAGAGCGCCT +
Preference number: 5 (lower is better)
Translates to: RVLLRLGESPFFGGS*TASREHLHDRCRAP
Trigger: AGGCGCTCTGCACCTGTCATGCAGGTGTTCACGAGAAGCCGTCCAGGAACCCCCGAAGAACGGGCTTTCCCCAAGTCTGAGCAACACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGGCCTTCTTCATGTTaGCCGGCAAGTTGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKWPSSC*PASCPS
Trigger: GGACGGGCAACTTGCCGGCAAACATGAAGAAGGCCA...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAACATATCCGAAGCAGCTaGCCTGAGACCCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: KGERCPGQWRGESCVLGKHIRSS*PETHAG
Trigger: TCCTGCATGGGTCTCAGGCAAGCTGCTTCGGATATG...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS GCA 90 bp CTTCTGTGCACTGAGCTCGGAGAGGAACAGAAGGCGAGAGCGCCCTaGTCCCAGGACGAGTTGGATTCACAGCCCACAGGGAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: LLCTELGEEQKARAP*SQDELDSQPTGRKK
Trigger: TTTCTTCCTCCCTGTGGGCTGTGAATCCAACTCGTCCTGGGAGCAGGGCGCTCTCGCCTTCTGTTCCTCTCCGAGCTCAGTGCACAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp GGCAAAGACAGTGACCAGGCTTTCACAGCGACTGGAATAGCAGCCTaGGTGGCATGCCCTTGCTACTTCAGCCTCAGCTTCCCCAGTCGC +
Preference number: 5 (lower is better)
Translates to: GKDSDQAFTATGIAA*VACPCYFSLSFPSR
Trigger: GCGACTGGGGAAGCTGAGGCTGAAGTAGCAAGGGCATGCCACCCAGGCTGCTATTCCAGTCGCTGTGAAAGCCTGGTCACTGTCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp GCCAGGGCCCTGCACACCTGTGTGGCGAAGGCATCGGGTTTGCTTTaGGAAGCTAGATCAGGGCAAGAGGAAGGCATGACTCACATCCGT +
Preference number: 5 (lower is better)
Translates to: ARALHTCVAKASGLL*EARSGQEEGMTHIR
Trigger: ACGGATGTGAGTCATGCCTTCCTCTTGCCCTGATCTAGCTTCCCAAAGCAAACCCGATGCCTTCGCCACACAGGTGTGCAGGGCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAATGGGAAAATACTTCTaGGGCCCTGAGGGTGACCTG +
Preference number: 5 (lower is better)
Translates to: KGERCPGQWRGESCVLGKMGKYF*GPEGDL
Trigger: CAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCAT...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TGGGTGGCAGACCAGTGTCCTGACTCTACCCTAGGCCCATTTCTTGTCCTCCTCTCCTCCCGAAACTGCTaGCAGTCGTCGGCGGATCTG +
Preference number: 5 (lower is better)
Translates to: WVADQCPDSTLGPFLVLLSSRNC*QSSADL
Trigger: CAGATCCGCCGACGACTGCAAGCAGTTTCGGGAGGA...GAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGGATGGTCGCAGACTTTaGCTCCCAGACCATTCTCCA +
Preference number: 5 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQDGRRL*LPDHSP
Trigger: TGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCATC...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAGTACTGCATATCCGTTaGAACCATCTGAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: KGERCPGQWRGESCVLGKVLHIR*NHLRAL
Trigger: CAGCGCCCTCAGATGGTTCAAACGGATATGCAGTAC...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGGTACTGCATATCCGTTaGAACCATCTGAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQVLHIR*NHLRAL
Trigger: CAGCGCCCTCAGATGGTTCAAACGGATATGCAGTAC...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCAGGTCAATCATGCCTTaGCCCTCGGCGGGAATCCCG +
Preference number: 5 (lower is better)
Translates to: KILSPSGIDSPSVRCSKARSIMP*PSAGIP
Trigger: CGGGATTCCCGCCGAGGGCAAAGGCATGATTGACCT...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAACAGCAAATGGTGCTTaGGGGTGTAACTCCGATGGC +
Preference number: 5 (lower is better)
Translates to: KGERCPGQWRGESCVLGKTANGA*GCNSDG
Trigger: GCCATCGGAGTTACACCCCAAAGCACCATTTGCTGT...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAATCGGCACTGGGCTGTTaGGGGGCTGTTTTGTTATGT +
Preference number: 5 (lower is better)
Translates to: KGERCPGQWRGESCVLGKSALGC*GAVLLC
Trigger: ACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGA...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS TCA 90 bp GGGCTCCATGGTGGACAGAGCACCGCGTTCTCAGTAGCCCCTAGGTaGTCAATTCGTTCAGACCCATGTCCACAGCACTGGAGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLHGGQSTAFSVAPR*SIRSDPCPQHWSLL
Trigger: CAGGAGACTCCAGTGCTGTGGACATGGGTCTGAACGAATTGATCACCTAGGGGCTACTGAGAACGCGGTGCTCTGTCCACCATGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS GCA 90 bp AGTGACCAGGCTTTCACAGCGACTGGAATAGCAGCCTGGGTGGCATaGCCTTGCTACTTCAGCCTCAGCTTCCCCAGTCGCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: SDQAFTATGIAAWVA*PCYFSLSFPSRCFA
Trigger: AGCAAAGCAGCGACTGGGGAAGCTGAGGCTGAAGTAGCAAGGGCATGCCACCCAGGCTGCTATTCCAGTCGCTGTGAAAGCCTGGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp TCGGAGAGGAACAGAAGGCGAGAGCGCCCTGCTCCCAGGACGAGTTaGATTCACAGCCCACAGGGAGGAAGAAAGGACAACGAGCAATGT +
Preference number: 5 (lower is better)
Translates to: SERNRRRERPAPRTS*IHSPQGGRKDNEQC
Trigger: ACATTGCTCGTTGTCCTTTCTTCCTCCCTGTGGGCTGTGAATCCAACTCGTCCTGGGAGCAGGGCGCTCTCGCCTTCTGTTCCTCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp GCAGACCTGCCCAGAACTCCATTCCCACCATCAACCGGAGCCTCCTaGCTTTGGTGGGTTTTATCGACTGGGATGAAGAGGGGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: ADLPRTPFPPSTGAS*LWWVLSTGMKRGLS
Trigger: AGAGAGCCCCCTCTTCATCCCAGTCGATAAAACCCACCAAAGCCAGGAGGCTCCGGTTGATGGTGGGAATGGAGTTCTGGGCAGGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp AGGGGTGCCCACACCCTCAACTCTGCCCTGCAGTCTTGGCCCACGTaGAGCTTGGCAGACCAAAGAGGGCGGCTTTCTTCTTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: RGAHTLNSALQSWPT*SLADQRGRLSSFSL
Trigger: AAGAGAAAAAGAAGAAAGCCGCCCTCTTTGGTCTGCCAAGCTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGAGGGTGTGGGCACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGCACCCTTTGCTGCTCTaGCTCCTCCAAGATTCCGTT +
Preference number: 5 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKHPLLL*LLQDSV
Trigger: AACGGAATCTTGGAGGAGCAAGAGCAGCAAAGGGTG...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTTCCTCCAGCCCGATCTaGTCGAAGTGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLSSSPI*SKWVVV
Trigger: CACCACCACCCACTTCGACAAGATCGGGCTGGAGGA...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGTGGCCTTCTTCATGTTaGCCGGCAAGTTGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWWPSSC*PASCPS
Trigger: GGACGGGCAACTTGCCGGCAAACATGAAGAAGGCCA...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCTGGCCTTCTTCATGTTaGCCGGCAAGTTGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: KILSPSGIDSPSVRCSKAWPSSC*PASCPS
Trigger: GGACGGGCAACTTGCCGGCAAACATGAAGAAGGCCA...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGAGGTCAATCATGCCTTaGCCCTCGGCGGGAATCCCG +
Preference number: 5 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLRSIMP*PSAGIP
Trigger: CGGGATTCCCGCCGAGGGCAAAGGCATGATTGACCT...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS TCA 90 bp AAGAGAAAGATGCTGCGTCGTGAGTCACACTCCTCCCGAAGTAAATaGAAGGCCCCGAAGGGGCCTGCGCACCCAGGTCACTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: KRKMLRRESHSSRSK*KAPKGPAHPGHWMQ
Trigger: TTGCATCCAGTGACCTGGGTGCGCAGGCCCCTTCGGGGCCTTTCATTTACTTCGGGAGGAGTGTGACTCACGACGCAGCATCTTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 90 bp ATGCCCTTGAGTAAGGAGAACGGTAGCAGCAGAGCCTCACATTGGTaGGCACGCCACGCACTGTGTACATGCACCGTTTGGGGGAGTAGG +
Preference number: 5 (lower is better)
Translates to: MPLSKENGSSRASHW*ARHALCTCTVWGSR
Trigger: CCTACTCCCCCAAACGGTGCATGTACACAGTGCGTGGCGTGCTCACCAATGTGAGGCTCTGCTGCTACCGTTCTCCTTACTCAAGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 90 bp TTCCACACTTCTAGGTTCCCCGAGAGCCAACAGCGCTCGGCACAGTaGTACCCACCAGGTGAGCCGGGAAAAGCTACTCCTGTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: FHTSRFPESQQRSAQ*YPPGEPGKATPVAH
Trigger: ATGAGCAACAGGAGTAGCTTTTCCCGGCTCACCTGGTGGGTATCACTGTGCCGAGCGCTGTTGGCTCTCGGGGAACCTAGAAGTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487428.1
CDS GCA 90 bp CTTCTCGTGAACACCTGCATGACAGGTGCAGAGCGCCTGCATCACTaGGTGCAGGTGGCTTTTGTCCCTGGCAGTGCTGTGATACTCAGA +
Preference number: 5 (lower is better)
Translates to: LLVNTCMTGAERLHH*VQVAFVPGSAVILR
Trigger: TCTGAGTATCACAGCACTGCCAGGGACAAAAGCCACCTGCACGCAGTGATGCAGGCGCTCTGCACCTGTCATGCAGGTGTTCACGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp GTCAGTGGGAGAATAAAAGGTTCACGGCACGGTCCCTGTCCTTCATaGAGACAGCTTCTTCCGTGGGGTCCAGGGAACTCCCTGACCTTC +
Preference number: 5 (lower is better)
Translates to: VSGRIKGSRHGPCPS*RQLLPWGPGNSLTF
Trigger: GAAGGTCAGGGAGTTCCCTGGACCCCACGGAAGAAGCTGTCTCCATGAAGGACAGGGACCGTGCCGTGAACCTTTTATTCTCCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442830.5
CDS CCA 90 bp AATCAAAGTGATACCCTGGTGAGGCCAATCACTGCCAGGAACAAGTaGGGCTCTCTGTGGACAGGGGGTTGTGGGGTGGCCTTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: NQSDTLVRPITARNK*GSLWTGGCGVALAV
Trigger: TACAGCCAAGGCCACCCCACAACCCCCTGTCCACAGAGAGCCCCACTTGTTCCTGGCAGTGATTGGCCTCACCAGGGTATCACTTTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGATGTTTGCCGGCAAGTaGCCCGTCCTCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKMFAGK*PVLMFS
Trigger: GGAGAACATGAGGACGGGCAACTTGCCGGCAAACAT...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GGCCATGAGGCTGTAATGACCTCCCCGCTAAAGGGCGAACGCTGTCCCGGACAGATACTGTTCCAGGGTTaGCACCATATGTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GHEAVMTSPLKGERCPGQILFQG*HHMWSL
Trigger: CAGAGACCACATATGGTGCAAACCCTGGAACAGTAT...CTGTCCGGGACAGCGTTCGCCCTTTAGCGGGGAGGTCATTACAGCCTCATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCGATGGCTGGTTTTGTaGTACCCAACGCCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLRWLVL*YPTPWV
Trigger: GACCCACGGCGTTGGGTACAACAAAACCAGCCATCG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGCGATGGCTGGTTTTGTaGTACCCAACGCCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKRWLVL*YPTPWV
Trigger: GACCCACGGCGTTGGGTACAACAAAACCAGCCATCG...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GTTGCCTGTCTGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCGAGTGGGCGAGAAGCTaGATTCCCTGTGAGCATCTA +
Preference number: 5 (lower is better)
Translates to: VACLLLLLLHGCDEVNHAEWARS*IPCEHL
Trigger: TAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTC...GGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAGATGAACTTTCCAGGTaGCACGGAGAAGATTCTGAG +
Preference number: 5 (lower is better)
Translates to: KGERCPGQWRGESCVLGKDELSR*HGEDSE
Trigger: CTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCATC...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTGTCTTCTTGCCAGCTTaGCCTCCACTCCTCCCACAC +
Preference number: 5 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLVFLPA*PPLLPH
Trigger: GTGTGGGAGGAGTGGAGGCAAAGCTGGCAAGAAGAC...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS TCA 90 bp TGTGTACATGCACCGTTTGGGGGAGTAGGATTGCCCCATCTCACATaGGGATACGAGGGAAAGATGAGGACGAGGGAGTCCCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: CVHAPFGGVGLPHLT*GYEGKMRTRESLRS
Trigger: GGACCTCAGGGACTCCCTCGTCCTCATCTTTCCCTCGTATCCTCATGTGAGATGGGGCAATCCTACTCCCCCAAACGGTGCATGTACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp GGACGTAAACGCACCAACGCAGCACGTCATGTCGGGAGGATGGTTTaGTGCCACGTCTTTTCTTATGTGCAGCGCCAGGCACTCACTTTC +
Preference number: 5 (lower is better)
Translates to: GRKRTNAARHVGRMV*CHVFSYVQRQALTF
Trigger: GAAAGTGAGTGCCTGGCGCTGCACATAAGAAAAGACGTGGCAGCAAACCATCCTCCCGACATGACGTGCTGCGTTGGTGCGTTTACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS GCA 90 bp GGCTTGGGGAGACAAGGAATGAGACAAGGAATCCCAAGTCGTGCCTaGCGCAAATCTCCAGCTTCTGTGAAGCCCTCCCCTGAAATCAGC +
Preference number: 5 (lower is better)
Translates to: GLGRQGMRQGIPSRA*RKSPASVKPSPEIS
Trigger: GCTGATTTCAGGGGAGGGCTTCACAGAAGCTGGAGATTTGCGGCAGGCACGACTTGGGATTCCTTGTCTCATTCCTTGTCTCCCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS CCA 90 bp AACAGGGACGTAAACGCACCAACGCAGCACGTCATGTCGGGAGGATaGTTTGCTGCCACGTCTTTTCTTATGTGCAGCGCCAGGCACTCA +
Preference number: 5 (lower is better)
Translates to: NRDVNAPTQHVMSGG*FAATSFLMCSARHS
Trigger: TGAGTGCCTGGCGCTGCACATAAGAAAAGACGTGGCAGCAAACCATCCTCCCGACATGACGTGCTGCGTTGGTGCGTTTACGTCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp CTGCCCAGAACTCCATTCCCACCATCAACCGGAGCCTCCTGGCTTTaGTGGGTTTTATCGACTGGGATGAAGAGGGGGCTCTCTGAACAT +
Preference number: 5 (lower is better)
Translates to: LPRTPFPPSTGASWL*WVLSTGMKRGLSEH
Trigger: ATGTTCAGAGAGCCCCCTCTTCATCCCAGTCGATAAAACCCACCAAAGCCAGGAGGCTCCGGTTGATGGTGGGAATGGAGTTCTGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp CCCACACCCTCAACTCTGCCCTGCAGTCTTGGCCCACGTGGAGCTTaGCAGACCAAAGAGGGCGGCTTTCTTCTTTTTCTCTTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: PTPSTLPCSLGPRGA*QTKEGGFLLFLFLP
Trigger: TGGCAAAAAGAGAAAAAGAAGAAAGCCGCCCTCTTTGGTCTGCCAAGCTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGAGGGTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCTCCTCCAAGATTCCGTaGGGCATCTTCTTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: KILSPSGIDSPSVRCSKASSKIP*GIFLSL
Trigger: CAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGA...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGCCAGATGGCAATGAGTaGAACTCCTCCCGAAACTGC +
Preference number: 5 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKPDGNE*NSSRNC
Trigger: GCAGTTTCGGGAGGAGTTCAACTCATTGCCATCTGG...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CCAGGCATAGCACTGGACCAGCCCAGGCCGCTGTGGCAGAACGGGAGGGGAGAATTCCTGTTTGGGACCTaGAGCTGCTATGAATTTATT +
Preference number: 5 (lower is better)
Translates to: PGIALDQPRPLWQNGRGEFLFGT*SCYEFI
Trigger: AATAAATTCATAGCAGCTCAAGGTCCCAAACAGGAA...TTCTCCCCTCCCGTTCTGCCACAGCGGCCTGGGCTGGTCCAGTGCTATGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCACAGCAAATGGTGCTTaGGGGTGTAACTCCGATGGC +
Preference number: 5 (lower is better)
Translates to: KILSPSGIDSPSVRCSKATANGA*GCNSDG
Trigger: GCCATCGGAGTTACACCCCAAAGCACCATTTGCTGT...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGGGCGAACGCTGTCCCGGACAGTGGAGGGGAGAGTCTTGCGTCCTGGGGAAAGTCCTGGGGTTGCATTaGCACACACTGTTAATGAAT +
Preference number: 5 (lower is better)
Translates to: KGERCPGQWRGESCVLGKVLGLH*HTLLMN
Trigger: ATTCATTAACAGTGTGTGCAAATGCAACCCCAGGAC...TTTCCCCAGGACGCAAGACTCTCCCCTCCACTGTCCGGGACAGCGTTCGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCTCGGCACTGGGCTGTTaGGGGGCTGTTTTGTTATGT +
Preference number: 5 (lower is better)
Translates to: KILSPSGIDSPSVRCSKASALGC*GAVLLC
Trigger: ACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGA...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTTTTCCCACTTGGTGAGCCTCCCGATTCCCACTCCCCTGCCCACTGCATGTGGGAAAGGATCACTCGGTaGAAGTCATCTGCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: FFPLGEPPDSHSPAHCMWERITR*KSSAVL
Trigger: GAGCACTGCAGATGACTTCAACCGAGTGATCCTTTC...CCACATGCAGTGGGCAGGGGAGTGGGAATCGGGAGGCTCACCAAGTGGGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS TCA 90 bp AGATCGACAGCATTCCCAGAGATGTGTTCTGCGTGGCAAAGACAGTaGCCAGGCTTTCACAGCGACTGGAATAGCAGCCTGGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: RSTAFPEMCSAWQRQ*PGFHSDWNSSLGGM
Trigger: CATGCCACCCAGGCTGCTATTCCAGTCGCTGTGAAAGCCTGGTCACTGTCTTTGCCACGCAGAACACATCTCTGGGAATGCTGTCGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp CCCAGAACTCCATTCCCACCATCAACCGGAGCCTCCTGGCTTTGGTaGGTTTTATCGACTGGGATGAAGAGGGGGCTCTCTGAACATTCT +
Preference number: 5 (lower is better)
Translates to: PRTPFPPSTGASWLW*VLSTGMKRGLSEHS
Trigger: AGAATGTTCAGAGAGCCCCCTCTTCATCCCAGTCGATAAAACCCACCAAAGCCAGGAGGCTCCGGTTGATGGTGGGAATGGAGTTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCACCCTTTGCTGCTCTaGCTCCTCCAAGATTCCGTT +
Preference number: 5 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLHPLLL*LLQDSV
Trigger: AACGGAATCTTGGAGGAGCAAGAGCAGCAAAGGGTG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp ATGGGCCCAGCGTGCACGGGGTTGAGCGTCTTTACTTTCTTGAGGAACTTCAGCCACCCTTTGCTGCTCTaGCTCCTCCAAGATTCCGTT +
Preference number: 5 (lower is better)
Translates to: MGPACTGLSVFTFLRNFSHPLLL*LLQDSV
Trigger: AACGGAATCTTGGAGGAGCAAGAGCAGCAAAGGGTG...GCTGAAGTTCCTCAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp ATGGGCCCAGCGTGCACGGGGTTGAGCGTCTTTACTTTCTTGAGGAACTTCAGCATGGGAAAATACTTCTaGGGCCCTGAGGGTGACCTG +
Preference number: 5 (lower is better)
Translates to: MGPACTGLSVFTFLRNFSMGKYF*GPEGDL
Trigger: CAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCAT...GCTGAAGTTCCTCAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGATGGTCGCAGACTTTaGCTCCCAGACCATTCTCCA +
Preference number: 5 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLDGRRL*LPDHSP
Trigger: TGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCATC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTAGCGTCTTTACTTTCTaGAGGAACTTCAGCATCCCA +
Preference number: 5 (lower is better)
Translates to: AVCSPGMQLVRMAVTKCASVFTF*RNFSIP
Trigger: TGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGCT...AGCACACTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp ATGGGCCCAGCGTGCACGGGGTTGAGCGTCTTTACTTTCTTGAGGAACTTCAGCGTACTGCATATCCGTTaGAACCATCTGAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: MGPACTGLSVFTFLRNFSVLHIR*NHLRAL
Trigger: CAGCGCCCTCAGATGGTTCAAACGGATATGCAGTAC...GCTGAAGTTCCTCAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACTCCTCCAGCCCGATCTaGTCGAAGTGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNSSSPI*SKWVVV
Trigger: CACCACCACCCACTTCGACAAGATCGGGCTGGAGGA...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTCCTCGGATCCCTGTGGAGTCTGCTTTGGGGCCGGGTTTCTCAAGTTTCTCTTATGTTTGCCGGCAAGTaGCCCGTCCTCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: FLGSLWSLLWGRVSQVSLMFAGK*PVLMFS
Trigger: GGAGAACATGAGGACGGGCAACTTGCCGGCAAACAT...AAGAGAAACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGGGATCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp CGTTCAGCAGTGTGCAGCCCAGGCATGCAGCTGGTGAGGATGGCGGTCACAAAGGTCCTGGGGTTGCATTaGCACACACTGTTAATGAAT +
Preference number: 5 (lower is better)
Translates to: RSAVCSPGMQLVRMAVTKVLGLH*HTLLMN
Trigger: ATTCATTAACAGTGTGTGCAAATGCAACCCCAGGAC...CTTTGTGACCGCCATCCTCACCAGCTGCATGCCTGGGCTGCACACTGCTGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGGCCCGGTGCCCCTCGACTTaGACTTCGAACTCTCAAATA +
Preference number: 5 (lower is better)
Translates to: KILSPSGIDSPSVRCSKARCPST*TSNSQI
Trigger: TATTTGAGAGTTCGAAGTCAAAGTCGAGGGGCACCG...GGCCTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CGTGGGTCAACGGGACCACCCAGCATTTACATCTCTTCTCGTTCAGCCAAGATACCTGTGGAGTCTGCTTaGGGGCCGGGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: RGSTGPPSIYISSRSAKIPVESA*GPGFSS
Trigger: ACTTGAGAAACCCGGCCCCAAAGCAGACTCCACAGG...TATCTTGGCTGAACGAGAAGAGATGTAAATGCTGGGTGGTCCCGTTGACCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp TGGGTGGCAGACCAGTGTCCTGACTCTACCCTAGGCCCATTTCTTGTCCTCCTCTCCAGATGGTGTTTGTaGAGCTGTGACTCTGTCGAG +
Preference number: 5 (lower is better)
Translates to: WVADQCPDSTLGPFLVLLSRWCL*SCDSVE
Trigger: CTCGACAGAGTCACAGCTCAACAAACACCATCTGGA...GAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp TGCTGCTGCTGCTTCTGCACGGCTGCGATGAGGTCAATCATGCCTTTGCCCTCGGTTTCCAGATGGTGTTaGTTGAGCTGTGACTCTGTC +
Preference number: 5 (lower is better)
Translates to: CCCCFCTAAMRSIMPLPSVSRWC*LSCDSV
Trigger: GACAGAGTCACAGCTCAACAAACACCATCTGGAAAC...CGAGGGCAAAGGCATGATTGACCTCATCGCAGCCGTGCAGAAGCAGCAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS TCA 90 bp GCTCTCTGTGGACAGGGGGTTGTGGGGTGGCCTTGGCTGTACATTTaGGTAATTCTTCATGTTGTGCAAAGCCCACCCAGATGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: ALCGQGVVGWPWLYI*VILHVVQSPPRCQS
Trigger: TGACTGGCATCTGGGTGGGCTTTGCACAACATGAAGAATTACTCAAATGTACAGCCAAGGCCACCCCACAACCCCCTGTCCACAGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 90 bp GCAAGAGTCAGAGTACCGGCCACGGATAACGACCATTTATGCCCTTaGGTAAGGAGAACGGTAGCAGCAGAGCCTCACATTGGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: ARVRVPATDNDHLCP*VRRTVAAEPHIGEH
Trigger: GTGCTCACCAATGTGAGGCTCTGCTGCTACCGTTCTCCTTACTCAAGGGCATAAATGGTCGTTATCCGTGGCCGGTACTCTGACTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 90 bp GAAGTCATACGGGATGATCTGGATGACCCTGGCCTTCTTCATGTTTaGCGGCAAGTTGCCCGTCCTCATGTTCTCCTTCATGATCCGGAC +
Preference number: 5 (lower is better)
Translates to: EVIRDDLDDPGLLHV*RQVARPHVLLHDPD
Trigger: GTCCGGATCATGAAGGAGAACATGAGGACGGGCAACTTGCCGGCAAACATGAAGAAGGCCAGGGTCATCCAGATCATCCCGTATGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254667.8
ENST00000306042.9
CDS GCA 90 bp CCGTTGGGCATCTTCTTGTCGCTGGTGCTGACCACAGCTTTCCTCTaGTTCCTGAACCTTAGAGACACAGGATGCGTTAGGTTTCCACAC +
Preference number: 5 (lower is better)
Translates to: PLGIFLSLVLTTAFL*FLNLRDTGCVRFPH
Trigger: GTGTGGAAACCTAACGCATCCTGTGTCTCTAAGGTTCAGGAAGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGAAGATGCCCAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487428.1
CDS-3UTR CAA 90 bp CACATCCACCTTCTGCTCCGCGTGCATCATGGCCATCATGGCATCGATCACAATCCAGATGGCAATGAGTaGAACTCCTCCCGAAACTGC +
Preference number: 5 (lower is better)
Translates to: HIHLLLRVHHGHHGIDHNPDGNE*NSSRNC
Trigger: GCAGTTTCGGGAGGAGTTCAACTCATTGCCATCTGG...ATTGTGATCGATGCCATGATGGCCATGATGCACGCGGAGCAGAAGGTGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAACCATCACGAACAGTTaGCCTTCCAAAAATGCTGCT +
Preference number: 5 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVTITNS*PSKNAA
Trigger: AGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGGT...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACCTCCGATGGCTGGTTTaGTTGTACCCAACGCCGTGG +
Preference number: 5 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDLRWLV*LYPTPW
Trigger: CCACGGCGTTGGGTACAACAAAACCAGCCATCGGAG...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTTCTGAGGGTGGTCTGGGCCAAACGACAGGCAGCTGGACAGCAAATGGTGCTTCGGTGCCCCTCGACTTaGACTTCGAACTCTCAAATA +
Preference number: 5 (lower is better)
Translates to: FLRVVWAKRQAAGQQMVLRCPST*TSNSQI
Trigger: TATTTGAGAGTTCGAAGTCAAAGTCGAGGGGCACCG...AAGCACCATTTGCTGTCCAGCTGCCTGTCGTTTGGCCCAGACCACCCTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATTTCTCTTTTTCCCACTaGGTGAGCCTCCCGATTCCC +
Preference number: 5 (lower is better)
Translates to: SLYREGERSTFSSVQPRHFSFSH*VSLPIP
Trigger: GGGAATCGGGAGGCTCACCAAGTGGGAAAAAGAGAA...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAATCCTCCAAGATTCCGTaGGGCATCTTCTTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQSSKIP*GIFLSL
Trigger: CAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGA...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CATATCCGTTTGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTCTCCTCCCGAAACTGCTaGCAGTCGTCGGCGGATCTG +
Preference number: 5 (lower is better)
Translates to: HIRLNHLRALITDSRHKFSSRNC*QSSADL
Trigger: CAGATCCGCCGACGACTGCAAGCAGTTTCGGGAGGA...GAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAACCAGATGGCAATGAGTaGAACTCCTCCCGAAACTGC +
Preference number: 5 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQPDGNE*NSSRNC
Trigger: GCAGTTTCGGGAGGAGTTCAACTCATTGCCATCTGG...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGACCCTAGAATGGTCATaGGGAAGGATGTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKTLEWS*GRMLGY
Trigger: ATATCCCAACATCCTTCCCAATGACCATTCTAGGGT...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATACCAGCCTGGGGGCTTaGCAGCCGTCGGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNTSLGA*QPSGSC
Trigger: ACAGCTCCCCGACGGCTGCAAAGCCCCCAGGCTGGT...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GATGGTGTAGTCGACCAAAACCACGCAGTCCTCCACGCACACCCGGATGTTTCCAGCGTCTTTACTTTCTaGAGGAACTTCAGCATCCCA +
Preference number: 5 (lower is better)
Translates to: DGVVDQNHAVLHAHPDVSSVFTF*RNFSIP
Trigger: TGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGCT...GGAAACATCCGGGTGTGCGTGGAGGACTGCGTGGTTTTGGTCGACTACACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACCCAGCGTGCACGGGGTaGAGCGTCTTTACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDPACTG*SVFTFL
Trigger: CAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGG...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACCCAGCGTGCACGGGGTaGAGCGTCTTTACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNPACTG*SVFTFL
Trigger: CAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGG...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AGAGCCGTGGAGTGGGCGAGAAGCTTGATTCCCTGTGAGCATCTATCAGAACAAGTACTGCATATCCGTTaGAACCATCTGAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: RAVEWARSLIPCEHLSEQVLHIR*NHLRAL
Trigger: CAGCGCCCTCAGATGGTTCAAACGGATATGCAGTAC...TTGTTCTGATAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTCCACGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGGAAAGGATCACTCGGTaGAAGTCATACGGGATGATC +
Preference number: 5 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLERITR*KSYGMI
Trigger: GATCATCCCGTATGACTTCAACCGAGTGATCCTTTC...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254667.8
ENST00000306042.9
CDS-3UTR CAA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGGTCAATCATGCCTTaGCCCTCGGCGGGAATCCCG +
Preference number: 5 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQRSIMP*PSAGIP
Trigger: CGGGATTCCCGCCGAGGGCAAAGGCATGATTGACCT...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS GCA 90 bp GTGCCCTTCCCAGTGGCGCGGTCGTTAGTGCAGGTCTTACAAAGGTaGACCAGTAGCTCCAACACAATTTTGAGTCTTTCAGAAGGAACA +
Preference number: 5 (lower is better)
Translates to: VPFPVARSLVQVLQR*TSSSNTILSLSEGT
Trigger: TGTTCCTTCTGAAAGACTCAAAATTGTGTTGGAGCTACTGGTGCACCTTTGTAAGACCTGCACTAACGACCGCGCCACTGGGAAGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS-3UTR CAA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACATGGGAAAATACTTCTaGGGCCCTGAGGGTGACCTG +
Preference number: 5 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDMGKYF*GPEGDL
Trigger: CAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCAT...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACCCAGATGGCAATGAGTaGAACTCCTCCCGAAACTGC +
Preference number: 5 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDPDGNE*NSSRNC
Trigger: GCAGTTTCGGGAGGAGTTCAACTCATTGCCATCTGG...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CATGCAGCTGGTGAGGATGGCGGTCACAAAGTGTGCTTTCGTCCTTCCAGCTGGGTAGTCTGTGTATTCTaGACCCCTTTTCATGGAAAG +
Preference number: 5 (lower is better)
Translates to: HAAGEDGGHKVCFRPSSWVVCVF*TPFHGK
Trigger: CTTTCCATGAAAAGGGGTCAAGAATACACAGACTAC...CCAGCTGGAAGGACGAAAGCACACTTTGTGACCGCCATCCTCACCAGCTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGACTCGCTCCAAAATGTaGCTGAGGGCTATGAATGTA +
Preference number: 5 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLTRSKM*LRAMNV
Trigger: TACATTCATAGCCCTCAGCAACATTTTGGAGCGAGT...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAATGACCTCCCCGCTAAAGATCACTATTTGGCATTaGAACCCAACTGCATGCAAC +
Preference number: 5 (lower is better)
Translates to: VIWGLGRGHEAVMTSPLKITIWH*NPTACN
Trigger: GTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGAT...CTTTAGCGGGGAGGTCATTACAGCCTCATGGCCTCTACCAAGGCCCCAGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS TCA 90 bp GGTATCCAGCCTCCCTCTCTGTCAAACTGGGCAAACCAAGTCATCTaGCTCGGGGCATTAAGTGAGGTGGCATCTGTCAGATTACTGTTA +
Preference number: 5 (lower is better)
Translates to: GIQPPSLSNWANQVI*LGALSEVASVRLLL
Trigger: TAACAGTAATCTGACAGATGCCACCTCACTTAATGCCCCGAGTCAGATGACTTGGTTTGCCCAGTTTGACAGAGAGGGAGGCTGGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCACCCTAGAATGGTCATaGGGAAGGATGTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCTLEWS*GRMLGY
Trigger: ATATCCCAACATCCTTCCCAATGACCATTCTAGGGT...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTGATGGTCGCAGACTTTaGCTCCCAGACCATTCTCCA +
Preference number: 5 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISDGRRL*LPDHSP
Trigger: TGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCATC...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp ATTACGGATTCGAGACACAAATTCAAACACATCCACCTTCTGCTCCGCGTGCATCCAGCGTGCACGGGGTaGAGCGTCTTTACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: ITDSRHKFKHIHLLLRVHPACTG*SVFTFL
Trigger: CAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGG...ATGCACGCGGAGCAGAAGGTGGATGTGTTTGAATTTGTGTCTCGAATCCGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTTCCTCCAGCCCGATCTaGTCGAAGTGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPSSSPI*SKWVVV
Trigger: CACCACCACCCACTTCGACAAGATCGGGCTGGAGGA...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCACCATCACGAACAGTTaGCCTTCCAAAAATGCTGCT +
Preference number: 5 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCTITNS*PSKNAA
Trigger: AGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGGT...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TGGGTGGCAGACCAGTGTCCTGACTCTACCCTAGGCCCATTTCTTGTCCTCCTCAAGTCCCCATTTACATaGTACCATCACGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: WVADQCPDSTLGPFLVLLKSPFT*YHHEQF
Trigger: AAACTGTTCGTGATGGTACAATGTAAATGGGGACTT...GAGGAGGACAAGAAATGGGCCTAGGGTAGAGTCAGGACACTGGTCTGCCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp CAAGGCCCAGGAGATCCTGTGATCTGGGGCCTTGGTAGAGGCCATGAGGCTGTAAGTTCATCTGAATGTTaGGATGGGAAGTTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: QGPGDPVIWGLGRGHEAVSSSEC*DGKFCV
Trigger: AACACAAAACTTCCCATCCAAACATTCAGATGAACT...TACAGCCTCATGGCCTCTACCAAGGCCCCAGATCACAGGATCTCCTGGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCGTCCTGGGGTTGCATTaGCACACACTGTTAATGAAT +
Preference number: 5 (lower is better)
Translates to: KGFKDSDRGLLDMNQSRCVLGLH*HTLLMN
Trigger: ATTCATTAACAGTGTGTGCAAATGCAACCCCAGGAC...GCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS TCA 90 bp ACAAAAAGGGAAATGGACCCTCAAGGTCTACTCTGTTCTGTTATCTaGAAAACTGAGGCTCCTGCAGCTGCCCAGCCTCACCAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: TKREMDPQGLLCSVI*KTEAPAAAQPHQVL
Trigger: GAGAACTTGGTGAGGCTGGGCAGCTGCAGGAGCCTCAGTTTTTCAGATAACAGAACAGAGTAGACCTTGAGGGTCCATTTCCCTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS-3UTR CAA 90 bp CTTCTGCTCCGCGTGCATCATGGCCATCATGGCATCGATCACAATGAAGGTGCCTTCCTGTTTGGGACCTaGAGCTGCTATGAATTTATT +
Preference number: 5 (lower is better)
Translates to: LLLRVHHGHHGIDHNEGAFLFGT*SCYEFI
Trigger: AATAAATTCATAGCAGCTCAAGGTCCCAAACAGGAA...GGCACCTTCATTGTGATCGATGCCATGATGGCCATGATGCACGCGGAGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp CATTCTCCAGAAGTCGTTAACCGTTTCCTGTTTGGGACCTTGAGCTGCTATGAAGATGGTCGCAGACTTTaGCTCCCAGACCATTCTCCA +
Preference number: 5 (lower is better)
Translates to: HSPEVVNRFLFGTLSCYEDGRRL*LPDHSP
Trigger: TGGAGAATGGTCTGGGAGCAAAAGTCTGCGACCATC...TTCATAGCAGCTCAAGGTCCCAAACAGGAAACGGTTAACGACTTCTGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495530.5
CDS-3UTR CAA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACATACTGTTCCAGGGTTaGCACCATATGTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDILFQG*HHMWSL
Trigger: CAGAGACCACATATGGTGCAAACCCTGGAACAGTAT...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CAGCAAATGGTGCTTTGGGGTGTAACTCCGATGGCTGGTTTTGTTGTACCCAACATACTGTTCCAGGGTTaGCACCATATGTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: QQMVLWGVTPMAGFVVPNILFQG*HHMWSL
Trigger: CAGAGACCACATATGGTGCAAACCCTGGAACAGTAT...GTTGGGTACAACAAAACCAGCCATCGGAGTTACACCCCAAAGCACCATTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTCTCCGATGGCTGGTTTaGTTGTACCCAACGCCGTGG +
Preference number: 5 (lower is better)
Translates to: YCVCKTLSSSECLDGKFCLRWLV*LYPTPW
Trigger: CCACGGCGTTGGGTACAACAAAACCAGCCATCGGAG...ACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCCGGTGCCCCTCGACTTTGTGTTTGGGGGCTGTTTaGTTATGTACAATGGACTTT +
Preference number: 5 (lower is better)
Translates to: DSDRGLLDMNQSRCPSTLCLGAV*LCTMDF
Trigger: AAAGTCCATTGTACATAACAAAACAGCCCCCAAACA...CAAAGTCGAGGGGCACCGGCTTTGGTTCATGTCTAGGAGCCCTCTGTCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATATCACTATTTGGCATTaGAACCCAACTGCATGCAAC +
Preference number: 5 (lower is better)
Translates to: SLYREGERSTFSSVQPRHITIWH*NPTACN
Trigger: GTTGCATGCAGTTGGGTTCAAATGCCAAATAGTGAT...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GAGAAGATTCTGAGTCCCTCAGGGATTGATTCCCCCAGCGTGAGGTGCTCCAAGTCTTCTAATCACTATTaGGCATTTGAACCCAACTGC +
Preference number: 5 (lower is better)
Translates to: EKILSPSGIDSPSVRCSKSSNHY*AFEPNC
Trigger: GCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAGA...CTTGGAGCACCTCACGCTGGGGGAATCAATCCCTGAGGGACTCAGAATCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS GCA 90 bp TTTACTGAGTATTCCCTTTGTAATTTTCCTTCTGAGGCTCGCGGCTaGCGGCACTCACACTATGTCACCAGAAACCAGAGCAAAGATCCA +
Preference number: 5 (lower is better)
Translates to: FTEYSLCNFPSEARG*RHSHYVTRNQSKDP
Trigger: TGGATCTTTGCTCTGGTTTCTGGTGACATAGTGTGAGTGCCGGCAGCCGCGAGCCTCAGAAGGAAAATTACAAAGGGAATACTCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp GGTGATCAATTCGTTCAGACCCATGTCCACAGCACTGGAGTCTCCTaGGCTGATAATTTGAACATTTCCAAGCAGGCTACTGATGCGAAA +
Preference number: 5 (lower is better)
Translates to: GDQFVQTHVHSTGVS*ADNLNISKQATDAK
Trigger: TTTCGCATCAGTAGCCTGCTTGGAAATGTTCAAATTATCAGCCCAGGAGACTCCAGTGCTGTGGACATGGGTCTGAACGAATTGATCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 90 bp TGTCTTCTTCTTATATGTGTGATTGGCATCCTAGATCTGTCCCCCTaGGAGCAGAGGGACCTCAGATCAACTATGCAACAGCTCTGGTAT +
Preference number: 5 (lower is better)
Translates to: CLLLICVIGILDLSP*EQRDLRSTMQQLWY
Trigger: ATACCAGAGCTGTTGCATAGTTGATCTGAGGTCCCTCTGCTCCCAGGGGGACAGATCTAGGATGCCAATCACACATATAAGAAGAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp TCCTCTGATAGCCACCGACACTCTACTAAGAGGCACATTAACAGCTaGTGCAGTAAGCCTCGGATTAGGCTGTGTGGAGAATTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SSDSHRHSTKRHINS*CSKPRIRLCGEFFS
Trigger: TGAGAAAAATTCTCCACACAGCCTAATCCGAGGCTTACTGCACCAGCTGTTAATGTGCCTCTTAGTAGAGTGTCGGTGGCTATCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATATCCTCCAAGATTCCGTaGGGCATCTTCTTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: LSSSECLDGKFCVEPPGISSKIP*GIFLSL
Trigger: CAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGA...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTGAAAGGATCACTCGGTaGAAGTCATACGGGATGATC +
Preference number: 5 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISERITR*KSYGMI
Trigger: GATCATCCCGTATGACTTCAACCGAGTGATCCTTTC...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254667.8
ENST00000306042.9
CDS-3UTR CAA 90 bp CACACACTGTTAATGAATAGGGGACGAACACTGCAACATGAGGGTGCGATCAGTGATGAACTTTCCAGGTaGCACGGAGAAGATTCTGAG +
Preference number: 5 (lower is better)
Translates to: HTLLMNRGRTLQHEGAISDELSR*HGEDSE
Trigger: CTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCATC...ACTGATCGCACCCTCATGTTGCAGTGTTCGTCCCCTATTCATTAACAGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TCATTGTACAGAGAAGGAGAGAGGAGCACGTTCAGCAGTGTGCAGCCCAGGCATTGTTTGGGGGCTGTTTaGTTATGTACAATGGACTTT +
Preference number: 5 (lower is better)
Translates to: SLYREGERSTFSSVQPRHCLGAV*LCTMDF
Trigger: AAAGTCCATTGTACATAACAAAACAGCCCCCAAACA...ATGCCTGGGCTGCACACTGCTGAACGTGCTCCTCTCTCCTTCTCTGTACAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS TCA 90 bp TTCAGACCCATGTCCACAGCACTGGAGTCTCCTGGGCTGATAATTTaGACATTTCCAAGCAGGCTACTGATGCGAAAGGCAATACATCAT +
Preference number: 5 (lower is better)
Translates to: FRPMSTALESPGLII*TFPSRLLMRKAIHH
Trigger: ATGATGTATTGCCTTTCGCATCAGTAGCCTGCTTGGAAATGTTCAAATTATCAGCCCAGGAGACTCCAGTGCTGTGGACATGGGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS GCA 90 bp TCTGATAGCCACCGACACTCTACTAAGAGGCACATTAACAGCTGGTaGAGTAAGCCTCGGATTAGGCTGTGTGGAGAATTTTTCTCACTT +
Preference number: 5 (lower is better)
Translates to: SDSHRHSTKRHINSW*SKPRIRLCGEFFSL
Trigger: AAGTGAGAAAAATTCTCCACACAGCCTAATCCGAGGCTTACTGCACCAGCTGTTAATGTGCCTCTTAGTAGAGTGTCGGTGGCTATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCGTCGTGGTTGTCTCGTaGCTGTCGGCAGTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PFKTLVCILHSYSTWRETVVVVS*LSAVVS
Trigger: CGAGACCACTGCCGACAGCAACGAGACAACCACGAC...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254667.8
CDS-3UTR CAA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGCCAGCGTGCACGGGGTaGAGCGTCTTTACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLPACTG*SVFTFL
Trigger: CAAGAAAGTAAAGACGCTCAACCCCGTGCACGCTGG...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTATGTTTGCCGGCAAGTaGCCCGTCCTCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: FPRQSILSGNGIITVIQCMFAGK*PVLMFS
Trigger: GGAGAACATGAGGACGGGCAACTTGCCGGCAAACAT...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TGTAAGACGCTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTACAGCAAATGGTGCTTaGGGGTGTAACTCCGATGGC +
Preference number: 5 (lower is better)
Translates to: CKTLSSSECLDGKFCVEPTANGA*GCNSDG
Trigger: GCCATCGGAGTTACACCCCAAAGCACCATTTGCTGT...AGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAGCGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGAGAGTGGGCGAGAAGCTaGATTCCCTGTGAGCATCTA +
Preference number: 5 (lower is better)
Translates to: WTETENFTEVPIYIVPSREWARS*IPCEHL
Trigger: TAGATGCTCACAGGGAATCAAGCTTCTCGCCCACTC...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS GCA 90 bp CTGCATAAACACAACCCAGGCCAGCATACGTACGTCTATGAAGGATaGGTTGATGTAGTCTGTGTATTCTTGACCCCTTTTCATGGAAAG +
Preference number: 5 (lower is better)
Translates to: LHKHNPGQHTYVYEG*VDVVCVFLTPFHGK
Trigger: CTTTCCATGAAAAGGGGTCAAGAATACACAGACTACATCAACGCATCCTTCATAGACGTACGTATGCTGGCCTGGGTTGTGTTTATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 90 bp ATTTTTCTCACTTACCAAACAGTGTCTTCTTCTTATATGTGTGATTaGCATCCTAGATCTGTCCCCCTGGGAGCAGAGGGACCTCAGATC +
Preference number: 5 (lower is better)
Translates to: IFLTYQTVSSSYMCD*HPRSVPLGAEGPQI
Trigger: GATCTGAGGTCCCTCTGCTCCCAGGGGGACAGATCTAGGATGCCAATCACACATATAAGAAGAAGACACTGTTTGGTAAGTGAGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS-3UTR CAA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATCACCCTTTGCTGCTCTaGCTCCTCCAAGATTCCGTT +
Preference number: 5 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNHPLLL*LLQDSV
Trigger: AACGGAATCTTGGAGGAGCAAGAGCAGCAAAGGGTG...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAAAGCGTCTTTACTTTCTaGAGGAACTTCAGCATCCCA +
Preference number: 5 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQSVFTF*RNFSIP
Trigger: TGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGCT...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GAGGGCACCCTGAAAAGGTCTACCTTAAAGGTACTTCTTGATACAAGAGATGCCACCATCACGAACAGTTaGCCTTCCAAAAATGCTGCT +
Preference number: 5 (lower is better)
Translates to: EGTLKRSTLKVLLDTRDATITNS*PSKNAA
Trigger: AGCAGCATTTTTGGAAGGCAAACTGTTCGTGATGGT...GGCATCTCTTGTATCAAGAAGTACCTTTAAGGTAGACCTTTTCAGGGTGCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp ACAATGGTGTCGGCACTGGGCTGTTTGGGGGCTGTTTTGTTATGTACAATGGACAAGTCCCCATTTACATaGTACCATCACGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: TMVSALGCLGAVLLCTMDKSPFT*YHHEQF
Trigger: AAACTGTTCGTGATGGTACAATGTAAATGGGGACTT...GTCCATTGTACATAACAAAACAGCCCCCAAACAGCCCAGTGCCGACACCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CTCAGTTCATCTGAATGTTTGGATGGGAAGTTTTGTGTTGAGCCTCCAGGCATAACTCGCTCCAAAATGTaGCTGAGGGCTATGAATGTA +
Preference number: 5 (lower is better)
Translates to: LSSSECLDGKFCVEPPGITRSKM*LRAMNV
Trigger: TACATTCATAGCCCTCAGCAACATTTTGGAGCGAGT...TATGCCTGGAGGCTCAACACAAAACTTCCCATCCAAACATTCAGATGAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GTGCTCCTCTGTACTGCGTGTGTAAGACGCTCAGTTCATCTGAATGTTTGGATGAAGTCCCCATTTACATaGTACCATCACGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: VLLCTACVRRSVHLNVWMKSPFT*YHHEQF
Trigger: AAACTGTTCGTGATGGTACAATGTAAATGGGGACTT...CATCCAAACATTCAGATGAACTGAGCGTCTTACACACGCAGTACAGAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATCGGTGCCCCTCGACTTaGACTTCGAACTCTCAAATA +
Preference number: 5 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNRCPST*TSNSQI
Trigger: TATTTGAGAGTTCGAAGTCAAAGTCGAGGGGCACCG...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp AGACCATTAAAGGGCTTCAAGGATTCTGACAGAGGGCTCCTAGACATGAACCAATTCCTGTTTGGGACCTaGAGCTGCTATGAATTTATT +
Preference number: 5 (lower is better)
Translates to: RPLKGFKDSDRGLLDMNQFLFGT*SCYEFI
Trigger: AATAAATTCATAGCAGCTCAAGGTCCCAAACAGGAA...TTGGTTCATGTCTAGGAGCCCTCTGTCAGAATCCTTGAAGCCCTTTAATGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGTACCATCACGACTTTGTGTTAGTATCTaGCAGAGGCACACTTCGCAT +
Preference number: 5 (lower is better)
Translates to: WTETENFTEVPIYIVPSRLCVSI*QRHTSH
Trigger: ATGCGAAGTGTGCCTCTGCAAGATACTAACACAAAG...TCGTGATGGTACAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTGATGAACTTTCCAGGTaGCACGGAGAAGATTCTGAG +
Preference number: 5 (lower is better)
Translates to: FPRQSILSGNGIITVIQCDELSR*HGEDSE
Trigger: CTCAGAATCTTCTCCGTGCAACCTGGAAAGTTCATC...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAAATGGGAAAATACTTCTaGGGCCCTGAGGGTGACCTG +
Preference number: 5 (lower is better)
Translates to: DIFLFILCTSARYLMAIEMGKYF*GPEGDL
Trigger: CAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCAT...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp TTTCCCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTACCCTAGAATGGTCATaGGGAAGGATGTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: FPRQSILSGNGIITVIQCTLEWS*GRMLGY
Trigger: ATATCCCAACATCCTTCCCAATGACCATTCTAGGGT...ACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATAGCGTCTTTACTTTCTaGAGGAACTTCAGCATCCCA +
Preference number: 5 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNSVFTF*RNFSIP
Trigger: TGGGATGCTGAAGTTCCTCAAGAAAGTAAAGACGCT...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGCTTTGTGTTAGTATCTaGCAGAGGCACACTTCGCAT +
Preference number: 5 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLLCVSI*QRHTSH
Trigger: ATGCGAAGTGTGCCTCTGCAAGATACTAACACAAAG...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS TCA 90 bp TCTCTCAGCGTAAAGAACAATGCTATTTCAGGCACGATGCTGCTTTaGAGAAATACCTTCTCATATCAAAGATCTCTTTGCCCCCTTCTA +
Preference number: 5 (lower is better)
Translates to: SLSVKNNAISGTMLL*RNTFSYQRSLCPLL
Trigger: TAGAAGGGGGCAAAGAGATCTTTGATATGAGAAGGTATTTCTTCAAAGCAGCATCGTGCCTGAAATAGCATTGTTCTTTACGCTGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS-3UTR CAA 90 bp GATAAACCACATGGACCGAAACTGAGAACTTTACAGAAGTCCCCATTTACATTGGTAGTCTGTGTATTCTaGACCCCTTTTCATGGAAAG +
Preference number: 5 (lower is better)
Translates to: DKPHGPKLRTLQKSPFTLVVCVF*TPFHGK
Trigger: CTTTCCATGAAAAGGGGTCAAGAATACACAGACTAC...CAATGTAAATGGGGACTTCTGTAAAGTTCTCAGTTTCGGTCCATGTGGTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GCACCATATGTGGTCTCTGAAGTCGTAAACTCTTCACAGCTTGAAATACATCTATTCCTGTTTGGGACCTaGAGCTGCTATGAATTTATT +
Preference number: 5 (lower is better)
Translates to: APYVVSEVVNSSQLEIHLFLFGT*SCYEFI
Trigger: AATAAATTCATAGCAGCTCAAGGTCCCAAACAGGAA...TAGATGTATTTCAAGCTGTGAAGAGTTTACGACTTCAGAGACCACATATGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp CCTTTTAAAACACTGGTATGCATTCTTCATTCATATAGCACATGGAGAGAAACCACTCGCTCCAAAATGTaGCTGAGGGCTATGAATGTA +
Preference number: 5 (lower is better)
Translates to: PFKTLVCILHSYSTWRETTRSKM*LRAMNV
Trigger: TACATTCATAGCCCTCAGCAACATTTTGGAGCGAGT...GGTTTCTCTCCATGTGCTATATGAATGAAGAATGCATACCAGTGTTTTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp CCCGTCAGTCAATCTTATCTGGTAATGGGATCATTACTGTTATCCAGTGTCAATTCTTCTAATCACTATTaGGCATTTGAACCCAACTGC +
Preference number: 5 (lower is better)
Translates to: PVSQSYLVMGSLLLSSVNSSNHY*AFEPNC
Trigger: GCAGTTGGGTTCAAATGCCAAATAGTGATTAGAAGA...ATTGACACTGGATAACAGTAATGATCCCATTACCAGATAAGATTGACTGACGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS-3UTR CAA 90 bp GCACCATATGTGGTCTCTGAAGTCGTAAACTCTTCACAGCTTGAAATACATCTAAGTTCATCTGAATGTTaGGATGGGAAGTTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: APYVVSEVVNSSQLEIHLSSSEC*DGKFCV
Trigger: AACACAAAACTTCCCATCCAAACATTCAGATGAACT...TAGATGTATTTCAAGCTGTGAAGAGTTTACGACTTCAGAGACCACATATGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479896.1
CDS-3UTR CAA 90 bp GATATCTTTTTGTTTATATTGTGCACATCTGCTAGGTACCTAATGGCCATAGAATGTTTGGGGGCTGTTTaGTTATGTACAATGGACTTT +
Preference number: 5 (lower is better)
Translates to: DIFLFILCTSARYLMAIECLGAV*LCTMDF
Trigger: AAAGTCCATTGTACATAACAAAACAGCCCCCAAACA...TTCTATGGCCATTAGGTACCTAGCAGATGTGCACAATATAAACAAAAAGATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000479896.1
CDS CCA 72 bp GGCGCGAAGAAGGGTCGCGGGGACGCGCAGAGGCCGTaGGTTCCTGAAGCCGCTCGCGCCGGCTCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GAKKGRGDAQRP*VPEAARAGSCR
Trigger: GCGGCAGGAGCCGGCGCGAGCGGCTTCAGGAACCCACGGCCTCTGCGCGTCCCCGCGACCCTTCTTCGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254667.8
CDS GCA 72 bp GAGCGAAGCCAGGCCAGGCCCAGGCTGGTTGCCACGTaGCCATCAGAGCCAGGGCCCTGCACACCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: ERSQARPRLVAT*PSEPGPCTPVW
Trigger: CCACACAGGTGTGCAGGGCCCTGGCTCTGATGGGCACGTGGCAACCAGCCTGGGCCTGGCCTGGCTTCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp CTATGGGGAGCGAAGCCAGGCCAGGCCCAGGCTGGTTaGCACGTGCCCATCAGAGCCAGGGCCCTGCACACC +
Preference number: 6 (lower is better)
Translates to: LWGAKPGQAQAG*HVPIRARALHT
Trigger: GGTGTGCAGGGCCCTGGCTCTGATGGGCACGTGGCAACCAGCCTGGGCCTGGCCTGGCTTCGCTCCCCATAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp GTCTCAGCTGAGTTCACCTGCATGGCCTCGGCTGGGTaGCTCAGGCCCCTCTGTGTAAGGGGGAGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: VSAEFTCMASAG*LRPLCVRGRRA
Trigger: GGCCCGCCTCCCCCTTACACAGAGGGGCCTGAGCCACCCAGCCGAGGCCATGCAGGTGAACTCAGCTGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS CAA 72 bp CCCGGGTCCGGAGGGCCTGAGGTCGTGGTTGTCTCGTaGCTGTCGGCAGTGGTCTCGTTGCCCCTGAGAGCC +
Preference number: 6 (lower is better)
Translates to: PGSGGPEVVVVS*LSAVVSLPLRA
Trigger: GGCTCTCAGGGGCAACGAGACCACTGCCGACAGCAACGAGACAACCACGACCTCAGGCCCTCCGGACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254667.8
ENST00000442830.5
ENST00000455661.5
ENST00000471218.5
CDS CCA 72 bp TGGCAGCTGGCGAGGGGCAGCCTGGTCCTCGGACCCTaGTCTCCAGGACAGCGTGTTCTGGAAGACTCTGCT +
Preference number: 6 (lower is better)
Translates to: WQLARGSLVLGP*SPGQRVLEDSA
Trigger: AGCAGAGTCTTCCAGAACACGCTGTCCTGGAGACCAGGGTCCGAGGACCAGGCTGCCCCTCGCCAGCTGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp CCTCCTCCAGCCCGATCTTGTCGAAGTGGGTGGTGGTaGCGTGCATGGTCTGCAGGTGCTTCTCCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: PPPARSCRSGWW*RAWSAGASPGR
Trigger: CCTCCCTGGAGAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGATCGGGCTGGAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS CAA 90 bp CAGAGAGGCCAGGGGTGCCCACACCCTCAACTCTGCCCTGCAGTCTaGGCCCACGTGGAGCTTGGCAGACCAAAGAGGGCGGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: QRGQGCPHPQLCPAV*AHVELGRPKRAAFF
Trigger: GAAGAAAGCCGCCCTCTTTGGTCTGCCAAGCTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGAGGGTGTGGGCACCCCTGGCCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp TCCAGCCCGATCTTGTCGAAGTGGGTGGTGGTGCCGTaGATGGTCTGCAGGTGCTTCTCCAGGGAGGACACG +
Preference number: 6 (lower is better)
Translates to: SSPILSKWVVVP*MVCRCFSREDT
Trigger: CGTGTCCTCCCTGGAGAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGATCGGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS GCA 72 bp AGGCTGGTTGCCACGTGCCCATCAGAGCCAGGGCCCTaGACACCTGTGTGGCGAAGGCATCGGGTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: RLVATCPSEPGP*TPVWRRHRVCF
Trigger: AAAGCAAACCCGATGCCTTCGCCACACAGGTGTGCAGGGCCCTGGCTCTGATGGGCACGTGGCAACCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp GCCCGATCTTGTCGAAGTGGGTGGTGGTGCCGTGCATaGTCTGCAGGTGCTTCTCCAGGGAGGACACGTCCA +
Preference number: 6 (lower is better)
Translates to: ARSCRSGWWCRA*SAGASPGRTRP
Trigger: TGGACGTGTCCTCCCTGGAGAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGATCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS CCA 72 bp ACTCCTCCTCCAGCCCGATCTTGTCGAAGTGGGTGGTaGTGCCGTGCATGGTCTGCAGGTGCTTCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: TPPPARSCRSGW*CRAWSAGASPG
Trigger: CCCTGGAGAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGATCGGGCTGGAGGAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS CCA 72 bp TCTGCTTGGCCCCAGCAAGCGAGTGTTGCTCAGACTTaGGGAAAGCCCGTTCTTCGGGGGTTCCTGGACGGC +
Preference number: 6 (lower is better)
Translates to: SAWPQQASVAQT*GKPVLRGFLDG
Trigger: GCCGTCCAGGAACCCCCGAAGAACGGGCTTTCCCCAAGTCTGAGCAACACTCGCTTGCTGGGGCCAAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 90 bp ACCAGGGGGCTTTCTCTCATTTCCATCTTGGTTCCCAGAGGTGACTaGGGATTCCCGGGGAGAGGTGAGGGCGGCCAAGCAGACCTGCCC +
Preference number: 6 (lower is better)
Translates to: TRGLSLISILVPRGD*GFPGRGEGGQADLP
Trigger: GGGCAGGTCTGCTTGGCCGCCCTCACCTCTCCCCGGGAATCCCAAGTCACCTCTGGGAACCAAGATGGAAATGAGAGAAAGCCCCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 90 bp GCCTCGGCTGCCCTCCCGCATCTGCAAGCTCATATCCGAAGCAGCTaGCCTGAGACCCATGCAGGACTGTCTGGGTCAGCTGGTGCTTCA +
Preference number: 6 (lower is better)
Translates to: ASAALPHLQAHIRSS*PETHAGLSGSAGAS
Trigger: TGAAGCACCAGCTGACCCAGACAGTCCTGCATGGGTCTCAGGCAAGCTGCTTCGGATATGAGCTTGCAGATGCGGGAGGGCAGCCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS TCA 72 bp ACTCCTCCCGAAACTGCTTGCAGTCGTCGGCGGATCTaGTACGGATCTCCTCCTCCAGGTGCTCCACGGGGA +
Preference number: 6 (lower is better)
Translates to: TPPETACSRRRI*YGSPPPGAPRG
Trigger: TCCCCGTGGAGCACCTGGAGGAGGAGATCCGTATCAGATCCGCCGACGACTGCAAGCAGTTTCGGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000442830.5
ENST00000455661.5
ENST00000467366.1
ENST00000471218.5
ENST00000479896.1
ENST00000495530.5
CDS TCA 72 bp CGCCGACACCAGGAGCCCGCTGATGAGCTCGGCTTCTaGCAACTAGACAACTGGCTGCAAGCGCTTACTCGG +
Preference number: 6 (lower is better)
Translates to: RRHQEPADELGF*QLDNWLQALTR
Trigger: CCGAGTAAGCGCTTGCAGCCAGTTGTCTAGTTGTCAGAAGCCGAGCTCATCAGCGGGCTCCTGGTGTCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442830.5
CDS TCA 72 bp ATGCTGCGTCGTGAGTCACACTCCTCCCGAAGTAAATaGAAGGCCCCGAAGGGGCCTGCGCACCCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: MLRRESHSSRSK*KAPKGPAHPGH
Trigger: GTGACCTGGGTGCGCAGGCCCCTTCGGGGCCTTTCATTTACTTCGGGAGGAGTGTGACTCACGACGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 72 bp TCCCAAGTCGTGCCTGCCGCAAATCTCCAGCTTCTGTaGAGCCCTCCCCTGAAATCAGCCTCGGCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: SQVVPAANLQLL*SPPLKSASAAL
Trigger: GAGGGCAGCCGAGGCTGATTTCAGGGGAGGGCTTCACAGAAGCTGGAGATTTGCGGCAGGCACGACTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS TCA 72 bp CCTCAAGGCCACAGCCTTTTCCTAGGTGGTCTCAGCTaGGTTCACCTGCATGGCCTCGGCTGGGTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: PQGHSLFLGGLS*VHLHGLGWVAQ
Trigger: CTGAGCCACCCAGCCGAGGCCATGCAGGTGAACTCAGCTGAGACCACCTAGGAAAAGGCTGTGGCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS GCA 72 bp TCTTCGGGGGTTCCTGGACGGCTTCTCGTGAACACCTaGATGACAGGTGCAGAGCGCCTGCATCACTGCGTG +
Preference number: 6 (lower is better)
Translates to: SSGVPGRLLVNT*MTGAERLHHCV
Trigger: CACGCAGTGATGCAGGCGCTCTGCACCTGTCATGCAGGTGTTCACGAGAAGCCGTCCAGGAACCCCCGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 90 bp CGGATCTCCTCCTCCAGGTGCTCCACGGGGATGGGAAAATACTTCTaGGGCCCTGAGGGTGACCTGCTGAGCAGCATCACCCTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: RISSSRCSTGMGKYF*GPEGDLLSSITLCC
Trigger: GCAGCAAAGGGTGATGCTGCTCAGCAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCATCCCCGTGGAGCACCTGGAGGAGGAGATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000442830.5
ENST00000455661.5
ENST00000467366.1
ENST00000479896.1
ENST00000487428.1
ENST00000495530.5
CDS TCA 72 bp CCCGCATCTGCAAGCTCATATCCGAAGCAGCTTGCCTaGGACCCATGCAGGACTGTCTGGGTCAGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: PASASSYPKQLA*DPCRTVWVSWC
Trigger: GCACCAGCTGACCCAGACAGTCCTGCATGGGTCTCAGGCAAGCTGCTTCGGATATGAGCTTGCAGATGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS TCA 72 bp GAGCCAACAGCGCTCGGCACAGTGATACCCACCAGGTaGGCCGGGAAAAGCTACTCCTGTTGCTCATGGCTG +
Preference number: 6 (lower is better)
Translates to: EPTALGTVIPTR*AGKSYSCCSWL
Trigger: CAGCCATGAGCAACAGGAGTAGCTTTTCCCGGCTCACCTGGTGGGTATCACTGTGCCGAGCGCTGTTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487428.1
CDS TCA 72 bp TCTAGGTTCCCCGAGAGCCAACAGCGCTCGGCACAGTaGTACCCACCAGGTGAGCCGGGAAAAGCTACTCCT +
Preference number: 6 (lower is better)
Translates to: SRFPESQQRSAQ*YPPGEPGKATP
Trigger: AGGAGTAGCTTTTCCCGGCTCACCTGGTGGGTATCACTGTGCCGAGCGCTGTTGGCTCTCGGGGAACCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487428.1
CDS GCA 72 bp ATCTTGTCGAAGTGGGTGGTGGTGCCGTGCATGGTCTaGAGGTGCTTCTCCAGGGAGGACACGTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: ILSKWVVVPCMV*RCFSREDTSSS
Trigger: AGAGCTGGACGTGTCCTCCCTGGAGAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS GCA 72 bp ACCCTGGTCTCCAGGACAGCGTGTTCTGGAAGACTCTaGTGTGGGGGCCCATCTGAGCATGGTGTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: TLVSRTACSGRL*CGGPSEHGVLF
Trigger: GAAGAGCACACCATGCTCAGATGGGCCCCCACAGCAGAGTCTTCCAGAACACGCTGTCCTGGAGACCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp TCCTGGACGGCTTCTCGTGAACACCTGCATGACAGGTaGAGAGCGCCTGCATCACTGCGTGCAGGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: SWTASREHLHDR*RAPASLRAGGF
Trigger: AAAGCCACCTGCACGCAGTGATGCAGGCGCTCTGCACCTGTCATGCAGGTGTTCACGAGAAGCCGTCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp GGGCCCTGCACACCTGTGTGGCGAAGGCATCGGGTTTaGTTTGGGAAGCTAGATCAGGGCAAGAGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GPCTPVWRRHRV*FGKLDQGKRKA
Trigger: TGCCTTCCTCTTGCCCTGATCTAGCTTCCCAAAGCAAACCCGATGCCTTCGCCACACAGGTGTGCAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp CCCTCCCGCATCTGCAAGCTCATATCCGAAGCAGCTTaGCTGAGACCCATGCAGGACTGTCTGGGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: PSRICKLISEAA*LRPMQDCLGQL
Trigger: CAGCTGACCCAGACAGTCCTGCATGGGTCTCAGGCAAGCTGCTTCGGATATGAGCTTGCAGATGCGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS GCA 72 bp GCTTCTGTGAAGCCCTCCCCTGAAATCAGCCTCGGCTaGCCTCCCGCATCTGCAAGCTCATATCCGAAGCAG +
Preference number: 6 (lower is better)
Translates to: ASVKPSPEISLG*PPASASSYPKQ
Trigger: CTGCTTCGGATATGAGCTTGCAGATGCGGGAGGGCAGCCGAGGCTGATTTCAGGGGAGGGCTTCACAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS CCA 72 bp TTCCTGAACTCCTCCTCCAGCCCGATCTTGTCGAAGTaGGTGGTGGTGCCGTGCATGGTCTGCAGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: FLNSSSSPILSK*VVVPCMVCRCF
Trigger: GAAGCACCTGCAGACCATGCACGGCACCACCACCCACTTCGACAAGATCGGGCTGGAGGAGGAGTTCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
ENST00000492479.1
CDS CCA 72 bp CTCAGACTTGGGGAAAGCCCGTTCTTCGGGGGTTCCTaGACGGCTTCTCGTGAACACCTGCATGACAGGTGC +
Preference number: 6 (lower is better)
Translates to: LRLGESPFFGGS*TASREHLHDRC
Trigger: GCACCTGTCATGCAGGTGTTCACGAGAAGCCGTCCAGGAACCCCCGAAGAACGGGCTTTCCCCAAGTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp ACGTGCCCATCAGAGCCAGGGCCCTGCACACCTGTGTaGCGAAGGCATCGGGTTTGCTTTGGGAAGCTAGAT +
Preference number: 6 (lower is better)
Translates to: TCPSEPGPCTPV*RRHRVCFGKLD
Trigger: ATCTAGCTTCCCAAAGCAAACCCGATGCCTTCGCCACACAGGTGTGCAGGGCCCTGGCTCTGATGGGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp CACACCCTCAACTCTGCCCTGCAGTCTTGGCCCACGTaGAGCTTGGCAGACCAAAGAGGGCGGCTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: HTLNSALQSWPT*SLADQRGRLSS
Trigger: AGAAGAAAGCCGCCCTCTTTGGTCTGCCAAGCTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGAGGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp CCAAGCCACGCCACGGGTGCCTTACACGGGATGATCTaGATGACCCTGGCCTTCTTCATGTTTGCCGGCAAG +
Preference number: 6 (lower is better)
Translates to: PSHATGALHGMI*MTLAFFMFAGK
Trigger: CTTGCCGGCAAACATGAAGAAGGCCAGGGTCATCCAGATCATCCCGTGTAAGGCACCCGTGGCGTGGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS CAA 72 bp TCCTCCAGGTGCTCCACGGGGATGGGAAAATACTTCTaGGGCCCTGAGGGTGACCTGCTGAGCAGCATCACC +
Preference number: 6 (lower is better)
Translates to: SSRCSTGMGKYF*GPEGDLLSSIT
Trigger: GGTGATGCTGCTCAGCAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCATCCCCGTGGAGCACCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000442830.5
ENST00000455661.5
ENST00000467366.1
ENST00000471218.5
ENST00000479896.1
ENST00000487428.1
ENST00000495530.5
CDS CAA 72 bp CACAGCGACTGGAATAGCAGCCTGGGTGGCATGCCCTaGCTACTTCAGCCTCAGCTTCCCCAGTCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: HSDWNSSLGGMP*LLQPQLPQSLL
Trigger: AAGCAGCGACTGGGGAAGCTGAGGCTGAAGTAGCAAGGGCATGCCACCCAGGCTGCTATTCCAGTCGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CAA 72 bp AGGGCCCTGCACACCTGTGTGGCGAAGGCATCGGGTTaGCTTTGGGAAGCTAGATCAGGGCAAGAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: RALHTCVAKASG*LWEARSGQEEG
Trigger: GCCTTCCTCTTGCCCTGATCTAGCTTCCCAAAGCAAACCCGATGCCTTCGCCACACAGGTGTGCAGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 72 bp GCCCTCCCGCATCTGCAAGCTCATATCCGAAGCAGCTaGCCTGAGACCCATGCAGGACTGTCTGGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: ALPHLQAHIRSS*PETHAGLSGSA
Trigger: AGCTGACCCAGACAGTCCTGCATGGGTCTCAGGCAAGCTGCTTCGGATATGAGCTTGCAGATGCGGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS CAA 90 bp CTCGGAGAGGAACAGAAGGCGAGAGCGCCCTGCTCCCAGGACGAGTaGGATTCACAGCCCACAGGGAGGAAGAAAGGACAACGAGCAATG +
Preference number: 6 (lower is better)
Translates to: LGEEQKARAPCSQDE*DSQPTGRKKGQRAM
Trigger: CATTGCTCGTTGTCCTTTCTTCCTCCCTGTGGGCTGTGAATCCAACTCGTCCTGGGAGCAGGGCGCTCTCGCCTTCTGTTCCTCTCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CAA 90 bp CGGATCTCCTCCTCCAGGTGCTCCACGGGGATGGGAAAATACTTCTaGGGCCCTGAGGGTGACCTGCTGAGCAGCATCACCCTTTGCTTG +
Preference number: 6 (lower is better)
Translates to: RISSSRCSTGMGKYF*GPEGDLLSSITLCL
Trigger: CAAGCAAAGGGTGATGCTGCTCAGCAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCATCCCCGTGGAGCACCTGGAGGAGGAGATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471218.5
CDS CAA 90 bp ATCAGAGCCAGGGCCCTGCACACCTGTGTGGCGAAGGCATCGGGTTaGCTTTGGGAAGCTAGATCAGGGCAAGAGGAAGGCATGACTCAC +
Preference number: 6 (lower is better)
Translates to: IRARALHTCVAKASG*LWEARSGQEEGMTH
Trigger: GTGAGTCATGCCTTCCTCTTGCCCTGATCTAGCTTCCCAAAGCAAACCCGATGCCTTCGCCACACAGGTGTGCAGGGCCCTGGCTCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp CGCACCAACGCAGCACGTCATGTCGGGAGGATGGTTTaGTGCCACGTCTTTTCTTATGTGCAGCGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: RTNAARHVGRMV*CHVFSYVQRQA
Trigger: TGCCTGGCGCTGCACATAAGAAAAGACGTGGCAGCAAACCATCCTCCCGACATGACGTGCTGCGTTGGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS GCA 72 bp TCCGGCCCACGCCCGCGCTTTGGGGAAAGAGAAAGATaGTGCGTCGTGAGTCACACTCCTCCCGAAGTAAAT +
Preference number: 6 (lower is better)
Translates to: SGPRPRFGERER*CVVSHTPPEVN
Trigger: ATTTACTTCGGGAGGAGTGTGACTCACGACGCAGCATCTTTCTCTTTCCCCAAAGCGCGGGCGTGGGCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp AACAGAAGGCGAGAGCGCCCTGCTCCCAGGACGAGTTaGATTCACAGCCCACAGGGAGGAAGAAAGGACAAC +
Preference number: 6 (lower is better)
Translates to: NRRRERPAPRTS*IHSPQGGRKDN
Trigger: GTTGTCCTTTCTTCCTCCCTGTGGGCTGTGAATCCAACTCGTCCTGGGAGCAGGGCGCTCTCGCCTTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CAA 72 bp ACGCACCAACGCAGCACGTCATGTCGGGAGGATGGTTaGCTGCCACGTCTTTTCTTATGTGCAGCGCCAGGC +
Preference number: 6 (lower is better)
Translates to: THQRSTSCREDG*LPRLFLCAAPG
Trigger: GCCTGGCGCTGCACATAAGAAAAGACGTGGCAGCAAACCATCCTCCCGACATGACGTGCTGCGTTGGTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CAA 90 bp CCAGGCTTTCACAGCGACTGGAATAGCAGCCTGGGTGGCATGCCCTaGCTACTTCAGCCTCAGCTTCCCCAGTCGCTGCTTTGCTTTCTT +
Preference number: 6 (lower is better)
Translates to: PGFHSDWNSSLGGMP*LLQPQLPQSLLCFL
Trigger: AAGAAAGCAAAGCAGCGACTGGGGAAGCTGAGGCTGAAGTAGCAAGGGCATGCCACCCAGGCTGCTATTCCAGTCGCTGTGAAAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CAA 90 bp GCCCACACCCTCAACTCTGCCCTGCAGTCTTGGCCCACGTGGAGCTaGGCAGACCAAAGAGGGCGGCTTTCTTCTTTTTCTCTTTTTGCC +
Preference number: 6 (lower is better)
Translates to: AHTLNSALQSWPTWS*ADQRGRLSSFSLFA
Trigger: GGCAAAAAGAGAAAAAGAAGAAAGCCGCCCTCTTTGGTCTGCCAAGCTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGAGGGTGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 72 bp GGTGGACAGAGCACCGCGTTCTCAGTAGCCCCTAGGTaGTCAATTCGTTCAGACCCATGTCCACAGCACTGG +
Preference number: 6 (lower is better)
Translates to: GGQSTAFSVAPR*SIRSDPCPQHW
Trigger: CCAGTGCTGTGGACATGGGTCTGAACGAATTGATCACCTAGGGGCTACTGAGAACGCGGTGCTCTGTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS TCA 72 bp GCACCGTTTGGGGGAGTAGGATTGCCCCATCTCACATaGGGATACGAGGGAAAGATGAGGACGAGGGAGTCC +
Preference number: 6 (lower is better)
Translates to: APFGGVGLPHLT*GYEGKMRTRES
Trigger: GGACTCCCTCGTCCTCATCTTTCCCTCGTATCCTCATGTGAGATGGGGCAATCCTACTCCCCCAAACGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp TGTCCCCCTGGGAGCAGAGGGACCTCAGATCAACTATaGAACAGCTCTGGTATCCAGCCTCCCTCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: CPPGSRGTSDQL*NSSGIQPPSLS
Trigger: TGACAGAGAGGGAGGCTGGATACCAGAGCTGTTGCATAGTTGATCTGAGGTCCCTCTGCTCCCAGGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp GGCCCACGCCCGCGCTTTGGGGAAAGAGAAAGATGCTaGGTCGTGAGTCACACTCCTCCCGAAGTAAATGAA +
Preference number: 6 (lower is better)
Translates to: GPRPRFGERERC*VVSHTPPEVNE
Trigger: TTCATTTACTTCGGGAGGAGTGTGACTCACGACGCAGCATCTTTCTCTTTCCCCAAAGCGCGGGCGTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp CCATTCCCACCATCAACCGGAGCCTCCTGGCTTTGGTaGGTTTTATCGACTGGGATGAAGAGGGGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: PFPPSTGASWLW*VLSTGMKRGLS
Trigger: AGAGAGCCCCCTCTTCATCCCAGTCGATAAAACCCACCAAAGCCAGGAGGCTCCGGTTGATGGTGGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp ACTCCATTCCCACCATCAACCGGAGCCTCCTGGCTTTaGTGGGTTTTATCGACTGGGATGAAGAGGGGGCTC +
Preference number: 6 (lower is better)
Translates to: TPFPPSTGASWL*WVLSTGMKRGL
Trigger: GAGCCCCCTCTTCATCCCAGTCGATAAAACCCACCAAAGCCAGGAGGCTCCGGTTGATGGTGGGAATGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 72 bp AGTAAGGAGAACGGTAGCAGCAGAGCCTCACATTGGTaGGCACGCCACGCACTGTGTACATGCACCGTTTGG +
Preference number: 6 (lower is better)
Translates to: SKENGSSRASHW*ARHALCTCTVW
Trigger: CCAAACGGTGCATGTACACAGTGCGTGGCGTGCTCACCAATGTGAGGCTCTGCTGCTACCGTTCTCCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 72 bp CCCCGTAGAGGTAGTACTCGAGTAAGGCTTGGTAGATaGACGTGTACTGCATCTGCAGAGAGGCCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: PRRGSTRVRLGR*TCTASAERPGV
Trigger: CACCCCTGGCCTCTCTGCAGATGCAGTACACGTTCATCTACCAAGCCTTACTCGAGTACTACCTCTACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp GTAAACGCACCAACGCAGCACGTCATGTCGGGAGGATaGTTTGCTGCCACGTCTTTTCTTATGTGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: VNAPTQHVMSGG*FAATSFLMCSA
Trigger: GGCGCTGCACATAAGAAAAGACGTGGCAGCAAACCATCCTCCCGACATGACGTGCTGCGTTGGTGCGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CCA 72 bp GCGCCTGCATCACTGCGTGCAGGTGGCTTTTGTCCCTaGCAGTGCTGTGATACTCAGAATGAACCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: APASLRAGGFCP*QCCDTQNEPVC
Trigger: ACAGACAGGTTCATTCTGAGTATCACAGCACTGCCAGGGACAAAAGCCACCTGCACGCAGTGATGCAGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CCA 72 bp TCAACTCTGCCCTGCAGTCTTGGCCCACGTGGAGCTTaGCAGACCAAAGAGGGCGGCTTTCTTCTTTTTCTC +
Preference number: 6 (lower is better)
Translates to: STLPCSLGPRGA*QTKEGGFLLFL
Trigger: GAGAAAAAGAAGAAAGCCGCCCTCTTTGGTCTGCCAAGCTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 72 bp CCAGATGGCAATGAGTTGAACTCCTCCCGAAACTGCTaGCAGTCGTCGGCGGATCTGATACGGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: PDGNELNSSRNC*QSSADLIRISS
Trigger: GGAGGAGATCCGTATCAGATCCGCCGACGACTGCAAGCAGTTTCGGGAGGAGTTCAACTCATTGCCATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000455661.5
ENST00000467366.1
ENST00000471218.5
ENST00000479896.1
ENST00000495530.5
CDS CAA 72 bp AACTCCATTCCCACCATCAACCGGAGCCTCCTGGCTTaGGTGGGTTTTATCGACTGGGATGAAGAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: NSIPTINRSLLA*VGFIDWDEEGA
Trigger: AGCCCCCTCTTCATCCCAGTCGATAAAACCCACCAAAGCCAGGAGGCTCCGGTTGATGGTGGGAATGGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 72 bp CTCAACTCTGCCCTGCAGTCTTGGCCCACGTGGAGCTaGGCAGACCAAAGAGGGCGGCTTTCTTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: LNSALQSWPTWS*ADQRGRLSSFS
Trigger: AGAAAAAGAAGAAAGCCGCCCTCTTTGGTCTGCCAAGCTCCACGTGGGCCAAGACTGCAGGGCAGAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 72 bp GCAGCATCACCCTTTGCTTGCTCCTCCAAGATTCCGTaGGGCATCTTCTTGTCGCTGGTGCTGACCACAGCT +
Preference number: 6 (lower is better)
Translates to: AASPFACSSKIP*GIFLSLVLTTA
Trigger: AGCTGTGGTCAGCACCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGAGCAAGCAAAGGGTGATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471218.5
CDS CAA 90 bp ACCCTTTGCTGCTCTTGCTCCTCCAAGATTCCGTTGGGCATCTTCTaGTCGCTGGTGCTGACCACAGCTTTCCTCTGCTTCCTGAACCTG +
Preference number: 6 (lower is better)
Translates to: TLCCSCSSKIPLGIF*SLVLTTAFLCFLNL
Trigger: CAGGTTCAGGAAGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGAGCAAGAGCAGCAAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254667.8
ENST00000442830.5
ENST00000455661.5
CDS CAA 90 bp ACCCTTTGCTGCTCTTGCTCCTCCAAGATTCCGTTGGGCATCTTCTaGTCGCTGGTGCTGACCACAGCTTTCCTCTGCTTCCTGAACCAG +
Preference number: 6 (lower is better)
Translates to: TLCCSCSSKIPLGIF*SLVLTTAFLCFLNQ
Trigger: CTGGTTCAGGAAGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGAGCAAGAGCAGCAAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306042.9
ENST00000479896.1
ENST00000495530.5
CDS CAA 90 bp GGCTCTCTGTGGACAGGGGGTTGTGGGGTGGCCTTGGCTGTACATTaGAGTAATTCTTCATGTTGTGCAAAGCCCACCCAGATGCCAGTC +
Preference number: 6 (lower is better)
Translates to: GSLWTGGCGVALAVH*SNSSCCAKPTQMPV
Trigger: GACTGGCATCTGGGTGGGCTTTGCACAACATGAAGAATTACTCAAATGTACAGCCAAGGCCACCCCACAACCCCCTGTCCACAGAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 90 bp GCATCACCCTTTGCTTGCTCCTCCAAGATTCCGTTGGGCATCTTCTaGTCGCTGGTGCTGACCACAGCTTTCCTCTGCTTCCTGAACCTG +
Preference number: 6 (lower is better)
Translates to: ASPFACSSKIPLGIF*SLVLTTAFLCFLNL
Trigger: CAGGTTCAGGAAGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGAGCAAGCAAAGGGTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471218.5
CDS TCA 72 bp GCATTCCCAGAGATGTGTTCTGCGTGGCAAAGACAGTaGCCAGGCTTTCACAGCGACTGGAATAGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: AFPEMCSAWQRQ*PGFHSDWNSSL
Trigger: CAGGCTGCTATTCCAGTCGCTGTGAAAGCCTGGTCACTGTCTTTGCCACGCAGAACACATCTCTGGGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS GCA 72 bp TGTCCAGATGGCAATGAGTTGAACTCCTCCCGAAACTaGTTGCAGTCGTCGGCGGATCTGATACGGATCTCC +
Preference number: 6 (lower is better)
Translates to: CPDGNELNSSRN*LQSSADLIRIS
Trigger: GGAGATCCGTATCAGATCCGCCGACGACTGCAAGCAGTTTCGGGAGGAGTTCAACTCATTGCCATCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000455661.5
ENST00000467366.1
ENST00000471218.5
ENST00000479896.1
ENST00000495530.5
CDS GCA 72 bp CGGGATGATCTGGATGACCCTGGCCTTCTTCATGTTTaGCGGCAAGTTGCCCGTCCTCATGTTCTCCTTCAT +
Preference number: 6 (lower is better)
Translates to: RDDLDDPGLLHV*RQVARPHVLLH
Trigger: ATGAAGGAGAACATGAGGACGGGCAACTTGCCGGCAAACATGAAGAAGGCCAGGGTCATCCAGATCATCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
CDS GCA 72 bp AGACAAGGAATGAGACAAGGAATCCCAAGTCGTGCCTaGCGCAAATCTCCAGCTTCTGTGAAGCCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: RQGMRQGIPSRA*RKSPASVKPSP
Trigger: AGGGGAGGGCTTCACAGAAGCTGGAGATTTGCGGCAGGCACGACTTGGGATTCCTTGTCTCATTCCTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463727.1
ENST00000479896.1
CDS CAA 72 bp ATCACCCTTTGCTGCTCTTGCTCCTCCAAGATTCCGTaGGGCATCTTCTTGTCGCTGGTGCTGACCACAGCT +
Preference number: 6 (lower is better)
Translates to: ITLCCSCSSKIP*GIFLSLVLTTA
Trigger: AGCTGTGGTCAGCACCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGAGCAAGAGCAGCAAAGGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000442830.5
ENST00000455661.5
ENST00000467366.1
ENST00000479896.1
ENST00000487428.1
ENST00000495530.5
CDS CAA 72 bp TGGATGACCCTGGCCTTCTTCATGTTTGCCGGCAAGTaGCCCGTCCTCATGTTCTCCTTCATGATCCGGACA +
Preference number: 6 (lower is better)
Translates to: WMTLAFFMFAGK*PVLMFSFMIRT
Trigger: TGTCCGGATCATGAAGGAGAACATGAGGACGGGCAACTTGCCGGCAAACATGAAGAAGGCCAGGGTCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254667.8
ENST00000306042.9
ENST00000463727.1
ENST00000479896.1
CDS CAA 90 bp ACTGGGATGAAGAGGGGGCTCTCTGAACATTCTCCTGTAGGGTTCTaGGGGCCTGGCTCAGTCACTGACATTTGTGTTCACATCAGCCCT +
Preference number: 6 (lower is better)
Translates to: TGMKRGLSEHSPVGF*GPGSVTDICVHISP
Trigger: AGGGCTGATGTGAACACAAATGTCAGTGACTGAGCCAGGCCCCAAGAACCCTACAGGAGAATGTTCAGAGAGCCCCCTCTTCATCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 90 bp ACCCTTTGCTGCTCTTGCTCCTCCAAGATTCCGTTGGGCATCTTCTaGTCGCTGGTGCTGACCACAGCTTTCCTCTGCTTCCTGAACCTT +
Preference number: 6 (lower is better)
Translates to: TLCCSCSSKIPLGIF*SLVLTTAFLCFLNL
Trigger: AAGGTTCAGGAAGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGAAGATGCCCAACGGAATCTTGGAGGAGCAAGAGCAGCAAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487428.1
CDS TCA 72 bp CCTCCCTCTCTGTCAAACTGGGCAAACCAAGTCATCTaGCTCGGGGCATTAAGTGAGGTGGCATCTGTCAGA +
Preference number: 6 (lower is better)
Translates to: PPSLSNWANQVI*LGALSEVASVR
Trigger: TCTGACAGATGCCACCTCACTTAATGCCCCGAGTCAGATGACTTGGTTTGCCCAGTTTGACAGAGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 72 bp TGGGAAAATACTTCTTGGGCCCTGAGGGTGACCTGCTaGGCAGCATCACCCTTTGCTTGCTCCTCCAAGATT +
Preference number: 6 (lower is better)
Translates to: WENTSWALRVTC*AASPFACSSKI
Trigger: AATCTTGGAGGAGCAAGCAAAGGGTGATGCTGCTCAGCAGGTCACCCTCAGGGCCCAAGAAGTATTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471218.5
CDS CCA 72 bp GAGCAGAGGGACCTCAGATCAACTATGCAACAGCTCTaGTATCCAGCCTCCCTCTCTGTCAAACTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: EQRDLRSTMQQL*YPASLSVKLGK
Trigger: TTTGCCCAGTTTGACAGAGAGGGAGGCTGGATACCAGAGCTGTTGCATAGTTGATCTGAGGTCCCTCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 72 bp TGGACAGGGGGTTGTGGGGTGGCCTTGGCTGTACATTaGAGTAATTCTTCATGTTGTGCAAAGCCCACCCAG +
Preference number: 6 (lower is better)
Translates to: WTGGCGVALAVH*SNSSCCAKPTQ
Trigger: CTGGGTGGGCTTTGCACAACATGAAGAATTACTCAAATGTACAGCCAAGGCCACCCCACAACCCCCTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 72 bp AGAGTACCGGCCACGGATAACGACCATTTATGCCCTTaGGTAAGGAGAACGGTAGCAGCAGAGCCTCACATT +
Preference number: 6 (lower is better)
Translates to: RVPATDNDHLCP*VRRTVAAEPHI
Trigger: AATGTGAGGCTCTGCTGCTACCGTTCTCCTTACTCAAGGGCATAAATGGTCGTTATCCGTGGCCGGTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp TCGGGAGGATGGTTTGCTGCCACGTCTTTTCTTATGTaGAGCGCCAGGCACTCACTTTCATTCATCCCAAGA +
Preference number: 6 (lower is better)
Translates to: SGGWFAATSFLM*SARHSLSFIPR
Trigger: TCTTGGGATGAATGAAAGTGAGTGCCTGGCGCTGCACATAAGAAAAGACGTGGCAGCAAACCATCCTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS GCA 72 bp TATTCCCTTTGTAATTTTCCTTCTGAGGCTCGCGGCTaGCGGCACTCACACTATGTCACCAGAAACCAGAGC +
Preference number: 6 (lower is better)
Translates to: YSLCNFPSEARG*RHSHYVTRNQS
Trigger: GCTCTGGTTTCTGGTGACATAGTGTGAGTGCCGGCAGCCGCGAGCCTCAGAAGGAAAATTACAAAGGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS GCA 72 bp ATCTTCTTGTCGCTGGTGCTGACCACAGCTTTCCTCTaGTTCCTGAACCTTAGAGACACAGGATGCGTTAGG +
Preference number: 6 (lower is better)
Translates to: IFLSLVLTTAFL*FLNLRDTGCVR
Trigger: CCTAACGCATCCTGTGTCTCTAAGGTTCAGGAAGCAGAGGAAAGCTGTGGTCAGCACCAGCGACAAGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487428.1
CDS CCA 72 bp AGCCACCGACACTCTACTAAGAGGCACATTAACAGCTaGTGCAGTAAGCCTCGGATTAGGCTGTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: SHRHSTKRHINS*CSKPRIRLCGE
Trigger: TTCTCCACACAGCCTAATCCGAGGCTTACTGCACCAGCTGTTAATGTGCCTCTTAGTAGAGTGTCGGTGGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 72 bp AGATCAGGGCAAGAGGAAGGCATGACTCACATCCGTTaGAACCATCTGAGGGCGCTGATTACGGATTCGAGA +
Preference number: 6 (lower is better)
Translates to: RSGQEEGMTHIR*NHLRALITDSR
Trigger: TCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATGTGAGTCATGCCTTCCTCTTGCCCTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 90 bp TGGGAAGCTAGATCAGGGCAAGAGGAAGGCATGACTCACATCCGTTaGAACCATCTGAGGGCGCTGATTACGGATTCGAGACACAAATTC +
Preference number: 6 (lower is better)
Translates to: WEARSGQEEGMTHIR*NHLRALITDSRHKF
Trigger: GAATTTGTGTCTCGAATCCGTAATCAGCGCCCTCAGATGGTTCAAACGGATGTGAGTCATGCCTTCCTCTTGCCCTGATCTAGCTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS GCA 72 bp CACCGACACTCTACTAAGAGGCACATTAACAGCTGGTaGAGTAAGCCTCGGATTAGGCTGTGTGGAGAATTT +
Preference number: 6 (lower is better)
Translates to: HRHSTKRHINSW*SKPRIRLCGEF
Trigger: AAATTCTCCACACAGCCTAATCCGAGGCTTACTGCACCAGCTGTTAATGTGCCTCTTAGTAGAGTGTCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 90 bp GTTCAGACCCATGTCCACAGCACTGGAGTCTCCTGGGCTGATAATTaGAACATTTCCAAGCAGGCTACTGATGCGAAAGGCAATACATCA +
Preference number: 6 (lower is better)
Translates to: VQTHVHSTGVSWADN*NISKQATDAKGNTS
Trigger: TGATGTATTGCCTTTCGCATCAGTAGCCTGCTTGGAAATGTTCAAATTATCAGCCCAGGAGACTCCAGTGCTGTGGACATGGGTCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS GCA 72 bp CACAACCCAGGCCAGCATACGTACGTCTATGAAGGATaGGTTGATGTAGTCTGTGTATTCTTGACCCCTTTT +
Preference number: 6 (lower is better)
Translates to: HNPGQHTYVYEG*VDVVCVFLTPF
Trigger: AAAAGGGGTCAAGAATACACAGACTACATCAACGCATCCTTCATAGACGTACGTATGCTGGCCTGGGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS CAA 72 bp CAGACCATTCTCCAGAAGTCGTTAACCGTTTCCTGTTaGGGACCTGTGTGTAGAGGACAATTTCGAAGTCAA +
Preference number: 6 (lower is better)
Translates to: QTILQKSLTVSC*GPVCRGQFRSQ
Trigger: TTGACTTCGAAATTGTCCTCTACACACAGGTCCCAAACAGGAAACGGTTAACGACTTCTGGAGAATGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492479.1
CDS GCA 72 bp GGAATTTCTGAAACAATCATTGAAAACCATCTCTACTaGAGACAGCCAGCGCTACTGACTGCAACAGGATTT +
Preference number: 6 (lower is better)
Translates to: GISETIIENHLY*RQPALLTATGF
Trigger: AAATCCTGTTGCAGTCAGTAGCGCTGGCTGTCTGCAGTAGAGATGGTTTTCAATGATTGTTTCAGAAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CAA 90 bp CTCTCTCAGCGTAAAGAACAATGCTATTTCAGGCACGATGCTGCTTaGAAGAAATACCTTCTCATATCAAAGATCTCTTTGCCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: LSQRKEQCYFRHDAA*KKYLLISKISLPPS
Trigger: AGAAGGGGGCAAAGAGATCTTTGATATGAGAAGGTATTTCTTCAAAGCAGCATCGTGCCTGAAATAGCATTGTTCTTTACGCTGAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CAA 72 bp ACTTGTCCATTTCTTGTAACTGAAACTTTAAACCCGTaGAACACCAAATTCCCATTTCCTCCTCTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: TCPFLVTETLNP*NTKFPFPPLSA
Trigger: CGCTGAGAGAGGAGGAAATGGGAATTTGGTGTTCAACGGGTTTAAAGTTTCAGTTACAAGAAATGGACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS TCA 72 bp ATACATACCAAAATACAAGCACTAAAAATATTGCGCTaGAGGAGTAAATGGAATGTGGCCAGGCAAGCAATC +
Preference number: 6 (lower is better)
Translates to: IHTKIQALKILR*RSKWNVARQAI
Trigger: GATTGCTTGCCTGGCCACATTCCATTTACTCCTTCAGCGCAATATTTTTAGTGCTTGTATTTTGGTATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463727.1
CDS TCA 72 bp GTAAAGAACAATGCTATTTCAGGCACGATGCTGCTTTaGAGAAATACCTTCTCATATCAAAGATCTCTTTGC +
Preference number: 6 (lower is better)
Translates to: VKNNAISGTMLL*RNTFSYQRSLC
Trigger: GCAAAGAGATCTTTGATATGAGAAGGTATTTCTTCAAAGCAGCATCGTGCCTGAAATAGCATTGTTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455661.5
CDS CAA 72 bp TTATCTTCCTTTAGTTATTACAAAAAGGGTCCCACCTaGCTAACTTTAATCCATTGCTACAAGCTTGCAAAA +
Preference number: 6 (lower is better)
Translates to: LSSFSYYKKGPT*LTLIHCYKLAK
Trigger: TTTTGCAAGCTTGTAGCAATGGATTAAAGTTAGCAAGGTGGGACCCTTTTTGTAATAACTAAAGGAAGATAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463727.1